NO11G01390, NO11G01390 (gene) Nannochloropsis oceanica

Overview
NameNO11G01390
Unique NameNO11G01390
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1812
Alignment locationchr11:478168..479979 -

Link to JBrowse

Properties
Property NameValue
DescriptionTransducin/WD40 repeat-like superfamily protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr11genomechr11:478168..479979 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0016787hydrolase activity
GO:0000166nucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR036322WD40_repeat_dom_sf
IPR017986WD40_repeat_dom
IPR001680WD40_repeat
IPR020472G-protein_beta_WD-40_rep
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
Vocabulary: Cellular Component
TermDefinition
GO:0005856cytoskeleton
Homology
BLAST of NO11G01390 vs. NCBI_GenBank
Match: POM59411.1 (WD domain containing hypothetical protein [Phytophthora palmivora var. palmivora])

HSP 1 Score: 334.0 bits (855), Expect = 5.200e-88
Identity = 170/314 (54.14%), Postives = 203/314 (64.65%), Query Frame = 0
Query:   10 RQIPIVCPGHSRPLAGVEYSPVTPDGVFLISACHDKEPMLRNGKTGDWIGTFKGHKGAVWSAKLNKDATFALTGSGDFSAKVWDAITGAELHTFAHKHIVKTVEFSPDSRKFVSGGHEGKLRLFDLV---------EPEAPAVVIDLPPPSSG---GTTSITKVIWDRTDSNRVITGTSDGKVRAWDLRSRQEIHSAEVQGTVMDLELSPTVGDILTICAGDKVTFLDAS-SLLPLKSFQMPMHFREEGGASLHPDRQLFIAGGSDLWVRVFDFNTGAELECHKGHHGPVRCLRYAPEGGSYATGSEDGTVRIW 311
            RQIPIVCPGHSRPLA + YS        LISACHDK PMLR G +GDWIGTF+GHKGAVWSAKL+ DA FA TGS DFS K+WDA+TG  + T  HKH+VK+V FS D  + ++ GHE  LR+FD++         + E    ++ LPPP S        I KV+          TG  DG V  W+L +       +V   VMD+E S   G +LT+ AG +V F D +     L+SF MP+ F EEGGASLHP    F+AGGSD WVRVFDF TG  LE HKGHHGPVRCLRY+P G S+ATGSEDGT+RIW
Sbjct:   14 RQIPIVCPGHSRPLAELHYSRSN----LLISACHDKLPMLRQGSSGDWIGTFEGHKGAVWSAKLDNDAEFAATGSADFSVKIWDALTGDTVTTLEHKHVVKSVAFSMDGTRLLTAGHEKLLRVFDVLGVKEQLQSYKAEGRTGIVVLPPPPSAEMQTAQQIRKVV--VLSDQLAATGEVDGTVTIWNLETYTHTRQFQVDADVMDMEASRD-GQVLTVAAGKQVYFYDVNKDFALLRSFPMPISFAEEGGASLHPTENKFVAGGSDTWVRVFDFETGELLETHKGHHGPVRCLRYSPSGDSFATGSEDGTIRIW 320          
BLAST of NO11G01390 vs. NCBI_GenBank
Match: XP_009527981.1 (hypothetical protein PHYSODRAFT_501150 [Phytophthora sojae] >EGZ18923.1 hypothetical protein PHYSODRAFT_501150 [Phytophthora sojae])

HSP 1 Score: 333.6 bits (854), Expect = 6.800e-88
Identity = 169/312 (54.17%), Postives = 206/312 (66.03%), Query Frame = 0
