NO11G01320, NO11G01320 (gene) Nannochloropsis oceanica

Overview
NameNO11G01320
Unique NameNO11G01320
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length5974
Alignment locationchr11:455795..461768 +

Link to JBrowse

Properties
Property NameValue
DescriptionRna polymerase i-specific transcription initiation factor rrn3
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr11genomechr11:455795..461768 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007991RNA_pol_I_trans_ini_fac_RRN3
Vocabulary: Biological Process
TermDefinition
GO:0006413translational initiation
Vocabulary: Molecular Function
TermDefinition
GO:0003743translation initiation factor activity
Homology
BLAST of NO11G01320 vs. NCBI_GenBank
Match: EWM25090.1 (rna polymerase i-specific transcription initiation factor rrn3 [Nannochloropsis gaditana])

HSP 1 Score: 494.2 bits (1271), Expect = 9.900e-136
Identity = 325/683 (47.58%), Postives = 378/683 (55.34%), Query Frame = 0
Query:   89 NTIRSRDDMETLPRLFLSLASCITTVTGDPDKFNDLLSALFKYDWSGGSLSRAAFVNLLAHLVSAKSTFLHPTLQMLARSLAAPGPVLPKTQE--QXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLYPALADAFPHRRIEGSGSVVNYARQLLRVSEYTSTLGVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGAPLRDRVLGLIIERCLEIDVEIKIEDSGEARVEEKKAVAESEPTAAIAVHLAHDPSAALVLSEHVYVEDPNFIVYSXXXXXXXXXXXXXXKAQEDPR--XXXXXXXXXXXXXXXKLDCVMLLLFEHLDRVVGREGGEEGRAHAAQLFEGLAPTLEGPILATHRCKYVQFVLFYLAARDPAGRVPSLLVDRLLVRALREENAPVGARQAALAYLSSFLVRSRALSVGGIVRALTVMVEAAETYLARSASDLNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTG----RHVLFYSICQAVFYVVGFHHSTLDGEDILGVGLGSESAAAAVASVECKDGMPLGSFSSSSLAQQLGLKMRLGRLACSPLRPLDHCLESVKREFLRLAHLHAFVPAGALVGLGWGGXXXXXVQATRRNNHNPLDSYFPFDPYLLRRSSRFVATPDVYRYW 764
            N  RS DDMETLP +FL+L++CITT+T +PD F +L SALF+YDWSGG  +R A+  LLAHLVSAKSTF+HP LQMLARSLAAPGP+   T +                                               LYP L  AFPHRR  G G VVNY RQLL ++   +T+                                            G  L D++L LI+ERCLE+DVEIKIEDSGE  V++    AE+       VH AHDPSAALVLSEH+YVEDP + +                   ED    XXXXXXXXX       LD VMLLLF+HLD+ +  +G       A++LFEGL P L+G ILATHRCKYVQF  FYLAARD +GRVP LLVDRLL RA+ E++AP+  R AALAYLSSFLVRSRAL V  IVRALT ++E AE +LAR A+DL +                                             G    R V FYS+CQA+FYVV FHHS+ +GED+LGV       AA   +V       LG            LK RLGRLACSPLRPLDHCLESVKREFLRLA LH  VP GAL GLG G      V      NHNPL+SYFPFDP+LLRRSS FVA P+VYRYW
Sbjct:   34 NHNRSLDDMETLPHVFLALSTCITTITANPDAFKELFSALFQYDWSGGCRARDAYSCLLAHLVSAKSTFVHPVLQMLARSLAAPGPLQDDTAKNGNRMAAEGSGNVQGLIDLGDTNNARKAAVHESLRTVLALVPAGFSELYPVLGQAFPHRRTMGPGGVVNYVRQLLVLATEYATV----------------------TEPAKGTSSGSTPSVQSKQRGSGTALGDKLLALILERCLELDVEIKIEDSGEVSVDQADNAAEA------GVHAAHDPSAALVLSEHMYVEDPTYCL------DIHHPMPGPEVVGEDGAGGXXXXXXXXXVDEMADTLDSVMLLLFQHLDKAISCDG-----QAASRLFEGLGPVLDGSILATHRCKYVQFAFFYLAARDLSGRVPVLLVDRLLARAVEEDDAPMVTRLAALAYLSSFLVRSRALPVEEIVRALTALLETAEAFLARRAADLMVYMDHAWLKEEDPGSWEAGVVKKEERWLGEEEAPYGGKGPTEEDADGQADDRPVFFYSLCQAIFYVVAFHHSSSEGEDVLGV------RAAETGAVR------LGG----------QLKSRLGRLACSPLRPLDHCLESVKREFLRLARLHGLVPWGALGGLGGGEEEEELV---TEGNHNPLNSYFPFDPFLLRRSSGFVARPNVYRYW 652          
BLAST of NO11G01320 vs. NCBI_GenBank
Match: CBJ29597.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 140.2 bits (352), Expect = 3.600e-29
Identity = 226/781 (28.94%), Postives = 312/781 (39.95%), Query Frame = 0
Query:   75 MKLRGNGTNYVHIVNTIRSRDDMETLPRLFLSLASCITTVTGDPDKFNDLLSALFKYDWSGGSLSRAAFVNLLAHLVSAKSTFLHPTLQMLARSLAAPGPVLPKTQEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLYPALADAFPHRRIEGSGSVVNYARQLLRVSEYTSTLGVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGAPL-RDRVLGLIIERCLEIDVEIKIEDSGEARVEEKK--------------AVAESEPTAAIAVHLAHDPSAALVLSEHVYVED---PNFIVYSXXXXXXXXXXXXXXKAQEDPRXXXXXXXXXXXXXXXKLDCVMLLLFEHLDRVVGREGGEEGRAHAAQLFEGLAPTLEGPILATHRCKYVQFVLFYLAARDPAGRVPSLLVDRLLVRALREENAPVGARQAALAYLSSFLVRSRALSVGGIVRALTVMVEAAETYLARSASDLNI------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTGRHVLFYSICQAVFYVVGFHHSTLDGEDILGVGLGSESAAAAVASVECKDGMPLGSFSSSSLAQQLGLKMRLGRLACSPLRPLDHCLESVKREFLRL--AHLHAFVPAGALVGLGWGGXXXXXVQAT------------------------------------RRNNHNPLDSYFPFDPYLLRRSSRFVATPDVYRYW 764
