NO11G01430, NO11G01430 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO11G01430 vs. NCBI_GenBank
Match: XP_008879360.1 (hypothetical protein H310_13585 [Aphanomyces invadans] >ETV92063.1 hypothetical protein H310_13585 [Aphanomyces invadans]) HSP 1 Score: 123.6 bits (309), Expect = 8.100e-25 Identity = 78/218 (35.78%), Postives = 117/218 (53.67%), Query Frame = 0 Query: 6 LKWGAGLIAFSPISSLFLLVVTKRPELVIISIIGAFAYLVALLLSSALWAVLGPGKQFAALTVVMGVICQALMRACLYKLYHKTEILIKSANHPFLHMPLNDVTSSLSAGTGYAVMHCVMLFGSVLASGSSDPGVLYAPSCRGSPLVLVLAFLALXXXXXXXXXXXXXXXXMRRRMIRRMVVMLGLHLVASGVTISNKMDNGCTVSLPLVYGVVAAAL 224 L WG L F+P+S LFL VV +R +LVI+SI AF YL+ LL+++ LW+V+ P T+ + ++ Q L R + +Y + E +K +PLND+TSS ++G G+A+M +ML+G+VLAS + G + +C PLV A L R+R +V ++ LHL + + N + GCT S+PL Y VAA L Sbjct: 6 LFWGCMLTGFAPVSFLFLTVVAQRAQLVILSITAAFFYLLGLLVAATLWSVIPPLHDSIHATIPVAILVQELFRYAFFVVYIRCEQAVKRVTTKQNQLPLNDLTSSFASGVGFALMRALMLYGTVLASSMAGEGAAFTATCPQIPLVFASALSTLALTLMDIALMILAFEGYRKRSATHIVAVVLLHLGSGLSNMLNLNEVGCTASIPLTY--VAALL 221
BLAST of NO11G01430 vs. NCBI_GenBank
Match: OQS02105.1 (hypothetical protein THRCLA_05500 [Thraustotheca clavata]) HSP 1 Score: 121.7 bits (304), Expect = 3.100e-24 Identity = 70/224 (31.25%), Postives = 122/224 (54.46%), Query Frame = 0 Query: 1 MPAAELKWGAGLIAFSPISSLFLLVVTKRPELVIISIIGAFAYLVALLLSSALWAVLGPGKQFAALTVVMGVICQALMRACLYKLYHKTEILIKSANHPFLHMPLNDVTSSLSAGTGYAVMHCVMLFGSVLASGSSDPGVLYAPSCRGSPLVLVLAFLALXXXXXXXXXXXXXXXXMRRRMIRRMVVMLGLHLVASGVTISNKMDNGCTVSLPLVYGVVAAALL 225 M A L +G+ + AF PI+SLFLLVV +R +LVI+SI AF YL+ LL+++ +W+++ P + T+ + ++ Q + R + +Y + E+ +K +PLND+T+S ++G G+A+M +ML+G+VLA+ G + +C PLV A L R++ I + ++ +HL + + N + GC S+PL + A A++ Sbjct: 1 MAAWALFFGSLMTAFGPIASLFLLVVAQRAQLVIVSITSAFFYLLGLLVAATIWSIIPPLQTSIQATIPIAIVLQEIFRYVFFVVYVRCELAVKKVTTKQNQLPLNDLTTSFASGVGFALMRALMLYGTVLAASVQGEGAAFTETCPSIPLVFSSALSTLALTLMDVALMVVAFEGFRKKSIAHIAAVVLIHLGSGLSNLLNLNEVGCKASIPLTFVAAALAII 224
BLAST of NO11G01430 vs. NCBI_GenBank
Match: OQR97789.1 (hypothetical protein ACHHYP_10010 [Achlya hypogyna]) HSP 1 Score: 120.6 bits (301), Expect = 6.800e-24 Identity = 69/219 (31.51%), Postives = 117/219 (53.42%), Query Frame = 0 Query: 6 LKWGAGLIAFSPISSLFLLVVTKRPELVIISIIGAFAYLVALLLSSALWAVLGPGKQFAALTVVMGVICQALMRACLYKLYHKTEILIKSANHPFLHMPLNDVTSSLSAGTGYAVMHCVMLFGSVLASGSSDPGVLYAPSCRGSPLVLVLAFLALXXXXXXXXXXXXXXXXMRRRMIRRMVVMLGLHLVASGVTISNKMDNGCTVSLPLVYGVVAAALL 225 L WG+ L AF+PI++LFL+VV +R +LVI+ I AF YL+ LL+++ +W V+ P + T+ + ++ Q + R + +Y + E+ +K +PLND+T+S ++G G+A+M +ML+G+VLAS G + +C PLV A L R++ + ++ +HL + + N + GC S+PL Y A+L Sbjct: 6 LFWGSLLTAFAPIAALFLMVVAQRAQLVILCITAAFFYLLGLLVAATVWTVITPLQSSVQATIPIAILLQEVFRYIFFNVYVRCELAVKKVTTKQNQLPLNDLTTSFASGVGFALMRALMLYGTVLASSVQGEGAAFTDTCASVPLVFASALSTLALTIMDVALMIVAFEGFRKKSAPHIAAVVLIHLGSGLSNMLNLNEVGCKASIPLTYVAAVFAVL 224