Query:   10 RQIPIVCPGHSRPLAGVEYSPVTPDGVFLISACHDKEPMLRNGKTGDWIGTFKGHKGAVWSAKLNKDATFALTGSGDFSAKVWDAITGAELHTFAHKHIVKTVEFSPDSRKFVSGGHEGKLRLFDLV---------EPEAPAVVIDLPPPSSGGTTSITKVIWDRTDSNRV-ITGTSDGKVRAWDLRSRQEIHSAEVQGTVMDLELSPTVGDILTICAGDKVTFLDA-SSLLPLKSFQMPMHFREEGGASLHPDRQLFIAGGSDLWVRVFDFNTGAELECHKGHHGPVRCLRYAPEGGSYATGSEDGTVRIW 311
            RQIPIVCPGHSRPLA ++YS     G  LISACHDK PMLR+G +GDWIGTF+GHKGAVWSAKL+ DA FA TGS DFS K+WDA+TG  + T  HKH+VK+V F+ D  + ++ GHE  LR+FD++         + E    ++ LPPP      +  ++      S+R+  TG  DG V  WDL +  +    +V   VMD+E S   G +LT+ AG  V F D       L +F MP+ F EEGGASLHP    F+AGGSD WVRVFDF TG  LE HKGHHGPVRCLRYAP G S+ATGSEDGT+RIW
Sbjct:   17 RQIPIVCPGHSRPLAELQYS----GGNLLISACHDKLPMLRHGDSGDWIGTFEGHKGAVWSAKLDADADFAATGSADFSVKIWDALTGDAVTTLEHKHVVKSVAFTRDGARLLTAGHEKLLRVFDVLGVKEQLQSYKAEGRTGIVVLPPPPLAEMHTAQQIRKVVVLSDRLAATGEVDGTVTVWDLDAYTQTRQFKVDADVMDMEASRD-GQVLTVAAGKLVYFYDVKKDFALLHAFPMPISFAEEGGASLHPTESKFVAGGSDTWVRVFDFETGELLETHKGHHGPVRCLRYAPSGDSFATGSEDGTIRIW 323          
BLAST of NO11G01390 vs. NCBI_GenBank
Match: XP_002898038.1 (WD domain-containing protein, putative [Phytophthora infestans T30-4] >EEY64535.1 WD domain-containing protein, putative [Phytophthora infestans T30-4])

HSP 1 Score: 332.0 bits (850), Expect = 2.000e-87
Identity = 166/312 (53.21%), Postives = 206/312 (66.03%), Query Frame = 0
Query:   10 RQIPIVCPGHSRPLAGVEYSPVTPDGVFLISACHDKEPMLRNGKTGDWIGTFKGHKGAVWSAKLNKDATFALTGSGDFSAKVWDAITGAELHTFAHKHIVKTVEFSPDSRKFVSGGHEGKLRLFDL---------VEPEAPAVVIDLPPPSSGGTTSITKVIWDRTDSNRV-ITGTSDGKVRAWDLRSRQEIHSAEVQGTVMDLELSPTVGDILTICAGDKVTFLDA-SSLLPLKSFQMPMHFREEGGASLHPDRQLFIAGGSDLWVRVFDFNTGAELECHKGHHGPVRCLRYAPEGGSYATGSEDGTVRIW 311
            RQIP+VCPGHSRPLA + YS        LISACHDK PMLR+G +GDWIGTF+GHKGAVWSAKL+ +A FA TGS DFS K+WDA+TG  + T  HKH+VK+V F+ D  + ++ GHE  LR+FD+          + E    ++ LPPP      ++ ++      S+R+  TG  DG V  WDL +  +    +V   VMD+E S   G +LT+ AG +V F D  +    L SF MP+ F EEGGASLHP    F+AGGSD WVRVFDF TG  LE HKGHHGPVRCLRY+P G S+ATGSEDGT+RIW
Sbjct:   15 RQIPVVCPGHSRPLAELHYSRSN----LLISACHDKLPMLRHGGSGDWIGTFEGHKGAVWSAKLDNEAEFAATGSADFSVKIWDALTGDVVTTLEHKHVVKSVAFTSDGARLLTAGHEKLLRVFDVQGVKKQLQTYKAEGRTGIVVLPPPPLAEMPTVQQIRKVVVLSDRLAATGEVDGTVTIWDLHAYTQTRQLKVDADVMDMEASRD-GQVLTVAAGKQVYFYDVKNDFALLNSFPMPISFAEEGGASLHPTESKFVAGGSDTWVRVFDFKTGELLETHKGHHGPVRCLRYSPSGDSFATGSEDGTIRIW 321          
