NO11G01250, NO11G01250 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO11G01250 vs. NCBI_GenBank
Match: CBJ26257.1 (thiamine-phosphate pyrophosphorylase [Ectocarpus siliculosus]) HSP 1 Score: 98.2 bits (243), Expect = 4.700e-17 Identity = 74/225 (32.89%), Postives = 104/225 (46.22%), Query Frame = 0 Query: 51 PYLVYVTP--AIPAGAEEQKAWFEKVQQCAQAGVPLVQIRDKVLSAEALAPHVTRCREQLDAAAAHYWQPQQQHTHPKTLLIINGHPE--MHIGLDGVHFPEDSLERVSMVLFREXXXXXXXXXXXXXXXXXXXAFVTGVSVHSVEAAVKAAQMGVDYLQVGTMYLTGSHPEKLEVEGTALMTAIDTALREAQLRDRVLICGIGGITPANCEAVLRAGADGVAVI 272 P L +TP + E + +Q+ GV LVQ+RD A++ A R ++ A L ++NG P+ G DGVH PE ++R+ + G SVHSV AAV+AA++G DY+QVGTM+ T SHP K EG ++ + L+ L D VL+ G+GGI +NC V+ AG DGVA I Sbjct: 49 PVLELITPDGCASSSFSETSSLVINIQKAVAGGVSLVQLRDYKSGAKSKADLAVRISTAIEGRA---------------LFVVNGEPDAARASGADGVHLPERMMDRL-----------------VGLRGQGEWPRIVGCSVHSVAAAVEAARLGADYVQVGTMFATQSHPGKTP-EGVGMLNDVRRQLQVEGL-DVVLVLGVGGIDASNCGDVVAAGGDGVAAI 239
BLAST of NO11G01250 vs. NCBI_GenBank
Match: KPK48294.1 (hypothetical protein AMJ77_00455 [Dehalococcoidia bacterium SM23_28_2]) HSP 1 Score: 91.3 bits (225), Expect = 5.700e-15 Identity = 74/217 (34.10%), Postives = 98/217 (45.16%), Query Frame = 0 Query: 72 EKVQQCAQAGVPLVQIRDKVLSAEALAPHVTRCREQLDAAAAHYWQPQQQHTHPKTLLIINGHPEMHI--GLDGVHFPEDSLERVSMVLFREXXXXXXXXXXXXXXXXXXXAFVTGVSVHSVEAAVKAAQMGVDYLQVGTMYLTGSHPEKLEVEGTALMTAIDTALREAQLRDRVLICGIGGITPANCEAVLRAGADGVAVISGIAAVDNDVPRTVA 287 E V Q GV +VQ+R+K L+A L P R R T K LLI+N H ++ + DGVH PE +M F+ G SVHS E AV+A + G DY+QVG ++ T SH L G AL+ ++ L + I +GGIT N E V+RAGA+G AVIS I +D+ P A Sbjct: 24 EAVAQAVDGGVNVVQLREKDLTAAQLIPLADRLR---------------AITEDKALLIVNTHLDVALVCAADGVHLPERGPSVAAM------------------RRLAGDGFIIGRSVHSAEEAVRAEEEGADYVQVGAIFPTRSH-RGLPAAGLALLKSVAAML-------AIPIVAVGGITAGNVEQVMRAGAEGAAVISAI--LDSSSPGAAA 197
BLAST of NO11G01250 vs. NCBI_GenBank
Match: XP_009821548.1 (thiamine-phosphate pyrophosphorylase [Aphanomyces astaci] >ETV89148.1 thiamine-phosphate pyrophosphorylase [Aphanomyces astaci]) HSP 1 Score: 90.9 bits (224), Expect = 7.500e-15 Identity = 59/115 (51.30%), Postives = 73/115 (63.48%), Query Frame = 0 Query: 185 GVSVHSVEAAVKAAQMGVDYLQVGTMYLTGSHPEKLEVEGTALMTAIDTALREAQLRDRVLICGIGGITPANCEAVLRAGADGVAVISGIAAVDNDVPRTVAAFREVFARLDTAS 300 GVSVH++ +AV AA + YLQVGTM+ T SHPEK VEG LM A+ AL +L GIGGIT +NC V+RAGA+G+AVI I +D D P +AA R + LD AS Sbjct: 118 GVSVHAISSAVTAAALESSYLQVGTMFPTASHPEKTSVEGPELMRAVRQALPSTRL------IGIGGITESNCVDVMRAGANGIAVIRAI--LDADKP-DIAATR-LRQALDNAS 222
