NO11G00740, NO11G00740 (gene) Nannochloropsis oceanica

Overview
NameNO11G00740
Unique NameNO11G00740
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3050
Alignment locationchr11:303870..306919 +

Link to JBrowse

Properties
Property NameValue
DescriptionEukaryotic peptide chain release factor subunit 1
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr11genomechr11:303870..306919 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0006415translational termination
GO:0016043cellular component organization
Vocabulary: Molecular Function
TermDefinition
GO:0003747translation release factor activity
GO:0008135translation factor activity, RNA binding
Vocabulary: INTERPRO
TermDefinition
IPR024049Release_factor_eRF1/aRF1_N
IPR029064L30e-like
IPR004403Peptide_chain-rel_eRF1/aRF1
IPR005141eRF1_2
IPR005142eRF1_3
IPR005140eRF1_1_Pelota
Homology
BLAST of NO11G00740 vs. NCBI_GenBank
Match: EWM25096.1 (eukaryotic peptide chain release factor subunit 1 [Nannochloropsis gaditana])

HSP 1 Score: 877.1 bits (2265), Expect = 2.400e-251
Identity = 435/456 (95.39%), Postives = 448/456 (98.25%), Query Frame = 0
Query:    2 STGQQTAEGNRAVDTWKVKKLIKSLQQAKGNGTSMISLITPPRDQISRVNKMLADEYGTATNIKSRTNRLSVLDAITSTQQRLKLYSKVPPNGLVMYCGTIMTDEGKERRITIDFEPFKPINTSLYLCDNKFHTEALGELLEDDDKFGFIIMDGNGSLYGTLQGNTRTVLYKFSVDLPKKHGRGGQSAVRFARLRMEARHNYVRKVAELAVNYFITDNKPNVVGLIMAGSADFKTELQLSDLFDPRLLKVVLKTVDVSYGGENGFNQAIELAAETLGSVKLIQEKRLLQKYFDEISQDTGKYCFMVDDTLKGLELGAVETLIVWEGLETMRYVVRDNSTGEEKVVHVGKEQYANGATGNNTHLRDAKTGRELEVVDKISLVEWFADNYTKFGTQLEFVTNRSQEGNQFCKGFGGVGGLLRWKVDFAEHSEEAYAGGLDGDSDEEGGATEEDYEDPF 458
            S GQQ+A+GNRAVDTWKVKKLIKSLQQAKGNGTSMISLI PPRDQISRVNKMLADEYGTATNIKSRTNRLSVLDAITSTQQRLKLYSKVPPNGLVMYCGTIMTDEGKERRITIDFEPFKPINTSLYLCDNKFHTEALGELLEDDDKFGFIIMDGNGSLYGTLQGNTRTVL+KFSVDLPKKHGRGGQSAVRFARLRMEARHNYVRKVAELAV+YFITDNK NVVGL+MAGSADFKTELQLSDLFDPRLLKVVLKTVDVSYGGENGFNQAIELAAETLGSVKL+QEK+LLQKYFDEISQDTGKYCFMVDDTLKGLELGAVETLIVWEGLETMRYVVRDN+TGEE+V+HVGKEQYANGA+G+NTHLRDAKTGRELEVVDKISLVEWFADNYTKFGTQLEFVTNRSQEGNQFCKGFGGVGGLLRWKVDFAEHSEE YA  +  DSDEEGGATEEDYEDPF
Sbjct:    3 SAGQQSADGNRAVDTWKVKKLIKSLQQAKGNGTSMISLIIPPRDQISRVNKMLADEYGTATNIKSRTNRLSVLDAITSTQQRLKLYSKVPPNGLVMYCGTIMTDEGKERRITIDFEPFKPINTSLYLCDNKFHTEALGELLEDDDKFGFIIMDGNGSLYGTLQGNTRTVLHKFSVDLPKKHGRGGQSAVRFARLRMEARHNYVRKVAELAVHYFITDNKANVVGLVMAGSADFKTELQLSDLFDPRLLKVVLKTVDVSYGGENGFNQAIELAAETLGSVKLVQEKKLLQKYFDEISQDTGKYCFMVDDTLKGLELGAVETLIVWEGLETMRYVVRDNTTGEERVLHVGKEQYANGASGDNTHLRDAKTGRELEVVDKISLVEWFADNYTKFGTQLEFVTNRSQEGNQFCKGFGGVGGLLRWKVDFAEHSEETYA-DMGEDSDEEGGATEEDYEDPF 457          
BLAST of NO11G00740 vs. NCBI_GenBank
Match: CBJ28737.1 (eukaryotic peptide chain release factor 1 [Ectocarpus siliculosus])

HSP 1 Score: 679.9 bits (1753), Expect = 5.600e-192
Identity = 329/426 (77.23%), Postives = 374/426 (87.79%), Query Frame = 0
