NO11G01510, NO11G01510 (gene) Nannochloropsis oceanica

Overview
NameNO11G01510
Unique NameNO11G01510
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2476
Alignment locationchr11:507358..509833 -

Link to JBrowse

Properties
Property NameValue
DescriptionTranslation initiation factor eif-2b subunit beta
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr11genomechr11:507358..509833 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0044237cellular metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR037171NagB/RpiA_transferase-like
IPR000649IF-2B-related
Vocabulary: Molecular Function
TermDefinition
GO:0008135translation factor activity, RNA binding
Homology
[Close]
BLAST of NO11G01510 vs. NCBI_GenBank
Match: EWM25071.1 (translation initiation factor eif-2b subunit beta [Nannochloropsis gaditana])

HSP 1 Score: 590.1 bits (1520), Expect = 5.100e-165
Identity = 300/364 (82.42%), Postives = 324/364 (89.01%), Query Frame = 0 
Query:   39 MDSSVTPPKKDLDTWLSTWPNVHGQFRFLVTRLQRRKVVGSLQCAKMTIELLKTVMGTCRWSTAAELMRIVKRVGKALIDAQPLELVIGNIVRRILFLIRDEHANKLREDRARHGLATTSLSEDGEAADELNVAVPQLRMAVMEAIGELQLELDNAYGEICELALEHIHANEVILTVGRSRTVEKFLKEAAERRRIFEVIVAESAPTLAGREMAKSLAAGGIETTVISDCAVYAIMARVNQVLLPCRAMIANGGLIAPCGGHMAALAAKELSVPVVCVTGLFKLSPVYRHDQDAFNDLKSPSSLIPYPEAAAMAEGTVDILNPAYDYVPPELVDLYITNTGGHQTSYVYRLLGEYYHHDDSNLD 403
            M SSV P  KDLD WLSTWP+VHGQ+R L+T LQRRKV GSL CAKMTIELLK VMGTCRW+TAAELM +VKRVGKAL+DAQPL+LV+GN+VRRILF+IR+EH NKLRE RAR G AT SLS+DGEA +EL  +VP LR  VMEAIGELQLELDN Y EICELALEHIHANEVILTVGRS+TVE FL+EAAERRR FEVIVAESAP +AGREMAKSLAA GIETTVISD AVYAIMARVNQVLLPCRA+IANGGLIAPCGGHMAALAAKELSVPVVCVTGLFKLSPVYRHDQDAFNDL+SPS+LI Y +   + E   D LNPAYDYVPPELVDLYITNTGGHQT Y+YRLLGEYYHHDDS+LD
Sbjct:    1 MKSSVAPSGKDLDAWLSTWPHVHGQYRSLITSLQRRKVAGSLPCAKMTIELLKAVMGTCRWTTAAELMSVVKRVGKALVDAQPLQLVVGNVVRRILFIIREEHKNKLREVRAREGGATASLSDDGEAGNELEASVPGLRTGVMEAIGELQLELDNVYNEICELALEHIHANEVILTVGRSKTVETFLREAAERRRAFEVIVAESAPDIAGREMAKSLAAAGIETTVISDSAVYAIMARVNQVLLPCRALIANGGLIAPCGGHMAALAAKELSVPVVCVTGLFKLSPVYRHDQDAFNDLRSPSALIEYADTQLLPE--ADFLNPAYDYVPPELVDLYITNTGGHQTFYLYRLLGEYYHHDDSSLD 362
[Close]
BLAST of NO11G01510 vs. NCBI_GenBank
Match: OQR89235.1 (translation initiation factor eIF-2B beta subunit [Thraustotheca clavata])

HSP 1 Score: 317.0 bits (811), Expect = 8.400e-83
Identity = 171/354 (48.31%), Postives = 237/354 (66.95%), Query Frame = 0 
Query:   50 LDTWLSTWPNVHGQFRFLVTRLQRRKVVGSLQCAKMTIELLKTVMGTCRWSTAAELMRIVKRVGKALIDAQPLELVIGNIVRRILFLIRDEHAN--KLREDRARHGLATTSLSEDGEAADELNVAVPQLRMAVMEAIGELQLELDNAYGEICELALEHIHANEVILTVGRSRTVEKFLKEAAERRRIFEVIVAESAPTLAGREMAKSLAAGGIETTVISDCAVYAIMARVNQVLLPCRAMIANGGLIAPCGGHMAALAAKELSVPVVCVTGLFKLSPVYRHDQDAFNDLKSPSSLIPYPEAAAMAEGTVDILNPAYDYVPPELVDLYITNTGGHQTSYVYRLLGEYYHHDDSNL 402