BLAST of NO11G01250 vs. NCBI_GenBank
Match: XP_008862568.1 (thiamine-phosphate pyrophosphorylase [Aphanomyces invadans] >ETW08763.1 thiamine-phosphate pyrophosphorylase [Aphanomyces invadans]) HSP 1 Score: 90.1 bits (222), Expect = 1.300e-14 Identity = 67/170 (39.41%), Postives = 85/170 (50.00%), Query Frame = 0 Query: 120 QQHTHPKTLLIIN---GHPEMHIGLDGVHFPEDSLERVSMVLFREXXXXXXXXXXXXXXXXXXXAFVTGVSVHSVEAAVKAAQMGVDYLQVGTMYLTGSHPEKLEVEGTALMTAIDTALREAQLRDRVLICGIGGITPANCEAVLRAGADGVAVISGIAAVDNDVPRTVA 287 +Q T P L ++N G P+ LDG H+PE L + +L + GVSVH+ +A AA +G Y+QVGTM+ T SHPEK VEG L+ + AL A L G+GGIT ANC VL+AGA GVAVI I +D D P A Sbjct: 67 EQLTKP-PLYVVNTPIGLPDSTPRLDGWHYPERCLSTLEGMLEQHGRGFF------------------GVSVHAAASAETAAALGASYIQVGTMFPTASHPEKTCVEGPELIRQVRQALPSATL------IGVGGITDANCVDVLQAGASGVAVIRAI--LDADKPDVAA 209
BLAST of NO11G01250 vs. NCBI_GenBank
Match: WP_024327492.1 (thiamine phosphate synthase [Thioalkalivibrio sp. AKL19]) HSP 1 Score: 83.2 bits (204), Expect = 1.600e-12 Identity = 78/247 (31.58%), Postives = 108/247 (43.72%), Query Frame = 0 Query: 53 LVYVTPAIPAGAEEQKAWFEKVQQCAQAGVPLVQIRDKVLSAEALAPHVTRCREQLDAAAAHYWQPQQQHTHPKTLLIINGHPEM--HIGLDGVHFPEDSLERVSMVLFREXXXXXXXXXXXXXXXXXXXAFVTGVSVHSVEAAVKAA-QMGVDYLQVGTMYLTGSHPEKLEVEGTALMTAIDTALREAQLRDRVLICGIGGITPANCEAVLRAGADGVAVISGIAAVDNDVPRTVAAFREVFARLD 297 L +VTPA+P GA+ + E + + G L+Q RDKVL+ +A RE + A AH L IIN E+ +G DGVH D + V+ V GVS ++ A +AA + G +Y+ GTM+ + + PE A +R A+ + ICGIGGIT N V+ AGAD VAVI GI+A P AA R++ D Sbjct: 12 LYFVTPAVPEGADPRTTHLENSRAALRGGARLIQFRDKVLANDA---REAIARELVALAHAH-----------GALCIINDDTELAARVGADGVHLGRDDPDPVA------------------ARARLGPGAVVGVSCYNELARAEAATRTGANYVAFGTMFASPTKPE--------AAYAGPELIRRARAALDLPICGIGGITADNAAEVVTAGADLVAVIQGISA----APDPEAAARQISELFD 214
BLAST of NO11G01250 vs. NCBI_GenBank
