NO11G01390, NO11G01390 (gene) Nannochloropsis oceanica

Overview
NameNO11G01390
Unique NameNO11G01390
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1812
Alignment locationchr11:478168..479979 -

Link to JBrowse

Properties
Property NameValue
DescriptionTransducin/WD40 repeat-like superfamily protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr11genomechr11:478168..479979 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0016787hydrolase activity
GO:0000166nucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR036322WD40_repeat_dom_sf
IPR017986WD40_repeat_dom
IPR001680WD40_repeat
IPR020472G-protein_beta_WD-40_rep
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
Vocabulary: Cellular Component
TermDefinition
GO:0005856cytoskeleton
Homology
BLAST of NO11G01390 vs. NCBI_GenBank
Match: EWM25073.1 (cell division protein [Nannochloropsis gaditana])

HSP 1 Score: 469.5 bits (1207), Expect = 8.000e-129
Identity = 221/285 (77.54%), Postives = 246/285 (86.32%), Query Frame = 0
Query:    1 MTDNKEARNRQIPIVCPGHSRPLAGVEYSPVTPDGVFLISACHDKEPMLRNGKTGDWIGTFKGHKGAVWSAKLNKDATFALTGSGDFSAKVWDAITGAELHTFAHKHIVKTVEFSPDSRKFVSGGHEGKLRLFDLVEPEAPAVVIDLPPPSSGGTTSITKVIWDRTDSNRVITGTSDGKVRAWDLRSRQEIHSAEVQGTVMDLELSPTVGDILTICAGDKVTFLDASSLLPLKSFQMPMHFREEGGASLHPDRQLFIAGGSDLWVRVFDFNTGAELECHKGHHGP 286
            M +NKE+RNRQIPIVCPGHSRPLAGVEYSPVTPDGVFLISACHDKEPMLRNG+TGDWIGTFKGHKGAVWSAKLNKDATFALTGSGDFSA+VWDAITGAEL  F HKHIV+TVEF+PDSR+FVSGG+EGKLR++DL+EP AP + +DL  P SG  T+ +K +WD++D                  R+R+E   AEVQG VMDLELSP VGDILT+CAGDKVTFLD ++LLP+KSF MPMHFREEGGASLHPDRQLFIAGGSDLWVRVFD+NTGAELECHKGHHGP
Sbjct:    1 MAENKESRNRQIPIVCPGHSRPLAGVEYSPVTPDGVFLISACHDKEPMLRNGETGDWIGTFKGHKGAVWSAKLNKDATFALTGSGDFSARVWDAITGAELEHFPHKHIVRTVEFAPDSRRFVSGGNEGKLRVYDLMEPSAPPMTMDL--PKSG--TTFSKAVWDQSDPXXXXXXXXXXXXXXXXXRARKETQVAEVQGNVMDLELSPKVGDILTVCAGDKVTFLDTATLLPIKSFPMPMHFREEGGASLHPDRQLFIAGGSDLWVRVFDYNTGAELECHKGHHGP 281          
BLAST of NO11G01390 vs. NCBI_GenBank
Match: XP_002295040.1 (WD40-repeat protein [Thalassiosira pseudonana CCMP1335] >EED87820.1 WD40-repeat protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 360.5 bits (924), Expect = 5.200e-96
Identity = 178/320 (55.62%), Postives = 228/320 (71.25%), Query Frame = 0
