NO11G00880, NO11G00880 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO11G00880 vs. NCBI_GenBank
Match: EWM25123.1 (hypothetical protein Naga_100016g52 [Nannochloropsis gaditana]) HSP 1 Score: 353.6 bits (906), Expect = 1.600e-93 Identity = 230/528 (43.56%), Postives = 305/528 (57.77%), Query Frame = 0
Query: 271 KKSTYKKSHYVSEAPKRLELVADRHSKGTLLNATIRIKNPDVRTKAFGWSHRGDNFFALALMSVKGERILPELYKDVPLRYRIAALASKL--DSKGEEINTEEVLYDEAGQSTVGGLFYFRVPQFKTPGRYSISFRFSREAPSAFRKIDPVSQIVLVVPIDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGPQTFGLGDLTDSTEKARSLRSQERNLGGSSMAFSAALLGEGGGSRDCFSVDCAAGTGGNAGSKRQQSLEGRFASHVMQSPVFGLSLRDVEQRGRLVSLIIPAGLRLRLAEDWYAVTRKRYLTGNIPRGLTGCSGDADDGERGVKQRRELR--QLPNVKEVIWGYEKTLPSSSPVSLSSSDAKGSNGPMGERLCTLFDGALGNLLLYRFEMNQYLALLEGLKESKRPPHQVWGAEHLLRLLAITPRLLASESRGGSKISTDDDK-----DLEGEFSKEDGESASIVEQAEEARFYIQGLLNHLAEHQDTLFAPYEEQPRAFGLDV 790
+K+ ++S + EAP RLELVADRHSKG LL+A IRIK PDV KAF WS R D +FAL + S KG RILPEL K+VPLRYRIA++ ++ ++ +E EEVLYDEAG++T GG++YFRVPQFK PG YSISF+ + P+AF K+DPVSQIV VVP D P+ + T RSLRSQ + GS+ S A +G G + D A G GGNA + Q SLE A+ V + L+ ++ +G+L++L+IP LR +L EDW+A+TR+R + G +PR DG++ ++ ++ Q P+V EV+ YE+++P++ S D KG +G RLCTLFDGALGN+LLYRFEM+QYL+LLE L + PHQ+WGAEHLLRLLAI PRLL + +K D++ + E E S + E AR Y+QGLL+ L Q +LFA Y E P FGLDV
Sbjct: 122 EKAAARQSGSLREAPHRLELVADRHSKGALLDALIRIKPPDVLMKAFKWSSRNDKYFALTVFSAKGNRILPELLKEVPLRYRIASVGARRSNETTSKETGEEEVLYDEAGKATHGGMYYFRVPQFKIPGCYSISFQL--QGPAAFNKLDPVSQIVTVVPADALEHTDPFP----------------------------------PRAQENEAMALPTGTLRSLRSQRQGAEGSA---SNAAVGRGS------TRDPALGGGGNA--RVQHSLEKHLAASVKEDTDSMLTFDELWLKGQLLTLVIPGALRQQLCEDWFAITRRRCVVGALPR---------HDGKKNIRLGKQTSNPQWPSVGEVVRMYERSIPAA-----SLGDFKG----LGARLCTLFDGALGNVLLYRFEMDQYLSLLE-LGGKSKLPHQIWGAEHLLRLLAIAPRLLGIQKSTSNKKRVDEESSDTLMNSEAPVGMEVERPGS--REIEVARTYLQGLLDFLETEQASLFASYVEPPGKFGLDV 581
BLAST of NO11G00880 vs. NCBI_GenBank
Match: XP_003030574.1 (hypothetical protein SCHCODRAFT_57285 [Schizophyllum commune H4-8] >EFI95671.1 hypothetical protein SCHCODRAFT_57285 [Schizophyllum commune H4-8]) HSP 1 Score: 71.2 bits (173), Expect = 1.600e-8 Identity = 49/154 (31.82%), Postives = 73/154 (47.40%), Query Frame = 0
Query: 568 VSLIIPAGLRLRLAEDWYAVTRKRYLTGNIPRGLTGCSGDADDGERGVKQRRELRQLPNVKEVIWGYEKTLPSSSPVSLSSSDAKGSNGPMGERLCTLFDGALGNLLLYRFEMNQYLALLEGLKESKRPPHQVWGAEHLLRLLAITPRLLASES 722