            L  WL+ WP +  Q++ LV  L+RR++ GS + ++ T ELL+ V+G  RW+ A +LM  V+ +G+ L+ A P EL IGN++RR+LF+IR+E+ N  K    + +  L   ++   G  AD     + +L+  +ME + EL  E++N +  I + A+E+IHANEVILT G S +VE+FLK AA++R+ F+VIV ES P L G+ MA  LA  GI+TTVI+D AVYA+MARVN+V++P  A++ANGGLIA  G    ALAAK+  VPVV V GLFKL P+Y HD D  N+L SP+ ++ Y E        +D+LNPA DYVPPE V ++ITNTG +Q SY+YRLL EYY   D  L
Sbjct:    7 LQQWLAPWPKIVEQYKQLVVGLKRRQITGSYETSRKTTELLRAVLGAVRWAHARQLMENVRMLGRVLVKAMPQELAIGNVIRRVLFIIREEYLNGMKALSSQPQGQLTLGTILTPGTEAD-FTTPIKELKQTIMEGVSELMDEIENLHISIADQAMEYIHANEVILTFGLSTSVEEFLKAAAKKRQ-FKVIVVESTPLLNGQNMAHRLAESGIDTTVITDSAVYAMMARVNKVVIPAVAVVANGGLIAQSGIQNIALAAKKFCVPVVSVAGLFKLCPLYPHDVDVLNELVSPAHILNYDETLP----NMDVLNPANDYVPPEFVTIFITNTGAYQPSYIYRLLTEYYSPQDYQL 354
[Close]
BLAST of NO11G01510 vs. NCBI_GenBank
Match: XP_008901776.1 (hypothetical protein PPTG_08802 [Phytophthora parasitica INRA-310] >ETI52342.1 hypothetical protein F443_04482 [Phytophthora parasitica P1569] >ETK92232.1 hypothetical protein L915_04354 [Phytophthora parasitica] >ETL45613.1 hypothetical protein L916_04320 [Phytophthora parasitica] >ETL98784.1 hypothetical protein L917_04200 [Phytophthora parasitica] >ETM51949.1 hypothetical protein L914_04302 [Phytophthora parasitica] >ETN12733.1 hypothetical protein PPTG_08802 [Phytophthora parasitica INRA-310] >ETP22163.1 hypothetical protein F441_04454 [Phytophthora parasitica CJ01A1] >ETP50048.1 hypothetical protein F442_04516 [Phytophthora parasitica P10297] >KUF82611.1 Translation initiation factor eIF-2B subunit beta [Phytophthora nicotianae] >KUF85025.1 hypothetical protein AM588_10000807 [Phytophthora nicotianae] >KUF97861.1 Translation initiation factor eIF-2B subunit beta [Phytophthora nicotianae])

HSP 1 Score: 313.9 bits (803), Expect = 7.100e-82
Identity = 177/365 (48.49%), Postives = 240/365 (65.75%), Query Frame = 0 
Query:   46 PKKDLDTWLSTWPNVHGQFRFLVTRLQRRKVVGSLQCAKMTIELLKTVMGTCRWSTAAELMRIVKRVGKALIDAQPLELVIGNIVRRILFLIRDEHANKLREDRA------RHGLATTSLS---EDGEAADELNVAVPQLRMAVMEAIGELQLELDNAYGEICELALEHIHANEVILTVGRSRTVEKFLKEAAERRRIFEVIVAESAPTLAGREMAKSLAAGGIETTVISDCAVYAIMARVNQVLLPCRAMIANGGLIAPCGGHMAALAAKELSVPVVCVTGLFKLSPVYRHDQDAFNDLKSPSSLIPYPEAAAMAEGTVDILNPAYDYVPPELVDLYITNTGGHQTSYVYRLLGEYYHHDDSNL 402
            P K+L  WL  WP V      LV  L+RR++ GS + AKMT  +L  V+ T  WSTA E++  ++++G  L  A   EL IGN+VRR+L++IR+EH+N L+   A      R+   + SL      G   D L++ +  L+++VME I EL  E+D+ +  I + A+E+IH +EVILT G+S +VE FLK AA ++R F+VIV ESAP+L G+ MA +LA  GI  TVI D AV+A+MARVN+V++P  A++ANGGLIA  G    ALAAK+ SVPVVCV GL KLSP+Y HD D  ++L +PSS+  Y +        +++LNPAYDYVPPE V ++ITNTG HQ SY+YRLL EYY   D  L
