|
|
Properties
| Property Name | Value |
|---|
| Description | Unknown protein |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr11 | genome | chr11:218777..221712 - |
Analyses
This gene is derived from or has results from the following analyses
Homology
BLAST of NO11G00500 vs. NCBI_GenBank
Match: EWM25170.1 (hypothetical protein Naga_100490g1 [Nannochloropsis gaditana]) HSP 1 Score: 77.4 bits (189), Expect = 2.300e-10 Identity = 40/72 (55.56%), Postives = 51/72 (70.83%), Query Frame = 0
Query: 133 IRNIVSSPETTLPLLLSLIATHAPQSYFDAENAAAVLNRLGREGGKETAQLVKDPRLGLLLTRLRTLGEGIE 205
+R VSSP+T LP LLSL++ HA ++YFD E AAA LNRLG+E G+ + + KD L LL RL LGEG+E
Sbjct: 175 LRAAVSSPQTPLPFLLSLLSQHASRTYFDTETAAAFLNRLGKEQGRGLSVVRKDRGLQALLARLLILGEGVE 246
The following BLAST results are available for this feature:
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO11G00500 ID=NO11G00500|Name=NO11G00500|organism=Nannochloropsis oceanica|type=gene|length=2936bp
ATGAGGAGAAGAGCGAGATGCTCGCCCTGTGTCTTGCTGCTAGgtaagca
tcgagagagagagagggagagagagggagagagggaggtaaagcggggga
gcaaagccggggaagcaaaattaggggagcaaagcgtaatatgtggtgag
atcattgatattccctaccaagaccgtgggcttgtgctgatccatctaaa
gtcacaaactccccaacttacccaccttccgttcgtccctccccccttcc
ctcccttccttcatccctccctctcctccctcccctccctccgctcttcc
tcgccccctcccaaagTCTCATCCTGCTGGGCGCTCTTCCACCTAGCACG
GGCCTTCTGGCTACCGCAAGCGCGACTTTCTGCCCATGTTATTGATATGA
GAAGAATCCCTGCGGACTGCTGCAGCAGCAGCAGAGAAGCAGTGCAGATG
CTGCTAAAAAGAAGGAGAGAAGATGAAATAGAGGAGCATCAGCAACTACA
ACAACGGCAACCGTTACCCCCCTCATTGAAGTCATCTCCTTCATGGCACA
AGCAAGAGCAGTCAAGCACAATGCCCCCCTATTCCGCCTCCTTCTCCTTC
CCTTCCTCCTCCCCTTCCTCCCCCTCATCCTCATTCTCCTCTTCCTCCCC
CCTCTCCCCGCAAACCCAAATCCGCAATATCGTCTCCTCTCCTGAGACGA
CCCTTCCCCTCCTCCTCTCCCTCATCGCCACACACGCCCCTCAGTCATAT
TTTGATGCCGAAAACGCCGCAGCGGTGCTTAACAGACTAGGCCGGGAAGG
AGGGAAGGAGACTGCCCAGCTGGTGAAGGACCCGCGGTTGGGCCTGCTAT
TGACGAGGCTGCGGACGTTGGGGGAAGGGATAGAGGGGGGAATTGAAGGG
GGGGAGGAGGATGAGGGGGAGGAGGAAGTGAGGGTGTTGCGGTTGATGAG
GGAGAGGATGTGGACTCCGAAGGCCTGTACTCTGATTTTAAACGGGCTGG
GGAAAGTGTTCAGGCAAGGGGCAGGGGGAGGAAGGGAGGGAGGGAGGGAG
TGGGAGAGGAATGTGGCGATGCTTCCGGgtattgtaggattcgttacggc
