NO11G00980, NO11G00980 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO11G00980 vs. NCBI_GenBank
Match: OAY66246.1 (E3 ubiquitin-protein ligase [Ananas comosus]) HSP 1 Score: 78.2 bits (191), Expect = 7.700e-11 Identity = 31/63 (49.21%), Postives = 43/63 (68.25%), Query Frame = 0 Query: 407 STELERMRRESMGNARDCSVCMEEFELGDVTRRLPCLHTYHKACIDRWLLQCNAMCPICKVPI 470 STEL +++ E+ +C VC+ F G+ TR LPC H +H+AC+DRWLL C CP+C+VPI Sbjct: 33 STELLKLKAEA---GEECCVCLSRFGEGEATRELPCRHLFHRACVDRWLLSCRRTCPLCRVPI 92
BLAST of NO11G00980 vs. NCBI_GenBank
Match: OAY66250.1 (E3 ubiquitin-protein ligase [Ananas comosus]) HSP 1 Score: 78.2 bits (191), Expect = 7.700e-11 Identity = 31/63 (49.21%), Postives = 43/63 (68.25%), Query Frame = 0 Query: 407 STELERMRRESMGNARDCSVCMEEFELGDVTRRLPCLHTYHKACIDRWLLQCNAMCPICKVPI 470 STEL +++ E+ +C VC+ F G+ TR LPC H +H+AC+DRWLL C CP+C+VPI Sbjct: 23 STELLKLKAEA---GEECCVCLSRFGEGEATRELPCRHLFHRACVDRWLLSCRRTCPLCRVPI 82
BLAST of NO11G00980 vs. NCBI_GenBank
Match: XP_002290665.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED92417.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 77.8 bits (190), Expect = 1.000e-10 Identity = 41/99 (41.41%), Postives = 58/99 (58.59%), Query Frame = 0 Query: 374 MSYEDLLNLFGPGHEPQK--ASEVAVSALPEVTVSS-TELERMRRESMGNARDCSVCMEEFELGDVTRRLPCLHTYHKACIDRWLLQCNAMCPICKVPI 470 MSYE LL +FG G+E + A+ A+S+LP + T+L +RE C +C+EEF+ GD LPCLH +H+ C+ RW L N CP+CK + Sbjct: 306 MSYERLLEVFGDGNENRNLAATPSAISSLPFSKIDDPTKLPADKRE-------CCICLEEFKTGDERTTLPCLHGFHRLCVTRW-LGSNGTCPVCKTAV 396
BLAST of NO11G00980 vs. NCBI_GenBank
Match: XP_009387746.1 (PREDICTED: uncharacterized protein LOC103974609 isoform X5 [Musa acuminata subsp. malaccensis] >XP_009387747.1 PREDICTED: uncharacterized protein LOC103974609 isoform X5 [Musa acuminata subsp. malaccensis]) HSP 1 Score: 77.8 bits (190), Expect = 1.000e-10 Identity = 38/95 (40.00%), Postives = 54/95 (56.84%), Query Frame = 0 Query: 372 DRMSYEDLLNLFGPGHEPQKASEVAVSALPEVTVSSTELERMRRESMGNARDCSVCMEEFELGDVTRRLPCLHTYHKACIDRWLLQCNAMCPICK 467 D YE LL L H+ ASE ++ LP+ TV + +E +C+VC+E+ +GD+ R LPCLH +HK CID+WL + CP+CK Sbjct: 673 DENDYETLLALDENNHQHSGASENQINNLPQSTVQADTIE-----------ECAVCLEKPSIGDIIRHLPCLHKFHKDCIDQWLRR-KTSCPVCK 755
BLAST of NO11G00980 vs. NCBI_GenBank
Match: XP_018677419.1 (PREDICTED: uncharacterized protein LOC103974609 isoform X2 [Musa acuminata subsp. malaccensis]) HSP 1 Score: 77.8 bits (190), Expect = 1.000e-10 Identity = 38/95 (40.00%), Postives = 54/95 (56.84%), Query Frame = 0 Query: 372 DRMSYEDLLNLFGPGHEPQKASEVAVSALPEVTVSSTELERMRRESMGNARDCSVCMEEFELGDVTRRLPCLHTYHKACIDRWLLQCNAMCPICK 467 D YE LL L H+ ASE ++ LP+ TV + +E +C+VC+E+ +GD+ R LPCLH +HK CID+WL + CP+CK Sbjct: 703 DENDYETLLALDENNHQHSGASENQINNLPQSTVQADTIE-----------ECAVCLEKPSIGDIIRHLPCLHKFHKDCIDQWLRR-KTSCPVCK 785
BLAST of NO11G00980 vs. NCBI_GenBank
Match: XP_003055036.1 (predicted protein [Micromonas pusilla CCMP1545] >EEH60288.1 predicted protein [Micromonas pusilla CCMP1545]) HSP 1 Score: 77.4 bits (189), Expect = 1.300e-10 Identity = 45/113 (39.82%), Postives = 66/113 (58.41%), Query Frame = 0 Query: 362 MTMIQQQDAVDRMSYEDLLNLFGPGHE-PQKASEVAVSALPEVTVSSTELERMRRESMGNARDCSVCMEEFELGDVTRRLP-CLHTYHKACIDRWLLQCNAMCPICKVPIAQT 473 MT + D VD M+YE+LL FGPG E A A+ A+P T+++ + + A C VC++EF +G+ + LP C H +H CID+WLL NA CP+C+V + +T Sbjct: 1 MTSLVAAD-VDAMTYEELLETFGPGVEGVAGAPAAAIDAVPTSTLAADYAWKDAISDV-EASSCRVCLDEFRVGEKVKALPSCGHRFHAPCIDKWLLGRNA-CPMCRVGLPET 110