Query:    8 RNRQIPIVCPGHSRPLAGVEYSPV--TPDG-----VFLISACHDKEPMLRNGKTGDWIGTFKGHKGAVWSAKLNKDATFALTGSGDFSAKVWDAITGAELHTFAHKHIVKTVEFSPDSRKFVSGGHEGKLRLFDLVEPE-APAVVIDLPPPSSGGTTSITKVIWDRTDSNRVITGTSDGKVRAWDL----RSRQEIHSAEVQGTVMDLE---LSPTVGDILTICAGDKVTFLDASSLLPLKSFQMPMHFREEGGASLHPDRQLFIAGGSDLWVRVFDFNTGAELECHKGHHGPVRCLRYAPEGGSYATGSEDGTVRIWAT 313
            + RQIPIVCPGH+RPLA +++  V   P+G      FL+SACHDK PM+R+ ++GDWIGTFKGHKGAVWS +L+  A    T SGDFS KVWDAITG+ LH+F HKH+VK+ ++SPDS++  +GG+EG LR+FD+V PE AP   +     S     SI+K  W   D++ V+   SDG +R W++     ++Q   + +V+  V D+E   LS     ILT+ AGDKVTF D ++   + S++MP+HFREEGGASLHP    FIAGGSDLWVRVFDF +G ELECHKGHHGPVRCLRY P+G SYATGSEDGT+R+W T
Sbjct:   12 KGRQIPIVCPGHTRPLAELQFCSVNDNPNGDDEPRTFLVSACHDKCPMVRDAESGDWIGTFKGHKGAVWSCRLDPAAFLGATASGDFSVKVWDAITGSPLHSFPHKHVVKSCDWSPDSKRLATGGNEGILRVFDIVHPEKAPLEFVQ----SEKEVVSISKCNW--IDNHTVLAACSDGSIRFWNVDASDPTQQLTRTLQVKDGVRDMELQALSSNNKTILTVAAGDKVTFFDMATGDMIHSYKMPIHFREEGGASLHPSGAKFIAGGSDLWVRVFDFESGEELECHKGHHGPVRCLRYHPDGKSYATGSEDGTIRLWKT 325          
BLAST of NO11G01390 vs. NCBI_GenBank
Match: GAX99704.1 (WD domain-containing protein, putative [Pythium insidiosum])

HSP 1 Score: 356.7 bits (914), Expect = 7.500e-95
Identity = 174/312 (55.77%), Postives = 217/312 (69.55%), Query Frame = 0
Query:   10 RQIPIVCPGHSRPLAGVEYSPVTPDGVFLISACHDKEPMLRNGKTGDWIGTFKGHKGAVWSAKLNKDATFALTGSGDFSAKVWDAITGAELHTFAHKHIVKTVEFSPDSRKFVSGGHEGKLRLFDL---------VEPEAPAVVIDLPPPSSGGTTSITKVIWDRTDSNRV-ITGTSDGKVRAWDLRSRQEIHSAEVQGTVMDLELSPTVGDILTICAGDKVTFLD-ASSLLPLKSFQMPMHFREEGGASLHPDRQLFIAGGSDLWVRVFDFNTGAELECHKGHHGPVRCLRYAPEGGSYATGSEDGTVRIW 311
            RQIPIVCPGHSRPLA V+YS +TPDGVFLISACHDK PMLR G +GDWIGTF+GHKGAVWSA ++  A FA TGS DFS K+WDA+TG  + T  HKHIVK V F+PD  + ++ GHE  LR+FDL            +    ++ +PPP+     +  ++      S+R+ +TG  DG +  W+L S  ++   +V   VMD+E S   G +LT+ AG KV F D A++  PL+SF+MP+ F EEGGASLHP    FIAGGSD WVRVF+F +G  LE HKGHHGPVRCLRY+P G S+ATGSEDGT+RIW
Sbjct:   15 RQIPIVCPGHSRPLAEVQYSAITPDGVFLISACHDKLPMLRRGDSGDWIGTFEGHKGAVWSATIDASAQFAATGSADFSVKLWDALTGDVITTLEHKHIVKAVAFTPDGTRLLTAGHEKLLRVFDLQTVKEQLEMYRADGRTGIVVMPPPAVAQMATKEQIRKVVVLSDRLAVTGEVDGTITVWNLDSSDKVTEFKVDAGVMDMEASRR-GTVLTVAAGKKVYFFDAAANFAPLRSFEMPISFAEEGGASLHPHEDKFIAGGSDTWVRVFNFASGELLETHKGHHGPVRCLRYSPTGHSFATGSEDGTIRIW 325          