Sbjct:    4 PTKELKEWLDEWPAVRELVDELVLSLKRRQLRGSYETAKMTTSVLSKVLETVEWSTAGEILEKIRQLGHMLTKAHAHELAIGNVVRRVLYIIREEHSNALKLSSAAAPVSGRNNNLSRSLGTILTPGTDTD-LSIPITDLKLSVMEGIAELVDEIDSLHVNIADQAMEYIHTDEVILTFGQSLSVEAFLKTAA-KKRSFQVIVVESAPSLNGQHMAHALAESGIHVTVIPDSAVFALMARVNKVVVPAAAVVANGGLIAQSGLQNIALAAKKCSVPVVCVAGLIKLSPLYAHDLDVLSELLAPSSIYNYEDTV----DNLEVLNPAYDYVPPECVRIFITNTGAHQPSYIYRLLAEYYSPQDYQL 362
[Close]
BLAST of NO11G01510 vs. NCBI_GenBank
Match: ETO81117.1 (hypothetical protein F444_04510 [Phytophthora parasitica P1976])

HSP 1 Score: 313.9 bits (803), Expect = 7.100e-82
Identity = 177/365 (48.49%), Postives = 240/365 (65.75%), Query Frame = 0 
Query:   46 PKKDLDTWLSTWPNVHGQFRFLVTRLQRRKVVGSLQCAKMTIELLKTVMGTCRWSTAAELMRIVKRVGKALIDAQPLELVIGNIVRRILFLIRDEHANKLREDRA------RHGLATTSLS---EDGEAADELNVAVPQLRMAVMEAIGELQLELDNAYGEICELALEHIHANEVILTVGRSRTVEKFLKEAAERRRIFEVIVAESAPTLAGREMAKSLAAGGIETTVISDCAVYAIMARVNQVLLPCRAMIANGGLIAPCGGHMAALAAKELSVPVVCVTGLFKLSPVYRHDQDAFNDLKSPSSLIPYPEAAAMAEGTVDILNPAYDYVPPELVDLYITNTGGHQTSYVYRLLGEYYHHDDSNL 402
            P K+L  WL  WP V      LV  L+RR++ GS + AKMT  +L  V+ T  WSTA E++  ++++G  L  A   EL IGN+VRR+L++IR+EH+N L+   A      R+   + SL      G   D L++ +  L+++VME I EL  E+D+ +  I + A+E+IH +EVILT G+S +VE FLK AA ++R F+VIV ESAP+L G+ MA +LA  GI  TVI D AV+A+MARVN+V++P  A++ANGGLIA  G    ALAAK+ SVPVVCV GL KLSP+Y HD D  ++L +PSS+  Y +        +++LNPAYDYVPPE V ++ITNTG HQ SY+YRLL EYY   D  L
Sbjct:    4 PTKELKEWLDEWPAVRELVDELVLSLKRRQLRGSYETAKMTTSVLSKVLETVEWSTAGEILEKIRQLGHMLTKAHAHELAIGNVVRRVLYIIREEHSNALKLSSAAAPVSGRNNNLSRSLGTILTPGTDTD-LSIPITDLKLSVMEGIAELVDEIDSLHVNIADQAMEYIHTDEVILTFGQSLSVEAFLKTAA-KKRSFQVIVVESAPSLNGQHMAHALAESGIHVTVIPDSAVFALMARVNKVVVPAAAVVANGGLIAQSGLQNIALAAKKCSVPVVCVAGLIKLSPLYAHDLDVLSELLAPSSIYNYEDTV----DNLEVLNPAYDYVPPECVRIFITNTGAHQPSYIYRLLAEYYSPQDYQL 362
[Close]
BLAST of NO11G01510 vs. NCBI_GenBank
Match: XP_009835206.1 (hypothetical protein H257_10377 [Aphanomyces astaci] >ETV75158.1 hypothetical protein H257_10377 [Aphanomyces astaci])

HSP 1 Score: 312.4 bits (799), Expect = 2.100e-81
Identity = 167/354 (47.18%), Postives = 237/354 (66.95%), Query Frame = 0 
Query:   50 LDTWLSTWPNVHGQFRFLVTRLQRRKVVGSLQCAKMTIELLKTVMGTCRWSTAAELMRIVKRVGKALIDAQPLELVIGNIVRRILFLIRDEHAN--KLREDRARHGLATTSLSEDGEAADELNVAVPQLRMAVMEAIGELQLELDNAYGEICELALEHIHANEVILTVGRSRTVEKFLKEAAERRRIFEVIVAESAPTLAGREMAKSLAAGGIETTVISDCAVYAIMARVNQVLLPCRAMIANGGLIAPCGGHMAALAAKELSVPVVCVTGLFKLSPVYRHDQDAFNDLKSPSSLIPYPEAAAMAEGTVDILNPAYDYVPPELVDLYITNTGGHQTSYVYRLLGEYYHHDDSNL 402
            L  WL+ WP +  Q   L+  L+RR++ GS + ++ T ELL++++GT RW+ A +LM  ++ +G+ L+ A P EL IGN++RR+LF+IR+E+ N  K    + +  L+  ++   G  AD     + +L+ +VME + EL  E++N +  I E A+E+IHANEVILT G S +VE+FLK AA++R+ F+VIV ESAP L G+  A  LA  GI+TT+I D AV+A+MARVN+V++P  A++ANGGLIA  G    ALAAK+  VPVVCV GLFKL P++ HD D  N+L SP+ +  Y +        +D+LNP  DYVPPE V ++ITNTG +Q SY+YRLL EYY   D  L