Query:    9 EGNRAVDTWKVKKLIKSLQQAKGNGTSMISLITPPRDQISRVNKMLADEYGTATNIKSRTNRLSVLDAITSTQQRLKLYSKVPPNGLVMYCGTIMTDEGKERRITIDFEPFKPINTSLYLCDNKFHTEALGELLEDDDKFGFIIMDGNGSLYGTLQGNTRTVLYKFSVDLPKKHGRGGQSAVRFARLRMEARHNYVRKVAELAVNYFITDNKPNVVGLIMAGSADFKTELQLSDLFDPRLLKVVLKTVDVSYGGENGFNQAIELAAETLGSVKLIQEKRLLQKYFDEISQDTGKYCFMVDDTLKGLELGAVETLIVWEGLETMRYVVRDNSTGEEKVVHVGKEQYANGATGNNTHLRDAKTGRELEVVDKISLVEWFADNYTKFGTQLEFVTNRSQEGNQFCKGFGGVGGLLRWKVDFAEHSEEAY 435
            +G+R V+ WKVKKLIKSLQ+A+GNGTSMISL+ PP DQI+RV KMLADEYGTATNIKSR N+LSVL AITSTQQRLKLYS+VPPNGLV+YCGTI+TDEGKE+R+ +DFEPFK INTSLYLCDNKFHTEAL ELL+DD++FGFI+MDGNG+LYGTLQG+TR VL+KFSVDLPKKHGRGGQSA+RFARLR+E RHNYVRKVAE A  +FITDNK N  GL++AGSA+FK ELQ SDLFDPRLLK V+K VDVSYGGE GFNQAIEL+AETLGSVKL+QEKRLLQKYFDEI+QDTGKYCFMVDDTLKGL+LGAVETLIVW+ L+  R  VR+NSTGEEKV+H+  EQ       N+TH  D +TG ELEV DK SLVEW A+NY  FG  LEF+TNRSQEG+QFCKGFGG+GG+LRW+VDFAE  E  Y
Sbjct:   11 QGDRQVEIWKVKKLIKSLQKARGNGTSMISLVIPPGDQIARVGKMLADEYGTATNIKSRVNKLSVLSAITSTQQRLKLYSRVPPNGLVIYCGTIVTDEGKEKRMNLDFEPFKAINTSLYLCDNKFHTEALDELLQDDERFGFIVMDGNGTLYGTLQGSTRDVLHKFSVDLPKKHGRGGQSALRFARLRLEKRHNYVRKVAEFATQFFITDNKCNCAGLVLAGSAEFKNELQGSDLFDPRLLKNVIKMVDVSYGGEAGFNQAIELSAETLGSVKLVQEKRLLQKYFDEINQDTGKYCFMVDDTLKGLDLGAVETLIVWDNLDINRLEVRNNSTGEEKVLHLTPEQ-----ENNDTHFHDTETGVELEVTDKQSLVEWIANNYKNFGAALEFITNRSQEGSQFCKGFGGIGGILRWRVDFAEMDESNY 431          
BLAST of NO11G00740 vs. NCBI_GenBank
Match: XP_009040784.1 (hypothetical protein AURANDRAFT_32373 [Aureococcus anophagefferens] >EGB04531.1 hypothetical protein AURANDRAFT_32373 [Aureococcus anophagefferens])

HSP 1 Score: 666.4 bits (1718), Expect = 6.400e-188
Identity = 325/418 (77.75%), Postives = 369/418 (88.28%), Query Frame = 0
Query:   11 NRAVDTWKVKKLIKSLQQAKGNGTSMISLITPPRDQISRVNKMLADEYGTATNIKSRTNRLSVLDAITSTQQRLKLYSKVPPNGLVMYCGTIMTDEGKERRITIDFEPFKPINTSLYLCDNKFHTEALGELLEDDDKFGFIIMDGNGSLYGTLQGNTRTVLYKFSVDLPKKHGRGGQSAVRFARLRMEARHNYVRKVAELAVNYFITDNKPNVVGLIMAGSADFKTELQLSDLFDPRLLKVVLKTVDVSYGGENGFNQAIELAAETLGSVKLIQEKRLLQKYFDEISQDTGKYCFMVDDTLKGLELGAVETLIVWEGLETMRYVVRDNSTGEEKVVHVGKEQYANGATGNNTHLRDAKTGRELEVVDKISLVEWFADNYTKFGTQLEFVTNRSQEGNQFCKGFGGVGGLLRWKVDFAE 429
            ++ V+ WKVKKL+KSL  A+GNGTSMISL+ PPRDQISRV KMLADEYGTA+NIKSR NRLSVL AITSTQQRLKLYS+VP NGLV+YCGTIMTDEGKERR+ IDFEPFKPINTSLYLCDNKFHTEAL ELLEDDDKFGFIIMDGNGSLYGTLQGN R VL+KFSVDLPKKHGRGGQSA+RFARLRME RHNYVRKVAELAV  FI+ +KPNV GL++AGSADFK+EL  SD+FD RL +VV+KTVDVSYGGE GFNQAIEL+AETLGSVKL+QEKRLLQKYFDEISQDTGKYCFMV+DTLK LELGAVETL+VWE L+  R  +R+++ GE+KV+H+ KEQ A     +  +  DA +G ELEV +K+SLVE+ A+NY  FGT LEFVTNRSQEG+QFC+GFGG+GG+LRW+VDF E
Sbjct:   14 DKQVEIWKVKKLVKSLTLARGNGTSMISLVIPPRDQISRVAKMLADEYGTASNIKSRVNRLSVLGAITSTQQRLKLYSRVPLNGLVVYCGTIMTDEGKERRVNIDFEPFKPINTSLYLCDNKFHTEALDELLEDDDKFGFIIMDGNGSLYGTLQGNNREVLHKFSVDLPKKHGRGGQSALRFARLRMEKRHNYVRKVAELAVQMFISADKPNVAGLVLAGSADFKSELHTSDMFDQRLARVVIKTVDVSYGGEIGFNQAIELSAETLGSVKLVQEKRLLQKYFDEISQDTGKYCFMVEDTLKALELGAVETLVVWENLDIDRLTLRNHAAGEDKVLHLSKEQQA-----HEEYFHDAASGVELEVTEKVSLVEFLANNYKSFGTTLEFVTNRSQEGSQFCRGFGGIGGILRWRVDFLE 426          
BLAST of NO11G00740 vs. NCBI_GenBank
