NO11G00810, NO11G00810 (gene) Nannochloropsis oceanica

Overview
NameNO11G00810
Unique NameNO11G00810
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1882
Alignment locationchr11:322751..324632 +

Link to JBrowse

Properties
Property NameValue
DescriptionATPase, F0 complex, subunit B, mitochondrial
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr11genomechr11:322751..324632 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0000276mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)
GO:0016020membrane
GO:0005739mitochondrion
Vocabulary: Biological Process
TermDefinition
GO:0015986ATP synthesis coupled proton transport
GO:0009058biosynthetic process
GO:0006810transport
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0015078proton transmembrane transporter activity
GO:0005215transporter activity
Vocabulary: INTERPRO
TermDefinition
IPR013837ATPase_F0_sub_B/B_chain
IPR008688ATPase_B_chain/sub_B/MI25
Homology
BLAST of NO11G00810 vs. NCBI_GenBank
Match: EWM25153.1 (ATPase, F0 complex, subunit B, mitochondrial [Nannochloropsis gaditana])

HSP 1 Score: 510.8 bits (1314), Expect = 3.100e-141
Identity = 270/324 (83.33%), Postives = 294/324 (90.74%), Query Frame = 0
Query:    1 MLSTLSRRAVLASARSQRVPLVASFHSGPVRRDA-----APPTAVDDHARKPADVTLEGPLDRYGLTDWKLYVPVGLALSVPFLANEWIILSEETQLVAAFVAFGTTVYKYAGGAIGRSLDERQDAIIQEINRLEELELKLYKETIDAATIEKTIVEDLTALEAKSEEMAQKLEVVLTGEVKHRIREQFVRWLDAAVASEKTGKKALVQSFLDQTAVQVTKNFASDAKLKKAAVEQVVAILKDPAAKQADLVGAEFERVGKKLWDDLVKKELAGVAPKEHVAALTAEIKAIKAKGPALSEMDLDNAVRVYHTAMKGGVKPAMLK 320
            MLS LSRRA+ ASAR Q +   ++FHSGPVRRDA     A P AVDD +RKPADV+LEGPL+RYGLTDWK+YVP GLALSVPFLANEW ILSEETQLVAAF+AF TTVYKYAGGAIGRSLDERQ+AII+EINRLEELEL+LYKETIDAAT+EKTIVEDLTALEAKS EMA KLE VL GEVKHRIR+Q+VRWLDAAVASEKTGKKALVQSFLD+TAVQVTKNFASDAKLKKAAV+QVVAILKDPAA+QADLVGAEFERVGK +W++LVKKE  G APKE VA L AEIKAIKAKGPA+SEMDLDNAVRVYHTAMKGG+KPA L+
Sbjct:   44 MLSILSRRALQASARRQCLSAASTFHSGPVRRDAAANSPAAPAAVDDLSRKPADVSLEGPLERYGLTDWKVYVPAGLALSVPFLANEWYILSEETQLVAAFIAFSTTVYKYAGGAIGRSLDERQEAIIEEINRLEELELRLYKETIDAATLEKTIVEDLTALEAKSGEMAHKLEAVLAGEVKHRIRDQYVRWLDAAVASEKTGKKALVQSFLDRTAVQVTKNFASDAKLKKAAVDQVVAILKDPAAEQADLVGAEFERVGKTMWEELVKKETGGAAPKEQVATLAAEIKAIKAKGPAVSEMDLDNAVRVYHTAMKGGIKPAQLR 367          
BLAST of NO11G00810 vs. NCBI_GenBank
Match: XP_012207867.1 (hypothetical protein SPRG_12427 [Saprolegnia parasitica CBS 223.65] >KDO21420.1 hypothetical protein SPRG_12427 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 114.4 bits (285), Expect = 6.600e-22
Identity = 85/272 (31.25%), Postives = 143/272 (52.57%), Query Frame = 0
Query:    1 MLSTLSRRAVLASARSQRVPLVASFHSGPVR----RDAAPPTAVDDHARKPADVTLEGPLDRYGLTDWKLYVPVGLALSVPFLANEWIILSEETQLVAAFVAFGTTVYKYAGGAIGRSLDERQDAIIQEINRLEELELKLYKETIDAATIEKTIVEDLTALEAKSEEMAQKLEVVLTGEVKHRIREQFVRWLDAAVASEKTGKKALVQSFLDQTAVQVTKNFASDAK-LKKAAVEQVVAILKD-PAAKQADLVGAEFERVGKKLWDDLVKKE 267
            MLS  + R+  A+ RS   PL ASFH+G +R    ++     A ++H         +G   + GL DWK+ +P+ LA S+P L+N +  L  E+QL   F+ F T+ YK+ G A+G   + R +AI+ E N +E+  L + KET+ A     TI +D+ AL    EE    +  V + +++H+ R+ +V+ L+A    E++  + L  + + Q A  V   FAS  K +K  A +  + +L + P   + D V A F +  +   ++L K++
Sbjct:    1 MLSRFALRSATAARRSALKPLGASFHTGALRLKEEKEGEVAVAAENH---------DGVFQKIGLDDWKISMPLVLACSIPALSNGFYELGAESQLACCFLLFCTSAYKFGGDAVGSYFEARANAILAEQNAVEDANLAVAKETLKAHEAILTIRKDIDALGVAHEEALALMCRVQSQKLRHKTRDVYVKNLEAIHNLEQSYNQQLQDAMISQAAEAVRSQFASGKKAVKTEAFQMALDVLSEKPDDNKQDPVAAAFGKELRAFAENLEKQQ 263          
BLAST of NO11G00810 vs. NCBI_GenBank
Match: XP_008607972.1 (hypothetical protein SDRG_04092 [Saprolegnia diclina VS20] >EQC38380.1 hypothetical protein SDRG_04092 [Saprolegnia diclina VS20])