BLAST of NO11G01390 vs. NCBI_GenBank
Match: CCI45985.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 355.9 bits (912), Expect = 1.300e-94
Identity = 175/308 (56.82%), Postives = 218/308 (70.78%), Query Frame = 0
Query:   10 RQIPIVCPGHSRPLAGVEYSPVTPDGVFLISACHDKEPMLRNGKTGDWIGTFKGHKGAVWSAKLNKDATFALTGSGDFSAKVWDAITGAELHTFAHKHIVKTVEFSPDSRKFVSGGHEGKLRLFDLVEPEAPAVVIDLPPPSSGGTTSITKVIWDRTDSNRVITGTSDGKVRAWDLRSRQEIHSAEVQGT----VMDLELSPTVGDILTICAGDKVTFLDASSLLPLK-SFQMPMHFREEGGASLHPDRQLFIAGGSDLWVRVFDFNTGAELECHKGHHGPVRCLRYAPEGGSYATGSEDGTVRIWAT 313
            RQIPIVCPGHSRPLA ++YS +T DGVFLISACHDK PMLR+G TGDWIGTF+GHKGAVWSA+LN DAT A TGS DFS K+WDAI+G  + T  H+H+VK+V F+PD  + ++GGHE  LR+FDL    A    I         T  I + +   +D+  V+TG  DG +  W++ +++   S +V G     +MD+E S   G+ILT+ AG+KV F D +    L  SF MPM F+EEGGASLHP    FIAGGSD WVRVF++ TG  +ECHKGHHGP+RCLRYAP G ++ATGSEDGT+RIW T
Sbjct:   22 RQIPIVCPGHSRPLAELQYSCITTDGVFLISACHDKLPMLRHGHTGDWIGTFQGHKGAVWSAQLNNDATLAATGSADFSVKLWDAISGDLIATLEHRHVVKSVAFTPDGSRLITGGHERILRVFDLGPIIAQREAIHPIATCELHTKEIIRKVVTISDT-IVVTGQVDGTISVWNVETKELQKSFKVDGQDTGGIMDMESSRN-GEILTVAAGNKVAFFDIARDYALNASFVMPMSFKEEGGASLHPTESKFIAGGSDTWVRVFEYQTGEMIECHKGHHGPIRCLRYAPLGDTFATGSEDGTIRIWQT 327          
BLAST of NO11G01390 vs. NCBI_GenBank
Match: XP_002182271.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC46172.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 354.4 bits (908), Expect = 3.700e-94
Identity = 167/319 (52.35%), Postives = 219/319 (68.65%), Query Frame = 0
Query:    4 NKEARNRQIPIVCPGHSRPLAGVEYSPVTPD-GVFLISACHDKEPMLRNGKTGDWIGTFKGHKGAVWSAKLNKDATFALTGSGDFSAKVWDAITGAELHTFAHKHIVKTVEFSPDSRKFVSGGHEGKLRLFDLVEPEAPAVVIDLPPPSSGGTTSITKVIWDRTDSNRVITGTSDGKVRAWDLRSR-----QEIHSAEVQGT--VMDLELSPTVG--DILTICAGDKVTFLDASSLLPLKSFQMPMHFREEGGASLHPDRQLFIAGGSDLWVRVFDFNTGAELECHKGHHGPVRCLRYAPEGGSYATGSEDGTVRIWAT 313
            N     R+IPIVCPGH+RPLA +++  + P+   FL+SACHD+ PMLR+G +GDWIGTF GHKGAVWS +++   + A T SGDFS  VWDAITG +L    HKHIVKT +FSP+S+   +GGHEG LR++DL +PE   + I   P       +ITK  W     + +I G  DGK+R W   ++       +H+   +GT  + D+E+S T    D+LT+ AG++V F D  +   LKS++MP+HFREEGGASLHP    F+AGGSDLWVRVFD+ TG ELE +KGHHGP+RC+RY+P G SYATGSEDGT+R+W T