Match: EXX75906.1 (hypothetical protein RirG_037880 [Rhizophagus irregularis DAOM 197198w] >GBC48581.1 Peptide chain release factor subunit 1 [Rhizophagus irregularis DAOM 181602] >POG69992.1 peptide chain release factor eRF1/aRF1 [Rhizophagus irregularis DAOM 181602=DAOM 197198])

HSP 1 Score: 635.6 bits (1638), Expect = 1.200e-178
Identity = 319/436 (73.17%), Postives = 369/436 (84.63%), Query Frame = 0
Query:   11 NRAVDTWKVKKLIKSLQQAKGNGTSMISLITPPRDQISRVNKMLADEYGTATNIKSRTNRLSVLDAITSTQQRLKLYSKVPPNGLVMYCGTIMTDEGKERRITIDFEPFKPINTSLYLCDNKFHTEALGELLEDDDKFGFIIMDGNGSLYGTLQGNTRTVLYKFSVDLPKKHGRGGQSAVRFARLRMEARHNYVRKVAELAVNYFITDNKPNVVGLIMAGSADFKTELQLSDLFDPRLLKVVLKTVDVSYGGENGFNQAIELAAETLGSVKLIQEKRLLQKYFDEISQDTGKYCFMVDDTLKGLELGAVETLIVWEGLETMRYVVRDNSTGEEKVVHVGKEQYANGATGNNTHLRDAKTGRELEVVDKISLVEWFADNYTKFGTQLEFVTNRSQEGNQFCKGFGGVGGLLRWKVDFAEHSEEAYAGGLDGDSDEEG 447
            +R V+ WKVKKLIKSL+ A+GNGTSMISLI PP+DQISR+ KMLADEYGTA+NIKSR NRLSVL AITSTQQRLKLY+KVP NGLV+YCGTI+T+EGKE+++ IDFEPFKPINTSLYLCDNKFHTEAL ELLE D+KFGFI+MDGNG+L+GTL GNTR V++KF+V+LPKKHGRGGQSA+RFARLR E RHNYVRKVAELAV ++IT++K NV GLI+AGSADFKTEL  SD+FD RL   V+K VDVSYGGENGFNQAIELAAE+L +VK IQEK+L+QKYFDEISQDTGKYCF VDDTLKGLELGAVETLIVWE L+T RYV++ NS G E VVH+ KEQ  + A        D +TG E+EVVD+  L+EWFAD+Y  FG  LEFVTNRSQEG+QF KGFGG+GGLLR+KVDF           L+ DS+E+G
Sbjct:   12 DRNVEIWKVKKLIKSLEAARGNGTSMISLIIPPKDQISRIAKMLADEYGTASNIKSRVNRLSVLAAITSTQQRLKLYTKVPTNGLVVYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCDNKFHTEALSELLESDNKFGFIVMDGNGALFGTLSGNTREVIHKFAVELPKKHGRGGQSALRFARLREEKRHNYVRKVAELAVQFYITNDKVNVTGLILAGSADFKTELSQSDMFDNRLQTKVIKLVDVSYGGENGFNQAIELAAESLANVKFIQEKKLIQKYFDEISQDTGKYCFGVDDTLKGLELGAVETLIVWENLDTTRYVLK-NSAGSEVVVHMTKEQEKDRAL-----YTDKETGSEMEVVDRTPLLEWFADHYKDFGANLEFVTNRSQEGSQFVKGFGGIGGLLRYKVDF---------DTLNYDSEEDG 432          
BLAST of NO11G00740 vs. NCBI_GenBank
Match: PKC15082.1 (peptide chain release factor eRF/aRF, subunit 1 [Rhizophagus irregularis] >PKC71413.1 peptide chain release factor eRF/aRF, subunit 1 [Rhizophagus irregularis] >PKK78507.1 peptide chain release factor eRF/aRF, subunit 1 [Rhizophagus irregularis] >PKY16471.1 peptide chain release factor eRF/aRF, subunit 1 [Rhizophagus irregularis])

HSP 1 Score: 635.6 bits (1638), Expect = 1.200e-178
Identity = 319/436 (73.17%), Postives = 369/436 (84.63%), Query Frame = 0
Query:   11 NRAVDTWKVKKLIKSLQQAKGNGTSMISLITPPRDQISRVNKMLADEYGTATNIKSRTNRLSVLDAITSTQQRLKLYSKVPPNGLVMYCGTIMTDEGKERRITIDFEPFKPINTSLYLCDNKFHTEALGELLEDDDKFGFIIMDGNGSLYGTLQGNTRTVLYKFSVDLPKKHGRGGQSAVRFARLRMEARHNYVRKVAELAVNYFITDNKPNVVGLIMAGSADFKTELQLSDLFDPRLLKVVLKTVDVSYGGENGFNQAIELAAETLGSVKLIQEKRLLQKYFDEISQDTGKYCFMVDDTLKGLELGAVETLIVWEGLETMRYVVRDNSTGEEKVVHVGKEQYANGATGNNTHLRDAKTGRELEVVDKISLVEWFADNYTKFGTQLEFVTNRSQEGNQFCKGFGGVGGLLRWKVDFAEHSEEAYAGGLDGDSDEEG 447