HSP 1 Score: 113.2 bits (282), Expect = 1.500e-21
Identity = 84/272 (30.88%), Postives = 143/272 (52.57%), Query Frame = 0
Query:    1 MLSTLSRRAVLASARSQRVPLVASFHSGPVR----RDAAPPTAVDDHARKPADVTLEGPLDRYGLTDWKLYVPVGLALSVPFLANEWIILSEETQLVAAFVAFGTTVYKYAGGAIGRSLDERQDAIIQEINRLEELELKLYKETIDAATIEKTIVEDLTALEAKSEEMAQKLEVVLTGEVKHRIREQFVRWLDAAVASEKTGKKALVQSFLDQTAVQVTKNFASDAK-LKKAAVEQVVAILKD-PAAKQADLVGAEFERVGKKLWDDLVKKE 267
            MLS  + R+  A+ RS   P+ ASFH+G +R    ++     A ++H         +G   + GL DWK+ +P+ LA S+P L+N +  L  E+QL   F+ F T+ YK+ G A+G   + R +AI+ E N +E+  L + KET+ A     TI +D+ AL    EE    +  V + +++H+ R+ +V+ L+A    E++  + L  + + Q A  V   FAS  K +K  A +  + +L + P   + D V A F +  +   ++L K++
Sbjct:    1 MLSRFALRSATAARRSALKPVGASFHTGALRLKEEKEGEVAVAAENH---------DGVFQKIGLDDWKISMPLVLACSIPALSNGFYELGAESQLACCFLLFCTSAYKFGGDAVGSYFEARANAILAEQNAVEDANLAVAKETLKAHEAILTIRKDIDALGVAHEEALALMCRVQSQKLRHKTRDVYVKNLEAIHNLEQSYNQQLQDAMISQAAEAVRSQFASGKKAVKTEAFQMALDVLSEKPDDNKQDPVAAAFGKELRAFAENLEKQQ 263          
BLAST of NO11G00810 vs. NCBI_GenBank
Match: OQR87943.1 (hypothetical protein ACHHYP_07793 [Achlya hypogyna])