Match: OGO48492.1 (hypothetical protein A2W34_04135 [Chloroflexi bacterium RBG_16_64_32]) HSP 1 Score: 83.2 bits (204), Expect = 1.600e-12 Identity = 73/233 (31.33%), Postives = 100/233 (42.92%), Query Frame = 0 Query: 46 LSVPTPYLVYVTPAIPAGAEEQKAWFEKVQQCAQAGVPLVQIRDKVLSAEALAPHVTRCREQLDAAAAHYWQPQQQHTHPKTLLIINGHPEM--HIGLDGVHFPEDSLERVSMVLFREXXXXXXXXXXXXXXXXXXXAFVTGVSVHSVEAAVKAAQMGVDYLQVGTMYLTGSHPEKLEVEGTALMTAIDTALREAQLRDRVLICGIGGITPANCEAVLRAGADGVAVISGIAA 277 + +P P L+ VT G + A + V+ + G VQ+R+K L A L+ R RE A LL++NG E+ G DGVH PED+ F+ G S+HS AA +A G DYL G +Y T SHP + E G AL+ + + R+ + IGG+T E V+RAGA GVAVIS + A Sbjct: 1 MPLPRPCLMLVTDRSLCGGADGLA--DAVEAAVEGGADAVQLREKSLPASELSTLARRLREVTRGA----------------LLVVNGPLEVATEAGADGVHLPEDA----------------------PPVRRPRQGFLVGRSIHSPVAARRAEAEGADYLVAGPVYETRSHPGR-EPAGLALIEQVTQIV-------RIPVLAIGGVTAGRVEEVVRAGASGVAVISAVLA 185
BLAST of NO11G01250 vs. NCBI_GenBank
Match: GBD11024.1 (Thiazole tautomerase [bacterium HR23]) HSP 1 Score: 82.8 bits (203), Expect = 2.000e-12 Identity = 80/265 (30.19%), Postives = 110/265 (41.51%), Query Frame = 0 Query: 46 LSVPTPYLVYVTP--AIPAGAEEQKAWFEKVQQCAQAGVPLVQIRDKVLSAEALAPHVTRCREQLDAAAAHYWQPQQQHTHPKTLLIINGHPEMHI--GLDGVHFPEDSLERVSMVLFREXXXXXXXXXXXXXXXXXXXAFVTGVSVHSVEAAVKAAQMGVDYLQVGTMYLTGSHPEKLEVEGTALMTAIDTALREAQLRDRVLICGIGGITPANCEAVLRAGADGVAVISGIAAVDNDVPRTVAAFREVFARLDTASKNRGDAC 307 + +P P L VT P+ Q A E V Q + GV LVQ+R+K L L R RE T + LL IN ++ + DGVH PE L ++ + G SVHSVEA +A Q G D L GT++ + SHP + G L+TA+ A+ + + IGG+TP N +RAGA GVAV++ I PR A+ R + + A G C Sbjct: 1 MPIPLPCLALVTDRHLYPS----QDALVEAVAQAVEGGVDLVQVREKDLPGGHLLALAVRLREV---------------TRGRALLFINERADVALLSEADGVHLPEAGLPPSAV------------------RRLAGRRLLIGASVHSVEAGYRAEQEGADLLVAGTIFPSRSHPGQ-SATGVGLLTALRKAV-------SLPVLAIGGVTPQNAGECIRAGAHGVAVVTAILG----QPRPAASARRLREAMRQAWAGGGALC 216
BLAST of NO11G01250 vs. NCBI_GenBank
Match: XP_008608177.1 (hypothetical protein SDRG_04288 [Saprolegnia diclina VS20] >EQC38585.1 hypothetical protein SDRG_04288 [Saprolegnia diclina VS20]) HSP 1 Score: 82.4 bits (202), Expect = 2.700e-12 Identity = 57/122 (46.72%), Postives = 67/122 (54.92%), Query Frame = 0 Query: 183 VTGVSVHSVEAAVKAAQMGVDYLQVGTMYLTGSHPEKLEVEGTALMTAIDTALREAQLRDRVLICGIGGITPANCEAVLRAGADGVAVISGIAAVDNDVPRTVAAFREVFARLDTASKNRGD 305 + G SVHSV +A +A ++G YLQVGTM+ T SHPEK VEG AL+ I V + GIGGI NC VL AGA GV+VI I A P TVA + LDT RGD Sbjct: 117 IYGFSVHSVPSARRAIKLGASYLQVGTMFPTASHPEKKVVEGPALIHEIHKRF------PNVPLIGIGGIDETNCAEVLAAGASGVSVIRAILAAKG--PSTVA--EHLRRELDT---RRGD 225