BLAST of NO11G01430 vs. NCBI_GenBank
Match: XP_009843694.1 (hypothetical protein H257_16820 [Aphanomyces astaci] >XP_009843695.1 hypothetical protein, variant [Aphanomyces astaci] >ETV66891.1 hypothetical protein H257_16820 [Aphanomyces astaci] >ETV66892.1 hypothetical protein, variant [Aphanomyces astaci]) HSP 1 Score: 119.8 bits (299), Expect = 1.200e-23 Identity = 76/218 (34.86%), Postives = 117/218 (53.67%), Query Frame = 0 Query: 6 LKWGAGLIAFSPISSLFLLVVTKRPELVIISIIGAFAYLVALLLSSALWAVLGPGKQFAALTVVMGVICQALMRACLYKLYHKTEILIKSANHPFLHMPLNDVTSSLSAGTGYAVMHCVMLFGSVLASGSSDPGVLYAPSCRGSPLVLVLAFLALXXXXXXXXXXXXXXXXMRRRMIRRMVVMLGLHLVASGVTISNKMDNGCTVSLPLVYGVVAAAL 224 L WG L AF+PIS LF VV +R +LVI+SI AF YL+ LL+++ LW V+ P T+ + ++ Q L R + +Y + E +K +PLND+TSS ++G G+A+M +M++G+VLAS + G + +C PLV A L R+R +V ++ LH+ + + N + GC+ S+PL Y VAA+L Sbjct: 6 LFWGCMLTAFAPISFLFFTVVAQRAQLVILSITAAFFYLLGLLVAATLWTVIPPLHDSIHATIPVAILVQELFRYAFFIVYIRCEQAVKRVTTKQNQLPLNDLTSSFASGVGFALMRALMMYGTVLASSLAGEGASFTATCPQIPLVFASALSTLALTLLDVALMVLAFEGYRKRSAAHIVAVVLLHVGSGLSNMLNLNEVGCSASIPLTY--VAASL 221
BLAST of NO11G01430 vs. NCBI_GenBank
Match: CCI46054.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 112.5 bits (280), Expect = 1.900e-21 Identity = 70/228 (30.70%), Postives = 116/228 (50.88%), Query Frame = 0 Query: 1 MPAAELKW----GAGLIAFSPISSLFLLVVTKRPELVIISIIGAFAYLVALLLSSALWAVLGPGKQFAALTVVMGVICQALMRACLYKLYHKTEILIKSANHPFLHMPLNDVTSSLSAGTGYAVMHCVMLFGSVLASGSSDPGVLYAPSCRGSPLVLVLAFLALXXXXXXXXXXXXXXXXMRRRMIRRMVVMLGLHLVASGVTISNKMDNGCTVSLPLVYGVVAAALL 225 +P + W G AF PI++ F +++ KR +L+II++ AF +L++ L+S+ +W ++ K T+ + V+ Q + R Y+LY + I+ +PLND TSSL++G GY++MH +M++GSVL S + G Y C P+V A AL R R + +++ LHL ++N+ NGC +S+P+ YG A L Sbjct: 3 LPGGTVNWPLLFGCIFTAFGPITTFFFILIGKRAQLIIIALTAAFIWLISTLISATIWQIIPALKSSIEATICITVVIQEIGRYTFYQLYSHGVVAIQKVTTTKHQLPLNDFTSSLASGVGYSLMHSLMVYGSVLGSSTGFRGAAYRDYCE-LPVVFTGAITALALSISDVALMVMAFVGYRSRNWSVICMVVILHLGIGLSALANQKSNGCVISIPIHYGGAVVACL 229
BLAST of NO11G01430 vs. NCBI_GenBank