            +R V+ WKVKKLIKSL+ A+GNGTSMISLI PP+DQISR+ KMLADEYGTA+NIKSR NRLSVL AITSTQQRLKLY+KVP NGLV+YCGTI+T+EGKE+++ IDFEPFKPINTSLYLCDNKFHTEAL ELLE D+KFGFI+MDGNG+L+GTL GNTR V++KF+V+LPKKHGRGGQSA+RFARLR E RHNYVRKVAELAV ++IT++K NV GLI+AGSADFKTEL  SD+FD RL   V+K VDVSYGGENGFNQAIELAAE+L +VK IQEK+L+QKYFDEISQDTGKYCF VDDTLKGLELGAVETLIVWE L+T RYV++ NS G E VVH+ KEQ  + A        D +TG E+EVVD+  L+EWFAD+Y  FG  LEFVTNRSQEG+QF KGFGG+GGLLR+KVDF           L+ DS+E+G
Sbjct:   12 DRNVEIWKVKKLIKSLEAARGNGTSMISLIIPPKDQISRIAKMLADEYGTASNIKSRVNRLSVLAAITSTQQRLKLYTKVPTNGLVVYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCDNKFHTEALSELLESDNKFGFIVMDGNGALFGTLSGNTREVIHKFAVELPKKHGRGGQSALRFARLREEKRHNYVRKVAELAVQFYITNDKVNVTGLILAGSADFKTELSQSDMFDNRLQTKVIKLVDVSYGGENGFNQAIELAAESLANVKFIQEKKLIQKYFDEISQDTGKYCFGVDDTLKGLELGAVETLIVWENLDTTRYVLK-NSAGSEVVVHMTKEQEKDRAL-----YTDKETGSEMEVVDRTPLLEWFADHYKDFGANLEFVTNRSQEGSQFVKGFGGIGGLLRYKVDF---------DTLNYDSEEDG 432          
BLAST of NO11G00740 vs. NCBI_GenBank
Match: PKY47752.1 (peptide chain release factor eRF/aRF, subunit 1 [Rhizophagus irregularis])

HSP 1 Score: 633.6 bits (1633), Expect = 4.600e-178
Identity = 318/436 (72.94%), Postives = 369/436 (84.63%), Query Frame = 0
Query:   11 NRAVDTWKVKKLIKSLQQAKGNGTSMISLITPPRDQISRVNKMLADEYGTATNIKSRTNRLSVLDAITSTQQRLKLYSKVPPNGLVMYCGTIMTDEGKERRITIDFEPFKPINTSLYLCDNKFHTEALGELLEDDDKFGFIIMDGNGSLYGTLQGNTRTVLYKFSVDLPKKHGRGGQSAVRFARLRMEARHNYVRKVAELAVNYFITDNKPNVVGLIMAGSADFKTELQLSDLFDPRLLKVVLKTVDVSYGGENGFNQAIELAAETLGSVKLIQEKRLLQKYFDEISQDTGKYCFMVDDTLKGLELGAVETLIVWEGLETMRYVVRDNSTGEEKVVHVGKEQYANGATGNNTHLRDAKTGRELEVVDKISLVEWFADNYTKFGTQLEFVTNRSQEGNQFCKGFGGVGGLLRWKVDFAEHSEEAYAGGLDGDSDEEG 447
            +R V+ WKVKKLIKSL+ A+GNGTSMISLI PP+DQISR+ KMLADEYGTA+NIKSR NRLSVL AITSTQQRLKLY+KVP NGLV+YCGTI+T+EGKE+++ IDFEPFKPINTSLYLCDNKFHTEAL ELLE D+KFGFI+MDGNG+L+GTL GNTR V++KF+V+LPKKHGRGGQSA+RFARLR E RHNYVRKVAELAV ++IT++K NV GLI+AGSADFKTEL  SD+FD RL   V+K VDVSYGGENGFNQAIELAAE+L +VK IQEK+L+QKYFDEISQDTGK+CF VDDTLKGLELGAVETLIVWE L+T RYV++ NS G E VVH+ KEQ  + A        D +TG E+EVVD+  L+EWFAD+Y  FG  LEFVTNRSQEG+QF KGFGG+GGLLR+KVDF           L+ DS+E+G
Sbjct:   12 DRNVEIWKVKKLIKSLEAARGNGTSMISLIIPPKDQISRIAKMLADEYGTASNIKSRVNRLSVLAAITSTQQRLKLYTKVPTNGLVVYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCDNKFHTEALSELLESDNKFGFIVMDGNGALFGTLSGNTREVIHKFAVELPKKHGRGGQSALRFARLREEKRHNYVRKVAELAVQFYITNDKVNVTGLILAGSADFKTELSQSDMFDNRLQTKVIKLVDVSYGGENGFNQAIELAAESLANVKFIQEKKLIQKYFDEISQDTGKFCFGVDDTLKGLELGAVETLIVWENLDTTRYVLK-NSAGSEVVVHMTKEQEKDRAL-----YTDKETGLEMEVVDRTPLLEWFADHYKDFGANLEFVTNRSQEGSQFVKGFGGIGGLLRYKVDF---------DTLNYDSEEDG 432          
BLAST of NO11G00740 vs. NCBI_GenBank
Match: XP_019615145.1 (PREDICTED: eukaryotic peptide chain release factor subunit 1 [Branchiostoma belcheri])

HSP 1 Score: 630.6 bits (1625), Expect = 3.900e-177
Identity = 304/424 (71.70%), Postives = 362/424 (85.38%), Query Frame = 0
Query:    3 TGQQTAEGNRAVDTWKVKKLIKSLQQAKGNGTSMISLITPPRDQISRVNKMLADEYGTATNIKSRTNRLSVLDAITSTQQRLKLYSKVPPNGLVMYCGTIMTDEGKERRITIDFEPFKPINTSLYLCDNKFHTEALGELLEDDDKFGFIIMDGNGSLYGTLQGNTRTVLYKFSVDLPKKHGRGGQSAVRFARLRMEARHNYVRKVAELAVNYFITDNKPNVVGLIMAGSADFKTELQLSDLFDPRLLKVVLKTVDVSYGGENGFNQAIELAAETLGSVKLIQEKRLLQKYFDEISQDTGKYCFMVDDTLKGLELGAVETLIVWEGLETMRYVVRDNSTGEEKVVHVGKEQYANGATGNNTHLRDAKTGRELEVVDKISLVEWFADNYTKFGTQLEFVTNRSQEGNQFCKGFGGVGGLLRWKVDF 427