Sbjct:    3 NDSKNTRKIPIVCPGHTRPLAELQFCYIAPEQRTFLVSACHDRLPMLRDGTSGDWIGTFVGHKGAVWSCRMDPSGSLAATASGDFSVHVWDAITGKDLFQLPHKHIVKTCDFSPNSKYLATGGHEGILRIYDLTQPEQAPITI---PQDPSKKITITKCNW--LSEDLLIVGCGDGKIRFWQPLAQGGPATVPVHTMSTEGTSEIRDMEVSRTTAGQDVLTVAAGERVYFFDLQTRTCLKSYKMPIHFREEGGASLHPSGNKFVAGGSDLWVRVFDYQTGEELELNKGHHGPIRCIRYSPTGESYATGSEDGTIRLWKT 316          
BLAST of NO11G01390 vs. NCBI_GenBank
Match: GAX27352.1 (serine-threonine kinase receptor-associated protein [Fistulifera solaris])

HSP 1 Score: 347.4 bits (890), Expect = 4.600e-92
Identity = 167/323 (51.70%), Postives = 218/323 (67.49%), Query Frame = 0
Query:    2 TDNKEARNRQIPIVCPGHSRPLAGVEYSPVTPDG-VFLISACHDKEPMLRNGKTGDWIGTFKGHKGAVWSAKLNKDATFALTGSGDFSAKVWDAITGAELHTFAHKHIVKTVEFSPDSRKFVSGGHEGKLRLFDLVEPEAPAVVIDLPPPSSGGTTSITKVIWDRTDSNRVITGTSDGKVRAWDLRSRQE----IHSAEVQGTV----MDLELSPTVGDILTICAGDKVTFLDASSLLPLKSFQMPMHFREEGGASLHPDRQLFIAGGSDLWVRVFDFNTGAELECHKGHHGPVRCLRYAPEGGSYATGSEDGTVRIWATQVD 316
            T  K    RQIPIVCPGH+RPLA +++  V+ +    LISACHDK+PM+R+G TGDWIGTF GHKGAVW  +L+     A T SGD+S  VWDAITG +LH   HKHIVKT +F+P+SR   +GGHEG +R++DL+ P+  A+ I     SSG    I K +W    +N ++ G +DG +R W + S       IH  + +  V    MD+  +     IL++ AGDKV F + +    + S++MP+HFREEGG SLHP  ++F+AGGSDLWVRVF   TG ELECHKGHHGP+RCLRY+P+G +YA+GSEDGT+RIW T  D
Sbjct:    6 TAEKNHPGRQIPIVCPGHTRPLAELQFIHVSGENRTLLISACHDKKPMVRDGITGDWIGTFVGHKGAVWCCRLDPSGNLAATASGDYSVHVWDAITGKDLHQLPHKHIVKTCDFTPNSRWLATGGHEGIIRVYDLLHPKNAALEI---AQSSGPKIGINKCLW--ISNNVLLAGGTDGCIRFWQIDSLSSPGKLIHVLKTENGVEIRDMDITSTTASRQILSVAAGDKVYFFNLADRSLMHSYKMPVHFREEGGVSLHPSGEMFVAGGSDLWVRVFATATGQELECHKGHHGPIRCLRYSPDGSTYASGSEDGTIRIWKTHPD 323          
BLAST of NO11G01390 vs. NCBI_GenBank
Match: GAX13324.1 (serine-threonine kinase receptor-associated protein [Fistulifera solaris])

HSP 1 Score: 341.7 bits (875), Expect = 2.500e-90
Identity = 163/317 (51.42%), Postives = 218/317 (68.77%), Query Frame = 0
Query:    8 RNRQIPIVCPGHSRPLAGVEYSPVTPDG-VFLISACHDKEPMLRNGKTGDWIGTFKGHKGAVWSAKLNKDATFALTGSGDFSAKVWDAITGAELHTFAHKHIVKTVEFSPDSRKFVSGGHEGKLRLFDLVEPEAPAVVIDLPPPSSGGTTSITKVIWDRTDSNRVITGTSDGKVRAWDLRSRQE----IHSAEVQG--TVMDLELSPTVG--DILTICAGDKVTFLDASSLLPLKSFQMPMHFREEGGASLHPDRQLFIAGGSDLWVRVFDFNTGAELECHKGHHGPVRCLRYAPEGGSYATGSEDGTVRIWATQVD 316
