NO11G00510, NO11G00510 (gene) Nannochloropsis oceanica

Overview
NameNO11G00510
Unique NameNO11G00510
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3274
Alignment locationchr11:222831..226104 -

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Properties
Property NameValue
DescriptionCyanate hydratase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr11genomechr11:222831..226104 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036581Cyanate_lyase_C_sf
IPR003712Cyanate_lyase_C
IPR010982Lambda_DNA-bd_dom
IPR008076Cyanase
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0008824cyanate hydratase activity
GO:0008824cyanate hydratase activity
GO:0003824catalytic activity
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0009439cyanate metabolic process
GO:0009439cyanate metabolic process
GO:0009987cellular process
GO:0008152metabolic process
Homology
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BLAST of NO11G00510 vs. NCBI_GenBank
Match: EWM25168.1 (cyanate hydratase [Nannochloropsis gaditana])

HSP 1 Score: 180.6 bits (457), Expect = 4.000e-42
Identity = 100/146 (68.49%), Postives = 111/146 (76.03%), Query Frame = 0 
Query:    1 MLSSFRLAVSRH-VSSSSLRP-SLLPTTSNATRRLATAFAEEDKAFHVSNLLAAKKKAGLTFDEIAVETGLTNAYVAQLFYRQAHLKPETAKKMKAAVPTLTTDDLEVMQEVPFRSYDRAVLRTEPLIYRLEEAVLHYGMGKNIVI 145
            MLS  R A SR  + S   RP S  P +   TR  AT F EE+KA HV NLL AKK+A LTFDEIA +TGLTNAYVAQLFYRQA LKPET  KM+AAVPTLT  DLE+MQEVPFRSYDR VLRTEPL+YRLEEAVLHYG+G   ++
Sbjct:    1 MLSGTRRAFSRRSILSPWTRPTSFAPASITPTRAFATGFIEEEKAVHVHNLLKAKKEARLTFDEIAAKTGLTNAYVAQLFYRQAQLKPETVPKMEAAVPTLTGKDLEIMQEVPFRSYDRDVLRTEPLVYRLEEAVLHYGLGIKAIV 146
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BLAST of NO11G00510 vs. NCBI_GenBank
Match: A9TND9.1 (RecName: Full=Cyanate hydratase; Short=Cyanase; AltName: Full=Cyanate hydrolase; AltName: Full=Cyanate lyase)

HSP 1 Score: 113.6 bits (283), Expect = 6.000e-22
Identity = 60/96 (62.50%), Postives = 72/96 (75.00%), Query Frame = 0 
Query:   42 KAFHVSNLLAAKKKAGLTFDEIAVETGLTNAYVAQLFYRQAHLKPETAKKMKAAVPTLTTDDLEVMQEVPFRSYDRAVLRTEPLIYRLEEAVLHYG 138
            K+  VS LL  KK++G T+ EIA  TGLTNAYVAQLF RQAHLKPETA  +KAAVP L+ D L  MQE+P RS+D  V++ +P IYRL EA +HYG
Sbjct:    7 KSALVSRLLQVKKESGKTYTEIAKLTGLTNAYVAQLFRRQAHLKPETASALKAAVPALSDDLLAAMQEIPMRSFDPTVVQ-DPTIYRLHEATVHYG 101
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BLAST of NO11G00510 vs. NCBI_GenBank
Match: XP_024356533.1 (cyanate hydratase [Physcomitrella patens] >XP_024356534.1 cyanate hydratase [Physcomitrella patens] >XP_024356536.1 cyanate hydratase [Physcomitrella patens] >XP_024356537.1 cyanate hydratase [Physcomitrella patens] >XP_024356538.1 cyanate hydratase [Physcomitrella patens] >XP_024356539.1 cyanate hydratase [Physcomitrella patens] >XP_024356540.1 cyanate hydratase [Physcomitrella patens] >PNR34187.1 hypothetical protein PHYPA_024004 [Physcomitrella patens])