BLAST of NO11G01390 vs. NCBI_GenBank
Match: ETI37286.1 (hypothetical protein F443_16714 [Phytophthora parasitica P1569] >ETK77497.1 hypothetical protein L915_16251 [Phytophthora parasitica] >ETP07133.1 hypothetical protein F441_16550 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 328.9 bits (842), Expect = 1.700e-86
Identity = 165/312 (52.88%), Postives = 207/312 (66.35%), Query Frame = 0
Query:   10 RQIPIVCPGHSRPLAGVEYSPVTPDGVFLISACHDKEPMLRNGKTGDWIGTFKGHKGAVWSAKLNKDATFALTGSGDFSAKVWDAITGAELHTFAHKHIVKTVEFSPDSRKFVSGGHEGKLRLFDLV---------EPEAPAVVIDLPPPSSGGTTSITKVIWDRTDSNRV-ITGTSDGKVRAWDLRSRQEIHSAEVQGTVMDLELSPTVGDILTICAGDKVTFLDAS-SLLPLKSFQMPMHFREEGGASLHPDRQLFIAGGSDLWVRVFDFNTGAELECHKGHHGPVRCLRYAPEGGSYATGSEDGTVRIW 311
            RQIPIVCPGHSRPLA + YS        LISACHDK PMLR+G +GDWIGTF+GHKGAVWSAKL+ +A FA TGS DFS K+WDA+TG  + T  HKH+VK+V F+ D  + ++ GHE  LR+FD++         + +    ++ LPPP     ++  ++      S+R+  TG  DG V  WDL +  +    +V   VMD+E S   G +LT+ AG +V F D +     L +F MP+ F EEGGASLHP    F+AGGSD WVRVFDF TG  LE HKGHHGPVRCLRY+P G S+ATGSEDGT+RIW
Sbjct:   15 RQIPIVCPGHSRPLAELHYSRSN----LLISACHDKLPMLRHGDSGDWIGTFEGHKGAVWSAKLDNEAEFAATGSADFSVKIWDALTGDVVTTLEHKHVVKSVAFTADGARLLTAGHEKILRVFDILGVKEQLQTYKADGRTGIVVLPPPPLAEMSTAQQIRKVVVLSDRLAATGEVDGTVTIWDLDAYTQTRQFKVDADVMDMEASRD-GQVLTVAAGKQVYFYDVNKDFALLHAFPMPVSFAEEGGASLHPTENKFVAGGSDTWVRVFDFKTGELLETHKGHHGPVRCLRYSPSGDSFATGSEDGTIRIW 321          
BLAST of NO11G01390 vs. NCBI_GenBank
Match: XP_008911963.1 (hypothetical protein PPTG_15500 [Phytophthora parasitica INRA-310] >ETL30942.1 hypothetical protein L916_16145 [Phytophthora parasitica] >ETN02748.1 hypothetical protein PPTG_15500 [Phytophthora parasitica INRA-310] >ETO66024.1 hypothetical protein F444_16726 [Phytophthora parasitica P1976] >ETP35233.1 hypothetical protein F442_16540 [Phytophthora parasitica P10297] >KUG00866.1 Serine-threonine kinase receptor-associated protein [Phytophthora nicotianae])

HSP 1 Score: 328.9 bits (842), Expect = 1.700e-86
Identity = 165/312 (52.88%), Postives = 207/312 (66.35%), Query Frame = 0
Query:   10 RQIPIVCPGHSRPLAGVEYSPVTPDGVFLISACHDKEPMLRNGKTGDWIGTFKGHKGAVWSAKLNKDATFALTGSGDFSAKVWDAITGAELHTFAHKHIVKTVEFSPDSRKFVSGGHEGKLRLFDLV---------EPEAPAVVIDLPPPSSGGTTSITKVIWDRTDSNRV-ITGTSDGKVRAWDLRSRQEIHSAEVQGTVMDLELSPTVGDILTICAGDKVTFLDAS-SLLPLKSFQMPMHFREEGGASLHPDRQLFIAGGSDLWVRVFDFNTGAELECHKGHHGPVRCLRYAPEGGSYATGSEDGTVRIW 311