            MK +G+G +Y H+V  + +RDD ETL RL+L L+ C+T ++  PD+F +L+ ALF++DW G      +F  LL HLVSA ST + P + ML R+L     + P+  +                                             L+  L   +PHRR+     + +YA   LRV +Y                                                 APL  + VL LIIE+ LEIDVEIKI D+GEA +++++                A+ +      V    D    ++L    Y++     N  +                +A    +               K             R  G  GG +G    A+L + L    E  IL THR K+VQFVLF+ + R  A  +   LV + LV  L +E+ P   RQ+++AYL+SFL R+  +    +  A+  +++ A  YL + A D ++                                         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    H+LFYS+CQA FYV+ F               G E AA             +  F S ++  Q        RL   PL PL  CL++V+REF RL    + A++    L  L         V  T                                         NPLDS+FPFDPYLLRRS  ++    +Y  W
Sbjct:    1 MKAKGDGHHYQHLVAQLLTRDDPETLWRLYLGLSQCVTIISQQPDEFKELVDALFRFDWRGSDKIVQSFSGLLQHLVSANSTCMVPAMHMLVRNLV----LTPRDLD------------CEGNVDPAALTRQHNVHAALQASLTLVPSGRSKLFGVLKQNYPHRRLRAE-VLSDYALHALRVVQY-------------------------------------------------APLIEESVLRLIIEKGLEIDVEIKIMDTGEAVIDDEEDECDALFTMDDVVDGTADKKKQTTDEVDEMADKLDGVMLVVFNYLDQRLTANASLPPETILGTPVAGDGGCEAAAATQAVLQGDEAGSDSGTLK------------GRGGGSTGGMQGMEPVARLLKSLLLVFEENILPTHRSKFVQFVLFFASGR--ARGLGYALVSK-LVGVLGDESRPKLTRQSSVAYLASFLARASFVDPSLVSTAVQSLLDWAGQYLDQYA-DASVATPVQALGTPSSKGFETPVATRVRARPQSWHGNHPRRSANGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPADHMLFYSVCQATFYVMCFR--------------GDELAA-------------MEGFDSQAVIWQ--------RLLTCPLYPLRRCLDTVRREFARLCCGLMDAYLDRDLLEHLAGISEERSQVSQTITVGSSFSCSTPRSSSSMSMSSNAMWTPSRVTKAGGLGRGSNPLDSFFPFDPYLLRRSHVYI--DQMYNTW 662          
BLAST of NO11G01320 vs. NCBI_GenBank
Match: PNW85726.1 (hypothetical protein CHLRE_03g207950v5 [Chlamydomonas reinhardtii])

HSP 1 Score: 105.5 bits (262), Expect = 9.900e-19
Identity = 139/475 (29.26%), Postives = 186/475 (39.16%), Query Frame = 0
Query:  308 GAPLRDRVLGLIIERCLEIDVEIKIEDSGEARVEE-----------KKAVAESEPTAAIAVHLAHDP------SAALVLSEHVYVEDPNFIVYSXXXXXXXXXXXXXXKAQEDPRXXXXXXXXXXXXXXXKLDCVMLLLFEHLDRVVGREGGEEGRAHAAQLFEGLAPTLEGPILATHRCKYVQFVLFYLAARDPAGRVPSLLVDRLLVRALREENAPVGARQAALAYLSSFLVRSRALSVGGIVRALTVMVEAAETYLARSASDLNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTGRHVLFYSICQAVFYVVGFHHSTLDGEDILGVGLGSESAAAAVASVECKDGMPLGSFSSSSLAQQLGLKMR--LGRLACSPLRPLDHCLESVKREFLRLAHLHAFVPAGALVGLGWGGXXXXXVQATRRNNHNPLDSYFPFDPYLLRRSSRFVATPDVYRYW 764
            GAP+R+ +L  ++E  L +DVEIK ED  +    E            + + E E   A  + +   P      SA L +  H    D      S            XX       XXXXXXXX       KLD +M L FEHL + +    GE       QL++ L    E  IL THR K+ QF++FY    +P+   PS L  RLLV  LR+   P   R A  AYL+SFL R+  L    +V+ L  +    + Y                                                      T RH +FY+  QAV YV+ +H   L G    G   G   +A   A          GS     LA+ +   +R  + ++    L+PL  CL SV  EF+  A     V    L+             ATR  +  PL+ +FPFDPYLLRRSSRF+     Y  W
Sbjct:  205 GAPIREALLTAVVEHLLSLDVEIKWEDIVDVPTGEXXXXXXXXXXXAEDIFELEGMLASELDINAGPEELAQRSAVLAMRRHGPTPD------SRGGWEGALPGSQXXXXXXXXXXXXXXXXXPVDEMANKLDSMMELAFEHLGKRIA--AGE-----LRQLWDTLLSAFERSILNTHRSKFTQFLIFYTCLSNPSHCSPSFL--RLLVSRLRDTRQPPITRAACSAYLASFLARAAFLPESLVVKTLQDLAAFCQDYCNNQG-------------VAAGTGPGPVSRAASTCGLPDTSPFAGLAHEDTASQTQRHQVFYATAQAVLYVLCYHMQPLVGSLHAG---GKTPSADGTAPAH-------GSTERRQLAETVVALVRGPVWQVLNHRLQPLGVCLPSVAAEFVHQATSLGIVDCRPLLS--------QVEPATR--SQRPLEMFFPFDPYLLRRSSRFLQLKVSYVRW 631          
BLAST of NO11G01320 vs. NCBI_GenBank
Match: XP_002897714.1 (RNA polymerase I-specific transcription initiation factor rrn3, putative [Phytophthora infestans T30-4] >EEY64787.1 RNA polymerase I-specific transcription initiation factor rrn3, putative [Phytophthora infestans T30-4])

HSP 1 Score: 102.1 bits (253), Expect = 1.100e-17
Identity = 126/558 (22.58%), Postives = 205/558 (36.74%), Query Frame = 0
Query:   35 GSPSTLRCSAASAATMATVAAALHAPELVPVKSFVSTALAMKLRGNGTNYVHIVNTIR-SRDDMETLPRLFLSLASCITTVTGDPDKFNDLLSALFKYDW--SGGSLSRAAFVNLLAHLVSAKSTFLHPTLQMLARSLAAPGP--------VLPKTQEQ----------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLYPALADAFPHRRIEGSGSVVNYARQLLRVSEYTSTLGVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGAPLRDRVLGLIIERCLEIDVEIKIEDSGEARVEEKKAVAESEPTAAIAVHLAHDPSAALVLSEHVYVEDPNFIVYSXXXXXXXXXXXXXXKAQEDPRXXXXXXXXXXXXXXXKLDCVMLLLFEHL--------------DRVVGREGGEE-GRAHAAQLFEGLAPTLEGPILATHRCKYVQFVLFYLAARDPAGRVPSLLVDRLLVRALREENAPVGARQAALAYLSSFLVRSRALSVGGIVRAL 539