Match: CBN76993.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 101.3 bits (251), Expect = 4.300e-18 Identity = 80/265 (30.19%), Postives = 116/265 (43.77%), Query Frame = 0 Query: 9 GAGLIAFSPISSLFLLVVTKRPELVIISIIGAFAYLVALLLSSALWAVLGPGKQFAALTVVMGVICQALMRACLYKLYHKTEILIKSA---------------------------------------------NHPFLHMPLNDVTSSLSAGTGYAVMHCVMLFGSVLASGSSDPGVLYAPSCRGSPLVLVLAFLALXXXXXXXXXXXXXXXXMRRRMIRRMVVMLGLHLVASGVTISNKMDNGCTVSLPLVYGVVAAALLTTVR 229 G LIAF P L+++VV KRP LVII ++GAF +L ++ +S LW ++ + L+++ GV+ R L K+Y KTE +I A + LN V+SS++AG G+ ++H V++ G+ L S PG ++PSC P V+V A A R M GLH A+ T N ++ GCT SLPL+YGVVA A + R Sbjct: 8 GCSLIAFGPSIMLWVVVVGKRPALVIIGLVGAFFWLASMAAASVLWTIVPAAQDAWLLSMITGVVLHGFGRLALAKVYVKTEAVINEAAAHAAPXXXXXXXXXXXXXXXXXXXXXXXXEGRGERKTGDVPDQPEESSGLLRLNGVSSSIAAGVGWGLIHAVIMVGTAL-SKHMGPGAAFSPSCPHVPSVIVSALSAQAFVVLDLLLMAAAFAAARSGDAGLMSFSFGLHFAAALTTGFNFIEGGCTASLPLLYGVVALAAIALTR 271
BLAST of NO11G01430 vs. NCBI_GenBank
Match: XP_004336896.1 (Gammasecretase subunit APH-1B, putative [Acanthamoeba castellanii str. Neff] >ELR14883.1 Gammasecretase subunit APH-1B, putative [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 99.0 bits (245), Expect = 2.100e-17 Identity = 75/226 (33.19%), Postives = 113/226 (50.00%), Query Frame = 0 Query: 9 GAGLIAFSPISSLFLLVVTKRPELVIISIIGAFAYLVALLLSSALWAVLGPGKQFAALTVVMGVICQALMRACLYKLYHKTEILIKSANHPFLHMP--LNDVTSSLSAGTGYAVMHCVMLFGSVLASGSSDPGVLYAPSCRGSPLVLVLAFLALXXXXXXXXXXXXXXXXMR----RRMIRRMVVMLGLHLVASGVTISNKMDNGCTVSLPLVYGVVAAALLTTVR 229 G LIAF P +LF + + +LV++ + +F +L+++LL+S LW VL P + V V+ Q MR YKLY K + + P + +P L+ ++SL+ G G+ H V+++GSVLAS ++ PG LYAP+C L L+ A AL + R + + VM G H V S +T+ N+ C S LVY +A L T R Sbjct: 8 GCALIAFGPALALFWMFIAPSAQLVVLMVGSSFFWLLSILLTSILWYVLVPLRTHYWFIVPFAVLLQEAMRWAFYKLYAKAQKAFTGGSSPNVAVPHALDYFSASLAIGLGFGFTHGVVMYGSVLAS-ANGPGSLYAPACPSVSLFLLSAVFALAFITMHVLLSVLSFDAYKVTEWRPFLIKTGVMAGGHFVISLLTLLNQEGGSCVASAVLVYLALAVLALFTAR 232
BLAST of NO11G01430 vs. NCBI_GenBank
Match: EJK53088.1 (hypothetical protein THAOC_27540 [Thalassiosira oceanica]) HSP 1 Score: 94.4 bits (233), Expect = 5.200e-16 Identity = 92/326 (28.22%), Postives = 132/326 (40.49%), Query Frame = 0 Query: 1 MPAAELKWGAGLIAFSPISSLFLLVVTKRPELVIISIIGAFAYLVALLLSSALWAVLG-----------PGKQFAALTVVMGVICQALMRACLYKLYHKTEILIKS-----------------------------ANHPFLHMPLNDVTSSLSAGTGYAVMHCVMLFGSVLASGSSDP----------------GVLYAPSCRGSPLVLVLAFLALXXXXXXXXXXXXXXXXMRRR--MIRR------------------------------MVVMLGLHLVASGVTISNKMDNGCTVSLPLVYGVV--AAALLTTVREWRELRED 237 M A L G L+ FSP +SL +VV ++P+LVI+++ AFAYL++ LLSS +W V G A V GV CQ L+R + Y + E +I+ A L + LND + L++G GYA++H ++L+G++LAS S + G LY SC G P V+ A + +RRR M+ R +VV HL AS + N ++GC +SLPL+ VV AA LL + L ED Sbjct: 445 MTAPSLTLGCILLGFSPTASLLFMVVLRKPQLVILAVCSAFAYLLSALLSSTIWLVTSSIAGAVGGGSTSGIGTAISIAVPGVACQMLLRCLFVRTYFRVETVIRGSVEKHERETRXXXXXXXXXXXXXXXXXEHAETDALQLQLNDTSCGLASGCGYALLHSLLLYGTLLASESGESNSDGAYXXXXXXXXHGGTLYQASCGGVPSVVNGALICCMFGILDVIWMMMCFWGVRRRLTMVARRGSGGGTAAQVWTALALGRVDDGPAGGNAALVVAAATHLAASFALVPNGAEDGCRISLPLLGLVVVWAAVLLQRMTAGGFLPED 770