            +G  + + +R V+ WK+KKLIKSL+ A+GNGTSMISLI PP+DQISRV+KMLADE+GTA+NIKSR NRLSVL AITS QQRLKLYSKVPPNGLV+YCGTI+TDEGKE+++ IDFEPFKPINTSLYLCDNKFHTEAL  LL DD+KFGFI+MDGNG+L+GTL GNTR VL+KF+VDLPKKHGRGGQSA+RFARLRME RHNYVRKVAE+A   FIT++KPN+ GLI+AGSADFKTEL  SD+FD RL   VLK VDVSYGGENGFNQAIEL+AE L +VK IQEK+L+ KYFDEISQDTGKYCF VDDTLK LE+GAVETLIVWE L+  RYV++D+   EEK++++  EQ       + T+  D  TG ELE+++ + L+EWFA+NY KFG  LE +T+RSQEG+QFCKGFGG+GG+LR++VDF
Sbjct:    2 SGDSSDQADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIKSRVNRLSVLAAITSVQQRLKLYSKVPPNGLVVYCGTIVTDEGKEKKVNIDFEPFKPINTSLYLCDNKFHTEALSALLTDDNKFGFIVMDGNGALFGTLCGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKVAEVATQLFITNDKPNITGLILAGSADFKTELSQSDMFDQRLQVKVLKLVDVSYGGENGFNQAIELSAEVLSNVKFIQEKKLIGKYFDEISQDTGKYCFGVDDTLKALEMGAVETLIVWENLDYTRYVLKDHQKDEEKLLYLRPEQ-----EKDKTYFTDKDTGVELELMESMPLLEWFANNYKKFGATLEIITDRSQEGSQFCKGFGGIGGILRYRVDF 420          
BLAST of NO11G00740 vs. NCBI_GenBank
Match: XP_013774450.1 (eukaryotic peptide chain release factor subunit 1 isoform X1 [Limulus polyphemus])

HSP 1 Score: 629.0 bits (1621), Expect = 1.100e-176
Identity = 304/426 (71.36%), Postives = 362/426 (84.98%), Query Frame = 0
Query:    1 MSTGQQTAEGNRAVDTWKVKKLIKSLQQAKGNGTSMISLITPPRDQISRVNKMLADEYGTATNIKSRTNRLSVLDAITSTQQRLKLYSKVPPNGLVMYCGTIMTDEGKERRITIDFEPFKPINTSLYLCDNKFHTEALGELLEDDDKFGFIIMDGNGSLYGTLQGNTRTVLYKFSVDLPKKHGRGGQSAVRFARLRMEARHNYVRKVAELAVNYFITDNKPNVVGLIMAGSADFKTELQLSDLFDPRLLKVVLKTVDVSYGGENGFNQAIELAAETLGSVKLIQEKRLLQKYFDEISQDTGKYCFMVDDTLKGLELGAVETLIVWEGLETMRYVVRDNSTGEEKVVHVGKEQYANGATGNNTHLRDAKTGRELEVVDKISLVEWFADNYTKFGTQLEFVTNRSQEGNQFCKGFGGVGGLLRWKVDF 427
            M    + +  +R V+ WKVKKLIKSL+ A+GNGTSMISLI PP+DQISRV+KMLADE+GTA+NIKSR NRLSVL AITS QQRLKLY+KVPPNGLV+YCGTI+T+EGKE+++ IDFEPFKPINTSLYLCDNKFHTEAL  LL DD+KFGFI+MDGNG+L+GTLQGNTR VL+KF+VDLPKKHGRGGQSA+RFARLRME RHNYVRKVAE+A   FIT++KPN+ GLI+AGSADFKTEL  SD+FDPRL   VLK VDVSYGGENGFNQAIEL+AE L +VK IQEK+L+ +YFDEISQDTGKYCF V+DTLK LE+G+VE LI WE LE  R+V++++++ EEKV+H+  EQ       + TH  D +TG ELE+VD I L+EW A+NY  FGT LE +T+RSQEG+QF KGFGG+GGLLR++VDF
Sbjct:    1 MVVNMEDSSADRNVEVWKVKKLIKSLEAARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCDNKFHTEALSALLADDNKFGFIVMDGNGALFGTLQGNTRDVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKVAEVATQLFITNDKPNIAGLILAGSADFKTELSQSDMFDPRLQAKVLKLVDVSYGGENGFNQAIELSAEVLANVKFIQEKKLIGRYFDEISQDTGKYCFGVEDTLKALEMGSVEILICWENLEINRFVLKNHASEEEKVLHLTPEQ-----EKDKTHFVDKETGVELELVDSIPLLEWLANNYKSFGTTLEIITDRSQEGSQFVKGFGGIGGLLRYRVDF 421          
BLAST of NO11G00740 vs. NCBI_GenBank
Match: Q9GR88.1 (RecName: Full=Eukaryotic peptide chain release factor subunit 1; Short=Eukaryotic release factor 1; Short=eRF1 >BAB20047.1 putative eukaryotic petide chain release factor subunit 1 [Polyandrocarpa misakiensis])