BLAST of NO11G01250 vs. NCBI_GenBank
Match: WP_028491377.1 (thiamine phosphate synthase [Thioalkalivibrio sp. ALE19]) HSP 1 Score: 79.0 bits (193), Expect = 2.900e-11 Identity = 83/261 (31.80%), Postives = 107/261 (41.00%), Query Frame = 0 Query: 41 TTPPKLSVPTPYLVYVTPAIPAGAEEQKAWFEKVQQCAQAGVPLVQIRDKVLSAEALAPHVTRCREQLDAAAAHYWQPQQQHTHPKTLLIINGHPEM--HIGLDGVHFPEDSLERVSMVLFREXXXXXXXXXXXXXXXXXXXAFVTGVSVHSVEAAVKAAQ-MGVDYLQVGTMYLTGSHPEKLEVEGTALMTAIDTALREAQLRDRVLICGIGGITPANCEAVLRAGADGVAVISGIAAVDNDVPRTVAAFREVFARLDTA 299 T P P L +VTPA P GA+ A + G VQ+RDK L EA +E + A A H H I+N E+ IG DGVH D + A V GVS ++ A +AAQ G DY+ G+M+ + + PE + A +R+A+ V IC IGGIT N V+ AGAD VAVI GI+A P AA R + A TA Sbjct: 2 TEPVTERAPLRGLYFVTPAPPPGADPLPAHTDAAAAALAGGACCVQLRDKYLEGEA--------QETVARALARLC-----HDH-GAYFIVNDDVELAARIGADGVHLGRDDPDPAG------------------ARARLGDAAVIGVSCYNELARARAAQAAGADYVAFGSMFPSPTKPEAVR--------ATPELIRQARRELAVAICAIGGITADNAAQVVAAGADMVAVIQGISA----APDPEAAARRIAALFRTA 218
BLAST of NO11G01250 vs. NCBI_GenBank
Match: XP_005539074.1 (similar to thiamine phosphate pyrophosphorylase [Cyanidioschyzon merolae strain 10D] >BAM83038.1 similar to thiamine phosphate pyrophosphorylase [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 78.6 bits (192), Expect = 3.800e-11 Identity = 51/99 (51.52%), Postives = 58/99 (58.59%), Query Frame = 0 Query: 183 VTGVSVHSVEAAVKAAQMG-VDYLQVGTMYLTGSHPEKLE---VEGTALMTAIDTALREAQLRDRVLICGIGGITPANCEAVLRAGADGVAVISGIAAV 278 V G SVHSV A+ AA+ G V YL VGTM+ T SHPEK +EG LM A+ AL + L + GIGGITP N VL AGA GVA I I V Sbjct: 131 VLGTSVHSVSEALFAAETGLVSYLLVGTMFATASHPEKSSPEFIEGIPLMRAVSQALSTSSLH----LYGIGGITPGNINQVLEAGAHGVATIRSIVPV 225 The following BLAST results are available for this feature:
BLAST of NO11G01250 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO11G01250 ID=NO11G01250|Name=NO11G01250|organism=Nannochloropsis oceanica|type=gene|length=1277bpback to top protein sequence of NO11G01250.1 >NO11G01250.1-protein ID=NO11G01250.1-protein|Name=NO11G01250.1|organism=Nannochloropsis oceanica|type=polypeptide|length=308bpback to top Synonyms
Publications
|