            RQIPIVCPGHSRPLA + YS        LISACHDK PMLR+G +GDWIGTF+GHKGAVWSAKL+ +A FA TGS DFS K+WDA+TG  + T  HKH+VK+V F+ D  + ++ GHE  LR+FD++         + +    ++ LPPP     ++  ++      S+R+  TG  DG V  WDL +  +    +V   VMD+E S   G +LT+ AG +V F D +     L +F MP+ F EEGGASLHP    F+AGGSD WVRVFDF TG  LE HKGHHGPVRCLRY+P G S+ATGSEDGT+RIW
Sbjct:   15 RQIPIVCPGHSRPLAELHYSRSN----LLISACHDKLPMLRHGDSGDWIGTFEGHKGAVWSAKLDNEAEFAATGSADFSVKIWDALTGDVVTTLEHKHVVKSVAFTADGARLLTAGHEKILRVFDILGVKEQLQTYKADGRTGIVVLPPPPLAEMSTAQQIRKVVVLSDRLAATGEVDGTVTIWDLDAYTQTRQFKVDADVMDMEASRD-GQVLTVAAGKQVYFYDVNKDFALLHAFPMPISFAEEGGASLHPTENKFVAGGSDTWVRVFDFKTGELLETHKGHHGPVRCLRYSPSGDSFATGSEDGTIRIW 321          
BLAST of NO11G01390 vs. NCBI_GenBank
Match: ETM37382.1 (hypothetical protein L914_16063 [Phytophthora parasitica])

HSP 1 Score: 327.4 bits (838), Expect = 4.900e-86
Identity = 164/312 (52.56%), Postives = 206/312 (66.03%), Query Frame = 0
Query:   10 RQIPIVCPGHSRPLAGVEYSPVTPDGVFLISACHDKEPMLRNGKTGDWIGTFKGHKGAVWSAKLNKDATFALTGSGDFSAKVWDAITGAELHTFAHKHIVKTVEFSPDSRKFVSGGHEGKLRLFDLV---------EPEAPAVVIDLPPPSSGGTTSITKVIWDRTDSNRV-ITGTSDGKVRAWDLRSRQEIHSAEVQGTVMDLELSPTVGDILTICAGDKVTFLDAS-SLLPLKSFQMPMHFREEGGASLHPDRQLFIAGGSDLWVRVFDFNTGAELECHKGHHGPVRCLRYAPEGGSYATGSEDGTVRIW 311
            RQIPIVCPGHSRPLA + YS        LISACHDK PMLR+G +GDWIGTF+GHKGAVWSAKL+ +  FA TGS DFS K+WDA+TG  + T  HKH+VK+V F+ D  + ++ GHE  LR+FD++         + +    ++ LPPP     ++  ++      S+R+  TG  DG V  WDL +  +    +V   VMD+E S   G +LT+ AG +V F D +     L +F MP+ F EEGGASLHP    F+AGGSD WVRVFDF TG  LE HKGHHGPVRCLRY+P G S+ATGSEDGT+RIW
Sbjct:   15 RQIPIVCPGHSRPLAELHYSRSN----LLISACHDKLPMLRHGDSGDWIGTFEGHKGAVWSAKLDNETEFAATGSADFSVKIWDALTGDVVTTLEHKHVVKSVAFTADGARLLTAGHEKILRVFDILGVKEQLQTYKADGRTGIVVLPPPPLAEMSTAQQIRKVVVLSDRLAATGEVDGTVTIWDLDAYTQTRQFKVDADVMDMEASRD-GQVLTVAAGKQVYFYDVNKDFALLHAFPMPVSFAEEGGASLHPTENKFVAGGSDTWVRVFDFKTGELLETHKGHHGPVRCLRYSPSGDSFATGSEDGTIRIW 321          
BLAST of NO11G01390 vs. NCBI_GenBank
Match: EJK51509.1 (hypothetical protein THAOC_29316 [Thalassiosira oceanica])

HSP 1 Score: 324.3 bits (830), Expect = 4.100e-85
Identity = 169/340 (49.71%), Postives = 217/340 (63.82%), Query Frame = 0
