NO11G01100, NO11G01100 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO11G01100 vs. NCBI_GenBank
Match: CEL93488.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 151.0 bits (380), Expect = 5.700e-33 Identity = 89/210 (42.38%), Postives = 128/210 (60.95%), Query Frame = 0 Query: 80 PAQAAGLAKINNELAGYGLPPIL--DVPGGFSPLVEVYGKAA--GARKERDTLLVQFLYPSLWVVSKPSIDKNGEEGTISAGDYQKGDSAAFFV--GDGPESGKIDQQSNEYFGEVVTRAIGQKSANVYQNFKVLKKRPGAKGSNGAQYTIVEFKYELLTGAGFTVDRKGVASVTQVGKNIQALWIATTATRWKKIGDDCITMADSFRVY 284 PA A K N L GLPP+ DVP GF+ LV+V ++ G +ERD ++VQF+YPS W+V +P +DKNG+ GTI+AG+ QK ++AA FV D GK+ Q ++ +V R I QK K+L K A+ S+ +Y +V ++YEL TGAGFTV R+GV +VT K+++ L+ ATT +++K+G + DSFR Y Sbjct: 88 PASAEPFDKQNKLLKVAGLPPVKPDDVPKGFNLLVDVLDQSEIYGRVRERDPVIVQFVYPSSWLVVRPVVDKNGQSGTITAGN-QKTETAALFVVPNDTGAKGKLKDQPMSFWEGLVGRWISQK-GETSSGLKILSKY-AAEASSSDEYMVVNYRYELATGAGFTVYRRGVGAVTTTDKSVECLFTATTEEKFRKVGPTLQKIVDSFRCY 294
BLAST of NO11G01100 vs. NCBI_GenBank
Match: XP_005827071.1 (hypothetical protein GUITHDRAFT_113828 [Guillardia theta CCMP2712] >EKX40091.1 hypothetical protein GUITHDRAFT_113828 [Guillardia theta CCMP2712]) HSP 1 Score: 135.6 bits (340), Expect = 2.500e-28 Identity = 86/229 (37.55%), Postives = 124/229 (54.15%), Query Frame = 0 Query: 81 AQAAGLA--------KINNELAGYGLPPILDVPGGFSPLVEVYGKAAGAR------------------KERDTLLVQFLYPSLWVVSKPSIDKNGEEGTISAGDYQKGDSAAFFVGDGPESGKIDQQSNEYFGEVVTRAIGQKSANVYQNFKVLKKRPGAKGSNGAQYTIVEFKYELLTGAGFTVDRKGVASVTQVGKNIQALWIATTATRWKKIGDDCITMADSFRVY 284 A AAGLA +N +L YGL + VPGGF PL++ G + A K + +LV F YP W+VS P NGE GT+SAG+Y KGDSAA ESGKI +Q E+F +++T+ + S N +Q FKV+KK+ ++ +G + +E++Y+L+T +G V R G A + +G + AL + TR+K + DD T DSFRV+ Sbjct: 72 ADAAGLAFGYSENLKDMNTQLEAYGLSKVASVPGGFKPLMQTIGGSVAANIDGSKIMDSIGSKVSVGLKSGERVLVLFNYPGSWIVSLPISTTNGESGTVSAGNYVKGDSAA-VSATILESGKIVEQGTEFFEKLLTQTV---SNNGWQGFKVIKKK-ASEPIDGNEAVDIEYRYDLIT-SGPVVGRHGFAKLVGLGTTVVALGATSADTRFKNLKDDLKTTTDSFRVH 294
BLAST of NO11G01100 vs. NCBI_GenBank
Match: KOO31222.1 (hypothetical protein Ctob_006538 [Chrysochromulina sp. CCMP291]) HSP 1 Score: 131.0 bits (328), Expect = 6.100e-27 Identity = 88/237 (37.13%), Postives = 120/237 (50.63%), Query Frame = 0 Query: 56 QVAGVGLAVNMAPLLMDGKVGFVQPAQAAGLAKINNELAGYGLPPILDVPGGFSPLVE---------VYGKAAGARKERDTLLVQFLYPSLWVVSKPSIDKNGEEGTISAGDYQKGDSAAFFVGDGPESGKIDQQSNEYFGEVVTRAIGQKSANVYQNFKVLKKRPGAKGSNGAQYTIVEFKYELLTGAGFTVDRKGVASVTQVGKNIQALWIATTATRWKKIGDDCITMADSFRVY 284 Q A +A +APL V V + N L G P + V GGFSPLV+ + G A R + LLV+FLYPS W+V PS+ +NGE G I A +Y KGDSA F P K+ S +F ++ Q + +V+++ KV KK +G + I+ F Y LLT AGFTV R+GVAS T + + ATTA R+K++ +T+ DSFR Y Sbjct: 33 QAAAALVATALAPLAAHADVRGVNENRPTNEKDCNALLTRLGYAP-MKVSGGFSPLVQFIGFDKPANIDGFKAKERAFQSPLLVRFLYPSGWLVESPSVTENGEAGNIGANNYIKGDSATFAAAPLPSGEKLTTLSKPFFQSWLS---SQMTKDVFEDVKV-KKISTVTQPDGTEMLIISFGYTLLTRAGFTVLRQGVASATITDNAVVGIVTATTALRYKELESQLMTICDSFRAY 264