Sbjct:    6 LKQWLAPWPKISAQLSNLLVGLKRRQITGSYETSRKTTELLRSILGTVRWTHARQLMDNIRLLGRVLVKAIPQELAIGNVIRRVLFIIREEYLNAVKTLSSQTQSQLSLGTILTPGTEAD-YTTPIKELKQSVMEGVSELMDEIENLHVSIAEQAMEYIHANEVILTYGMSTSVEEFLKAAAKKRQ-FKVIVVESAPLLHGQASAHRLAESGIDTTLIPDSAVFALMARVNKVVIPAVAVVANGGLIAESGIQNIALAAKKFCVPVVCVAGLFKLCPLFPHDVDVLNELVSPAHIFNYDDTL----HNIDVLNPVNDYVPPEFVTIFITNTGAYQPSYIYRLLTEYYSPQDYQL 353
[Close]
BLAST of NO11G01510 vs. NCBI_GenBank
Match: GAY04414.1 (Hypothetical protein PINS_012235, partial [Pythium insidiosum])

HSP 1 Score: 312.4 bits (799), Expect = 2.100e-81
Identity = 177/385 (45.97%), Postives = 242/385 (62.86%), Query Frame = 0 
Query:   38 AMDSSVTP-PKKDLDTWLSTWPNVHGQFRFLVTRLQRRKVVGSLQCAKMTIELLKTVMGTCRWSTAAELMRIVKRVGKALIDAQPLELVIGNIVRRILFLIRDEHANKLRE--------------------DRARHGLATTSLSEDGEAADELNVAVPQLRMAVMEAIGELQLELDNAYGEICELALEHIHANEVILTVGRSRTVEKFLKEAAERRRIFEVIVAESAPTLAGREMAKSLAAGGIETTVISDCAVYAIMARVNQVLLPCRAMIANGGLIAPCGGHMAALAAKELSVPVVCVTGLFKLSPVYRHDQDAFNDLKSPSSLIPYPEAAAMAEGTVDILNPAYDYVPPELVDLYITNTGGHQTSYVYRLLGEYYHHDDSNL 402
            A+ + V+P P   LD WL+ WP+V      LV  L+RR++ GS   AK T  LL  ++ +  W TA E+   V+ +G  L  A P EL IGN+VRR+L++IR+EHAN L+                      R+    +  S+   G  AD ++  +  L+ +VMEA+ EL  E+D+ +  I + A+E+IHA+EVILT G S +VE+FLK AA++R  F+VIV ESAP+L G+EMA +LA  G++ TVI D AV+A+M+RVN+V++P  A++ANGGLIA  G    ALAA + SVPVVCV G+ KL P+Y HD D  N+L SPS +  Y +        +++LNPA+DYVPPE V LYITNTG HQ SY+YRLL EYY   D  L
Sbjct:  703 AIMTVVSPAPSTSLDQWLAEWPSVRASVDDLVLSLKRRQLTGSYDTAKRTTMLLSEMLNSVDWKTAGEITEKVRSLGDMLTKAHPQELAIGNVVRRVLYIIREEHANALKSPPPSAKLEARTSSTFSASGASRSYQSRSLGSILTPGTDAD-MSTPIADLKSSVMEALAELIDEIDSLHVNIADQAMEYIHADEVILTYGLSTSVEEFLKNAAKKRE-FKVIVVESAPSLNGQEMAHALAQSGMDVTVIPDSAVFAMMSRVNKVVIPAAAVVANGGLIAQSGLQNIALAAMKCSVPVVCVAGIIKLCPLYAHDLDVLNELVSPSQIYNYEDTV----DNLEVLNPAFDYVPPEFVSLYITNTGAHQPSYIYRLLAEYYSPQDYQL 1081
[Close]
BLAST of NO11G01510 vs. NCBI_GenBank
Match: XP_009522595.1 (hypothetical protein PHYSODRAFT_312818 [Phytophthora sojae] >EGZ19878.1 hypothetical protein PHYSODRAFT_312818 [Phytophthora sojae])

HSP 1 Score: 310.1 bits (793), Expect = 1.000e-80
Identity = 174/373 (46.65%), Postives = 239/373 (64.08%), Query Frame = 0 
Query:   46 PKKDLDTWLSTWPNVHGQFRFLVTRLQRRKVVGSLQCAKMTIELLKTVMGTCRWSTAAELMRIVKRVGKALIDAQPLELVIGNIVRRILFLIRDEHANKLREDRARHGLATT-----------------SLSEDGEAADELNVAVPQLRMAVMEAIGELQLELDNAYGEICELALEHIHANEVILTVGRSRTVEKFLKEAAERRRIFEVIVAESAPTLAGREMAKSLAAGGIETTVISDCAVYAIMARVNQVLLPCRAMIANGGLIAPCGGHMAALAAKELSVPVVCVTGLFKLSPVYRHDQDAFNDLKSPSSLIPYPEAAAMAEGTVDILNPAYDYVPPELVDLYITNTGGHQTSYVYRLLGEYYHHDDSNL 402