Query:    9 NRQIPIVCPGHSRPLAGVEY----------SPVTPDGVFLISACHDKEPMLRNGKTGDWIGTFKGHKGAVWSAKLNKDATFALTGSGDFSAKVWDAITGAELHTFAHKHIVKTVEFSPDSRKFVSGGHEGKLRLFDLVEPEAPAVVIDLPPPSSGGTTSITKVIWDRTDSNRVITGTSDGKVRAWDL----RSRQEIHSAEVQGT-VMDLELS--PTVGDILTICAGDKVTFLDASSLLPLKSFQMPMHFREEGGASLHPDRQLFIAG-------------------GSDLWVRVFDFNTGAELECHKGHHGPVRCLRYAPEGGSYATGSEDGTVRIWAT 313
            +RQIPIVCPGH+RP+A V++          SP T    FL+SACHDK PMLR+  TGDWIGTF+GHKGAVWS + +     A T SGDFS +VWDAITG  L+TFAH+H+VK V++S DSR+  +GGHEG LR+FD+  P+A  +       +S    SI+K  W   D++ V+    DG +R W++     S+Q + S +V    + D+EL    +   ILT+ +GD V+F DAS+   LKS +MP+HFREEGGASLHP    FI G                   GSDL V V+D+ TG  LE H+GHHGPVRCLRY P+G SYATGSEDGT+R+W T
Sbjct:    7 SRQIPIVCPGHTRPVAEVQFYTVDEPAERGSPDTSPRHFLVSACHDKSPMLRDAGTGDWIGTFRGHKGAVWSCRFDPSGYLAATASGDFSVQVWDAITGRSLYTFAHRHVVKCVDWSLDSRRLATGGHEGLLRVFDVENPKADPLTF---VQASDKKISISKCSW--IDNSTVLAAGEDGTIRFWNVDESDPSKQLVKSIKVGDMGIRDIELKTLDSGKTILTVSSGDTVSFYDASTCQKLKSHKMPIHFREEGGASLHPSGTKFITGGGRRGGSMASGASDGGGELGSDLLVYVYDYETGKVLETHRGHHGPVRCLRYHPDGKSYATGSEDGTIRLWTT 341          
BLAST of NO11G01390 vs. NCBI_GenBank
Match: OQS01638.1 (WD domain-containing protein [Achlya hypogyna])

HSP 1 Score: 323.9 bits (829), Expect = 5.400e-85
Identity = 169/317 (53.31%), Postives = 207/317 (65.30%), Query Frame = 0
Query:   10 RQIPIVCPGHSRPLAGVEYSP-VTPD-------GVFLISACHDKEPMLRNGKTGDWIGTFKGHKGAVWSAKLNKDATFALTGSGDFSAKVWDAITGAELHTFAHKHIVKTVEFSPDSRKFVSGGHEGKLRLFDLVEPEAPAVVIDLPPPSSGGTTSITKVIWDRTDSNRVITGTSDGKVRAWDLRSRQEIHS--AEVQGTVMDLELSPTVGDILTICAGDKVTFLDASSLLPLKSFQMPMHFREEGGASLHPDRQLFIAGGSDLWVRVF--DFNTGAELECHKGHHGPVRCLRYAPEGGSYATGSEDGTVRIWATQV 315
            RQIPIVCPGHSRPL  V+Y P  TP+          L+S CHDK PMLR GK+G+WIGTF+GHKGAVWSAKLN D + A+TGSGDFSAK+WDA+TG  L TF HKHIVK+VEF  +     +GGHE  LR+FDL +     +       +  G   I ++         V+TG + G V  W++ ++  I +   +V G VMD+E S   G +LT+ AG KV+F D ++   +    MP+ F  EGGASLHP    FIAGGSD WVRVF  +   G ELECHKGHHGPVRCLRYAP G S+ATGSEDGT+RIW T V
Sbjct:    7 RQIPIVCPGHSRPLTEVQYCPNPTPNPQATGHVHYLLVSGCHDKLPMLRCGKSGNWIGTFEGHKGAVWSAKLNGDGSLAMTGSGDFSAKLWDAVTGDNLRTFDHKHIVKSVEFINNGAWVATGGHEKLLRVFDLADAGTTPL---FTMTADEGIRKIVEI--PGLPQVTVVTGDTAGNVVVWNVETQTRIAAVHVDVAGGVMDMEAS-RGGRVLTVAAGAKVSFFDTTTWTLIFDVSMPITFNAEGGASLHPTLDRFIAGGSDTWVRVFAWEGGVGKELECHKGHHGPVRCLRYAPNGESFATGSEDGTIRIWQTDV 317          
BLAST of NO11G01390 vs. NCBI_GenBank