            + RQIPIVCPGH+RPLA +++  V+ +    LISACHDK+PM+R+G TGDWIGTF GHKGAVW  +L+     A T SGD+S  VWDAITG +L+   H HIVKT +F+P+S+   +GGHEG +R++DL+ P+   + I   P SSG    I K  W    +N ++ G +DG +R W + S +     IH  + +    + D+E++ T     IL++ AGDKV F + +    + S++MP+HFREEGG SLHP  +LF+AGGSDLWVRVF   TG ELECHKGHHGP+RCLRY+P+G +YA+GSEDGT+RIW T  D
Sbjct:   11 QGRQIPIVCPGHTRPLAELQFIHVSGENRTLLISACHDKKPMVRDGITGDWIGTFVGHKGAVWCCRLDPSGNLAATASGDYSVHVWDAITGKDLYQLPHNHIVKTCDFTPNSKWLATGGHEGIIRIYDLLYPKNAPLEI---PQSSGSKIGINKCSW--LSNNVLLAGGADGCIRFWQIDSLKSPGNLIHVLKTEDGVEIRDMEITNTTASRQILSVAAGDKVYFFNLADRSLMHSYKMPIHFREEGGVSLHPSGELFVAGGSDLWVRVFATATGQELECHKGHHGPIRCLRYSPDGSTYASGSEDGTIRIWKTHPD 322          
BLAST of NO11G01390 vs. NCBI_GenBank
Match: CBN75289.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 339.0 bits (868), Expect = 1.600e-89
Identity = 172/310 (55.48%), Postives = 205/310 (66.13%), Query Frame = 0
Query:    7 ARNRQIPIVCPGHSRPLAGVEYSPVTPDGVFLISACHDKEPMLRNGKTGDWIGTFKGHKGAVWSAKLNKDATFALTGSGDFSAKVWDAITGAELHTFAHKHIVKTVEFSPDSRKFVSGGHEGKLRLFDLVEPEAPAVVIDLPPPSSGG--TTSITKVI----WDRTDSNRVITGTSDGKVRAWDLRSRQEIHSAEVQGTVMDLELSPTVGDILTICAGDKVTFLDASSLLPLKSFQMPMHFREEGGASLHPDRQLFIAGGSDLWVRVFDFNTGAELECHKGHHGPVRCLRYAPEGGSYATGSEDGTVRIW 311
            A  RQIPIVCPGHSRPLA V Y P TPDG FLIS CH K PM+RNG TGDWIGTF GHKGAVW   L+     A T S DFSA++WDA+TG ++H F HKHIVKTV F+ D  K  + GHEG LR+FD   P +P   I + P   GG  T  +++VI    W + D N V+TG++DG VR WD+RS ++I   +V G VMDLE+S     I T+ AGD V                  HF + GG       + F+AGGSDLWVRV DF+TGAELEC KGHHGPVRCLRYAP+G +YATGSEDGT+R+W
Sbjct:    6 AAARQIPIVCPGHSRPLAEVSYCPETPDGTFLISGCHAKTPMIRNGSTGDWIGTFVGHKGAVWGVALDDTGLLAATASADFSARLWDAVTGNQVHEFVHKHIVKTVHFAADRSKLATAGHEGILRIFDTASPGSPPTEITVFP---GGEETPKVSRVISKARWGK-DPNTVLTGSADGFVRVWDVRSGEKIRKVQVAGAVMDLEMS-WDKKIATVAAGDTV------------------HFFDTGG-------KRFMAGGSDLWVRVLDFDTGAELECLKGHHGPVRCLRYAPDGKTYATGSEDGTIRLW 285          
BLAST of NO11G01390 vs. NCBI_GenBank
Match: POM66263.1 (WD domain containing hypothetical protein [Phytophthora palmivora var. palmivora])

HSP 1 Score: 337.0 bits (863), Expect = 6.200e-89
Identity = 170/312 (54.49%), Postives = 206/312 (66.03%), Query Frame = 0