            P K+L  WL  WP V      L+  L+RR++ GS + AKMT  +L  V+ T  WSTA E++  ++++G  L  A   EL IGN+VRR+L++IR+EH+N L+   A  G A                   ++   G   D L++ +  L+++VME I EL  E+D+ +  I + A+E+IH++EVILT G S +VE FLK AA++R+ F+VIV ESAP+L G+  A +LA  GI  TVI D AV+A+MARVN+V++P  A++ANGGLIA  G    ALAAK+ SVPVVCV GL KLSP+Y HD D  ++L +PSS+  Y +        +++LNPAYDYVPPE V ++ITNTG HQ SY+YRLL EYY   D  L
Sbjct:    4 PTKELKEWLDEWPVVRDLVDELLLSLKRRQLRGSYETAKMTTSVLSKVLETVEWSTAGEILEKIRQLGHMLTKAHAHELAIGNVVRRVLYIIREEHSNALKLSSADGGAAAQVPAPPSSRNNNLSRSLGTILTPGTDTD-LSIPIADLKLSVMEGIAELVDEIDSLHVNIADQAMEYIHSDEVILTFGMSLSVEAFLKTAAKKRQ-FKVIVVESAPSLNGQRTAHALAESGIHVTVIPDSAVFALMARVNKVVVPAAAVVANGGLIAQSGLQNIALAAKKCSVPVVCVAGLIKLSPLYAHDLDVLSELMAPSSIYNYEDTV----DNLEVLNPAYDYVPPECVRIFITNTGAHQPSYIYRLLAEYYSPQDYQL 370
[Close]
BLAST of NO11G01510 vs. NCBI_GenBank
Match: XP_008606916.1 (hypothetical protein SDRG_03075 [Saprolegnia diclina VS20] >EQC39644.1 hypothetical protein SDRG_03075 [Saprolegnia diclina VS20])

HSP 1 Score: 308.1 bits (788), Expect = 3.900e-80
Identity = 166/354 (46.89%), Postives = 236/354 (66.67%), Query Frame = 0 
Query:   50 LDTWLSTWPNVHGQFRFLVTRLQRRKVVGSLQCAKMTIELLKTVMGTCRWSTAAELMRIVKRVGKALIDAQPLELVIGNIVRRILFLIRDEHAN--KLREDRARHGLATTSLSEDGEAADELNVAVPQLRMAVMEAIGELQLELDNAYGEICELALEHIHANEVILTVGRSRTVEKFLKEAAERRRIFEVIVAESAPTLAGREMAKSLAAGGIETTVISDCAVYAIMARVNQVLLPCRAMIANGGLIAPCGGHMAALAAKELSVPVVCVTGLFKLSPVYRHDQDAFNDLKSPSSLIPYPEAAAMAEGTVDILNPAYDYVPPELVDLYITNTGGHQTSYVYRLLGEYYHHDDSNL 402
            L  WL+ WP +  Q   L+  L+RR++ GS + ++ T ELL+ V+G  R++ A +LM  ++ +G+ LI A P EL IGN++RR+LF++R+E+ N  K    + +  L+  ++   G   D+    + +L+ A+ME + EL  E++N +  I + A+E+IHANEVILT G S +VE+FLK AA++R+ F+VIV ES P L G+ MA  LA  GI+TTVI+D AV+A+MARVN+V++P  A++ANGGLIA  G    ALAAK+  VPVV V GLFKL P+Y HD D  N+L SP+ ++ Y E        +D+LNP  DYVPPE V ++ITNTG +Q SY+YRLL EYY   D  L
Sbjct:   28 LQQWLAPWPKIQDQLNLLLVGLKRRQITGSYETSRKTTELLRAVLGAVRFTHARQLMEHIRILGRVLIKAIPQELAIGNVIRRVLFIVREEYLNGMKTLSSQTQAQLSLGTILTPG-MEDDFTTPIKELKQAIMEGVSELMDEIENLHISIADQAMEYIHANEVILTYGLSTSVEEFLKAAAKKRQ-FKVIVVESTPVLNGQNMAHRLAESGIDTTVITDSAVFAMMARVNKVVIPAIAVVANGGLIAQSGIQNIALAAKKFCVPVVSVAGLFKLCPLYPHDLDVLNELVSPAHILNYDETLP----NMDVLNPVNDYVPPEHVTIFITNTGAYQPSYIYRLLTEYYSPQDYQL 375
[Close]
BLAST of NO11G01510 vs. NCBI_GenBank
Match: XP_012195539.1 (hypothetical protein SPRG_01783 [Saprolegnia parasitica CBS 223.65] >KDO33903.1 hypothetical protein SPRG_01783 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 308.1 bits (788), Expect = 3.900e-80
Identity = 166/354 (46.89%), Postives = 236/354 (66.67%), Query Frame = 0 
Query:   50 LDTWLSTWPNVHGQFRFLVTRLQRRKVVGSLQCAKMTIELLKTVMGTCRWSTAAELMRIVKRVGKALIDAQPLELVIGNIVRRILFLIRDEHAN--KLREDRARHGLATTSLSEDGEAADELNVAVPQLRMAVMEAIGELQLELDNAYGEICELALEHIHANEVILTVGRSRTVEKFLKEAAERRRIFEVIVAESAPTLAGREMAKSLAAGGIETTVISDCAVYAIMARVNQVLLPCRAMIANGGLIAPCGGHMAALAAKELSVPVVCVTGLFKLSPVYRHDQDAFNDLKSPSSLIPYPEAAAMAEGTVDILNPAYDYVPPELVDLYITNTGGHQTSYVYRLLGEYYHHDDSNL 402