HSP 1 Score: 113.6 bits (283), Expect = 6.000e-22
Identity = 60/96 (62.50%), Postives = 72/96 (75.00%), Query Frame = 0 
Query:   42 KAFHVSNLLAAKKKAGLTFDEIAVETGLTNAYVAQLFYRQAHLKPETAKKMKAAVPTLTTDDLEVMQEVPFRSYDRAVLRTEPLIYRLEEAVLHYG 138
            K+  VS LL  KK++G T+ EIA  TGLTNAYVAQLF RQAHLKPETA  +KAAVP L+ D L  MQE+P RS+D  V++ +P IYRL EA +HYG
Sbjct:    7 KSALVSRLLQVKKESGKTYTEIAKLTGLTNAYVAQLFRRQAHLKPETASALKAAVPALSDDLLAAMQEIPMRSFDPTVVQ-DPTIYRLHEATVHYG 101
[Close]
BLAST of NO11G00510 vs. NCBI_GenBank
Match: GAQ88149.1 (cyanate hydratase [Klebsormidium nitens])

HSP 1 Score: 112.5 bits (280), Expect = 1.300e-21
Identity = 61/105 (58.10%), Postives = 76/105 (72.38%), Query Frame = 0 
Query:   40 EDKAFHVSNLLAAKKKAGLTFDEIAVETGLTNAYVAQLFYRQAHLKPETAKKMKAAVPTLTTDDLEVMQEVPFRSYDRAVLRTEPLIYRLEEAVLHYGMG-KNIV 144
            E K   V  LLAAK K+G T+D+IA E GLTNAY AQLF+ QA LK +TA K+KAAVP L+  D E M++ P RS+D  +++ EPLIYRL EAV+HYG   K+IV
Sbjct:    5 EQKEALVQRLLAAKAKSGKTYDQIAKEVGLTNAYTAQLFFNQAQLKSDTAPKLKAAVPDLSDADAEEMKKEPMRSFDPTIIQ-EPLIYRLNEAVMHYGRAIKDIV 108
[Close]
BLAST of NO11G00510 vs. NCBI_GenBank
Match: XP_005844860.1 (hypothetical protein CHLNCDRAFT_138362 [Chlorella variabilis] >EFN52758.1 hypothetical protein CHLNCDRAFT_138362 [Chlorella variabilis])

HSP 1 Score: 112.1 bits (279), Expect = 1.700e-21
Identity = 60/111 (54.05%), Postives = 77/111 (69.37%), Query Frame = 0 
Query:   27 SNATRRLATAFAEEDKAFHVSNLLAAKKKAGLTFDEIAVETGLTNAYVAQLFYRQAHLKPETAKKMKAAVPTLTTDDLEVMQEVPFRSYDRAVLRTEPLIYRLEEAVLHYG 138
            ++A  +L      + K   V  LLAAK  +G TFDEIAV+ G TNAY AQLF+ QA LKP+TA K+KAAVP ++ + L VMQ+ P RS+D A+L  EPLIYR+ EA+ HYG
Sbjct:   33 ASAHDQLLAPRTRDAKVAFVDQLLAAKAASGKTFDEIAVDIGCTNAYTAQLFFNQAQLKPDTAAKLKAAVPQISEEALAVMQKAPMRSFDPAILE-EPLIYRMIEAINHYG 142
[Close]
BLAST of NO11G00510 vs. NCBI_GenBank
Match: PIA36296.1 (hypothetical protein AQUCO_03400295v1 [Aquilegia coerulea])

HSP 1 Score: 110.9 bits (276), Expect = 3.900e-21
Identity = 56/99 (56.57%), Postives = 76/99 (76.77%), Query Frame = 0 
Query:   39 EEDKAFHVSNLLAAKKKAGLTFDEIAVETGLTNAYVAQLFYRQAHLKPETAKKMKAAVPTLTTDDLEVMQEVPFRSYDRAVLRTEPLIYRLEEAVLHYG 138
            E++KA  V+ LL+ KKK+G TF++IA ETGLTN YVAQL  RQA LKPETA K++ A+P L+   +++M E P RSYD ++L+ +P IYRL EAV+H+G
Sbjct:    2 EQNKAIIVNQLLSVKKKSGKTFNQIAEETGLTNVYVAQLLRRQAQLKPETAPKLQQALPQLSDQLVQLMMESPLRSYDPSILQ-DPTIYRLNEAVMHFG 99
[Close]
BLAST of NO11G00510 vs. NCBI_GenBank
Match: XP_009586651.1 (PREDICTED: cyanate hydratase isoform X1 [Nicotiana tomentosiformis])