HSP 1 Score: 109.4 bits (272), Expect = 2.100e-20
Identity = 81/272 (29.78%), Postives = 143/272 (52.57%), Query Frame = 0
Query:    1 MLSTLSRRAVLASARSQRVPLVASFHSGPVR----RDAAPPTAVDDHARKPADVTLEGPLDRYGLTDWKLYVPVGLALSVPFLANEWIILSEETQLVAAFVAFGTTVYKYAGGAIGRSLDERQDAIIQEINRLEELELKLYKETIDAATIEKTIVEDLTALEAKSEEMAQKLEVVLTGEVKHRIREQFVRWLDAAVASEKTGKKALVQSFLDQTAVQVTKNFASDAK-LKKAAVEQVVAILKD-PAAKQADLVGAEFERVGKKLWDDLVKKE 267
            MLS  + R+  A+ RS   PL ASFH+G +R    ++     A ++H         +G   + GL DWK+ +P+ LA S+P ++N +  L  E+QL   F+ F T+ YK+ G A+G   + R +AI+ E N +E+  L + +ET+ A     TI +D+ AL    +E    +  V + +++H+ R+ +V+ L+A    E++  + L  + + Q A  V   FA+  K +K  A +  + +L + P   + D V A F +  +   ++L K++
Sbjct:    1 MLSRFALRSATAARRSAMKPLGASFHTGALRLKEEKEGEVAVAAENH---------DGVFQKIGLDDWKISMPLVLACSIPAISNGFYELGAESQLACCFLLFCTSAYKFGGDAVGSYFEARANAILAEQNAVEDANLAVAQETLKAHEAILTIRKDIDALGVAHKEALALMCHVQSQKLRHKTRDVYVKNLEAIHQLEQSYNQQLQDAMISQAANNVRSAFAAGKKAVKTEAFQMALDVLSEKPDDNKQDPVAAAFGKELRAFAENLEKQQ 263          
BLAST of NO11G00810 vs. NCBI_GenBank
Match: XP_009826122.1 (hypothetical protein H257_03641 [Aphanomyces astaci] >ETV84430.1 hypothetical protein H257_03641 [Aphanomyces astaci])

HSP 1 Score: 107.8 bits (268), Expect = 6.100e-20
Identity = 85/254 (33.46%), Postives = 125/254 (49.21%), Query Frame = 0
Query:    8 RAVLASARSQRVPLVASFHSGPVRRDAAPPTAVDDHARKPADVTLEGPLDRYGLTDWKLYVPVGLALSVPFLANEWIILSEETQLVAAFVAFGTTVYKYAGGAIGRSLDERQDAIIQEINRLEELELKLYKETIDAATIEKTIVEDLTALEAKSEEMAQKLEVVLTGEVKHRIREQFVRWLDAAVASEKTGKKALVQSFLDQTAVQVTKNFASDAKLKKAAVEQVVAIL---KDPAAKQADLVGAEFERVGKKL 259
            R  L +AR  + P  A+FH+G  R+        D     PAD      L++YGL D  + +P+  A+S+P ++N W  L  ETQL   F  F T+ YKY GGAIG   + R DAI+ E N +E+  L L KET+ A     TI +D+  L    EE    L  V   +++H+ R+ FV+ LDA    E++  + L  + +      V K  ++  K  KA   Q+   +   K+    + D V A F   GK+L
Sbjct:    4 RVALRTARLSK-PTAAAFHTGAFRQQEEKK---DGEVAIPAD--NRSFLNKYGLDDPLISLPIIAAVSIPAISNGWYELGAETQLACCFALFVTSAYKYGGGAIGSYFESRADAILAEQNAVEDANLALAKETLKAHESILTIKKDIATLGVAHEEALALLCQVQNAKLRHKTRDTFVKNLDAIYQLEQSYNQELQNAMIASATAAVRKTISAGKKETKAEAFQLALDILSEKNIDESKPDAVAAAF---GKEL 248          
BLAST of NO11G00810 vs. NCBI_GenBank
Match: XP_008870953.1 (hypothetical protein H310_07347 [Aphanomyces invadans] >ETW00818.1 hypothetical protein H310_07347 [Aphanomyces invadans])