BLAST of NO11G01100 vs. NCBI_GenBank
Match: XP_005788828.1 (hypothetical protein EMIHUDRAFT_423306 [Emiliania huxleyi CCMP1516] >EOD36399.1 hypothetical protein EMIHUDRAFT_423306 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 125.6 bits (314), Expect = 2.600e-25 Identity = 98/264 (37.12%), Postives = 131/264 (49.62%), Query Frame = 0 Query: 32 STKQYAETTPGDS-SRLGFLQRVVGQVA-GVGLAVNMAPLLMDG-KVGFVQPAQAAGLAKINNELAGYGLPPILDVPGGFSPLVEVYGKAAGA------RKER---DTLLVQFLYPSLWVVSKPSIDKNGEEGTISAGDYQKGDSAAFFVGDGPESGKIDQQSNEYFGEVVTRAIGQKSANVYQNFKVLKKRPGAKGSNGAQYTIVEFKYELLTGAGFTVDRKGVASVTQVGKNIQALWIATTATRWKKIGDDCITMADSFRVY 284 S+ + PG+ SR G L R A L+ A + DG V V G + L G PP+ V G SPLV+ G A A +KER TLLV+FLYPS W+V P++ +NGE G I+A +Y KGD A F P GK + ++ F + T + Q +A+VY++ KV K + ++G ++F Y LLT AGFTVDRKG A V VG I L TT R+K + D +SFR Y Sbjct: 19 SSIKLGRAAPGEGLSRRGLLARSAALAALPAPLSALAAGVASDGTTVRGVNEGMPTGEKDVAKFLQQQGFPPLPKV-NGLSPLVQYIGAAPPANIDGSKQKERAFDSTLLVKFLYPSGWLVETPTLTENGEAGKIAANNYLKGDFADFVAAKLP-PGKTLESIDKAF--LTTFLVSQMTADVYEDVKVGKVK-RLTAADGMDVAYIDFGYTLLTRAGFTVDRKGTACVHVVGGAIVGLVTGTTGQRFKSLEADLRACTESFRAY 277
BLAST of NO11G01100 vs. NCBI_GenBank
Match: XP_005778537.1 (hypothetical protein EMIHUDRAFT_443487 [Emiliania huxleyi CCMP1516] >EOD26108.1 hypothetical protein EMIHUDRAFT_443487 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 124.0 bits (310), Expect = 7.500e-25 Identity = 97/264 (36.74%), Postives = 130/264 (49.24%), Query Frame = 0 Query: 32 STKQYAETTPGDS-SRLGFLQRVVGQVA-GVGLAVNMAPLLMDG-KVGFVQPAQAAGLAKINNELAGYGLPPILDVPGGFSPLVEVYGKAAGA------RKER---DTLLVQFLYPSLWVVSKPSIDKNGEEGTISAGDYQKGDSAAFFVGDGPESGKIDQQSNEYFGEVVTRAIGQKSANVYQNFKVLKKRPGAKGSNGAQYTIVEFKYELLTGAGFTVDRKGVASVTQVGKNIQALWIATTATRWKKIGDDCITMADSFRVY 284 S+ + PG+ SR G L R A L+ A + DG V V G + L G PP+ V G SPLV+ G A A +KER TLLV+FLYPS W+V P++ +NGE G I+A +Y KGD A F P GK + ++ F + T + Q + +VY++ KV K + ++G ++F Y LLT AGFTVDRKG A V VG I L TT R+K + D +SFR Y Sbjct: 19 SSIKLGRAAPGEGLSRRGLLARSAALAALPAPLSALAAGVASDGTTVRGVNEGMPTGEKDVAKFLQQQGFPPLPKV-NGLSPLVQYIGAAPPANIDGSKQKERAFDSTLLVKFLYPSGWLVETPTLTENGEAGKIAANNYLKGDFADFVAAKLP-PGKTLESIDKAF--LTTFLVSQMTGDVYEDVKVGKVK-RLTAADGMDVAYIDFGYTLLTRAGFTVDRKGTACVHVVGGAIVGLVTGTTGQRFKSLEADLRACTESFRAY 277 The following BLAST results are available for this feature:
BLAST of NO11G01100 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 15
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO11G01100 ID=NO11G01100|Name=NO11G01100|organism=Nannochloropsis oceanica|type=gene|length=870bpback to top protein sequence of NO11G01100.1 >NO11G01100.1-protein ID=NO11G01100.1-protein|Name=NO11G01100.1|organism=Nannochloropsis oceanica|type=polypeptide|length=290bpback to top Synonyms
Publications
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