HSP 1 Score: 110.2 bits (274), Expect = 6.600e-21
Identity = 55/99 (55.56%), Postives = 74/99 (74.75%), Query Frame = 0 
Query:   39 EEDKAFHVSNLLAAKKKAGLTFDEIAVETGLTNAYVAQLFYRQAHLKPETAKKMKAAVPTLTTDDLEVMQEVPFRSYDRAVLRTEPLIYRLEEAVLHYG 138
            + +KA  V++L++ K+K+G TF +IA ETGLTN YVAQL  RQA LKPETA K+KAA+P L+ D L  M E P RSYD  +++ +P +YRL EAV+H+G
Sbjct:    4 QSNKANMVASLMSVKQKSGKTFSQIAEETGLTNVYVAQLLRRQAQLKPETASKLKAALPLLSDDQLHDMMEAPLRSYDPNLIQ-DPTVYRLNEAVMHFG 101
[Close]
BLAST of NO11G00510 vs. NCBI_GenBank
Match: XP_016503294.1 (PREDICTED: cyanate hydratase-like [Nicotiana tabacum])

HSP 1 Score: 110.2 bits (274), Expect = 6.600e-21
Identity = 55/99 (55.56%), Postives = 74/99 (74.75%), Query Frame = 0 
Query:   39 EEDKAFHVSNLLAAKKKAGLTFDEIAVETGLTNAYVAQLFYRQAHLKPETAKKMKAAVPTLTTDDLEVMQEVPFRSYDRAVLRTEPLIYRLEEAVLHYG 138
            + +KA  V++L++ K+K+G TF +IA ETGLTN YVAQL  RQA LKPETA K+KAA+P L+ D L  M E P RSYD  +++ +P +YRL EAV+H+G
Sbjct:    4 QSNKANMVASLMSVKQKSGKTFSQIAEETGLTNVYVAQLLRRQAQLKPETASKLKAALPLLSDDQLHDMMEAPLRSYDPNLIQ-DPTVYRLNEAVMHFG 101
[Close]
BLAST of NO11G00510 vs. NCBI_GenBank
Match: XP_018622287.1 (PREDICTED: cyanate hydratase isoform X2 [Nicotiana tomentosiformis])

HSP 1 Score: 110.2 bits (274), Expect = 6.600e-21
Identity = 55/99 (55.56%), Postives = 74/99 (74.75%), Query Frame = 0 
Query:   39 EEDKAFHVSNLLAAKKKAGLTFDEIAVETGLTNAYVAQLFYRQAHLKPETAKKMKAAVPTLTTDDLEVMQEVPFRSYDRAVLRTEPLIYRLEEAVLHYG 138
            + +KA  V++L++ K+K+G TF +IA ETGLTN YVAQL  RQA LKPETA K+KAA+P L+ D L  M E P RSYD  +++ +P +YRL EAV+H+G
Sbjct:    4 QSNKANMVASLMSVKQKSGKTFSQIAEETGLTNVYVAQLLRRQAQLKPETASKLKAALPLLSDDQLHDMMEAPLRSYDPNLIQ-DPTVYRLNEAVMHFG 101
[Close]
BLAST of NO11G00510 vs. NCBI_GenBank
Match: XP_018622288.1 (PREDICTED: cyanate hydratase isoform X3 [Nicotiana tomentosiformis])