            GS +TLRC+         VA +    E+  +  F+  AL + ++GN  +Y +++  +      + T  ++F +L  CI+T+  +P  +  LL  LFK+D   SG  L    + + + HLVS+ + ++ PTL ML R++  P          VL +T+++                                                                        L+P L + FPH+R++ S  V  Y R +LRV+ Y S                                                 LR+RVLGL++++ + IDVEIK+++S                                   E ++  D +F+                    +D                 KLD +ML++FEH+              D V    G +      AA +F+ L    E  IL THR KY QF+LFY+   DP  +   + + +LL  +L  +  P   RQ+  AYL+SFL R++ +SV  + +AL
Sbjct:    3 GSATTLRCA-------QPVAVSPTEEEVASMHHFIENALDLLIKGNAKSYQYLIQQLTLVPPPVATRRKIFRALPRCISTMAREPKAYRALLDVLFKFDLLASGDPLEVEDYTSFIVHLVSSNTVYVVPTLHMLVRNMRRPQEKELPPDLRVLAQTEQKNEEETTKKSTKAGGISIGGSFGADTVATPTPVAKVVHEAKGPSLDERIQSRFEAAHETLERVLTLVPTAANVLFPILCEHFPHKRMDASTQVA-YLRNVLRVTGYVS------------------------------------------------GLRERVLGLVLDQLVAIDVEIKLDES----------------------------------EEDMFTMD-DFL--------------------DDDMLPPDDASRQVDEMADKLDQMMLVMFEHIEQSAVSSSPTSASSDSVASSTGDKNLDVRQAALIFKYLLKVFEHSILNTHRSKYPQFLLFYVCRMDP--QFQDVFISQLLATSLDPQTPPT-TRQSCGAYLASFLARAKYISVAYLQKAL 446          
BLAST of NO11G01320 vs. NCBI_GenBank
Match: XP_009523651.1 (hypothetical protein PHYSODRAFT_328981 [Phytophthora sojae] >EGZ20934.1 hypothetical protein PHYSODRAFT_328981 [Phytophthora sojae])

HSP 1 Score: 99.8 bits (247), Expect = 5.400e-17
Identity = 129/558 (23.12%), Postives = 199/558 (35.66%), Query Frame = 0
Query:   45 ASAATMATVAAALHAPELVPVKSFVSTALAM-------------KLRGNGTNYVHIVNTIRSRDDMETLPR-LFLSLASCITTVTGDPDKFNDLLSALFKYDW--SGGSLSRAAFVNLLAHLVSAKSTFLHPTLQMLARSL-----------------------------------------AAPGPVLPKTQEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLYPALADAFPHRRIEGSGSVVNYARQLLRVSEYTSTLGVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGAPLRDRVLGLIIERCLEIDVEIKIEDSGEARVEEKKAVAESEPTAAIAVHLAHDPSAALVLSEHVYVEDPNFIVYSXXXXXXXXXXXXXXKAQEDPRXXXXXXXXXXXXXXXKLDCVMLLLFEHL-------DRVVGREGGEEGRAHAAQLFEGLAPTLEGPILATHRCKYVQFVLFYLAARDPAGRVPSLLVDRLLVRALREENAPVGARQAALAYLSSFLVRSRALSVGGIVRAL 539
            A +AT   VAAA    E+  +  F+  AL +              L+GN  +Y +++  +        + R +F +L  CI+T+  +P  +  LL  LFK++   SG  L    + + + HLVS+ + ++ P+L ML R++                                         AAP PV    QEQ                                            L+P L + FPH+R++    V  Y R +LRV+ Y S                                                 LR+RVLGLII++ + IDVEIK+++S                                   E V+  D +F+                    +D                 KLD +ML++FEH+       D        E     AA +F+ L    E  IL THR KY QF+LFY+   DP  +   + + +LL  +L + + P   RQ+  AYL+SFL R++ +SV  + +AL
Sbjct:    2 AGSATSPAVAAAPTEEEVASMHHFIENALDLLIKNAHRLAYRYFLLQGNAKSYQYLITQLTLVPPPVAMRRKIFRALPRCISTMAREPRTYRALLDVLFKFNLLSSGDPLEVEDYTSFIVHLVSSNTVYVVPSLHMLVRNMRRPETKELPPDLRALQEAEKPKAPATSGGGIIIGGSFGATVAAPAPVAEVVQEQ----------PKGPSLEERIQARFEAAHQTLERVLALVPTAANVLFPILCEHFPHKRMDAPTQVA-YLRNVLRVTGYVS------------------------------------------------GLRERVLGLIIDQLVAIDVEIKLDES----------------------------------EEDVFTMD-DFL--------------------DDDMLPPDDSSRQVDEMADKLDQMMLVMFEHIEQCTAAPDAATDASNEETDVRQAALIFKYLLKVFEHSILNTHRSKYPQFLLFYVCRMDP--QFQDIFISQLLTTSL-DPHTPPTTRQSCGAYLASFLARAKYISVAYLQKAL 442          
BLAST of NO11G01320 vs. NCBI_GenBank
Match: OQS06128.1 (RNA polymerase I-specific transcription initiation factor rrn3 [Thraustotheca clavata])

HSP 1 Score: 98.2 bits (243), Expect = 1.600e-16
Identity = 108/485 (22.27%), Postives = 185/485 (38.14%), Query Frame = 0
Query:   61 ELVPVKSFVSTALAMKLRGNGTNYVHIVNTIRSRDDMETLPRLFLSLASCITTVTGDPDKFNDLLSALFKYDWSGGSLSRAAFVNLLAHLVSAKSTFLHPTLQMLARS---LAAPGPVLPKTQEQ-----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLYPALADAFPHRRIEGSGSVVNYARQLLRVSEYTSTLGVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGAPLRDRVLGLIIERCLEIDVEIKIEDSGEARVEEKKAVAESEPTAAIAVHLAHDPSAALVLSEHVYVEDPNFIVYSXXXXXXXXXXXXXXKAQEDPRXXXXXXXXXXXXXXXKLDCVMLLLFEHLDRVVGREGGEEGRAHAAQLFEGLAPTLEGPILATHRCKYVQFVLFYLAARDPAGRVPSLLVDRLLVRALREENAPVGARQAALAYLSSFLVRSRALSV 532
