NO11G00720, NO11G00720 (gene) Nannochloropsis oceanica

Overview
NameNO11G00720
Unique NameNO11G00720
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4773
Alignment locationchr11:293613..298385 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr11genomechr11:293613..298385 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO11G00720 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL115nonsL115Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR010ncniR010Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR018ngnoR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO11G00720.1NO11G00720.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO11G00720.1NO11G00720.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO11G00720 ID=NO11G00720|Name=NO11G00720|organism=Nannochloropsis oceanica|type=gene|length=4773bp
ATCCATTACTTTATCACTCTATGTATACCCTTCCCTTCTCAATGTTACTC
TGTTGGAACTGGTAAGTCATATCGAATGGGCCCTCATTACCTACACGCTC
ATCTTGGCAACAGGCTCCGTATGATCAGCTAAATTTCTGTTCCCCGAACA
GAAATTTAGCTGATCATATTTAAAAAAATGCTGAAGTCACCCTCTGAACG
GAGGATAGGACGGTGAATCTGTACTGGTTGTCGTTTCGAGCAGCAGCGAC
ATGGTGGAGGGAAGACGTGGGGACAACCCCAATGGTCTCCTCCCCTTTTT
CTCTTTTTTCTCTGGATGATGTTCCCAAAAGTGAAATACCCTTGAGAAAG
ACGGCATTGAAAACCCCAAACCAGCACTGGCCCTTCCTTACTCCCCCCAT
TCCCTTCTTTCTATCTTACCCTTCTTATGCCGTCCCTTTCCTCCTATGTG
TTCCTCTGCTGAGTGTGTTCCTCTGCTCCCTGTATACTCTCGCCCCGTCC
GTCGTCCGTCCCTTCTCTCTCACCCCGTTCCTTATTCCACGCATGCATGG
TAACAAAGTATTTGCGTTGTAGCTCGGGACCGTCACCGTGCCGTTGCTCC
AACGAAGTCGTCTGTGACCGCTGCATATTCCTTTTTTGTTCTTGCGTGAT
TCATGTGGCCGAAGGCTTGGACAATACTGTCTGCCCTGCACTTGTGTTCT
CGGGCTTATTGCACAACGGCTTGTTGGCGTTGTTTGAAAAAGTACAGTGC
ATTTTCCTCATCGTCGCGCCACATTGGAACTTATCAGACGGCACAAAATG
GCACAAAATCCCCATGTATAACGCTGCGAGGCCCTAAAAAATTTTTGGAA
CAGCTCAACGACAATTCTTCCCCCCGTATGGCTTCTTCGGTTGAGGAGCC
TACGAAAGAGCACTCGCTCTGACGAAGCTCCTCCGGAGACATCCGCTCTG
CACGCTTGGAGGCGCTGTGCGTTTCGGTTTGTATTTCCCCTACTGCTTTG
GGTGCCACCAACACTCGCAATTCTTCTCTCCGACTTGAAAAGCTGCAGGA
GCTTGTCGAAGACGATACCTGGGATGTGTGCTGCCACGTTGAGCTCGCAT
GAGTGAGGAGGGGGTCGGTCGCCCCCGCTTCTCCCTCCCATACTATTATC
TTTTTGCATAGCAAACATTCCCCCACTCGTATAGACAGGTAGGGAAGCGG
ATGGCTATGGTCTCACTGGGGCTCTTGGCTCTTGGGAAGCATTATTCTCA
CGTGAACTTGTTGATGCTGCCTGCCACTCCCACCCGCAGTTCCGAACAAG
TGATGCAGTTGCAACCCGAGAAACGCACCAATACTTATCTTTTTCTTACA
TCTCACTAGCACATCATTCTCGAAGCGTTAGGGAAGCAAGCACTTCCAAT