HSP 1 Score: 110.2 bits (274), Expect = 6.600e-21
Identity = 55/99 (55.56%), Postives = 74/99 (74.75%), Query Frame = 0 
Query:   39 EEDKAFHVSNLLAAKKKAGLTFDEIAVETGLTNAYVAQLFYRQAHLKPETAKKMKAAVPTLTTDDLEVMQEVPFRSYDRAVLRTEPLIYRLEEAVLHYG 138
            + +KA  V++L++ K+K+G TF +IA ETGLTN YVAQL  RQA LKPETA K+KAA+P L+ D L  M E P RSYD  +++ +P +YRL EAV+H+G
Sbjct:    4 QSNKANMVASLMSVKQKSGKTFSQIAEETGLTNVYVAQLLRRQAQLKPETASKLKAALPLLSDDQLHDMMEAPLRSYDPNLIQ-DPTVYRLNEAVMHFG 101
The following BLAST results are available for this feature:
BLAST of NO11G00510 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM25168.14.000e-4268.49cyanate hydratase [Nannochloropsis gaditana][more]
A9TND9.16.000e-2262.50RecName: Full=Cyanate hydratase; Short=Cyanase; Al... [more]
XP_024356533.16.000e-2262.50cyanate hydratase [Physcomitrella patens] >XP_0243... [more]
GAQ88149.11.300e-2158.10cyanate hydratase [Klebsormidium nitens][more]
XP_005844860.11.700e-2154.05hypothetical protein CHLNCDRAFT_138362 [Chlorella ... [more]
PIA36296.13.900e-2156.57hypothetical protein AQUCO_03400295v1 [Aquilegia c... [more]
XP_009586651.16.600e-2155.56PREDICTED: cyanate hydratase isoform X1 [Nicotiana... [more]
XP_016503294.16.600e-2155.56PREDICTED: cyanate hydratase-like [Nicotiana tabac... [more]
XP_018622287.16.600e-2155.56PREDICTED: cyanate hydratase isoform X2 [Nicotiana... [more]
XP_018622288.16.600e-2155.56PREDICTED: cyanate hydratase isoform X3 [Nicotiana... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR067ncniR067Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR010ncniR010Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR018ngnoR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|590791gene_4911Nannochloropsis oceanica (N. oceanica CCMP1779)gene
jgi.p|Nanoce1779_2|609917gene_10278Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100490g4gene5330Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO11G00510.2NO11G00510.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO11G00510.1NO11G00510.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO11G00510.2NO11G00510.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO11G00510.1NO11G00510.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO11G00510 ID=NO11G00510|Name=NO11G00510|organism=Nannochloropsis oceanica|type=gene|length=3274bp
GGGATTACGGCGATGGGACGAACAAGTGGCTCTTCCCCTTCCTTTCTTAC
CACTTGCATGGACAGTTTGCGATGACACTAGCAATGGCATTAGCAGCATC
ATTACCTTGCAGTCGCCTTTCTCATGCCCCCCGCTTGCGTTGACTTGTCT
TGGTGGATGGATTGCTCGGCCGTGGACGGAGCTCGTCAACGTCCTGCCTA
CTTTTCGATGCTCGTCTGTTCTGTGTATCTCTCTCCTTCGACATACAATT
ACGCCAAAATCAAACGCAAAATCTCATCAACGGATAACTCTTTGTGTTCT
TTGCGCTTTTCTACAATGTCTGCGGCATGCCAGCCTTTCAAAGGAATTTC
CCCCCCCCCCCAGCAATGCTTAAGATACTCTCGTTCTACAAGGCATTTAA
CCTCTCTGCCCGCCCATCCTCCCGTAACAACACAGAAACATAACCTCTTA
TCAATCGTATTCAATAAAGTGTCTCAAGTAACATAAATGTTGTCATCCTT
CCGCCTTGCCGTGTCTCGTCATGTGTCCTCGTCCTCTCTCCGTCCGTCCC
TCCTTCCCACCACCAGCAACGCAACCCGTCGTCTCGCCACAGCCTTTGCA
GAGGAAGACAAAGCCTTCCATGTATCTAACCTGTTAGCAGCCAAGAAAAA
GGCAGGCTTAACATTCGACGAAATTGCGGTCGAGACGGGTTTGACAAATG
CCTATGTCGCCCAGgtaggtaggaaaggaggtaaatgagggagggtggtg
aagggggaggagagcggcgttgaaacgcttgctcattttgtcgttaacgg
ccaaatgtgaccacgcttagacacaatctccaaattttatgagcggtctc
agaacattggcgagcaacagcactcaccctttcctacctcactccctctc
ttctctcttcctcccgtcctcccttcctcccttcctccctttctttctct
ctccctccgtcatccccgaagCTCTTCTACCGTCAGGCACACCTTAAGCC
CGAGACCGCAAAGAAAATGAAGGCAGCCGTGCCAACTCTCACAACGGACG
ACTTGGAAGTGATGCAGGAGgtaacgaaccactgcgaagggaggggagga
cggagggtgagaaggaaatatagaaagagaggaataagagaaggcttact
cctttgatcgatattataaatatacgtacatggaattctttagGTGCCTT
TCAGGTCGTATGATCGTGCCGTGTTGCGGACTGAGCCTTTGATATACAGG
CTGGAGGAAGCTGTGCTGCACTATGGCATGGgtaagaacattgttattta
tttaatttcatatttcatatttatatattattttatcttaatctacctgt
ttataaataaattcatgtacccttaacaatcgacatgtaaaaaaagggaa
ggagattcgtgcaaggaaacgaaaaagccaaatcagagatggatgcgagg
gaggggaagaggaagggaggggaagaggggaagagggagcgagggataga
aagaggtcgggaggaaagcatactccaaaagtgttttacacaatgaccgg
tcttccgggtcgttgacactgtgcatttcctccctatcttcctctcctct
cctgctttcctttcctctctcttcaccctttcttttctccttccctccct
ccctccttgatgacacacttttgcgtgcaccaagaagagtacttaagtaa
ttggtgggcatgcccctttgagcgcggatcaggcctatatctatttctcc
atcctcattacgtatccatatctcccgtatcttcccttcttattcctccc
tccctcctcttgttctgcctcctccctccttttttaccgtccttttctgt
tctgatgtaagatatatgtaaatatcatgactgtcatatatctcctttcc
acgcgccctttttcggtcaaaaaggcacagctcacacgcatgcgcatgcg
tcgggagcgggaggtggtgggactaccatgcgattccatgctccgccttc
cctgtgtgccgtacgatacaccctgtgtgccgtacgatacatatgtatat
atatatatacataagcaactatataacatgaacaaaccaataaatcgata
aatatatatacacatacaagcaaccatataacatgaataaatcgacaaat
gaataaataaacagataaacttatatgtagacaccggagtaaacaatgca
ggccatgattagactcgaatgacttttcaattacccaaggcgggggcaaa
aagcctatcaccgacgtgcgggaccaattaataactacacttgaactgag
ccgcttccgactacatgcatgcacgagggagggaaggaggaagggagaaa
tgacattattgcgtacatgcacgagggagggaaggaggaaaagagaagat
aagtggaacaggaccttcctctgacagaacgctcactttcaccgtcttcc
ttcatctcattctctcgatttatacaaacagGGATCAAGGCCATCGTGAA
CGAAAAATTCGGGGATGgtacgtcctttcgggcatggggatgctttccct
ccctccctccctccctcctcccatccccccctccctctctccctccctcc
ctccctccctccaatccttccttctcttactcgcccttgacctcccaccc
cccccacactctctcttttactttctattacaaaaaatgaaacatgattg
tgtttcatcccctttccttcccctccctcccctccctcctcttcgccctg
ccctcagGGATCATGTCCGCGATTGACATGTACGCCACCGTCGAGAAAGT
CAAGGGCTCGCAAGGCGAGGACCGAGTTTTGGTGACCCTGAATGGGAAAT
TTTTGCCCCATGTGGAGCAAAGGGTTGAGAACAATGTGCAGGCACCGGTG
GTCGAGGAGGGGGGGTTTAAAAAAACAACGCGATAGTAGCAGCCGTAGGA
GTAGCAGCAACCTTCCGGGAATGAAGGGAGGAAGGAAGGAGGAGGAGGGA
GGGAGGGAAGGAGGGAGGGAAGGAGGAGTACCTCTGGACGGTAGTCAGGA
TGTGAAGTAGAGGCAAGGACGCGGTAAGGAAATCAAGAGTAGAGATAGGA
AAAGCAGGAAAAAGATAGATTAGAGCATATGTGAAAAAAATTGAAGAGCG
ACAGAGAGAGAGAGAGAGGGAGACTTTGTGGAATATTGGAAGATGGGAGA
AAAGAGACAGGAAGGATAAAGAAAAAGTTTGATTAGGGCGATAGAAAGGA
GAAAGAAAAACAACTAGTGGTGTA
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protein sequence of NO11G00510.2

