NO11G00980, NO11G00980 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO11G00980 vs. NCBI_GenBank
Match: EWM25151.1 (Zinc finger, RanBP2-type [Nannochloropsis gaditana]) HSP 1 Score: 95.9 bits (237), Expect = 3.600e-16 Identity = 82/229 (35.81%), Postives = 107/229 (46.72%), Query Frame = 0 Query: 93 TTIDLTGSSPLNSGRPTLPSIHAPAAAAA----IAMAGNRNLDRGRDDEVVYDSEDDRSSDMAGSGEA-AGRPKDDGVGG-GGRLKGV-----CNEEDNEEEEDGVQIQCATCTFFNEPDMDICQMCMAPLT-----------NQXXXXXXXXXXXXXXDVRELNAHARWTCPLCTYGGNTRGNXXXXXXEVGRPRRQDMLGSTNNDGYVMVSPDALSRGSGGWGRQRG 300 T IDLTG+SP G + S+H+P +A + AG + D G V D D + G A GR + G G GV E+ + E+D VQ+QC CTF N P MD+CQMC+ PLT + + + A WTCPLCT+ GN RGN E+GRPRRQDML + + +GY+MVS + RG G RG Sbjct: 60 TMIDLTGNSP---GVVDI-SVHSPPSAIEATEDVRTAGGWSCDSGE----VSDRTDVHGEGVVREGHAQEGRCHTNTHGPMGSTGHGVDPAERGGEKGDPGEDDSVQVQCPVCTFNNPPSMDLCQMCVHPLTIGLAGRVLHVQHGRVGGGGRGRESGCGGAGDEDLPALWTCPLCTFCGNRRGNWVCQACEMGRPRRQDMLDAESEEGYLMVS-EGTVRGRAGRPGPRG 279
BLAST of NO11G00980 vs. NCBI_GenBank
Match: GAQ79751.1 (Zinc finger RING-type domain containing protein [Klebsormidium nitens]) HSP 1 Score: 92.4 bits (228), Expect = 4.000e-15 Identity = 46/106 (43.40%), Postives = 65/106 (61.32%), Query Frame = 0 Query: 368 QDAVDRMSYEDLLNLFGPGHEPQKASEVAVSALPEVTVSSTELERMRRESMGNARDCSVCMEEFELGDVTRRLP-CLHTYHKACIDRWLLQCNAMCPICKVPIAQT 473 Q VD MSYE+L FGPG AS A+++LP T+ ER RR+S+GN C +C++E GD R LP C HT+H+ C+D WL Q + +CP+C+ I ++ Sbjct: 206 QVEVDDMSYEELYEFFGPGRVTYGASPAAIASLPLHTIG----ERDRRDSVGNPIGCPICLQELCAGDRARSLPFCRHTFHQPCVDTWLSQ-HGICPVCRHDIRES 306
BLAST of NO11G00980 vs. NCBI_GenBank
Match: XP_002503907.1 (predicted protein [Micromonas commoda] >ACO65165.1 predicted protein [Micromonas commoda]) HSP 1 Score: 89.0 bits (219), Expect = 4.400e-14 Identity = 49/111 (44.14%), Postives = 66/111 (59.46%), Query Frame = 0 Query: 360 QQMTMIQQQDAVDRMSYEDLLNLFGPGHE-PQKASEVAVSALPEVTVSSTELERM-RRESMGNARDCSVCMEEFELGDVTRRLP-CLHTYHKACIDRWLLQCNAMCPICKV 468 Q + I Q VD MSYE+LL+ FGPG E P A AV A+P ++ ++E + R E+ R C VC+E++ GD + LP C H +H CIDRWLL C CP+C+V Sbjct: 117 QLLEAILVQANVDDMSYEELLDRFGPGIEGPAAAPASAVRAVPRRRLTGKDVEALVRNETRSTERACCVCLEDYGKGDTVKTLPRCGHRFHAHCIDRWLL-CRNACPVCRV 226
BLAST of NO11G00980 vs. NCBI_GenBank