HSP 1 Score: 105.5 bits (262), Expect = 3.100e-19
Identity = 91/291 (31.27%), Postives = 139/291 (47.77%), Query Frame = 0
Query:    5 LSRRAVLASARSQRVPLVASFHSGPVRRDAAPPTAVDDHARKPADVTLEGPLDRYGLTDWKLYVPVGLALSVPFLANEWIILSEETQLVAAFVAFGTTVYKYAGGAIGRSLDERQDAIIQEINRLEELELKLYKETIDAATIEKTIVEDLTALEAKSEEMAQKLEVVLTGEVKHRIREQFVRWLDAAVASEKTGKKALVQSFLDQTAVQVTKNFASDAK-LKKAAVEQVVAILKDPAAKQA--DLVGAEFERVGKKLWDDLVKKE-----LAGVAPKEHVAALTAEIKAIK 288
            LSR A+  +  S   P  A+FH+G  R+        +     PAD      L+RYGL D  + +P+  A+S+P ++N W  L  ETQL   F  F T+ YKY G AIG   + R DAI+ E N +E+  L L KET+ A     TI +D+  L    EE    L  V   +++H+ R+ FV+ L+A    E++  + L ++ +      V K  ++  K +K  A +  + IL + A  +   D V A F +  +   + L  ++     L     KE  A L A  K I+
Sbjct:    2 LSRVALRTARLSAFKPAAAAFHTGAFRQQEEKK---EGEVAIPAD--NRSFLNRYGLDDPLISLPIIAAVSIPAISNGWYELGAETQLACCFALFVTSAYKYGGSAIGSYFESRADAILAEQNAVEDANLALAKETLKAHESILTIKKDIATLGVAHEEALALLCQVQNAKLRHKTRDTFVKNLEAIYQLEQSYNQELQEAMVASATAAVRKTLSAGKKEVKAEAFQLALDILSEKAIDETKPDAVAAAFGKELRAFAEHLEAQQGTVVKLTEAEQKELEAGLDAFFKKIE 287          
BLAST of NO11G00810 vs. NCBI_GenBank
Match: XP_024582005.1 (atp synthase subunit mitochondrial [Plasmopara halstedii] >CEG45636.1 atp synthase subunit mitochondrial [Plasmopara halstedii])

HSP 1 Score: 105.1 bits (261), Expect = 4.000e-19
Identity = 86/266 (32.33%), Postives = 134/266 (50.38%), Query Frame = 0
Query:    7 RRAVLASARSQRVPLV--ASFHS-GPVRRDAAPPTAVDDHARKPADVTLEGPLDRYGLTDWKLYVPVGLALSVPFLANEWIILSEETQLVAAFVAFGTTVYKYAGGAIGRSLDERQDAIIQEINRLEELELKLYKETIDAATIEKTIVEDLTALEAKSEEMAQKLEVVLTGEVKHRIREQFVRWLDAAVASEKTGKKALVQSFLDQTAVQV-TKNFASDAKLKKAAVEQVVAIL--KDPAAKQADLVGAEFERVGKKLWDDLVKKE 267
            R+A L+S++ Q V  +   SFHS G VR+D A    +         V  +G LD+ GLTDWK+  P+  AL++P ++N + +L+EE+QL   F+ F T  YK+ G  I    DER  AI+ E N +E+  L L KET++       I ED+ A+    +E    +  V   +++H+ R+ FV+ L++    E + K  L +  +     +V T     D KLK+ A    + IL   D    + D V A F +  +    DL  K+
Sbjct:    8 RKAALSSSKLQYVKTLRPMSFHSTGSVRKDEAQAEEI--------PVPTQGLLDQAGLTDWKISAPIIGALAIPAISNHFYVLNEESQLACCFLLFCTATYKFGGEMIASYFDERAAAILSEHNAVEDANLALAKETLETHKSMLNIHEDIAAVAEAHKEAIALMCKVQAYKLRHKTRDTFVKNLESIRQIESSYKLELQRCMVASATSKVRTVVQKGDKKLKETAFRHALDILGNVDVDESKEDDVAALFSKELRAYASDLESKQ 265          
BLAST of NO11G00810 vs. NCBI_GenBank
Match: GAX92533.1 (Hypothetical protein PINS_000425 [Pythium insidiosum])