HSP 1 Score: 629.0 bits (1621), Expect = 1.100e-176
Identity = 304/426 (71.36%), Postives = 365/426 (85.68%), Query Frame = 0
Query:    1 MSTGQQTAEGNRAVDTWKVKKLIKSLQQAKGNGTSMISLITPPRDQISRVNKMLADEYGTATNIKSRTNRLSVLDAITSTQQRLKLYSKVPPNGLVMYCGTIMTDEGKERRITIDFEPFKPINTSLYLCDNKFHTEALGELLEDDDKFGFIIMDGNGSLYGTLQGNTRTVLYKFSVDLPKKHGRGGQSAVRFARLRMEARHNYVRKVAELAVNYFITDNKPNVVGLIMAGSADFKTELQLSDLFDPRLLKVVLKTVDVSYGGENGFNQAIELAAETLGSVKLIQEKRLLQKYFDEISQDTGKYCFMVDDTLKGLELGAVETLIVWEGLETMRYVVRDNSTGEEKVVHVGKEQYANGATGNNTHLRDAKTGRELEVVDKISLVEWFADNYTKFGTQLEFVTNRSQEGNQFCKGFGGVGGLLRWKVDF 427
            M+  + TA+ N  V+ WK+KKLIKSL+ A+GNGTSMISLI PP+DQ+SRV KMLADE+GTA+NIKSR NRLSVL AITS QQRLKLY+KVPPNGLV+YCGTI+TDEGKE+++ IDFEPFKPINTSLYLCDNKFHTEAL  LL DD+KFGFI+MDGNG+L+GTLQGNTR VL+KF+VDLPKKHGRGGQSA+RFARLRME RHNYVRKVAE AV  FIT+++PNV GL++AGSADFKTEL  SD+FD RL   +LK VDVSYGGENGFNQAIEL+AE L +VK IQEK+L+ +YFDEISQDTGKYCF VDDTLK LE+GAVE LIVWE L+TMRYV+++++T EEK++ +  +Q       + TH  D  TG E+E+V+  SL+EWFA+NY KFG+ LE VT+RSQEG+QF KGFGG+GG+LR+++DF
Sbjct:    1 MAETETTADRN--VEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQVSRVAKMLADEFGTASNIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTDEGKEKKVNIDFEPFKPINTSLYLCDNKFHTEALTALLSDDNKFGFIVMDGNGALFGTLQGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKVAETAVQLFITNDRPNVTGLVLAGSADFKTELSQSDMFDQRLQVKILKLVDVSYGGENGFNQAIELSAEVLSNVKFIQEKKLIGRYFDEISQDTGKYCFGVDDTLKALEMGAVEILIVWENLDTMRYVLKNHTTDEEKILFLKPDQ-----EKDKTHFTDKDTGVEMEMVESCSLLEWFANNYKKFGSTLEIVTDRSQEGSQFVKGFGGIGGMLRYRIDF 419          
BLAST of NO11G00740 vs. NCBI_GenBank
Match: XP_022086643.1 (eukaryotic peptide chain release factor subunit 1 isoform X1 [Acanthaster planci])

HSP 1 Score: 628.6 bits (1620), Expect = 1.500e-176
Identity = 305/428 (71.26%), Postives = 364/428 (85.05%), Query Frame = 0
Query:    1 MSTGQQTAEGNRAVDTWKVKKLIKSLQQAKGNGTSMISLITPPRDQISRVNKMLADEYGTATNIKSRTNRLSVLDAITSTQQRLKLYSKVPPNGLVMYCGTIMTDEGKERRITIDFEPFKPINTSLYLCDNKFHTEALGELLEDDDKFGFIIMDGNGSLYGTLQGNTRTVLYKFSVDLPKKHGRGGQSAVRFARLRMEARHNYVRKVAELAVNYFITDNKPNVVGLIMAGSADFKTELQLSDLFDPRLLKVVLKTVDVSYGGENGFNQAIELAAETLGSVKLIQEKRLLQKYFDEISQDTGKYCFMVDDTLKGLELGAVETLIVWEGLETMRYVVRDNSTGEEKVVHVGKEQYANGATGNNTHLRDAKTGRELEVVDKISLVEWFADNYTKFGTQLEFVTNRSQEGNQFCKGFGGVGGLLRWKVDFAE 429
            MS+  +TA  +R V+ WK+KKLIKSLQ A+GNGTSMISLI PP+DQISRV KMLADE+GTA+NIKSR NRLSVL AITS QQRLKLYSKVPPNGLV+YCGTI+TD+GKE+++ IDFEPF+PINTSLYLCDNKFHTEAL  LL DD+KFGFI+MDGNG+L+GTL GNTR VL+KFSVDLPKKHGRGGQSA+RFARLRME RHNYVRKVAE+AV  +IT++KPN+ GLI+AGSADFKTEL  SD+FDPRL   VLK VDVSYGGENGFNQAIEL+ E LG+VK IQEK+L+ KYFDEISQDTGKYCF V DTLK LE+G+VE LIVWE L+  R++++++S  EEKV+H+ +EQ       + T+  D  TG ELE+V+   L+EW A+NY  FG+ LE +T+RSQEG+QFCKGFGG+GG+LR++VDF E