            EL  V   +  AL  KL+GN TNY  I++      D +   +LFL+L   IT +T + D + DL+  +F +D+    +   A++ LL HLV+A++ F+ PT++ML R+   +A P   + K   +                                                       ++  + D FPH+R+E S  +  Y   +L+++ Y                                                   L++RVLGL++E+ + IDVEIK++++ E                              V +   +++D   +                     DP                KLD +ML +F + ++ + R    +G AH A LF  L  + +  +L THR KY QF+LF++A    A     L + +L+  +L  +  PV  R +  +YL+S++ R++ L V
Sbjct:  194 ELASVAGLIENALDFKLKGNATNYSLILSKFEKSTDDKERSQLFLALPRAITKLTMNMDAYRDLIHQIFSFDFMASPVVVDAYIRLLTHLVTAQTAFVQPTIKMLVRNFSRIAPPAQPVAKVVNRMTTMGTQIRAVVSSTPVLSVEEILAQFEAQLQQRYENVHKAFEIVLRLVPASIHMVFECVCDFFPHKRLETSFQLA-YLNNVLKLTTYAK------------------------------------------------GLQERVLGLLVEKLVAIDVEIKLDNTEED-----------------------------VFTMDDFLDDDCCV---------------------DPE------SDMIDENADKLDHLMLAVFTYFEQEIAR----DGNAHIA-LFNYLLKSFDQAVLNTHRSKYPQFLLFFIAKL--AQEHQELFLSQLISVSLDSKFPPV-TRHSCASYLASYVARAKYLPV 565          
BLAST of NO11G01320 vs. NCBI_GenBank
Match: KUF84699.1 (RNA polymerase I-specific transcription initiation factor RRN3 [Phytophthora nicotianae])

HSP 1 Score: 97.1 bits (240), Expect = 3.500e-16
Identity = 171/820 (20.85%), Postives = 278/820 (33.90%), Query Frame = 0
Query:   13 APPRLPALGYNKSGNGNGVAGGGSPSTLRCSAASAATMATVAAALHAPELVPVKSFVSTALAMKLRGNGTNYVHIVNTIR-SRDDMETLPRLFLSLASCITTVTGDPDKFNDLLSALFKYDW--SGGSLSRAAFVNLLAHLVSAKSTFLHPTLQMLARSL-----------------------------------------------AAPGPVLPKTQEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLYPALADAFPHRRIEGSGSVVNYARQLLRVSEYTSTLGVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGAPLRDRVLGLIIERCLEIDVEIKIEDSGEARVEEKKAVAESEPTAAIAVHLAHDPSAALVLSEHVYVEDPNFIVYSXXXXXXXXXXXXXXKAQEDPRXXXXXXXXXXXXXXXKLDCVMLLLFEHL--------------DRVVGREGGEEGRAHAAQLFEGLAPTLEGPILATHRCKYVQFVLFYLAARDPAGRVPSLLVDRLLVRALREENAPVGARQAALAYLSSFLVRSRALSVGGIVRALTVMVEAAETYLARSASDLNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTGRHVLFYSICQAVFYVVGFHHSTLDGEDILGVGLGSE---SAAAAVASVECKDGMPLGSFSSSSLAQQLGLKMRLGRLACSPLRPLDHCLESVKREFLRLAHL--HAFVPAGALVGLGWGGXXXXXVQATRRNNHNPLDSYFPFDPYLLRRSSRFVATPDVYRYW 764
            AP +LPA    +    + +AG         SA +  +   VAA+    E+  +  F+  AL + ++GN  +Y +++  +      + T  ++F +L  CI+T+  +P  +  LL  LFK+D   SG  L    + + + HLVS+ + ++ PTL ML R++                                               AAP PV+   Q+                                             L+P L + FPH+R++    V  Y R +LRV+ Y S                                                 LR+RVLGL++++ + IDVEIK+++S                                   E ++  D +F+                    +D                 KLD +ML++FEH+              D V      +     AA +F+ L    E  IL THR KY QF+LFY+   DP  +   + + +LL  +L  +  P   RQ+  AYL+SFL R++ +SV  + +AL  +++    +L       ++                                              +  +F S  Q V Y+V F    +   D    G G E   S       V      PL     +   + L L      ++   L  +D  + +V     + A     +  P                  +T      PL+++FPFDPYLLRRS R++    +Y YW
Sbjct:  202 APGQLPAQSEQQQIRSSEMAG---------SATTLPSALPVAASPTEEEVASMHHFIENALDLLIKGNAKSYHYLIQQLTLVPPPIATRRKIFRALPRCISTMAREPKAYRALLDVLFKFDLLASGDPLEVEDYTSFIVHLVSSNTVYVVPTLHMLVRNMRRPHEKELPPDLRALAQTEQNKEMEAAKKPAKTGGIAIGGSFGADTVAAPTPVVEPVQQ-----------AKGPSLDERIQARFEAAHQTLERVLTLVPTAANVLFPILCEHFPHKRMDAPTQVA-YLRNVLRVTGYVS------------------------------------------------GLRERVLGLVLDQLVAIDVEIKLDES----------------------------------EEDMFTMD-DFL--------------------DDDMLPPDDASRQVDEMADKLDQMMLVMFEHIEQSAASSSPASVSSDSVAANGDKDVDVRQAAVIFKYLLKVFEHSILNTHRSKYPQFLLFYVCRMDP--QFQDVFISQLLATSLDPQTPPT-TRQSCGAYLASFLARAKYISVAYLQKALYHLLK----WLHDQMDIYDVAHQEQLEREGETAAERDERLLEESEKMHTTGERGF-----------QESIFISSLQTVCYMVCFRGLEIATSD---DGAGYEFLRSLGWERLLVTSSGYCPLAYCQQTVATEFLNLVEAFDLVSEECLERVDQAIGTVSASTTKSAKSMERSKKPTAGSAS-----------ASTLLGQRQPLETFFPFDPYLLRRSFRYIG--PLYLYW 863          
BLAST of NO11G01320 vs. NCBI_GenBank
Match: GAX99604.1 (Hypothetical protein PINS_007411 [Pythium insidiosum])

HSP 1 Score: 97.1 bits (240), Expect = 3.500e-16
Identity = 130/485 (26.80%), Postives = 200/485 (41.24%), Query Frame = 0