            L  WL+ WP +  Q   L+  L+RR++ GS + ++ T ELL+ V+G  R++ A +LM  ++ +G+ LI A P EL IGN++RR+LF++R+E+ N  K    + +  L+  ++   G   D+    + +L+ A+ME + EL  E++N +  I + A+E+IHANEVILT G S +VE+FLK AA++R+ F+VIV ES P L G+ MA  LA  GI+TTVI+D AV+A+MARVN+V++P  A++ANGGLIA  G    ALAAK+  VPVV V GLFKL P+Y HD D  N+L SP+ ++ Y E        +D+LNP  DYVPPE V ++ITNTG +Q SY+YRLL EYY   D  L
Sbjct:    7 LQQWLAPWPKIQDQLNLLLVGLKRRQITGSYETSRKTTELLRAVLGAVRFTHARQLMEHIRILGRVLIKAIPQELAIGNVIRRVLFIVREEYLNGMKALSSQTQAQLSLGTILTPG-MEDDFTTPIKELKQAIMEGVSELMDEIENLHISIADQAMEYIHANEVILTYGLSTSVEEFLKAAAKKRQ-FKVIVVESTPVLNGQNMAHRLAESGIDTTVITDSAVFAMMARVNKVVIPAIAVVANGGLIAQSGIQNIALAAKKFCVPVVSVAGLFKLCPLYPHDLDVLNELVSPAHILNYDETLP----NMDVLNPVNDYVPPEHVTIFITNTGAYQPSYIYRLLTEYYSPQDYQL 354
[Close]
BLAST of NO11G01510 vs. NCBI_GenBank
Match: OQR95120.1 (translation initiation factor eIF-2B beta subunit [Achlya hypogyna])

HSP 1 Score: 308.1 bits (788), Expect = 3.900e-80
Identity = 166/356 (46.63%), Postives = 237/356 (66.57%), Query Frame = 0 
Query:   48 KDLDTWLSTWPNVHGQFRFLVTRLQRRKVVGSLQCAKMTIELLKTVMGTCRWSTAAELMRIVKRVGKALIDAQPLELVIGNIVRRILFLIRDEHAN--KLREDRARHGLATTSLSEDGEAADELNVAVPQLRMAVMEAIGELQLELDNAYGEICELALEHIHANEVILTVGRSRTVEKFLKEAAERRRIFEVIVAESAPTLAGREMAKSLAAGGIETTVISDCAVYAIMARVNQVLLPCRAMIANGGLIAPCGGHMAALAAKELSVPVVCVTGLFKLSPVYRHDQDAFNDLKSPSSLIPYPEAAAMAEGTVDILNPAYDYVPPELVDLYITNTGGHQTSYVYRLLGEYYHHDDSNL 402
            +++  WL  WP +  QF  LV  L+RR++ GS + ++ T ELL+ V+G  R++ A +LM  ++ +G+ LI A P EL IGN++RR+LF++R+E+ N  K    + +  L+  ++   G   D+    + +L+ A+ME + EL  E++N +  I + A+E+IHANEVILT G S +VE+FLK AA++R+ F+VIV ES P L G+ MA  L   GI+TTVI+D AV+A+MARVN+V++P  A++ANGGLIA  G    ALAAK+  VPVV V GLFKL P+Y HD D  N+L SP+ ++ Y E        +D+LNP  DYVPPE V ++ITNTG +Q SY+YRLL EYY   D  L
Sbjct:    2 EEVQEWLKPWPKILDQFNQLVVGLKRRQITGSYETSRKTTELLRAVLGAVRFTHARQLMEHIRLLGRVLIKAIPQELAIGNVIRRVLFIVREEYLNGMKALSSQTQAQLSLGTILTPG-MEDDFTTPIKELKQAIMEGVSELMDEIENLHISIADQAMEYIHANEVILTYGLSTSVEEFLKAAAKKRQ-FKVIVVESTPLLNGQTMAHRLVESGIDTTVITDSAVFAMMARVNKVVIPAVAVVANGGLIAQSGIQNIALAAKKFCVPVVSVAGLFKLCPLYPHDLDVLNELVSPAHILNYDETLP----NMDVLNPVNDYVPPEFVTIFITNTGAYQPSYIYRLLTEYYSPQDYQL 351
The following BLAST results are available for this feature:
BLAST of NO11G01510 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM25071.15.100e-16582.42translation initiation factor eif-2b subunit beta ... [more]
OQR89235.18.400e-8348.31translation initiation factor eIF-2B beta subunit ... [more]
XP_008901776.17.100e-8248.49hypothetical protein PPTG_08802 [Phytophthora para... [more]