HSP 1 Score: 104.8 bits (260), Expect = 5.200e-19
Identity = 78/223 (34.98%), Postives = 119/223 (53.36%), Query Frame = 0
Query:   37 PTAVDDHARKPADVTLEGPLDRYGLTDWKLYVPVGLALSVPFLANEWIILSEETQLVAAFVAFGTTVYKYAGGAIGRSLDERQDAIIQEINRLEELELKLYKETIDAATIEKTIVEDLTALEAKSEEMAQKLEVVLTGEVKHRIREQFVRWLDAAVASEKTG----KKALVQSFLDQTAVQVTKNFASDAKLKKAAVEQVVAILKDPAAKQA--DLVGAEFER 254
            P   +D A  PA V   G L+++GL DWK+  P+  ALS+P L+    +++EETQL A F  F T+VYK+ G AI    D R  AI+ E N +E+  ++L KET++       I ED+ A+    +E  + L  V   ++KH+ RE FV+ L++    E +     +KA+V S  D+  V + K    D  +K AA +  + IL +    +A  D V A F +
Sbjct:   34 PRQEEDKAAAPAPVH-PGLLNQFGLDDWKISAPLIAALSIPALSKGVYVINEETQLAACFFLFCTSVYKFGGDAIASYFDARASAILSEHNAVEDANIQLAKETLETHKSLLNIHEDVAAVAEAHKEAVKLLCEVQAYKLKHKTRETFVKNLESIRQIEASYNIELQKAMVASATDKVRVTLEK---GDKNIKAAAFKHALDILSEAPVDEAKEDDVAALFAK 252          
BLAST of NO11G00810 vs. NCBI_GenBank
Match: OWZ03960.1 (hypothetical protein PHMEG_00024223 [Phytophthora megakarya])

HSP 1 Score: 101.7 bits (252), Expect = 4.400e-18
Identity = 92/295 (31.19%), Postives = 149/295 (50.51%), Query Frame = 0
Query:    5 LSRRAVLASARSQRVPLV-----ASFH-SGPVRRDAAPPTAVDDHARKPADVTLEGPLDRYGLTDWKLYVPVGLALSVPFLANEWIILSEETQLVAAFVAFGTTVYKYAGGAIGRSLDERQDAIIQEINRLEELELKLYKETIDAATIEKTIVEDLTALEAKSEEMAQKLEVVLTGEVKHRIREQFVRWLDAAVASEKTG----KKALVQSFLDQTAVQVTKNFASDAKLKKAAVEQVVAIL--KDPAAKQADLVGAEFERVGKKLWDDLVKK--ELAGVAPKEHVAALTAEIKA 286
            L R A+  +A S ++P       A  H +G VR+        D+ A +   V  +G LD+ GLTDWK+  P+  ALS+P ++N + +L+EE+QL   F+ F +  YK+ G  I    DER  AI+ E N +E+  L L KET++       I ED+ A+    +E    +  V   +++H+ R+ FV+ L++    E +     +K++V +  +Q    V K    D KLK AA +  + IL   D   K+ D V A F +  +    DL  K  ++  + P+E  + L A++ A
Sbjct:    2 LGRIALRKAALSSKLPSAKLLRPAGLHTTGVVRK--------DEDASEEITVPTQGLLDQAGLTDWKISAPIIGALSIPAISNHFYVLNEESQLACCFLLFCSASYKFGGEMIASYFDERAAAILGEHNAVEDANLDLAKETLETHKAMLNIHEDIAAVAEAHKEAVALMCEVQAYKLRHKTRDTFVKNLESIREIESSYNLELQKSMVANATNQVRAVVQK---GDKKLKDAAFKHALDILGNADVDDKKEDDVAALFTKELRAYASDLESKQGQVVKLTPEEQ-SELQADLDA 284          
BLAST of NO11G00810 vs. NCBI_GenBank
Match: XP_009519889.1 (hypothetical protein PHYSODRAFT_284942 [Phytophthora sojae] >EGZ24601.1 hypothetical protein PHYSODRAFT_284942 [Phytophthora sojae])