BLAST of NO11G00980 vs. NCBI_GenBank
Match: XP_019166072.1 (PREDICTED: uncharacterized protein LOC109161945 isoform X1 [Ipomoea nil]) HSP 1 Score: 77.4 bits (189), Expect = 1.300e-10 Identity = 43/106 (40.57%), Postives = 55/106 (51.89%), Query Frame = 0 Query: 365 IQQQDAVDRMSYEDLLNLFGPGHEPQKASEVAVSALPEVTVSSTELERMRRESMGNARDCSVCMEEFELGDVTRRLPCLHTYHKACIDRWLLQCNAMCPICKVPIA 471 +Q Q + YE LL L H+ AS ++ LPE TV + LE CS+C+E +GD R LPCLH +HK CID W LQ + CP+CK IA Sbjct: 675 LQTQRDFNENDYEMLLALDENNHQHAGASMHQINGLPESTVQNENLEEA----------CSICLENPTMGDTIRHLPCLHKFHKDCIDPW-LQRRSSCPVCKSSIA 769
BLAST of NO11G00980 vs. NCBI_GenBank
Match: XP_019166073.1 (PREDICTED: uncharacterized protein LOC109161945 isoform X2 [Ipomoea nil] >XP_019166074.1 PREDICTED: uncharacterized protein LOC109161945 isoform X2 [Ipomoea nil] >XP_019166075.1 PREDICTED: uncharacterized protein LOC109161945 isoform X2 [Ipomoea nil] >XP_019166076.1 PREDICTED: uncharacterized protein LOC109161945 isoform X2 [Ipomoea nil]) HSP 1 Score: 77.4 bits (189), Expect = 1.300e-10 Identity = 43/106 (40.57%), Postives = 55/106 (51.89%), Query Frame = 0 Query: 365 IQQQDAVDRMSYEDLLNLFGPGHEPQKASEVAVSALPEVTVSSTELERMRRESMGNARDCSVCMEEFELGDVTRRLPCLHTYHKACIDRWLLQCNAMCPICKVPIA 471 +Q Q + YE LL L H+ AS ++ LPE TV + LE CS+C+E +GD R LPCLH +HK CID W LQ + CP+CK IA Sbjct: 669 LQTQRDFNENDYEMLLALDENNHQHAGASMHQINGLPESTVQNENLEEA----------CSICLENPTMGDTIRHLPCLHKFHKDCIDPW-LQRRSSCPVCKSSIA 763
BLAST of NO11G00980 vs. NCBI_GenBank
Match: XP_012209522.1 (hypothetical protein SPRG_15094 [Saprolegnia parasitica CBS 223.65] >KDO19760.1 hypothetical protein SPRG_15094 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 77.0 bits (188), Expect = 1.700e-10 Identity = 41/100 (41.00%), Postives = 55/100 (55.00%), Query Frame = 0 Query: 372 DRMSYEDLLNLFGPGHEPQK---ASEVAVSALPEVTVSSTELERMRRESMGNARDCSVCMEEFELGDVTRRLPCLHTYHKACIDRWLLQCNAMCPICKVP 469 D YE LL L H K ASE + LP VTV+ T L+ + + +A CS+C+E+ +G + R +PC H +H CID WL + A CPICK P Sbjct: 96 DSNDYEQLLQL--DEHNVAKSHGASEGDIDRLPVVTVTETMLQGHKEATGSDAIQCSICLEDLAVGALARMVPCFHRFHPECIDLWLFE-KAECPICKFP 192
BLAST of NO11G00980 vs. NCBI_GenBank
Match: XP_015692280.1 (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC102703674 [Oryza brachyantha]) HSP 1 Score: 76.3 bits (186), Expect = 2.900e-10 Identity = 38/99 (38.38%), Postives = 52/99 (52.53%), Query Frame = 0 Query: 368 QDAVDRMSYEDLLNLFGPGHEPQKASEVAVSALPEVTVSSTELERMRRESMGNARDCSVCMEEFELGDVTRRLPCLHTYHKACIDRWLLQCNAMCPICK 467 Q +D Y+ LL L H+ ASE ++ LP+ V S +E C+VC+E +GD RRLPC H +HK CID WL + +CP+CK Sbjct: 628 QPNIDLNDYDALLALDENNHQHAGASESQINNLPQSVVQSNNIE----------EPCAVCLENPSIGDTIRRLPCFHMFHKECIDEWLRR-KKLCPVCK 715 The following BLAST results are available for this feature:
BLAST of NO11G00980 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO11G00980 ID=NO11G00980|Name=NO11G00980|organism=Nannochloropsis oceanica|type=gene|length=1419bpback to top protein sequence of NO11G00980.1 >NO11G00980.1-protein ID=NO11G00980.1-protein|Name=NO11G00980.1|organism=Nannochloropsis oceanica|type=polypeptide|length=473bpback to top Synonyms
Publications
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