+ L +P +++RL +DW AVT+ L ++PR PNVK+++ +E + P SL DA + G L T FD ALG LLYRFE QY + E + + +GAEH LR+L P+++A+ S
Sbjct: 142 LKLEMPEAMKVRLVDDWEAVTKNNQLV-SLPR------------------------QPNVKQILEEFEAYVRRERPASLPDIDALLPSIISG--LKTYFDKALGKNLLYRFERPQYANIREKFDAEGKEMSEAYGAEHFLRMLVSLPQMVAAAS 268
BLAST of NO11G00880 vs. NCBI_GenBank
Match: CEQ38904.1 (SPOSA6832_00380, partial [Sporidiobolus salmonicolor]) HSP 1 Score: 69.7 bits (169), Expect = 4.600e-8 Identity = 52/167 (31.14%), Postives = 80/167 (47.90%), Query Frame = 0
Query: 556 LSLRDVEQRGRL-VSLIIPAGLRLRLAEDWYAVTRKRYLTGNIPRGLTGCSGDADDGERGVKQRRELRQLPNVKEVIWGYEKTLPSSSPVSLSSSDAKGSNGPMGERLCTLFDGALGNLLLYRFEMNQYLALLEGLKESKRPPHQVWGAEHLLRLLAITPRLLASES 722
+S+++ E ++ V + IP L+ +L +DW A+T+ + + G D D GV+Q L + P+V ++ + K L + D K + L F+ ALGN LLYRFE QY + L+ + + V+G EHLLRL P LLA S
Sbjct: 168 MSVQEEEYMRKMEVKIAIPDNLKTQLVDDWEAITKNQQVRRFDDPFRAGPPVDGD----GVRQLVPLPRNPSVDVILDEWLKYLQN------EEEDKKRLAAEVAAGLGLYFNKALGNNLLYRFERGQYQEQYKALQGTDKQMSSVYGGEHLLRLFVNLPELLAHTS 324
BLAST of NO11G00880 vs. NCBI_GenBank
Match: OAV88052.1 (hypothetical protein PTTG_05657 [Puccinia triticina 1-1 BBBD Race 1]) HSP 1 Score: 69.3 bits (168), Expect = 6.000e-8 Identity = 47/151 (31.13%), Postives = 77/151 (50.99%), Query Frame = 0
Query: 568 VSLIIPAGLRLRLAEDWYAVTRKRYLTGNIPRGLTGCSGDADDGERGVKQRRELRQLPNVKEVIWGYEKTLPSSSPVSLSSSDAKGSNGPMGERLCTLFDGALGNLLLYRFEMNQYLALLEGLKESKRPPHQVWGAEHLLRLLAITPRLLA 719
++++IP L+L+L +DW AVTRK + ++PR PNVK ++ YE+ + S +++ AK + L FD +LG+ LLYR E QY+ + LK + P +++GAEHLLRL+ P +++
Sbjct: 138 ITIVIPEPLKLQLVDDWEAVTRKNQVV-SLPRS------------------------PNVKSLLEEYEQYAVNDS----TTAQAKNLIKEVNAGLKVYFDKSLGHCLLYRNERQQYIDTRKKLK--CKLPSEIYGAEHLLRLIVNLPEMIS 257
BLAST of NO11G00880 vs. NCBI_GenBank
Match: XP_020072514.1 (MRG-domain-containing protein [Cyberlindnera jadinii NRRL Y-1542] >ODV75475.1 MRG-domain-containing protein [Cyberlindnera jadinii NRRL Y-1542]) HSP 1 Score: 67.4 bits (163), Expect = 2.300e-7 Identity = 49/165 (29.70%), Postives = 75/165 (45.45%), Query Frame = 0
Query: 568 VSLIIPAGLRLRLAEDWYAVTRKRYLTGNIPRGLTGCSGDADDGERGVKQRRELRQLPNVKEVIWGYEKTLPSSSPVSLSSSDAKGSNGPMGERLCTLFDGALGNLLLYRFEMNQYLALLEGLKESKRPPHQVWGAEHLLRLLAITPRLLASESRGGSKISTDDD 733