>NO11G00510.2-protein ID=NO11G00510.2-protein|Name=NO11G00510.2|organism=Nannochloropsis oceanica|type=polypeptide|length=170bp
MLSSFRLAVSRHVSSSSLRPSLLPTTSNATRRLATAFAEEDKAFHVSNLL
AAKKKAGLTFDEIAVETGLTNAYVAQLFYRQAHLKPETAKKMKAAVPTLT
TDDLEVMQEVPFRSYDRAVLRTEPLIYRLEEAVLHYGMGKNIVIYLISYF
IFIYYFILIYLFINKFMYP*
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protein sequence of NO11G00510.1

>NO11G00510.1-protein ID=NO11G00510.1-protein|Name=NO11G00510.1|organism=Nannochloropsis oceanica|type=polypeptide|length=210bp
MLSSFRLAVSRHVSSSSLRPSLLPTTSNATRRLATAFAEEDKAFHVSNLL
AAKKKAGLTFDEIAVETGLTNAYVAQLFYRQAHLKPETAKKMKAAVPTLT
TDDLEVMQEVPFRSYDRAVLRTEPLIYRLEEAVLHYGMGIKAIVNEKFGD
GIMSAIDMYATVEKVKGSQGEDRVLVTLNGKFLPHVEQRVENNVQAPVVE
EGGFKKTTR*
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Synonyms
Publications