Sbjct:    1 MSSNDETA-ADRNVEIWKIKKLIKSLQAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIKSRVNRLSVLSAITSVQQRLKLYSKVPPNGLVIYCGTIVTDDGKEKKVNIDFEPFRPINTSLYLCDNKFHTEALTALLADDNKFGFIVMDGNGALFGTLSGNTREVLHKFSVDLPKKHGRGGQSALRFARLRMEKRHNYVRKVAEVAVTLYITNDKPNIAGLILAGSADFKTELSQSDMFDPRLQTKVLKLVDVSYGGENGFNQAIELSTEVLGNVKFIQEKKLIGKYFDEISQDTGKYCFGVTDTLKALEMGSVEILIVWENLDIQRFLLKNHSADEEKVLHLTQEQ-----ERDKTYFMDKDTGVELELVESQPLLEWLANNYKTFGSTLEIITDRSQEGSQFCKGFGGIGGILRYRVDFQE 422          
The following BLAST results are available for this feature:
BLAST of NO11G00740 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM25096.12.400e-25195.39eukaryotic peptide chain release factor subunit 1 ... [more]
CBJ28737.15.600e-19277.23eukaryotic peptide chain release factor 1 [Ectocar... [more]
XP_009040784.16.400e-18877.75hypothetical protein AURANDRAFT_32373 [Aureococcus... [more]
EXX75906.11.200e-17873.17hypothetical protein RirG_037880 [Rhizophagus irre... [more]
PKC15082.11.200e-17873.17peptide chain release factor eRF/aRF, subunit 1 [R... [more]
PKY47752.14.600e-17872.94peptide chain release factor eRF/aRF, subunit 1 [R... [more]
XP_019615145.13.900e-17771.70PREDICTED: eukaryotic peptide chain release factor... [more]
XP_013774450.11.100e-17671.36eukaryotic peptide chain release factor subunit 1 ... [more]
Q9GR88.11.100e-17671.36RecName: Full=Eukaryotic peptide chain release fac... [more]
XP_022086643.11.500e-17671.26eukaryotic peptide chain release factor subunit 1 ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL115nonsL115Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR010ncniR010Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR018ngnoR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002198NSK002198Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO11G00740.1NO11G00740.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|630664gene_4943Nannochloropsis oceanica (N. oceanica CCMP1779)gene
eRF1gene5355Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO11G00740.1NO11G00740.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO11G00740 ID=NO11G00740|Name=NO11G00740|organism=Nannochloropsis oceanica|type=gene|length=3050bp
GCCTGTTTTGTCGTGATACAGGGAAAAGCGTGTGAGTGCGAGCGGTAAGG
TCAAGGAAAGGTGGGCATAAAGAGAGGGCATAGAAAACGCTGAGAAAAAG
AGATTGAATGAATGCCCAGGCGCTGCTTCGCGCCATCTGGAGCAAACTTC
GAGGAACTTCGCACTCACGGCTACGATTCCCAAAGCTACAGATGAACCCT
CTACGCAACCACCCCGAGATTGTTGAGGGCTTTGGCTGACATTATGTGAA
GTCTTGTGAGTTGTCGAGTGCAAGACAAAGACAAGCGGGTGTTGGGCGTG
TTGGCGAGGCGGCGATAAGGTGCCAAATCCCCCGGAGTCCCCGACCACTC
AAACTCACAAGTGCCACTATTTTTGCTTTCCATTTTGACCTTCATGACAC
CTCTCACCACAGTTCCACCACCGGCAAGAGAAGGCCGGTGGTAGTTTGGC
ATGCACTATTTGCATGTCTCCCCTTCCTTTCTGTCATTCACGTTTCGAGC
CAGCTCCACTAGCGTCCTCATCTGCTCCTTTTTCTTCTTCATTCCTCTTG
CAGGGCTATTGCACGTATCAATCCCCTTTTTCGAGGCCGCCTTGCATTAA
CAGCAACAGGAGGATCATATCAACACACGTTTCACTAGCTTAGCTACTGG
CGCCATCACAACTCCATCATCTAGCAGCTGGCACCACTCGTCCCACTTTA
CTCCACAGAGCTTATCAGCACCAGCACCAAGCAGTCAGTCAGTCACCATG
TCCACCGGCCAACAAACCGCCGAGGGCAATCGCGCCGTCGATACCTGGAA
GGTGAAGAAGCTCATCAAGTCATTGCAACAGGCGAAAGGgtaagttgtgt
ggaaaggtgaacaagggaagggcgtcgtttgggcgtcaaaggggtatgag
ggaaagggccaaaaggtgtgcgcgcgagcgttcaaagatacacgtagatg