Match: XP_024371090.1 (serine-threonine kinase receptor-associated protein-like [Physcomitrella patens] >PNR57391.1 hypothetical protein PHYPA_004385 [Physcomitrella patens])

HSP 1 Score: 323.2 bits (827), Expect = 9.200e-85
Identity = 152/307 (49.51%), Postives = 204/307 (66.45%), Query Frame = 0
Query:    6 EARNRQIPIVCPGHSRPLAGVEYSPVTPDGVFLISACHDKEPMLRNGKTGDWIGTFKGHKGAVWSAKLNKDATFALTGSGDFSAKVWDAITGAELHTFAHKHIVKTVEFSPDSRKFVSGGHEGKLRLFDLVEPEAPAVVIDLPPPSSGGTTSITKVIWDRTDSNRVITGTSDGKVRAWDLRSRQEIHSAEVQGTVMDLELSPTVGDILTICAGDKVTFLDASSLLPLKSFQMPMHFREEGGASLHPDRQLFIAGGSDLWVRVFDFNTGAELECHKGHHGPVRCLRYAPEGGSYATGSEDGTVRIWAT 313
            E R  Q+P+VC GHSRP+  + YSP+TPDG FL+SA  D +PMLRNG+TGDWIGTF GHKGAVW+A L+  A    T S DFSA+VWDA+TG EL++F HKHIV+T  FS  +   ++GG E  LR+FDL  P+AP  +++  P      T I   +W  +D   + +    G VR WD+R++  + + + + +   +E+S   G  +T   G+ V F DA+    +KS+ MP   R    ASL P R  FIAGG D+WVR+FDF+TG E+EC+KGHHGPV C+R++P G SYA+GSEDGT+RIW T
Sbjct:    2 EKRKAQVPLVCHGHSRPIVDLSYSPITPDGFFLVSASKDGKPMLRNGETGDWIGTFDGHKGAVWAACLDTPAMRCATASADFSARVWDALTGDELYSFEHKHIVRTCAFSESTTHLLTGGAEKVLRIFDLARPDAPPTLLESKP-----ETPIRAAVWHHSDQTILSSSNDIGGVRVWDVRTKSVVRTLDTKSSCTSVEVSRD-GRYITTADGNTVKFWDANHFGLVKSYSMP---RPVESASLFPSRGKFIAGGDDMWVRLFDFDTGDEIECNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWKT 299          
BLAST of NO11G01390 vs. NCBI_GenBank
Match: XP_009845437.1 (hypothetical protein H257_18127 [Aphanomyces astaci] >ETV65078.1 hypothetical protein H257_18127 [Aphanomyces astaci])

HSP 1 Score: 322.8 bits (826), Expect = 1.200e-84
Identity = 172/337 (51.04%), Postives = 207/337 (61.42%), Query Frame = 0
Query:    3 DNKEARNRQIPIVCPGHSRPLAGVEY----------SPVTP-DGVFLISACHDKEPMLRNGKTGDWIGTFKGHKGAVWSAKLNKDATFALTGSGDFSAKVWDAITGAELHTFAHKHIVKTVEFSPDSRKFVSGGHEGKLRLFDL-VEPEAPAV----------VIDLPPPSSGGTTSITKVIWDRTDSNRVITGTSDGKVRAWDLRSRQEIHSAEVQGT-VMDLELSPTVGDILTICAGDKVTFLDASSLLPLKSFQMPMHFREEGGASLHPDRQLFIAGGSDLWVRVFDFNTGAELECHKGHHGPVRCLRYAPEGGSYATGSEDGTVRIWATQVDA 317
            D    + RQIPIVCPGHSRPLA V+Y          SP  P D   LISACHDK PMLR G++G+WIGTF+GHKGA WSAKL+ D   A T S DFS K+W+A+TG  + TF HKH+VK+VEF  +S    +GGHE  LR+FDL  E  AP            ++++P P    T               V TG + G V  WD+ ++  + +  V  + VMD+E S   G ILT+ AG KV F D +S        MP+ F EEGGASLHP    FIAGGSD WVRVF  + GA LECHKGHHGPVRCLRYAP G S+ATGSEDGT+RIW T+  A