Query:   10 RQIPIVCPGHSRPLAGVEYSPVTPDGVFLISACHDKEPMLRNGKTGDWIGTFKGHKGAVWSAKLNKDATFALTGSGDFSAKVWDAITGAELHTFAHKHIVKTVEFSPDSRKFVSGGHEGKLRLFDLV---------EPEAPAVVIDLPPPSSGGTTSITKVIWDRTDSNRV-ITGTSDGKVRAWDLRSRQEIHSAEVQGTVMDLELSPTVGDILTICAGDKVTFLDAS-SLLPLKSFQMPMHFREEGGASLHPDRQLFIAGGSDLWVRVFDFNTGAELECHKGHHGPVRCLRYAPEGGSYATGSEDGTVRIW 311
            RQIPIVCPGHSRPLA + YS        LISACHDK PMLR G +GDWIGTF+GHKGAVWSAKL+ DA FA TGS DFS K+WDA+TG  + T  HKH+VK+V FS D  + ++ GHE  LR+FD++         + E    ++ LPPP S    +  ++      S+R+  TG  DG V  WDL +       +V   VMD+E S   G +LT+ AG +V F D +     L+SF MP+ F EEGGASLHP    F+AGGSD WVRVFDF TG  LE HKGHHGPVRCLRY+P G S+ATGSEDGT+RIW
Sbjct:   14 RQIPIVCPGHSRPLAELHYSRSN----LLISACHDKLPMLRQGSSGDWIGTFEGHKGAVWSAKLDNDAEFAATGSADFSVKIWDALTGDTVTTLEHKHVVKSVAFSMDGTRLLTAGHEKLLRVFDVLGVKEQLQSYKAEGRTGIVVLPPPPSAEMQTAQQIRKVVVLSDRLAATGEVDGTVTIWDLETYTHTRQFQVDADVMDMEASRD-GQVLTVAAGKQVYFYDVNKDFALLRSFPMPISFAEEGGASLHPKENKFVAGGSDTWVRVFDFETGELLETHKGHHGPVRCLRYSPSGDSFATGSEDGTIRIW 320          
BLAST of NO11G01390 vs. NCBI_GenBank
Match: OWZ08264.1 (WD domain-containing hypothetical protein [Phytophthora megakarya])

HSP 1 Score: 336.3 bits (861), Expect = 1.100e-88
Identity = 174/314 (55.41%), Postives = 207/314 (65.92%), Query Frame = 0
Query:   10 RQIPIVCPGHSRPLAGVEYSPVTPDGVFLISACHDKEPMLRNGKTGDWIGTFKGHKGAVWSAKLNKDATFALTGSGDFSAKVWDAITGAELHTFAHKHIVKTVEFSPDSRKFVSGGHEGKLRLFDLV---------EPEAPAVVIDLPP-PSSGGTTS--ITKVIWDRTDSNRVITGTSDGKVRAWDLRSRQEIHSAEVQGTVMDLELSPTVGDILTICAGDKVTFLDA-SSLLPLKSFQMPMHFREEGGASLHPDRQLFIAGGSDLWVRVFDFNTGAELECHKGHHGPVRCLRYAPEGGSYATGSEDGTVRIW 311
            RQIPIVCPGHSRPLA + YS        L+SACHDK PMLR+G TGDWIGTF+GHKGAVWSAKL+ DA FA TGS DFS K+WDA+TG  + T  HKH+VK+V FS D  + ++ GHE  LR+FD++         + E    ++ LPP P +   T+  I KV+          TG  DG V  WDL S  +    +V   VMD+E S   G +LT+ AG +V F D       LKSF MP+ F EEGGASLHP    F+AGGSD WVRVFDF+TG  LE HKGHHGPVRCLRYAP G S+ATGSEDGT+RIW
Sbjct:   14 RQIPIVCPGHSRPLAELHYS----RSGLLVSACHDKLPMLRHGSTGDWIGTFEGHKGAVWSAKLDTDAEFAATGSADFSVKIWDALTGDVVTTLEHKHVVKSVAFSADGARLLTAGHEKLLRVFDVLGVKEQLQSYKAEGRTGIVVLPPSPLAEMQTNQQIRKVV--VLSDKLAATGEVDGTVTVWDLDSYSQTRQFKVDADVMDMEASRD-GQVLTVAAGKQVYFYDVKKDFALLKSFPMPISFTEEGGASLHPTENKFVAGGSDTWVRVFDFDTGELLETHKGHHGPVRCLRYAPSGDSFATGSEDGTIRIW 320          