HSP 1 Score: 95.9 bits (237), Expect = 2.400e-16
Identity = 85/294 (28.91%), Postives = 144/294 (48.98%), Query Frame = 0
Query:    7 RRAVLAS---ARSQRVPLVASFHSGPVRRDAAPPTAVDDHARKPADVTLEGPLDRYGLTDWKLYVPVGLALSVPFLANEWIILSEETQLVAAFVAFGTTVYKYAGGAIGRSLDERQDAIIQEINRLEELELKLYKETIDAATIEKTIVEDLTALEAKSEEMAQKLEVVLTGEVKHRIREQFVRWLDAAVASEKTGKKALVQSFLDQTAVQVTKNFASDAKLKKAAVEQVVAILKDPAAKQADLVGAEFERVGKKLWDDLVKKELAGVAPKEHVAALTAEIKAIKAKGPALSEMD 298
            R+AVL S   A +Q +  +    +G VR+         + A +   V  EG LD+ GLTDWK+  P+  AL++P ++N + +L+EE+QL   F  F +  YK+ G  I    DER  AI+ E N +E+  L L KET++       I ED+ A+    +E    +  V   +++H+ R+ FV+ L++    E +    L +S +     +V           +A VE+    LKD A K A       + +G    D+  + ++A +  KE + A  A+++A + +   L+E +
Sbjct:    8 RKAVLRSSKLASAQNLRPMGLHTTGVVRK--------QEEASEEIPVPTEGLLDQAGLTDWKISAPIIGALAIPAISNHFYVLNEESQLACCFFLFCSAAYKFGGEMIASYFDERAAAILGEHNAVEDANLNLAKETLETHKAMLNIHEDIAAVAEAHKEAVALMCEVQAYKLRHKTRDTFVKNLESIREIEASYNLELQKSMVANATSKV-----------RAVVEKGDKKLKDAAFKNA------LDVLGNAKVDENKEDDVAALFTKE-LRAYAADLEAKQGQVVKLTEAE 275          
The following BLAST results are available for this feature:
BLAST of NO11G00810 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM25153.13.100e-14183.33ATPase, F0 complex, subunit B, mitochondrial [Nann... [more]
XP_012207867.16.600e-2231.25hypothetical protein SPRG_12427 [Saprolegnia paras... [more]
XP_008607972.11.500e-2130.88hypothetical protein SDRG_04092 [Saprolegnia dicli... [more]
OQR87943.12.100e-2029.78hypothetical protein ACHHYP_07793 [Achlya hypogyna... [more]
XP_009826122.16.100e-2033.46hypothetical protein H257_03641 [Aphanomyces astac... [more]
XP_008870953.13.100e-1931.27hypothetical protein H310_07347 [Aphanomyces invad... [more]
XP_024582005.14.000e-1932.33atp synthase subunit mitochondrial [Plasmopara hal... [more]
GAX92533.15.200e-1934.98Hypothetical protein PINS_000425 [Pythium insidios... [more]
OWZ03960.14.400e-1831.19hypothetical protein PHMEG_00024223 [Phytophthora ... [more]
XP_009519889.12.400e-1628.91hypothetical protein PHYSODRAFT_284942 [Phytophtho... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL115nonsL115Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR010ncniR010Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR018ngnoR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002191NSK002191Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO11G00810.1NO11G00810.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|590912gene_4952Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100016g59gene5363Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO11G00810.1NO11G00810.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO11G00810 ID=NO11G00810|Name=NO11G00810|organism=Nannochloropsis oceanica|type=gene|length=1882bp