gcattaggttctcgggaaaaacacacagaatacttgaatgtggtcatttt
tccatctggtgtacctcagctatcattaaccaagttcgccactaacctct
ttcgcgctcctccctcctccctcctccctccccttcctagCAACGGCACC
TCCATGATCTCCCTCATCACCCCTCCCCGGGATCAAATCTCGCGGGTTAA
CAAGATGCTTGCCGACGAGTACGGCACAGCCACCAATATCAAGTCCCGCA
CCAACCGTCTCTCCGTGCTCGACGCCATCACCTCCACCCAGCAACGCCTG
AAGCTCTACAGCAAGGTGCCCCCTAACGGCCTGGTCATGTATTGCGGGAC
GATCATGACCGACGAGGGGAAAGAACGTCGCATCACCATTGATTTCGAGC
CCTTCAAACCCATCAATACCTCCCTTTATTTGTGTGACAATAAGTTCCAC
ACCGAGGCCCTGGGGGAGCTCTTGGAAGACGACGACAAGTTTGGGTTCAT
CATCATGGACGGCAACGGTTCGCTTTACGGCACCTTGCAGGGCAACACCC
GCACGGTCTTATACAAATTCTCGGTGGACCTTCCCAAGAAGCACGGGAGG
GGGGGGCAGTCCGCCGTCCGTTTCGCGCGGCTCCGCATGGAGGCCAGGCA
TAACTACGTGAGAAAGGTGGCGGAGTTGGCGGTGAATTATTTCATTACGG
ACAACAAGCCGAATGTCGTGGGGTTGATCATGGCGGGGTCAGCTGACTTC
AAAACAGAGCTACAGTTGTCGGATTTGTTCGACCCGCGTTTGCTCAAGgt
acgttcggtttttcctttcgacttcttttcctccccgttcctttcctccg
tcccttccttgctgagacattgggagtgtggagatatgttcaattgaaat
gtattgcctgcgcgcttacttaccgcatgcatccgtcttctctcctctct
ctccctccctccatcccttcctccctttctcttacaagGTGGTCCTCAAG
ACAGTGGACGTGTCCTACGGGGGTGAAAACGGGTTCAACCAGGCCATCGA
GCTGGCGGCCGAGACGCTAGGTTCGGTGAAGCTCATCCAGGAGAAGCGGT
TGTTACAGAAGTATTTCGACGAAATAAGTCAGgtaggtgatattggtata
ttgcttcgttggtcggcttggtttgcttgtgtgtcgggggccaacggagg
aagaggagtgccttgcgggctgagattgacatgcttatgatcctccacct
ccgttgagctaagtattaacccagttttttcattttctgtccattcttct
ctccgtctctccatcccctcgttcagGACACGGGCAAGTACTGCTTTATG
GTCGACGACACCCTCAAGGGCCTTGAATTGGGTGCAGTTGAGACTTTGAT
CGTCTGGGAAGGGCTGGAAACGATGCGGTATGTTGTGCGGGATAACAGCA
CGGGGGAGGAAAAGGTTGTGCATGTCGGCAAGGAGCAGTATGCGAATGGT
GCCACGGGGAACAACACGCATTTGAGGGATGCCAAGACGGGGAGGGAGCT
GGAGGTGGTAGATAAGATTTCGCTGGTTGAGTGGTTTGCGGACAATTACA
CGAAGTTTGGGACACAGTTAGAGTTTGTGACGAATCGTTCGCAGGAGGGG
AACCAGTTTTGTAAGGGCTTTGGGGGGGTGGGCGGGTTGTTGCGGTGGAA
GGTGGACTTTGCAGAGCATAGTGAAGAGGCCTACGCGGGGGGTTTGGATG
GGGATTCGGATGAGGAGGGAGGAGCGACGGAGGAGGATTATGAGGATCCA
TTTTAAGTTAGGGATGTTGTGTGGGCTTGTGGCAAAATGTAGAACTAGAA
AAGCAGAAAAGAAATGTGAAAGGGGGGGGCGTTAGGGTAAAAATAAGAAG
CGTGCATGCAAAATTTGGCGCGAGGCGGTAAGTGCTTTTAATAGAGACAT
CTAACTGCCTGCTTTGCGAAAAAAAATGGCGACAACGTAGATGATACGGA
CAAAGACAATATCGATCATGCAGCAACAGCGAGTTATGGAAAGTCACGGG
ATCTCTCGAAAAAGAAGAAAGCCACAAGGACAAAGAAAATTTCAACGGTT
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protein sequence of NO11G00740.1

>NO11G00740.1-protein ID=NO11G00740.1-protein|Name=NO11G00740.1|organism=Nannochloropsis oceanica|type=polypeptide|length=458bp
MSTGQQTAEGNRAVDTWKVKKLIKSLQQAKGNGTSMISLITPPRDQISRV
NKMLADEYGTATNIKSRTNRLSVLDAITSTQQRLKLYSKVPPNGLVMYCG
TIMTDEGKERRITIDFEPFKPINTSLYLCDNKFHTEALGELLEDDDKFGF
IIMDGNGSLYGTLQGNTRTVLYKFSVDLPKKHGRGGQSAVRFARLRMEAR
HNYVRKVAELAVNYFITDNKPNVVGLIMAGSADFKTELQLSDLFDPRLLK
VVLKTVDVSYGGENGFNQAIELAAETLGSVKLIQEKRLLQKYFDEISQDT
GKYCFMVDDTLKGLELGAVETLIVWEGLETMRYVVRDNSTGEEKVVHVGK
EQYANGATGNNTHLRDAKTGRELEVVDKISLVEWFADNYTKFGTQLEFVT
NRSQEGNQFCKGFGGVGGLLRWKVDFAEHSEEAYAGGLDGDSDEEGGATE
EDYEDPF*
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Synonyms
Publications