BLAST of NO11G01430 vs. NCBI_GenBank
Match: CCA22534.1 (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 89.0 bits (219), Expect = 2.200e-14 Identity = 61/212 (28.77%), Postives = 104/212 (49.06%), Query Frame = 0 Query: 6 LKWGAGLIAFSPISSLFLLVVTKRPELVIISIIGAFAYLVALLLSSALWAVLGPGKQFAALTVVMGVICQALMRACLYKLYHKTEILIKSANHPFLHMPLNDVTSSLSAGTGYAVMHCVMLFGSVLASGSSDPGVLYAPSCRGSPLVLVLAFLALXXXXXXXXXXXXXXXXMRRRMIRRMVVMLGLHLVASGVTISNKMDNGCTVSLPLVYG 218 L +G L A+ PI++LF +++ KR +L+II++ AF + K A T+ + ++ Q + R ++LY + + I+ +PLND TSSL++G GY++MH +M++G+VL S + G + C P+V A +L R R + ++L LHL ++N NGC +S+P+ YG Sbjct: 12 LLFGCILTAYGPIATLFFILIGKRAQLIIIALTSAFIWXXXXXXXXXXXXXXPVLKSSAEATICVTILIQEIGRYTYFQLYSRGVVAIQKVTTTKHQLPLNDFTSSLASGVGYSLMHSLMVYGTVLGSSTGFRGAAFRDYCT-LPVVFTGAITSLALSISDVALMVMAFAGYRSRNWSIICMVLVLHLGIGLSALANFKSNGCVISIPIHYG 222
BLAST of NO11G01430 vs. NCBI_GenBank
Match: GBG30301.1 (Gamma-secretase subunit APH-1B [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 79.3 bits (194), Expect = 1.700e-11 Identity = 65/222 (29.28%), Postives = 113/222 (50.90%), Query Frame = 0 Query: 9 GAGLIAFSPISSLFLLVVTKRPELVIISIIGAFAYLVALLLSSALWAVLGPGKQFAALTVVMGVICQALMRACLYKLY-----HKTEILIKSANHPFLHMPLNDVTSSLSAGTGYAVMHCVMLFGSVLASGSSDPGVLYAPSCRGSPLVLVLAFLALXXXXXXXXXXXXXXXXMRRR----------MIRRMVVMLGLHLVASGVTISN-KMDNGCTVSLPL 215 G + +F P ++LF V+ +R +LV++++ AF +++++ S LW V+ P ++ A+ +V+GVI Q L R L LY H E++ +H L LND +SS++ G+G+ +M V+L+G VL + D G + +C +V + L L +RR + RM+++L LHL+ S +++ N MD GC + L Sbjct: 8 GVVIFSFGPAAALFFGVLARRAQLVLLAVSAAFMCVMSMVASGVLWYVIKPLQEEASGIIVIGVIFQELFRWALLALYLRADKHIFELIEHKKDHKKL---LNDFSSSVAMGSGFGIMSTVLLYGGVLEASLVD-GDYFTAACPNISGFVVSSLLCLLYQVMHIALTIVTLDALRRSQRETSHPTAILTVRMLLVLVLHLLVSLLSVMNGDMDLGCKAGMSL 225 The following BLAST results are available for this feature:
BLAST of NO11G01430 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO11G01430 ID=NO11G01430|Name=NO11G01430|organism=Nannochloropsis oceanica|type=gene|length=927bpback to top protein sequence of NO11G01430.1 >NO11G01430.1-protein ID=NO11G01430.1-protein|Name=NO11G01430.1|organism=Nannochloropsis oceanica|type=polypeptide|length=238bpback to top Synonyms
Publications
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