Match: GAX18308.1 (E3 ubiquitin-protein ligase Arkadia [Fistulifera solaris]) HSP 1 Score: 87.0 bits (214), Expect = 1.700e-13 Identity = 42/103 (40.78%), Postives = 61/103 (59.22%), Query Frame = 0 Query: 367 QQDAVDRMSYEDLLNLFGPGHEPQKASEVAVSALPEVTVSSTELERMRRESMGNARDCSVCMEEFELGDVTRRLPCLHTYHKACIDRWLLQCNAMCPICKVPI 470 +Q +D M+YE LL FG G E + A E + +LP TV+ T + DC +C+E F++GD + LPCLH +H AC+D+W L+ +A CP+CK I Sbjct: 295 RQMNIDGMNYEQLLEAFGDGTENRGADEGDIRSLPVSTVTDTS------TIPNDHSDCMICLETFKVGDERKTLPCLHGFHSACVDKW-LRTSASCPVCKYSI 390
BLAST of NO11G00980 vs. NCBI_GenBank
Match: GAX16667.1 (E3 ubiquitin-protein ligase Arkadia [Fistulifera solaris]) HSP 1 Score: 85.5 bits (210), Expect = 4.800e-13 Identity = 41/103 (39.81%), Postives = 60/103 (58.25%), Query Frame = 0 Query: 367 QQDAVDRMSYEDLLNLFGPGHEPQKASEVAVSALPEVTVSSTELERMRRESMGNARDCSVCMEEFELGDVTRRLPCLHTYHKACIDRWLLQCNAMCPICKVPI 470 +Q +D M+YE LL FG G E + A E + +LP TV+ T + DC +C+E F++GD + LPCLH +H C+D+W L+ +A CP+CK I Sbjct: 297 RQMNIDGMNYEQLLEAFGDGTENRGADEGDIRSLPVSTVTDTS------TIPNDHSDCMICLETFKVGDERKTLPCLHGFHSTCVDKW-LRTSASCPVCKYSI 392
BLAST of NO11G00980 vs. NCBI_GenBank
Match: XP_014148296.1 (hypothetical protein SARC_13057, partial [Sphaeroforma arctica JP610] >KNC74394.1 hypothetical protein SARC_13057, partial [Sphaeroforma arctica JP610]) HSP 1 Score: 82.4 bits (202), Expect = 4.100e-12 Identity = 39/110 (35.45%), Postives = 63/110 (57.27%), Query Frame = 0 Query: 357 SQFQQMTMIQQQDAVDRMSYEDLLNLFGPGHEPQKASEVAVSALPEVTVSSTELERMRRESMGNARDCSVCMEEFELGDVTRRLPCLHTYHKACIDRWLLQCNAMCPICK 467 +Q ++ D +D M+YE+L+ F P + A+ + ALP T+S + ++ S ++C +C+E+F+ G+ +RLPCLHTYH CID WL + CP+CK Sbjct: 15 TQVPVVSHFNPSDVIDNMNYEELMQRF-PPQVGRAANRWLIHALPTETLSKAAIAKLEEGS----QNCCICLEDFKAGEKMKRLPCLHTYHDHCIDEWLSR-RGTCPVCK 118
BLAST of NO11G00980 vs. NCBI_GenBank
Match: XP_009418621.2 (PREDICTED: uncharacterized protein LOC103998767 isoform X1 [Musa acuminata subsp. malaccensis]) HSP 1 Score: 80.5 bits (197), Expect = 1.600e-11 Identity = 42/108 (38.89%), Postives = 59/108 (54.63%), Query Frame = 0 Query: 363 TMIQQQDAVDRMSYEDLLNLFGPGHEPQKASEVAVSALPEVTVSSTELERMRRESMGNARDCSVCMEEFELGDVTRRLPCLHTYHKACIDRWLLQCNAMCPICKVPIA 471 T++ Q+D + YE LL L H+ ASE ++ LPE + +S GN C +C+E +GDV R LPCLH +HK CID WL + +CP+CK I+ Sbjct: 796 TLLVQRD-ITEDDYEMLLGLDEDNHQHSGASESQINILPESVI----------QSNGNVEACVICLEPPTVGDVIRHLPCLHKFHKECIDTWLRR-KTLCPVCKSGIS 891
BLAST of NO11G00980 vs. NCBI_GenBank