Sbjct:    9 DTSNNQRRQIPIVCPGHSRPLAEVQYCPSPSVNPNASPTEPADHYLLISACHDKLPMLRCGRSGNWIGTFEGHKGATWSAKLSADGLLAATASADFSVKIWNAVTGDVVRTFDHKHVVKSVEFLRNSAWIATGGHEKLLRVFDLGSEATAPLYQLQTDDVIRKIVEIPSPKGAVT---------------VATGDTAGNVVVWDVETQARVATLHVSSSGVMDMEAS-RGGTILTVAAGSKVHFFDTTSWTETSHVDMPIAFTEEGGASLHPSLDRFIAGGSDTWVRVFGLD-GALLECHKGHHGPVRCLRYAPNGDSFATGSEDGTIRIWQTETAA 328          
The following BLAST results are available for this feature:
BLAST of NO11G01390 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
POM59411.15.200e-8854.14WD domain containing hypothetical protein [Phytoph... [more]
XP_009527981.16.800e-8854.17hypothetical protein PHYSODRAFT_501150 [Phytophtho... [more]
XP_002898038.12.000e-8753.21WD domain-containing protein, putative [Phytophtho... [more]
ETI37286.11.700e-8652.88hypothetical protein F443_16714 [Phytophthora para... [more]
XP_008911963.11.700e-8652.88hypothetical protein PPTG_15500 [Phytophthora para... [more]
ETM37382.14.900e-8652.56hypothetical protein L914_16063 [Phytophthora para... [more]
EJK51509.14.100e-8549.71hypothetical protein THAOC_29316 [Thalassiosira oc... [more]
OQS01638.15.400e-8553.31WD domain-containing protein [Achlya hypogyna][more]
XP_024371090.19.200e-8549.51serine-threonine kinase receptor-associated protei... [more]
XP_009845437.11.200e-8451.04hypothetical protein H257_18127 [Aphanomyces astac... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL116nonsL116Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL115nonsL115Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR010ncniR010Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR019ngnoR019Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR018ngnoR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002143NSK002143Nannochloropsis salina (N. salina CCMP1776)gene
NSK002127NSK002127Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO11G01390.1NO11G01390.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|591140gene_5021Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100016g10gene5406Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO11G01390.1NO11G01390.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO11G01390 ID=NO11G01390|Name=NO11G01390|organism=Nannochloropsis oceanica|type=gene|length=1812bp
CAGGTTTCGGTCTTCGACTACCAAGCAAAATCGTACAGGCAACACCAGCG
ACTTCCATCACAGGTGTGGCAAAGCAAGTGGACTGAAGGGGGAGGAGACT
GAAGAAAGGAGCACCAACAGTTGCGGTACCAGCAACAAGAGGAGCAATAA