GAACAGCAGCAAGGATATGGAGAAGAGCCAACCAAGGGCCGTCGAGATCA
AGAAAAAGAATACTTTTGCTAAGgtaataggtgccctgacatgaaccacg
catgtgctattttttccggtgtatccgcttgtctcatctccatccccccc
cttcccattctcctgaatagCGTCGCAAGGTCACATGGGGCGAAAACGTG
GATCAGTACGACAATGACCAAGTGGAACCCCAATCTCCCTTGACTGCCCT
CGCCCTCTCCGAAGTTGCCCAATGCCATCCCATAATGGCCAGCGAACTCA
TTGCCCGGGCATGTGTTGGCTTGATCGAAGCAGGGAACGCGCATATAGCA
CGCATTCGAGCTTCCATgtgagtactctgttgtttaaagttgagggttca
cgctgtcgtgattcctgtctcccaaagtcttccctccttttctaacttct
aagaagttgaacagaatgttttaaggcatctctacctcattgtctccctc
atgatctgatcatcactttgcatttcactctgtcattgactcgctcacgc
gctgttactcacacgcacacgtacccacgcacttacctacagGCAGGTGA
TGGAAGAATACAAGAAAGTGTTTTTCGTTGACTGCTCCTGGGGTCTACTC
GACCGGCTACGGGATGTCCTGTCCTCAATAGAGGTAAGGGGCCTGAAAAG
CTACACTCAGAAACAGCAGCCGGCCAAGCAGAAGCGGCGGCATCGAAATC
CCCACGACCTGGGGTCCTCCCTCTTTCATCCTACCACAGCCTACCGGAAG
GGCCTCATGAGGTCGAGCACGACGACGGTCAAGAATGAGAAAGGGAAAGA
TCATCAGGACGATGCACTACTGAAAGCGTCACCCACCGGCATTCAGGAGC
AGCTGCAGCAGCGGCAGCAGCGGCAGCAGCAGCAACAACAACAGAAGCAC
GAATCGCGCCGACCGAATCAGAGGAAGGGGGGATCACTGCTGGGCCCGCT
TCTACAGGCGCGTGGTATGGATGATATCTGCATTCCCGAGCCTATGTCTT
CCGTGGTTTGGATCCGACAGGGCGAGGTTGAGGTGCATTGCTCGAGCGCT
TTCAGCAAGGTCTTTCTTTCGACGGACGAGCTAAGCCACCGGCTTCGGCA
GGAAGGGGTGATCGCGCCTTACGTGTGGGGGAGTAAAATAATCGCGCGGG
AAGATTTGCTGGCGTATTACAAGGCTATTGGTGAGGTCCTGTACGGGCAT
GCTGAGCTAGCGGATCGACGATTTCTTGCTCGCTGCATTAGCAAAACAGG
GCAGAGTATTCTCTCGCTGGTCCGGGTAATGGGGGGCCACAACCTTGAAG
CCCACACAGGCCTCCTCGCCTTCACTGTCACCCCCTTGCCTAGTTCGCGT
TATCTCCGCAAGATCTCCGCTCAAGATTCCTTGTCGTCCTGGTCCCCTTC
ATCTCTATGGGCGCAACGGCCGCTGCCACCGCTCCATTTCCAGCAGCGAG
AGCAACAAGTGTCTGCTTTCAGTCTTCACCATTCGATGCCCCAACTTCCC
TCCAACCAGCAACAGCAGCAGTCGCATGGGCAGACTTTGTCAACTCGTCT
GGAGTTGTTTGAGGACGACCTGTCGGACGTACTCGCCGAGGCTCCCGAGG
AGCGTGGTTCTGTTGTTATCAGCGCGCCACGTGAAGCTACATGGCACTCG
GCGCCAGCGTCGTCGGTGATGGAGGAAAATGATGCAATGACTGTGACTGC
TGCGCCAAATTGTGCTAGTAGTAGTGGATGTGACGTTGGGAGTGTAGTGC
CTTGCATAAAAGACGATGATAGCGCTTACACTCATCTATCTGTCTGTGGT
GGTGGTGGTAGTGGTGGTGGTGGTGGTGGTGATGTCAGATCTAGGTATAC
TCCCTTGGCAGGTACTTCTTTGCTCCCTCCCCTTTCCACGATCTTTGAAG
AGCAACCGCTTGGTGTGCCTGTATCTTCCCATCCACAGCAACGCCCATCA
CTACAACCTCCCCCCTCCGGACATGAGAAAAGCAAGTTAAAAGAAGGACG
AGAAGATCGAGCGGTGACAGGAGGAGGGGAAGCGACAGGACCAGTACCAG
CAGCACCAGCACCAGCTGCAGAATCGTCGGTGGTGACGACGATGGAGGCG
ACGGCAACATCAGTGACATCGGCTGTATCACTTGCGGCAGTCAACGAAGG
GATAGACGAGAGTGTGTGGGATTTGGATGCGGGTATTCTTGAAGAGATAT