Query:   61 ELVPVKSFVSTALAMKLRGNGTNYVHIVNTIRSRDDMETLPR-LFLSLASCITTVTGDPDKFNDLLSALFKYDWSGGSLSRAAFVNLLAHLVSAKSTFLHPTLQMLARSLAAPGPVLPKTQE--QXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLYPALADAFPHRRIEGSGSVVNYARQLLRVSEYTSTLGVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGAPLRDRVLGLIIERCLEIDVEIKIEDSGEARVEEKKAVAESEPTAAIAVHLAHDPSAALVLSEHVYVEDPNFIVYSXXXXXXXXXXXXXXKAQEDPRXXXXXXXXXXXXXXXKLDCVMLLLFEHLDRVV----GREGGEEGRAHAAQLFEGLAPTLEGPILATHRCKYVQFVLFYLAARDPAGRVPSLLVDRLLVRALREENAPVGARQAALAYLSSFLVRSRALSVGGIVRAL 539
            +L  ++ F+  AL + L+GN TNY +++  + S     T  R +FL+L  CI+++  +P  F  LL  LFK+D+        A+ + + HLVS+ + ++ PTLQML R+L  P  + P   E   XXXXXXXXXXXXXXXXX                           + P   DA   +R        +  + L RV +   T                                           +    L++R+ GLII+R + +DVEIK+++  E                   V    D      L + +  +D                      A+ D                 KLD +M+L+FEH++R+V               AA +F+ L    E  IL THR KY QF+LF++   DP  +   + + +LL  +L  +  PV  R +  AYL+SFL R++ + V  + +AL
Sbjct:   41 DLQTLQEFIENALDLLLKGNSTNYQYLIRQLSSGKAHATSRRKIFLALPRCISSMAKEPKAFXQLLDVLFKFDFLVERDEVDAYTSFIVHLVSSNTVYVLPTLQMLVRNLCRPQKLPPHLAEAXXXXXXXXXXXXXXXXXXXGKIKIGGSFGVSVASSFLQTTAAPTAPVAPXDLDAIFQQR------YXDVHKTLQRVLQLVPTAA------------------NALFPRLDAPFQVAYLQNVLTLSLAVPGLQERIFGLIIDRLVAVDVEIKLDEKEE------------------DVFTMDD-----FLDDELLPDD---------------------NAKVD-------------EMADKLDHMMVLMFEHIERLVRDTSSSSSASLNATQAALVFKCLLKVFEHSILNTHRSKYPQFLLFFVCQLDP--QFQDVFISQLLAASLDPQTPPV-TRHSCGAYLASFLARAKYIPVSYLHKAL 441          
BLAST of NO11G01320 vs. NCBI_GenBank
Match: XP_008899287.1 (hypothetical protein PPTG_06982 [Phytophthora parasitica INRA-310] >ETI55460.1 hypothetical protein F443_01885 [Phytophthora parasitica P1569] >ETM54938.1 hypothetical protein L914_01786 [Phytophthora parasitica] >ETN15778.1 hypothetical protein PPTG_06982 [Phytophthora parasitica INRA-310])

HSP 1 Score: 96.7 bits (239), Expect = 4.600e-16
Identity = 164/790 (20.76%), Postives = 267/790 (33.80%), Query Frame = 0
Query:   43 SAASAATMATVAAALHAPELVPVKSFVSTALAMKLRGNGTNYVHIVNTIR-SRDDMETLPRLFLSLASCITTVTGDPDKFNDLLSALFKYDW--SGGSLSRAAFVNLLAHLVSAKSTFLHPTLQMLARSL-----------------------------------------------AAPGPVLPKTQEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLYPALADAFPHRRIEGSGSVVNYARQLLRVSEYTSTLGVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGAPLRDRVLGLIIERCLEIDVEIKIEDSGEARVEEKKAVAESEPTAAIAVHLAHDPSAALVLSEHVYVEDPNFIVYSXXXXXXXXXXXXXXKAQEDPRXXXXXXXXXXXXXXXKLDCVMLLLFEHL--------------DRVVGREGGEEGRAHAAQLFEGLAPTLEGPILATHRCKYVQFVLFYLAARDPAGRVPSLLVDRLLVRALREENAPVGARQAALAYLSSFLVRSRALSVGGIVRALTVMVEAAETYLARSASDLNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTGRHVLFYSICQAVFYVVGFHHSTLDGEDILGVGLGSE---SAAAAVASVECKDGMPLGSFSSSSLAQQLGLKMRLGRLACSPLRPLDHCLESVKREFLRLAHL--HAFVPAGALVGLGWGGXXXXXVQATRRNNHNPLDSYFPFDPYLLRRSSRFVATPDVYRYW 764
            SA +  +   VAA+    E+  +  F+  AL + ++GN  +Y +++  +      + T  ++F +L  CI+T+  +P  +  LL  LFK+D   SG  L    + + + HLVS+ + ++ PTL ML R++                                               AAP PV+   Q+                                             L+P L + FPH+R++    V  Y R +LRV+ Y S                                                 LR+RVLGL++++ + IDVEIK+++S                                   E ++  D +F+                    +D                 KLD +ML++FEH+              D V      +     AA +F+ L    E  IL THR KY QF+LFY+   DP  +   + + +LL  +L  +  P   RQ+  AYL+SFL R++ +SV  + +AL  +++    +L       ++                                              +  +F S  Q V Y+V F    +   D    G G E   S       V      PL     +   + L L      ++   L  +D  + +V     + A     +  P                  +T      PL+++FPFDPYLLRRS R++    +Y YW
Sbjct:    4 SATTLPSALPVAASPTEEEVASMHHFIENALDLLIKGNAKSYHYLIQQLTLVPPPIATRRKIFRALPRCISTMAREPKAYRALLDVLFKFDLLASGDPLEVEDYTSFIVHLVSSNTVYVVPTLHMLVRNMRRPHEKELPPDLRALAQTEQNKEMEAAKKPAKTGGIAIGGSFGADTVAAPTPVVEPVQQ-----------AKGPSLDERIQARFEAAHQTLERVLTLVPTAANVLFPILCEHFPHKRMDAPTQVA-YLRNVLRVTGYVS------------------------------------------------GLRERVLGLVLDQLVAIDVEIKLDES----------------------------------EEDMFTMD-DFL--------------------DDDMLPPDDASRQVDEMADKLDQMMLVMFEHIEQSAASSSPASVSSDSVAANGDKDVDVRQAAVIFKYLLKVFEHSILNTHRSKYPQFLLFYVCRMDP--QFQDVFISQLLATSLDPQTPPT-TRQSCGAYLASFLARAKYISVAYLQKALYHLLK----WLHDQMDIYDVAHQEQLEREGETAAERDERLLEESEKMHTTGERGF-----------QESIFISSLQTVCYMVCFRGLEIATSD---DGAGYEFLRSLGWERLLVTSSGYCPLAYCQQTVATEFLNLVEAFDLVSEECLERVDQAIGTVSASTTKSAKSMERSKKPTAGSAS-----------ASTLLGQRQPLETFFPFDPYLLRRSFRYIG--PLYLYW 644          