++++IP L+ L +DW VT++ L L PNV ++ + ++L S V D S G R+ F+ +LGN+LLYRFE QYL + + K + P Q++GAEHLLRL+ P L+A + + T D
Sbjct: 148 INILIPDTLKSLLVDDWELVTKEHQLL-------------------------SLPTKPNVDSLLRTFRQSLGRKSSVENEILDEFLS----GMRI--YFNRSLGNILLYRFERQQYLEITKDPKLKDQEPSQIYGAEHLLRLMVSLPALIAQTTMDQQSVGTLKD 281
BLAST of NO11G00880 vs. NCBI_GenBank
Match: ODV91922.1 (hypothetical protein CANCADRAFT_18276, partial [Tortispora caseinolytica NRRL Y-17796]) HSP 1 Score: 67.0 bits (162), Expect = 3.000e-7 Identity = 52/166 (31.33%), Postives = 75/166 (45.18%), Query Frame = 0
Query: 568 VSLIIPAGLRLRLAEDWYAVTRKRYLTGNIPRGLTGCSGDADDGERGVKQRRELRQLPNVKEVIWGYEKTLPS-----SSPVSLSSSDAKGSNGPMGERLCTLFDGALGNLLLYRFEMNQYLALLEGLKESKRPPHQVWGAEHLLRLLAITPRLLASESRGGSKIS 729
VSL+IP L+ L +DW VT+ L ++PR P+V E++ Y+K+ S SS + + G L FD ALGN+LLY+FE QYL + + K ++ V+GAEHLLRL P L+A + +S
Sbjct: 142 VSLVIPDPLKRYLVDDWERVTKNHQLV-SLPR------------------------KPSVSEILSQYKKSRGSKLGEGSSKMEILEEVVSG--------LALYFDRALGNMLLYKFERQQYLEIRK--KYAEFIASDVYGAEHLLRLFVSLPELIAQTNMDAQSVS 272
BLAST of NO11G00880 vs. NCBI_GenBank
Match: ORX57784.1 (MRG-domain-containing protein, partial [Piromyces finnis]) HSP 1 Score: 65.9 bits (159), Expect = 6.600e-7 Identity = 48/152 (31.58%), Postives = 70/152 (46.05%), Query Frame = 0
Query: 568 VSLIIPAGLRLRLAEDWYAVTRKRYLTGNIPRGLTGCSGDADDGERGVKQRRELRQLPNVKEVIWGYEKTLPSSSPVSLSSSDAKGSN--GPMGERLCTLFDGALGNLLLYRFEMNQYLALLEGLKESKRPPHQVWGAEHLLRLLAITPRLL 718
+ + IP L+L+L EDW +T+ + L L + PNV E++ Y+KT + L D K + M + + FD ALGN+LLY FE QY+ + +E K +++GAEHLLRL P LL
Sbjct: 102 IKIPIPDSLKLQLVEDWENITKDKKLV-------------------------PLPRKPNVMEILSEYKKT-----NIELKKEDKKEIDLISEMLDGIQLYFDKALGNILLYHFERQQYIEIENENEEKKM--SEIYGAEHLLRLFVQFPFLL 221 The following BLAST results are available for this feature:
BLAST of NO11G00880 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 7
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO11G00880 ID=NO11G00880|Name=NO11G00880|organism=Nannochloropsis oceanica|type=gene|length=4545bpback to top protein sequence of NO11G00880.1 >NO11G00880.1-protein ID=NO11G00880.1-protein|Name=NO11G00880.1|organism=Nannochloropsis oceanica|type=polypeptide|length=794bpback to top Synonyms
Publications
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