TCGGGAAAGCAGGGGAGGAGATGTTTGGGCCGCCAAGTGAAGGGATGGAT
CAAAGCCCGAGGCAGGGAGGGCAAGGACAGAGGGCGCATATGATGTCGCC
GTCGTCCTTGGGAATGCAAACGGAGATTATGGTGGAACCTGAGGAGAAGG
CATCTGGCACGACTGTTGCGACTGTGTTTCCTTCCCGGCCACTGGCGACG
ATTGCCGTGGACCCTCTTATGCCGGTTGCTTCTCCTCCTTTTCCTTCCCC
AACTTCTTCTGGTGGCCAGCTCTACCAAGAAGAGCAGCTGCAGCAGCAGC
GCCAGCTACATTTCCACTTGCAGCATTTGCAGCAAATGTACCACCACAAT
TGCCAGCAGCAGCAAAACCACCACCAGCAACAACAACAACAACCACAACA
ACAACAACAACAACAACAACAACAACAAGAGCAGGAGCAGGAGAAGCAGG
AGAAGCTGCTGCAGCAGTTGTTGCAGCAGCAGCAGCAGCAGCTGTTGCCG
CAGCAGAACATGCCTCCACCCTCGACAAACGATATGTTGCCTCCCTCCGC
CCGTCCTCTGCAGCCAATCCAAGAGATCTCGACGATATGGATGCTGGAAG
GTGATAAAAAGTAGGGATTAAAAAAATGGATGGGCGATGGAGGACAGGTT
GTAGAGGGAGGGAGAAGAGGAGCGCGGAGCATTGATGTAGTTCACCGGAT
GAGGATGAACTATATTCGTAAAGCGCGAATGAGAAATCAACTTCTCGTTG
GTCATGTGTAAGACTCGAAAGAGGAAGAAGACAGATTTGTAGCGGTAGAA
AAGACTGGTCGCATTTATGCGTTCGGACCAGAAGACGACTGAGGGAAATT
ATTATGACAGTGCGGAATGAAGGTAGCAAAGATTTAGATTAGAAAATGAG
CGCGCCGATTTGATAATGACTGCACAGCATACCATCTTTGTGATGGCGCA
TTTCACCTTTCTTGTGACCTTACCCGCTCTTTGGGTGCGATGATGATTGG
GGCCCTGAAACCGAAAAAGCAAAGGTGTGCACAACACACACGAATTTATT
TCAATCAAGGGGCAACTTTGCAGAAATGAAATATGGTTGCAAGATTCAGG
AGAGAGAGAGAGAGAGAGAGAGA
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protein sequence of NO11G00720.1

>NO11G00720.1-protein ID=NO11G00720.1-protein|Name=NO11G00720.1|organism=Nannochloropsis oceanica|type=polypeptide|length=848bp
MNSSKDMEKSQPRAVEIKKKNTFAKRRKVTWGENVDQYDNDQVEPQSPLT
ALALSEVAQCHPIMASELIARACVGLIEAGNAHIARIRASMQVMEEYKKV
FFVDCSWGLLDRLRDVLSSIEVRGLKSYTQKQQPAKQKRRHRNPHDLGSS
LFHPTTAYRKGLMRSSTTTVKNEKGKDHQDDALLKASPTGIQEQLQQRQQ
RQQQQQQQKHESRRPNQRKGGSLLGPLLQARGMDDICIPEPMSSVVWIRQ
GEVEVHCSSAFSKVFLSTDELSHRLRQEGVIAPYVWGSKIIAREDLLAYY
KAIGEVLYGHAELADRRFLARCISKTGQSILSLVRVMGGHNLEAHTGLLA
FTVTPLPSSRYLRKISAQDSLSSWSPSSLWAQRPLPPLHFQQREQQVSAF
SLHHSMPQLPSNQQQQQSHGQTLSTRLELFEDDLSDVLAEAPEERGSVVI
SAPREATWHSAPASSVMEENDAMTVTAAPNCASSSGCDVGSVVPCIKDDD
SAYTHLSVCGGGGSGGGGGGDVRSRYTPLAGTSLLPPLSTIFEEQPLGVP
VSSHPQQRPSLQPPPSGHEKSKLKEGREDRAVTGGGEATGPVPAAPAPAA
ESSVVTTMEATATSVTSAVSLAAVNEGIDESVWDLDAGILEEIFGKAGEE
MFGPPSEGMDQSPRQGGQGQRAHMMSPSSLGMQTEIMVEPEEKASGTTVA
TVFPSRPLATIAVDPLMPVASPPFPSPTSSGGQLYQEEQLQQQRQLHFHL
QHLQQMYHHNCQQQQNHHQQQQQQPQQQQQQQQQQQEQEQEKQEKLLQQL
LQQQQQQLLPQQNMPPPSTNDMLPPSARPLQPIQEISTIWMLEGDKK*
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Synonyms
Publications