ETO81117.17.100e-8248.49hypothetical protein F444_04510 [Phytophthora para... [more]
XP_009835206.12.100e-8147.18hypothetical protein H257_10377 [Aphanomyces astac... [more]
GAY04414.12.100e-8145.97Hypothetical protein PINS_012235, partial [Pythium... [more]
XP_009522595.11.000e-8046.65hypothetical protein PHYSODRAFT_312818 [Phytophtho... [more]
XP_008606916.13.900e-8046.89hypothetical protein SDRG_03075 [Saprolegnia dicli... [more]
XP_012195539.13.900e-8046.89hypothetical protein SPRG_01783 [Saprolegnia paras... [more]
OQR95120.13.900e-8046.63translation initiation factor eIF-2B beta subunit ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL116nonsL116Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL115nonsL115Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR010ncniR010Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR019ngnoR019Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR018ngnoR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002114NSK002114Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO11G01510.2NO11G01510.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO11G01510.1NO11G01510.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|591189gene_5034Nannochloropsis oceanica (N. oceanica CCMP1779)gene
EIF2Bbetagene5434Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO11G01510.2NO11G01510.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO11G01510.1NO11G01510.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO11G01510 ID=NO11G01510|Name=NO11G01510|organism=Nannochloropsis oceanica|type=gene|length=2476bp
TGCACAGGTTGTTTGTATCCTGATCGCTCATTCGTCATGATATTAATTGC
TAACTCACATATGCACATTCTTAGCGGAACGAAGCTACGAATCATCATCC
AGTCGAGCATACGCTTGACTCTCCGCCTCTGACGGCGACTACTTCTCCCC
CGCCAATATCGCTGATGACGATAGTAGCACGAGGTCCGCCGGCTTGAACA
GCCGCCGGACCCACCAGGAGTTCGGGCACCATGCCCCACGTAGACGGCCC
GTTCGTAGGTCAAAACGAGTACCGAAGACAGGGTCCTGCACTGACAAAAT
TGCCGGATCCACTTCCGCGTGTAACAAGGAGTGGTTAGTGGGTGGGCAGG
TATCTTGTAGCACGAAGGTGCGACCATCTGCGATGCTGATGGTGATTGTG
GCCCGATCGCTTTGAGTGAGAGCGTGCCTCGTCAAACGGTAGAAGGGAGT
GGCCTGGAGAGCCATGCAGGCAGAGGCGTGGGGAACATTTGCAAGCAGGA
TAGGACATGGCATAAATGCCCTTGCAATAACCACCAGCTCGAGGAGTAGG
AGCAGGAGCAGCTTTGGGATGCAGCGCTGAAGTCTAGCTGCTGCCATTAG
AGGTCCAACATTTGGCAGCGCAGCGTCAGACATGGGTTGACGACGGGTCT
GTCAGTGCTTCTGATCAGGAGTGTTGTCGGAATTGTTGTTGTTAATTTTG
TTAAGGTCATTGTTGTAAGCACGCGAGGTACCTAGAGTACAAGTGATGCC
TCGCCTTCGGCCTCTCCTTCAGGCGGCGATTCTCAGACCTCTCCTCCTCC
CACCAGTACCAATCACCCACCCATCCCGTCCCACACCCCACCATAGACTG
GCAGGAGCGATGGACTCATCAGTCACGCCCCCTAAAAAAGATCTCGACAC
TTGGTTGTCCACGTGGCCGAACGTGCATGGCCAATTTCGCTTTCTCGTCA
CGAGgtgagaagaggtttgcaatgaaggaggggaggcgggatagacttgc
cttaccagcatatactcatgcccccgcccccgtacacatgcaccccatac
cggtggcgatgatagATTGCAGCGGCGCAAGGTGGTAGGCTCCCTACAAT