The following BLAST results are available for this feature:
BLAST of NO11G01390 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM25073.18.000e-12977.54cell division protein [Nannochloropsis gaditana][more]
XP_002295040.15.200e-9655.63WD40-repeat protein [Thalassiosira pseudonana CCMP... [more]
GAX99704.17.500e-9555.77WD domain-containing protein, putative [Pythium in... [more]
CCI45985.11.300e-9456.82unnamed protein product [Albugo candida][more]
XP_002182271.13.700e-9452.35predicted protein [Phaeodactylum tricornutum CCAP ... [more]
GAX27352.14.600e-9251.70serine-threonine kinase receptor-associated protei... [more]
GAX13324.12.500e-9051.42serine-threonine kinase receptor-associated protei... [more]
CBN75289.11.600e-8955.48conserved unknown protein [Ectocarpus siliculosus][more]
POM66263.16.200e-8954.49WD domain containing hypothetical protein [Phytoph... [more]
OWZ08264.11.100e-8855.41WD domain-containing hypothetical protein [Phytoph... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL116nonsL116Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL115nonsL115Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR010ncniR010Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR019ngnoR019Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR018ngnoR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002143NSK002143Nannochloropsis salina (N. salina CCMP1776)gene
NSK002127NSK002127Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO11G01390.1NO11G01390.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|591140gene_5021Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100016g10gene5406Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO11G01390.1NO11G01390.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO11G01390 ID=NO11G01390|Name=NO11G01390|organism=Nannochloropsis oceanica|type=gene|length=1812bp
CAGGTTTCGGTCTTCGACTACCAAGCAAAATCGTACAGGCAACACCAGCG
ACTTCCATCACAGGTGTGGCAAAGCAAGTGGACTGAAGGGGGAGGAGACT
GAAGAAAGGAGCACCAACAGTTGCGGTACCAGCAACAAGAGGAGCAATAA
TCCATGACGGACAACAAGGAAGCGCGGAACCGGCAAATTCCTATAGgtaa
gagctctattggttttagagagagagaagttgaaaggcatttcatccggc