BLAST of NO11G01320 vs. NCBI_GenBank
Match: ETK95246.1 (hypothetical protein L915_01809 [Phytophthora parasitica] >ETM01707.1 hypothetical protein L917_01736 [Phytophthora parasitica])

HSP 1 Score: 96.7 bits (239), Expect = 4.600e-16
Identity = 164/790 (20.76%), Postives = 267/790 (33.80%), Query Frame = 0
Query:   43 SAASAATMATVAAALHAPELVPVKSFVSTALAMKLRGNGTNYVHIVNTIR-SRDDMETLPRLFLSLASCITTVTGDPDKFNDLLSALFKYDW--SGGSLSRAAFVNLLAHLVSAKSTFLHPTLQMLARSL-----------------------------------------------AAPGPVLPKTQEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLYPALADAFPHRRIEGSGSVVNYARQLLRVSEYTSTLGVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGAPLRDRVLGLIIERCLEIDVEIKIEDSGEARVEEKKAVAESEPTAAIAVHLAHDPSAALVLSEHVYVEDPNFIVYSXXXXXXXXXXXXXXKAQEDPRXXXXXXXXXXXXXXXKLDCVMLLLFEHL--------------DRVVGREGGEEGRAHAAQLFEGLAPTLEGPILATHRCKYVQFVLFYLAARDPAGRVPSLLVDRLLVRALREENAPVGARQAALAYLSSFLVRSRALSVGGIVRALTVMVEAAETYLARSASDLNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTGRHVLFYSICQAVFYVVGFHHSTLDGEDILGVGLGSE---SAAAAVASVECKDGMPLGSFSSSSLAQQLGLKMRLGRLACSPLRPLDHCLESVKREFLRLAHL--HAFVPAGALVGLGWGGXXXXXVQATRRNNHNPLDSYFPFDPYLLRRSSRFVATPDVYRYW 764
            SA +  +   VAA+    E+  +  F+  AL + ++GN  +Y +++  +      + T  ++F +L  CI+T+  +P  +  LL  LFK+D   SG  L    + + + HLVS+ + ++ PTL ML R++                                               AAP PV+   Q+                                             L+P L + FPH+R++    V  Y R +LRV+ Y S                                                 LR+RVLGL++++ + IDVEIK+++S                                   E ++  D +F+                    +D                 KLD +ML++FEH+              D V      +     AA +F+ L    E  IL THR KY QF+LFY+   DP  +   + + +LL  +L  +  P   RQ+  AYL+SFL R++ +SV  + +AL  +++    +L       ++                                              +  +F S  Q V Y+V F    +   D    G G E   S       V      PL     +   + L L      ++   L  +D  + +V     + A     +  P                  +T      PL+++FPFDPYLLRRS R++    +Y YW
Sbjct:    4 SATTLPSALPVAASPTEEEVASMHHFIENALDLLIKGNAKSYHYLIQQLTLVPPPIATRRKIFRALPRCISTMAREPKAYRALLDVLFKFDLLASGDPLEVEDYASFIVHLVSSNTVYVVPTLHMLVRNMRRPHEKELPPDLRALAQTEQNKEMEAAKKPAKTGGIAIGGSFGADTVAAPTPVVEPVQQ-----------AKGPSLDERIQARFEAAHQTLERVLTLVPTAANVLFPILCEHFPHKRMDAPTQVA-YLRNVLRVTGYVS------------------------------------------------GLRERVLGLVLDQLVAIDVEIKLDES----------------------------------EEDMFTMD-DFL--------------------DDDMLPPDDASRQVDEMADKLDQMMLVMFEHIEQSAASSSPASVSSDSVAANGDKDVDVRQAAVIFKYLLKVFEHSILNTHRSKYPQFLLFYVCRMDP--QFQDVFISQLLATSLDPQTPPT-TRQSCGAYLASFLARAKYISVAYLQKALYHLLK----WLHDQMDIYDVAHQEQLEREGETAAERDERLLEESEKMHTTGERGF-----------QESIFISSLQTVCYMVCFRGLEIATSD---DGAGYEFLRSLGWERLLVTSSGYCPLAYCQQTVATEFLNLVEAFDLVSEECLERVDQAIGTVSASTTKSAKSMERSKKPTAGSAS-----------ASTLLGQRQPLETFFPFDPYLLRRSFRYIG--PLYLYW 644          
The following BLAST results are available for this feature:
BLAST of NO11G01320 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM25090.19.900e-13647.58rna polymerase i-specific transcription initiation... [more]
CBJ29597.13.600e-2928.94conserved unknown protein [Ectocarpus siliculosus][more]
PNW85726.19.900e-1929.26hypothetical protein CHLRE_03g207950v5 [Chlamydomo... [more]
XP_002897714.11.100e-1722.58RNA polymerase I-specific transcription initiation... [more]
XP_009523651.15.400e-1723.12hypothetical protein PHYSODRAFT_328981 [Phytophtho... [more]
OQS06128.11.600e-1622.27RNA polymerase I-specific transcription initiation... [more]
KUF84699.13.500e-1620.85RNA polymerase I-specific transcription initiation... [more]
GAX99604.13.500e-1626.80Hypothetical protein PINS_007411 [Pythium insidios... [more]
XP_008899287.14.600e-1620.76hypothetical protein PPTG_06982 [Phytophthora para... [more]