TAAGAGAAAGGCTAAGAGAGCGTGGACTGCATCTCTCTCCGTCATGAAGA
GAAGGCCAGACCGCGTACATCCTCCTCACACCCCAAGGCCTCTCTTCGGT
TTTATCATATTTGAGATTCAAGGTGTTCCTCGGCTACCCGTAACCAGCTC
ATCCATCTTTTCTCTCACCTTCTCACCCACGCATTCAGACTCATGGGGTG
GTCGAGGCCGGGCTTGCGAATGGATGCATCCAATGCCTGAGGGCATATTC
ACAAGCCAAGACTTGCAAAAAGCGCTGGCTCCTCTTATTATCTGGAGATT
AGCCTTTCCCCCGAGGGTCATACTCATGTCCTGTCCCTCGTCCCCAACTA
CAAATACAGGAGAGCGCCCGGTCGTCTTGCCTGCTGTTTGTTAGTTCGAG
TGCAGGCGGTAGTAGCGTCTTCGTACACGTGCACCTCGCCTGCCTATTGC
ATAATGCTCTCTACCCTCTCCCGCCGAGCCGTTCTGGCCTCGGCCCGCTC
CCAACGCGTGCCGCTGGTTGCATCCTTCCACTCAGGTCCTGTACGGCGTG
ATGCCGCCCCCCCGACCGCAGTGGATGACCATGCCCGCAAACCCGCAGAC
GTGACTTTGGAGGGACCTTTAGACCGGTATGGGTTGACAGACTGGAAGCT
GTACGTACCCGTGGGTTTGGCGCTGTCGGTGCCCTTTTTGGCCAATGAGT
GGATCATTCTGAGTGAGGAGACACAGCTGGTGGCGGCCTTTGTGGCGTTC
GGCACCACGGTGTACAAGTACGCCGGTGGGGCCATAGGGCGTAGCTTGGA
TGAACGACAAGATGCGATCATTCAGGAAATCAACAGGTTGGAGGAGCTGG
AACTGAAACTTTACAAGGAGACTATTGATGCTGCCACGATCGAGAAGACG
ATAGTAGAGGACCTGACAGCTTTGGAGGCCAAGAGCGAGGAGATGGCGCA
GAAGCTGGAGGTGGTACTGACGGGTGAGGTGAAGCACCGGATTCGCGAGC
AGTTCGTCCGATGGCTGGACGCGGCGGTGGCGTCGGAGAAGACGGGGAAG
AAGGCCTTGGTGCAATCTTTCCTTGATCAGACCGCTGTCCAGGTCACCAA
GAACTTTGCCTCGGATGCCAAGCTCAAGAAAGCGGCTGTCGAGCAAGTGG
TTGCCATTCTGAAAGACCCTGCGGCTAAGCAGGCTGATTTGGTAGGTGCG
GAGTTTGAGCGTGTGGGGAAGAAATTGTGGGATGACCTTGTGAAGAAGGA
GCTAGCGGGCGTGGCGCCTAAGGAGCATGTGGCGGCACTGACGGCCGAGA
TCAAGGCGATCAAGGCTAAGGGCCCTGCGCTCTCGGAGATGGATTTGGAC
AATGCCGTGCGTGTTTACCACACTGCAATGAAAGGTGGTGTGAAACCGGC
GATGCTTAAGTAGAGAGGAGGAAGGCATGAGGGAGAGAGAGGGGTGGTTG
ATGTGGGAGCTTTTGTTTCTGGGTCGGGGATATAGGTTCTGTGTCTCGGA
GGTGGATTTGGACAATGCCGTGCGTGTTCACCACACTGCAATGAAAGGTG
GTGTGGAACCGGCGATGCTTAAGTAGAGAGGAGGAAGGCATGAGGGAGAG
AGAGGGGTGGTTGATGTGGGAGCTTTTGTTTCTGTGTCGGGGATATAGGG
TGAGGGAGGGATGGGAGGAATAGAAGTGTGTTTTTGGTTCCGTGCGAGGA
GAAAGGGCGTAGCATAGTATTCATTCGTGGTGTAGAGGAAAGAAAGACGA
GATGTGTTGTTTTGTTGCCAAGCCTCATGGTCTGTGTAGGTTGTCGGTTG
CCGTGGCACCAGAAGAGATAAAGAAGGAGCCAAATGAGGCCATCAGAAGA
GAGATGAGATGATGAGCAAAAAAGCTACGAAT
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protein sequence of NO11G00810.1

>NO11G00810.1-protein ID=NO11G00810.1-protein|Name=NO11G00810.1|organism=Nannochloropsis oceanica|type=polypeptide|length=320bp
MLSTLSRRAVLASARSQRVPLVASFHSGPVRRDAAPPTAVDDHARKPADV
TLEGPLDRYGLTDWKLYVPVGLALSVPFLANEWIILSEETQLVAAFVAFG
TTVYKYAGGAIGRSLDERQDAIIQEINRLEELELKLYKETIDAATIEKTI
VEDLTALEAKSEEMAQKLEVVLTGEVKHRIREQFVRWLDAAVASEKTGKK
ALVQSFLDQTAVQVTKNFASDAKLKKAAVEQVVAILKDPAAKQADLVGAE
FERVGKKLWDDLVKKELAGVAPKEHVAALTAEIKAIKAKGPALSEMDLDN
AVRVYHTAMKGGVKPAMLK*
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Synonyms
Publications