taggggaatggcatccggctcggggatgaaagaccgcggagacctcgtgc
gagatatgagtgaaggccgcttgacaaaaaaagcgttaagtgaggacacc
aggtgcgctttatggtcttcgggagtctgatttgccctttgacccttccc
aatcacttgctttttttaaagTCTGCCCCGGTCACAGCCGGCCTTTGGCA
GGTGTGGAATATAGCCCGGTGACGCCCGACGGGGTCTTCCTCATTAGCGC
TTGTCATGATAAAGAGCCCATGTTGCGAAATGGAAAGACCGGGGATTGGA
TCGGAACTTTTAAGGGGCACAAAGGCGCGGTTTGGAGCGCCAAGTTGAAT
AAGGACGCAACATTTGCCCTGACGGGCTCGGGGGACTTCAGgtgcgtgag
agggagaaggaggaggaaggaagaagggaggtttggaccaggattctacc
ttatttccacatctggcccacgcatatgtatacacgttgcccacccgctc
tccctcctccccccctcgccacctcctcgctacctcccctccagCGCCAA
AGTCTGGGACGCCATCACCGGCGCCGAGCTTCACACTTTCGCGCACAAAC
ACATCGTGAAGACCGTGGAGTTTTCGCCTGACTCCCGGAAATTTGTCTCT
GGTGGACACGAGGGAAAATTGCGTTTGTTCGATTTGGTGGAGCCCGAGGC
GCCGGCTGTGGTGATTGACCTGCCCCCTCCCTCCTCCGGTGGCACCACGT
CAATCACGAAAGTCATTTGGGACCGCACAGATAGCAACAGGGTCATCACA
GGCACGAGTGATGGGAAGGTACGGGCGTGGGATTTGAGGAGCAGGCAGGA
GATCCACTCGGCGGAGGTGCAAGgtgagaaggcggcggagggaagtagga
tggaaagaagatgggaggggggatggctgtcgtcaacaaatgctctgctc
gtgtttcccacacttacgtctttcattctttttcgtcctttcattgacgt
ctacaaaatagGAACCGTGATGGACCTGGAGCTCTCTCCTACAGTTGGCG
ATATTCTTACCATCTGCGCCGGCGACAAGGTGACCTTCCTCGACGCCTCC
TCACTCCTCCCCCTCAAGTCCTTCCAAATGCCCATGCACTTCCGGGAAGA
AGGCGGTGCATCCCTGCATCCCGATCGCCAACTCTTTATTGCTGGAGGAT
CCGATTTGTGGGTGCGGGTCTTCGATTTTAATACCGGCGCGGAGCTTGAG
TGTCATAAAGGCCATCATGGCCCAGTACGATGTCTGCGGTATGCACCTGA
AGGTGGGAGTTACGCGACGGGGAGTGAGGATGGAACGGTTCGTATCTGGG
CGACGCAGGTGGATGCATAGCGATTCTGCGCTTCTGGTGGGGAGGTTGTG
ACCTTCCCACTTCCTCCTTCTCCAAACATTCGTTTCTATGTTGTAAAAGC
ATGGCAAGCATAACAATACATAAAGTGCTGTTCGCTCCAATCTAAGATTA
GGTCGAAAAAGAAATGAGACAATTGCGACGCATTCCAAAAAATAAAACAT
TTTCGACACCAA
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protein sequence of NO11G01390.1

>NO11G01390.1-protein ID=NO11G01390.1-protein|Name=NO11G01390.1|organism=Nannochloropsis oceanica|type=polypeptide|length=317bp
MTDNKEARNRQIPIVCPGHSRPLAGVEYSPVTPDGVFLISACHDKEPMLR
NGKTGDWIGTFKGHKGAVWSAKLNKDATFALTGSGDFSAKVWDAITGAEL
HTFAHKHIVKTVEFSPDSRKFVSGGHEGKLRLFDLVEPEAPAVVIDLPPP
SSGGTTSITKVIWDRTDSNRVITGTSDGKVRAWDLRSRQEIHSAEVQGTV
MDLELSPTVGDILTICAGDKVTFLDASSLLPLKSFQMPMHFREEGGASLH
PDRQLFIAGGSDLWVRVFDFNTGAELECHKGHHGPVRCLRYAPEGGSYAT
GSEDGTVRIWATQVDA*
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Synonyms
Publications