TCCATGACGGACAACAAGGAAGCGCGGAACCGGCAAATTCCTATAGgtaa
gagctctattggttttagagagagagaagttgaaaggcatttcatccggc
taggggaatggcatccggctcggggatgaaagaccgcggagacctcgtgc
gagatatgagtgaaggccgcttgacaaaaaaagcgttaagtgaggacacc
aggtgcgctttatggtcttcgggagtctgatttgccctttgacccttccc
aatcacttgctttttttaaagTCTGCCCCGGTCACAGCCGGCCTTTGGCA
GGTGTGGAATATAGCCCGGTGACGCCCGACGGGGTCTTCCTCATTAGCGC
TTGTCATGATAAAGAGCCCATGTTGCGAAATGGAAAGACCGGGGATTGGA
TCGGAACTTTTAAGGGGCACAAAGGCGCGGTTTGGAGCGCCAAGTTGAAT
AAGGACGCAACATTTGCCCTGACGGGCTCGGGGGACTTCAGgtgcgtgag
agggagaaggaggaggaaggaagaagggaggtttggaccaggattctacc
ttatttccacatctggcccacgcatatgtatacacgttgcccacccgctc
tccctcctccccccctcgccacctcctcgctacctcccctccagCGCCAA
AGTCTGGGACGCCATCACCGGCGCCGAGCTTCACACTTTCGCGCACAAAC
ACATCGTGAAGACCGTGGAGTTTTCGCCTGACTCCCGGAAATTTGTCTCT
GGTGGACACGAGGGAAAATTGCGTTTGTTCGATTTGGTGGAGCCCGAGGC
GCCGGCTGTGGTGATTGACCTGCCCCCTCCCTCCTCCGGTGGCACCACGT
CAATCACGAAAGTCATTTGGGACCGCACAGATAGCAACAGGGTCATCACA
GGCACGAGTGATGGGAAGGTACGGGCGTGGGATTTGAGGAGCAGGCAGGA
GATCCACTCGGCGGAGGTGCAAGgtgagaaggcggcggagggaagtagga
tggaaagaagatgggaggggggatggctgtcgtcaacaaatgctctgctc
gtgtttcccacacttacgtctttcattctttttcgtcctttcattgacgt
ctacaaaatagGAACCGTGATGGACCTGGAGCTCTCTCCTACAGTTGGCG
ATATTCTTACCATCTGCGCCGGCGACAAGGTGACCTTCCTCGACGCCTCC
TCACTCCTCCCCCTCAAGTCCTTCCAAATGCCCATGCACTTCCGGGAAGA
AGGCGGTGCATCCCTGCATCCCGATCGCCAACTCTTTATTGCTGGAGGAT
CCGATTTGTGGGTGCGGGTCTTCGATTTTAATACCGGCGCGGAGCTTGAG
TGTCATAAAGGCCATCATGGCCCAGTACGATGTCTGCGGTATGCACCTGA
AGGTGGGAGTTACGCGACGGGGAGTGAGGATGGAACGGTTCGTATCTGGG
CGACGCAGGTGGATGCATAGCGATTCTGCGCTTCTGGTGGGGAGGTTGTG
ACCTTCCCACTTCCTCCTTCTCCAAACATTCGTTTCTATGTTGTAAAAGC
ATGGCAAGCATAACAATACATAAAGTGCTGTTCGCTCCAATCTAAGATTA
GGTCGAAAAAGAAATGAGACAATTGCGACGCATTCCAAAAAATAAAACAT
TTTCGACACCAA
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protein sequence of NO11G01390.1

>NO11G01390.1-protein ID=NO11G01390.1-protein|Name=NO11G01390.1|organism=Nannochloropsis oceanica|type=polypeptide|length=317bp
MTDNKEARNRQIPIVCPGHSRPLAGVEYSPVTPDGVFLISACHDKEPMLR
NGKTGDWIGTFKGHKGAVWSAKLNKDATFALTGSGDFSAKVWDAITGAEL
HTFAHKHIVKTVEFSPDSRKFVSGGHEGKLRLFDLVEPEAPAVVIDLPPP
SSGGTTSITKVIWDRTDSNRVITGTSDGKVRAWDLRSRQEIHSAEVQGTV
MDLELSPTVGDILTICAGDKVTFLDASSLLPLKSFQMPMHFREEGGASLH
PDRQLFIAGGSDLWVRVFDFNTGAELECHKGHHGPVRCLRYAPEGGSYAT
GSEDGTVRIWATQVDA*
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Synonyms
Publications