ETK95246.14.600e-1620.76hypothetical protein L915_01809 [Phytophthora para... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL116nonsL116Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL115nonsL115Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR010ncniR010Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR019ngnoR019Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR018ngnoR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002136NSK002136Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO11G01320.1NO11G01320.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|630719gene_5013Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100016g3gene5413Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO11G01320.1NO11G01320.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO11G01320 ID=NO11G01320|Name=NO11G01320|organism=Nannochloropsis oceanica|type=gene|length=5974bp
TTTACACTTTCTCCTATTTCCATTTTTCAAAACTCAAGCACATCTTTCAA
GTACCATCGCGTAGTAACGACCTACCCATGCCTAATCGCAAGATGACATC
GCATGACCAATGACCAAATAGCCAAAAAAATGCTTTATCTTCAAATGAAC
AAACTTCGCACATTTGCTCGATCTTGCTTCCGCGTGGTACCACGCATTAG
CCAGTCTGGTGATCTTCCGCAGATCCCCTTATTTGTCTTTAAAAACGGTT
GTCTCCCCCAGATATCTTTTTTCGTCTGCTCCATGGCACGGCTATTTCTC
TCTCGTATCAGGGACATTTTTCCATTCTCACTTACCGAGCGCCCGCAATT
TAACAGTCTTCTTTTCTTCTCCAATGTTATCTCTCCCTTCTATCGCCGTG
GACGCTTGGCTGGGGCCTTCCTTCCTCCTTTTCTCGTTTCTTGAACACCA
CCAAGACTGTCTTCCTCGTCTCCTTCATCCAGCTCGCCCACAATATTCAA
TTCCACGTTCATGCCATCATTCCGATGACCAAAGGTCACCTTCTCCTCAT
CGTCACTCTCGTCTTCCTCCTCTTCCTCCTCGTAGTCTTTCTCTTCTTTC
TCGTCATCCTCCTCATTTTCATAGATCCGCTGGACCCTAACTCTATCTTT
CTTCCCGCCCTCAGTCTCTTCGTCATCACTACCACGCTCCCCTATTTCTT
CCTCCTCCTCCTCTCCCTCCTCCTCGTCTAAACTGCCCACATCATCTTCC
ATCGCATCCAATTCATCGTCTGCCGCCGGCAACACCGCCCGCGCTTCCTC
CTCCTCCTCCTCTGCCTTCCCCTTCTTCCCCCTCCTCCCCTGTCTCGAAA
ACAACACCGCCGTCAATCTCTGTTTCAAGTAAAACCTGAACGCCTCCTTC
CGAGGCTTCCGCAAGTCATACACACGTGCCATCCTATCCAATCCCGCCAA
GGCCACAAATGGCAAACTTGGGCTAGAGTGTCGCACCAACCCTCGTATCG
ACCCTGCCGGTCCCTCCATCCTCCCCACCACGGCCATCTTCCCAACATCC
AATCTATACACATTCCCACCCGCATCGCCACTCACCAACTCATTACTACG
AGAGCTGCTGCTCTTCCCGCTACACAATGTCGTGATTCGATACCCCTCTG
GGAGATCCATCATTCGCACGGGCCTTCGATTCGACTCTCTTATGTCATAA
ATTCTCACTTGCTTGTACCCCGTGCCGATGGCCACAATCTTCCCTGCCTT
TCCCTCGTCATCACTATCAATAAAATGTGCGGCGGTGACCCAGACTGGTT
GGCGGAGGCTGAGCTTGTCATGGGGAACATTGCGTGCTTCCCATGTTATT
TCTCCCGTGCTCAAATCGTACAATCCCAGCTCTCGCTCTTTTCCTCCGAC
GGCCACTAGCCCGCTCGAGGGAGATCCTAGGGCCATGCATGTTAAAGGGG
CTTTAAGCTGCCATTCAGCAACTAACACGTCTTTCTCCTGATCTGCTGTC
GATTGAAAGGGGGCGAGGAGCTTGACCTTGCCGTCTTCGTGAGCGACGAC
GAGGAGTTCTTCTGCCTCGGACTGAATGGTCTCCCCTCCTGTCGAAGCCA
TGCCCACTACGTCGGCATTTATTATGCCTTTGCATATCTTGAGTAGGTGA
GGCATCTTTCAAAGCGAAGTAGTGGGTGGTGTATGAGGAAAAGAAGTCTG
GCACATACAATAAAAAGTATCTTCCCATTTTTGCTTTTCCATTATCAATC
CCTCAGGCAACCACTATGCCACATACCTGTACACCATCCTCCCACAAGCT
TATGACACCATCCTGCCGCGCAGCTGCAAATATTGTACCGTTTCGAGCCC
AGCACAGCGCACGAATGGCCCGTGCCCGCTGCTGGCGACCGGCTACGACG
ATGCGTTGGGCTTCCAGGTCGATGGACTTGAGGAGGCCGCCATCGTCGCC
CGTAATGATTCGCATAGCTGAGAAAATACACCAATGGGGGTAAACGGAAA
AGACAAACGGATTTAGTGGACTCTGGTCATTTGTTGATGTGTGAGAGTGT
GGAAGTGGTGGGTACAAGCGGGATAAGGTCGCGTTTTCGTCGACGATCGA
GAAGAAGCGATGGTGGCTGGTGGGCCATGCTTGCCTGTGCCGAGGATGTG
CGCTGTCGCTGACCATGAATTTTAGCTCATGTTTTCAATTGCATACTACA
CCCCATTCTATGATCTTACAGGCAATCTCTTGTCTTTGGTCTTCTGGCGT
TGCCTTTTTCCGGGAGGGCTGCGAGCTCGCATCATCATCAGCAGGAAATC
ACTGTTCGGTGGCCTTGCTTCTTTGTTCGGGAGGGGGTGGAGGCCTGCGC
TACATAGACGCACAAGCACTAAGCGGGCATTCTAGGTAAATATGGCGGGT
TTCAATGTCGCTGCCACAGCGCCGTCAGCACCGCCGCGCCTGCCAGCCCT
GGGCTACAACAAGAGCGGTAATGGGAATGGTGTCGCGGGAGGGGGCAGTC
CTTCTACCCTCAGGTGCTCCGCTGCGTCGGCAGCTACGATGGCTACCGTT
GCGGCGGCTCTGCATGCCCCCGAGTTGGTGCCTGTTAAGTCATTTGTTAG
CACGGCGTTGGCCATGAAGCTGCGGGGTAACGGGACTAACTACGTGCATA
TCGTGAACACCATCAGgtataaaaatagggaaaatgccgggggaaggtgt
ggattatggtgctgttcctttaccgaggtcgtaatagtcgatacgtggat
aattttagccgtcttttacattaaactggtctgtatcttttcattggcag
gcccccttcattttcagaatgcatgtatttcctggatactgctaactaag
cctctctttccttgctccatccactcaaactcaaacacagATCACGCGAC
GACATGGAAACTCTCCCCCGGCTCTTCCTATCCCTCGCCTCATGCATTAC
CACCGTTACGGGCGACCCCGACAAGTTCAATGACCTACTCTCGGCCTTGT
TTAAATACGATTGGAGCGGTGGCAGCCTGTCCCGTGCCGCCTTTGTCAAC
CTCCTCGCTCACCTCGTCTCGGCCAAGAGCACCTTCCTCCACCCGACCCT
TCAGATGCTGGCCCGTAGCTTGGCCGCGCCGGGGCCAGTCTTGCCAAAGA
CGCAAGAGCAGCTGCAGCGGCAACAAGAGCCCCAAGGAGAGGAGAACGAT
GAGAACAACGACGACACCGATGCGGCCCGCAAGGCATCTGTCCACGAAGC