Match: XP_017226548.1 (PREDICTED: E3 ubiquitin-protein ligase RNF12 [Daucus carota subsp. sativus] >KZM83215.1 hypothetical protein DCAR_030784 [Daucus carota subsp. sativus]) HSP 1 Score: 79.0 bits (193), Expect = 4.500e-11 Identity = 41/104 (39.42%), Postives = 56/104 (53.85%), Query Frame = 0 Query: 363 TMIQQQDAVDRMSYEDLLNLFGPGHEPQKASEVAVSALPEVTVSSTELERMRRESMGNARDCSVCMEEFELGDVTRRLPCLHTYHKACIDRWLLQCNAMCPICK 467 +++Q Q + YE LL L H+ AS ++ALPE TV + LE +CS+C+E +GD R LPCLH +HK CID W+ + CPICK Sbjct: 678 SLLQAQRDFNENDYEMLLALDENNHQHGGASAAQINALPESTVQTDNLE-----------ECSICLETPSIGDTIRHLPCLHKFHKDCIDEWVRR-RTTCPICK 769
BLAST of NO11G00980 vs. NCBI_GenBank
Match: XP_024368279.1 (uncharacterized protein LOC112278768 isoform X2 [Physcomitrella patens] >PNR60044.1 hypothetical protein PHYPA_002837 [Physcomitrella patens]) HSP 1 Score: 78.6 bits (192), Expect = 5.900e-11 Identity = 38/95 (40.00%), Postives = 55/95 (57.89%), Query Frame = 0 Query: 376 YEDLLNLFGPGHEPQKASEVAVSALPEVTVSSTELERMRRESMGNARDCSVCMEEFELGDVTRRLPCLHTYHKACIDRWLLQCNAMCPICKVPIA 471 YE LL L + AS ++ LP T++ T++ DCS+C+E GD+ RRLPC+H +H+ CID+W LQC A+CP+CK I+ Sbjct: 600 YEMLLALDTDNSSHRGASMETINQLPVTTIAPTDV----------FEDCSICLEVPVSGDIVRRLPCMHVFHQPCIDQW-LQCQAVCPVCKAHIS 683
BLAST of NO11G00980 vs. NCBI_GenBank
Match: XP_024368276.1 (uncharacterized protein LOC112278768 isoform X1 [Physcomitrella patens] >XP_024368277.1 uncharacterized protein LOC112278768 isoform X1 [Physcomitrella patens] >XP_024368278.1 uncharacterized protein LOC112278768 isoform X1 [Physcomitrella patens]) HSP 1 Score: 78.6 bits (192), Expect = 5.900e-11 Identity = 38/95 (40.00%), Postives = 55/95 (57.89%), Query Frame = 0 Query: 376 YEDLLNLFGPGHEPQKASEVAVSALPEVTVSSTELERMRRESMGNARDCSVCMEEFELGDVTRRLPCLHTYHKACIDRWLLQCNAMCPICKVPIA 471 YE LL L + AS ++ LP T++ T++ DCS+C+E GD+ RRLPC+H +H+ CID+W LQC A+CP+CK I+ Sbjct: 610 YEMLLALDTDNSSHRGASMETINQLPVTTIAPTDV----------FEDCSICLEVPVSGDIVRRLPCMHVFHQPCIDQW-LQCQAVCPVCKAHIS 693 The following BLAST results are available for this feature:
BLAST of NO11G00980 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO11G00980 ID=NO11G00980|Name=NO11G00980|organism=Nannochloropsis oceanica|type=gene|length=1419bpback to top protein sequence of NO11G00980.1 >NO11G00980.1-protein ID=NO11G00980.1-protein|Name=NO11G00980.1|organism=Nannochloropsis oceanica|type=polypeptide|length=473bpback to top Synonyms
Publications
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