GCGCCAAGATGACGATCGAATTGCTCAAgtaagtggtgcaaggggtggga
agggaagaagctggcgtagtaaatgaggccggcagccgaagtcttgccgc
caagtgctccgcttcgaactcctcatcctcaccatgaacaaggctggtta
tgagcaagtgcacgccctgtcacccaccaccgcttgcaatgcctgcttga
cacatgggctcgcattacttccctccttacccccccgtctcattatccgc
cccgcccctgagacaagaaacgatgcctggcactcctccgcacggaatat
cctcaaaacctaacttaataccccttcatgtttttttgctaactaacatt
cgccatctcgaacaccgaactctaaataatacacatagGACCGTGATGGG
CACCTGCCGATGGTCAACCGCCGCGGAGCTCATGCGCATCGTCAAACGTG
TGGGTAAAGCCCTCATCGACGCCCAGCCTCTTGAACTTGTTATTGGAAAC
ATTGTCCGTCGTATCCTTTTTCTCATCCGAGACGAGCATGCCAACAAATT
ACGGGAGGATCGGGCGCGACATGGTTTAGCGACCACCTCTCTCTCTGAGG
ATGGGGAGGCGGCGGACGAGCTGAATGTGGCTGTGCCTCAGCTACGGATG
GCGGTGATGGAAGCCATCGGGGAATTGCAATTGGAATTAGATAATGCCTA
TGGGGAGATATGCGAGCTGGCACTGGAACATATTCATGCGAACGAGGTGA
TCTTGACGGTTGGGAGGTCGAGGACGGTGGAGAAATTTTTGAAAGAAGCG
GCGGAGAGACGGAGGATATTCGAGGTGATTGTTGCCGAGTCCGCCCCAAC
GCTCGCGGGCAGGGAGATGGCCAAGAGCTTGGCGGCGGGCGGGATTGAAA
CGACGGTGATAAGCGACTGTGCAGTTTATGCGATCATGGCCCGAGTGAAT
CAGGTGTTGTTGCCTTGTCGAGCGATGATAGCGAATGGAGGGTTAATTGC
TCCGTGTGGGGGGCATATGGCGGCGTTGGCAGCCAAGGAGCTGTCGGTCC
CGGTGGTGTGTGTGACGGGCTTGTTCAAGCTGAGTCCGGTTTACCGACAT
GACCAGGATGCGTTCAATGATTTGAAGTCGCCCAGTTCCTTGATACCATA
CCCAGAGGCTGCAGCAATGGCGGAGGGAACGGTGGACATTCTGAACCCGG
CCTATGATTATGTGCCACCGGAGTTGGTCGATTTGTACATTACCAATACG
GGGGGACATCAAACGAGCTATGTCTATCGGTTGTTGGGGGAGTATTATCA
CCATGATGACTCGAATTTGGATTAGATTAGATTGGAGAGCACGTAAACCA
CTTGTTCACAAAGAAGCAACGCGAGA
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protein sequence of NO11G01510.2

>NO11G01510.2-protein ID=NO11G01510.2-protein|Name=NO11G01510.2|organism=Nannochloropsis oceanica|type=polypeptide|length=374bp
MGSHYFPPYPPVSLSAPPLRQETMPGTPPHGISSKPNLIPLHVFLLTNIR
HLEHRTLNNTHRTVMGTCRWSTAAELMRIVKRVGKALIDAQPLELVIGNI
VRRILFLIRDEHANKLREDRARHGLATTSLSEDGEAADELNVAVPQLRMA
VMEAIGELQLELDNAYGEICELALEHIHANEVILTVGRSRTVEKFLKEAA
ERRRIFEVIVAESAPTLAGREMAKSLAAGGIETTVISDCAVYAIMARVNQ
VLLPCRAMIANGGLIAPCGGHMAALAAKELSVPVVCVTGLFKLSPVYRHD
QDAFNDLKSPSSLIPYPEAAAMAEGTVDILNPAYDYVPPELVDLYITNTG
GHQTSYVYRLLGEYYHHDDSNLD*
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protein sequence of NO11G01510.1

>NO11G01510.1-protein ID=NO11G01510.1-protein|Name=NO11G01510.1|organism=Nannochloropsis oceanica|type=polypeptide|length=403bp
MPRLRPLLQAAILRPLLLPPVPITHPSRPTPHHRLAGAMDSSVTPPKKDL
DTWLSTWPNVHGQFRFLVTRLQRRKVVGSLQCAKMTIELLKTVMGTCRWS
TAAELMRIVKRVGKALIDAQPLELVIGNIVRRILFLIRDEHANKLREDRA
RHGLATTSLSEDGEAADELNVAVPQLRMAVMEAIGELQLELDNAYGEICE
LALEHIHANEVILTVGRSRTVEKFLKEAAERRRIFEVIVAESAPTLAGRE
MAKSLAAGGIETTVISDCAVYAIMARVNQVLLPCRAMIANGGLIAPCGGH
MAALAAKELSVPVVCVTGLFKLSPVYRHDQDAFNDLKSPSSLIPYPEAAA
MAEGTVDILNPAYDYVPPELVDLYITNTGGHQTSYVYRLLGEYYHHDDSN
LD*
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Synonyms
Publications