ACTCAGAACCGTCCTGACTCTCGTCCCTGCCGGTGTACCAGAGCTTTATC
CCGCTCTTGCCGATGCCTTTCCTCATCGACGAATCGAAGGGTCAGGGAGT
GTGGTCAATTACGCACGACAGCTCCTTCGAGTATCCGAGTATACATCCAC
CCTTGGCGTGAGCAACAGCAGCAGCAGCTGCTGCAGTAGTAACGGCGGTA
GTGGTGGAGGGCTAGTGCTGAAGAGAAGCAGCAGTAGCAAGGGTAGTAGC
AGTAGCAGAACCGGCGGCACTGGGGGGAGTGTAGGTGGCGCACCATTGCG
CGACAGGGTTCTAGGGCTAATCATCGAGCGGTGTTTGGAAATCGATGTCG
AAATCAAAATCGAAGACTCAGGGGAGGCCAGGGTAGAAGAAAAGAAAGCC
GTCGCAGAATCAGAACCTACTGCAGCCATTGCTGTCCATTTGGCTCATGA
TCCGTCGGCAGCGTTGGTGTTGTCCGAGCACGTCTATGTTGAAGACCCGA
ACTTCATCGTATACTCTCATCATCATGCTGCAGCACTTGCAGCAGCAGCA
GCACCAGTGAAAGCGCAGGAGGACCCAAGAGACAAAGGAGAGGAGGGGGA
GGATGAGGTGGATGAGATGGCGGAGAAACTGGATTGTGTAATGTTGTTGC
TCTTTGAGCATTTGGATCGCGTTGTTGGGAGGGAGGGAGGTGAGGAAGGG
CGTGCACATGCTGCTCAGTTGTTTGAGGGTCTGGCACCGACTTTAGAAGG
CCCAATCTTGGCGACGCACCGATGTAAGTATGTGCAATTTGTCTTGTTTT
ATCTGGCGGCCCGTGACCCTGCCGGGAGGGTGCCCTCTCTTCTTGTTGAC
CGTTTACTGGTCCGGGCGTTACGAGAGGAGAACGCGCCCGTTGGGGCACG
CCAGGCGGCATTAGCTTATTTATCTTCATTTTTGGTGAGGAGTAGAGCTT
TGTCGGTTGGGGGGATCGTGAGGGCGTTGACGGTGATGGTAGAAGCGGCT
GAGACGTACCTGGCTAGAAGTGCCTCCGATTTGAACATTATGATGCTGCT
GGCGAAGCATGAGGAGGAGGAGGAAGGGGAGGAGGAGTATGGTTGGGGAG
CGGTAAAAAAGGAGGAAGGAGGGTGCGGGCTAGCGGGAGAGGAGGAGGAA
GAGGATGGGGAGGAAGAGGGAACCGGAAGACATGTTTTGTTTTATTCAAT
TTGTCAGGCGGTTTTTTATGTGGTGGGTTTTCATCACTCTACACTAGATG
GGGAGGACATCTTAGGCGTCGGCCTTGGATCAGAATCAGCAGCGGCTGCT
GTAGCATCCGTCGAATGTAAGGATGGCATGCCTCTTGGTTCTTTTTCCTC
ATCTTCCTTGGCGCAGCAGTTGGGGTTGAAGATGAGGCTGGGTCGATTGG
CTTGCTCGCCTTTACGGCCTTTGGACCATTGCTTAGAGAGTGTCAAACGT
GAATTTCTGCGCTTGGCCCATTTACATGCCTTTGTTCCTGCGGGAGCGTT
GGTGGGGCTTGGTTGGGGGGGAGGGGGGGAGGAAGAGGTGCAGGCCACAA
GGCGGAATAACCATAACCCGCTTGACTCGTATTTTCCATTTGACCCGTAC
TTGCTGAGGAGGTCGTCGCGGTTTGTGGCCACACCGGATGTCTATAGGTA
CTGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTTGCAGCGCTTGAGTA
CTGTGAAGAAGGAAGAGGGGGAAGGAGAGGGGGAGGAACAGTGGGAGGGA
CGGTCGGTTACGTCGGAGGACGGGCATAGCAGTGGAAGTAGTGTTTGTGG
CAGCGAGGACGTAGACGAAGACGAGGACGAGGACGACTCCAGTAGCAGCA
GCAGCAACAGTAGCATCAGCAGCAGGGGTTCGGACGAAGAGGTAGAGAAT
GATGATCAGGAGAGAGGGGAGGAGGAGGAGGACATGGAAGCGGAGGAGGA
GGACATGGAAGCGGAGGAGGAGGACATGGAAGCGGAGGAGGAGGATGATG
TGATGTCTATGAGCGTGGCCTCGACGGGAAATGGTCTTGTTTTAGCAAAG
ACTGCCGCGTATTGGCGGGAACAGCAGACATATGCATACACAGACGAGAA
CCAAAGGGACCGGAGGAGGAAAGCGAGGAAGAAAGAGAAAACGAAGACGA
AGGAGAAGAAAGAGAAGGATTCGCAGGGTGGGAAGGGTGGGGGGAAGAAT
GGATTGCATTCTCGGAAGCGGGAGCGGGTAGACTCGATGGATTATGACCA
GGATGGGTTCGGTGAAGAGGAGGGTGAGGAGGAGGAGGAGGGGGAAGTGG
ACGGGGAGGACGGGACGGACGATGAGGAGGGGGAGAGGGCACCAGCTGCA
GCTCCAGCAGCGATGGCGAGGACGGGCTTGCTGCTGAGCGATCATGTAGT
TGAGGCTGCGGCTGTAGCAGCGGCGGCGCAAGCCCGTGTGCGCAAGGAAA
GTGTCAGCTCGGTGGGTAGTTGGTAATGTATGGGAGTCGGATGGAAAAGC
GTCGATCACGACGCTTGAAAATGAGGTGCCAGAGAGAGAGAGAGAGAATG
AGAGAGAGAGAATGAGAGTTAGAGAGAGAAAGAGAGAGATGTGCAAAACA
ATTTTGTAAACGCGGTGCGGGAATTGAAATTTGCAGCCGGTATGCCGCGG
AGGGAGGATTTCCCTTTTCTAATACCCTGATCGATATTAGTGACTGTATA
AAAGAATAAAGGCCCATCTGCATC
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protein sequence of NO11G01320.1

>NO11G01320.1-protein ID=NO11G01320.1-protein|Name=NO11G01320.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1037bp
MAGFNVAATAPSAPPRLPALGYNKSGNGNGVAGGGSPSTLRCSAASAATM
ATVAAALHAPELVPVKSFVSTALAMKLRGNGTNYVHIVNTIRSRDDMETL
PRLFLSLASCITTVTGDPDKFNDLLSALFKYDWSGGSLSRAAFVNLLAHL
VSAKSTFLHPTLQMLARSLAAPGPVLPKTQEQLQRQQEPQGEENDENNDD
TDAARKASVHEALRTVLTLVPAGVPELYPALADAFPHRRIEGSGSVVNYA
RQLLRVSEYTSTLGVSNSSSSCCSSNGGSGGGLVLKRSSSSKGSSSSRTG
GTGGSVGGAPLRDRVLGLIIERCLEIDVEIKIEDSGEARVEEKKAVAESE
PTAAIAVHLAHDPSAALVLSEHVYVEDPNFIVYSHHHAAALAAAAAPVKA
QEDPRDKGEEGEDEVDEMAEKLDCVMLLLFEHLDRVVGREGGEEGRAHAA
QLFEGLAPTLEGPILATHRCKYVQFVLFYLAARDPAGRVPSLLVDRLLVR
ALREENAPVGARQAALAYLSSFLVRSRALSVGGIVRALTVMVEAAETYLA
RSASDLNIMMLLAKHEEEEEGEEEYGWGAVKKEEGGCGLAGEEEEEDGEE
EGTGRHVLFYSICQAVFYVVGFHHSTLDGEDILGVGLGSESAAAAVASVE
CKDGMPLGSFSSSSLAQQLGLKMRLGRLACSPLRPLDHCLESVKREFLRL
AHLHAFVPAGALVGLGWGGGGEEEVQATRRNNHNPLDSYFPFDPYLLRRS
SRFVATPDVYRYWQQQQQQQQQQLQRLSTVKKEEGEGEGEEQWEGRSVTS
EDGHSSGSSVCGSEDVDEDEDEDDSSSSSSNSSISSRGSDEEVENDDQER
GEEEEDMEAEEEDMEAEEEDMEAEEEDDVMSMSVASTGNGLVLAKTAAYW
REQQTYAYTDENQRDRRRKARKKEKTKTKEKKEKDSQGGKGGGKNGLHSR
KRERVDSMDYDQDGFGEEEGEEEEEGEVDGEDGTDDEEGERAPAAAPAAM
ARTGLLLSDHVVEAAAVAAAAQARVRKESVSSVGSW*
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Synonyms
Publications