gtgtctgacacgacaggccgaagccctgagtcctcgtcatgtcgccctct
ccctcaatgccctcgcaaaactccaagacaacggcctccccctctccccc
tccctcctgtccgccttccttccaaccctcctccaccgctcccacgacat
tctctacctcttcccccccaagAGCTCTCCACCCTCGTCAACGCCCTCGC
CCGGCTCCTTCCCCCCTCCCTTCCTCCCTTCTTCCTCCGCGACCTGGAGG
CCCGCGCAGACGCCCTCTTGTTCCACTGCCAGCCCCAAGATCTCGCCAAC
CTCATCCACGGCTTTGCCAAGCTCCACCACGAACACGAGGGAGGGAAGGA
CGGCGAGGGAGGGAGGGAGGGCGGGCCGGACAGCAGCGAAAGGGAGGGAG
GGCGGGACAGAGGACAGTGCTCCTTGCCCTTCCTTAGACGTTTCCAAGAA
GCAGCAGCCACGCAAGCGCAGTACTTCAAGCCCTTGGAGCTAGCCATGAC
AGTATATGGGCTCTCCCACCTCCTCCCCTTCCCTCCCTCCCTCCCTCCCT
CCCTCGAGCCTTATTTCTGCCCGACGTGGGCGCGGGCTTTCCTAAACCTT
AGCGAGGGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGACAGCAGGGCCT
ACGTGCGGGGGAGGTGGTGATGTTCTTGAACGGTTTGGCGCGAATGGGGC
ACTGCCCTCCTCTTTCCGAGCTACAGCAATATACCCGGAAGATCTTCTCC
TGCATCCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCCTCCTCCTC
CTCCTCCTCCTCCTCCTCAACCTTGTCCCTGAGTGTGTTTTCAGCGCATG
AGCTGACGACGTTAGCGCATGCTTGGGTCTTGTTCCGGGAAGGGGGGGAG
GGAGGGAGGGAGGGCGGGGAGGAGGACGAGGTGGGTGAGGTAGTAGGAGA
AGTATTGGAAGCAGTGGTAGCTGAGGCGGAGGGAAGGCTTGGGGAGTTTC
AGGCGGGAGAAATTGCGTCCCTAATCCACTCTCTGGGAAAAGCCCGATGT
CCTCCCCCCGAGTCGTTTCTGGTAACGGCCGTGGAACGGTTGGAGGCGTG
CCTCGCCGAGGAGAGGGAGGGAGGAAGTGAGGGAGGGAGGGATGGGGGAG
TGTTGGGGCCGCGGGCGGTGTGCAATCTGATGAGCGGGTGTGGGAAGTTG
GGCTTCTATCCCGGCTTGACGCTCGTGGAGGGGGTGAGGGAGGTATTGTT
CGCACATCTCCCCCAACTCAACGCCCGTGACGTCATCGACATGTTGAGTG
CATGGGCGGACCTGCACACCTTATCCTCCTTCCCTCCCTCTTCCTCCTCG
TCCTCCCCGTCTGCGTTGGACAGTAGGATGGATGCGGCCCTTCTGGCCGT
CCTTCTACCTATGGTCCCTACTGTGGTGCTGGAGGAACAGCAGCCTTCCT
CCCCCTCCCCCCTTCCTTCCTCGGAGGGAGGACTGGTGCGTCTTCTCGGC
GCTCTCTGGCGCCTTGAGCCTGTTCTCTCTTCTCTTCCGCAAACGGAAGC
GGAGGCCCTCCTCCCCGCCCTCCCTCCCGATCTCACCCCCTACCGTTACT
TGTCGTTGATTGACAAAGTGCAGACGCGCCTCCTTGAGGTGACCTTGGGG
GGAGGGAGGGAAGGAGGGAGGGAGGGCGGGCGGGCGGGAAATTGGAAGGC
AGGAGTTCGGGCGTTGGGGGCCGTAGTGAGGCTGGCACTGGTGATGGAGG
AGACGGGAGAGGGGGAGGGCGGGGCAGAGGAAGGGGGGGGATGCAACAGT
ACCGAGCCTTTCTGCGGGTGTTGGCGGAGGGGGTAA back to topprotein sequence of NO11G00500.1 >NO11G00500.1-protein ID=NO11G00500.1-protein|Name=NO11G00500.1|organism=Nannochloropsis oceanica|type=polypeptide|length=823bp
MRRRARCSPCVLLLVSSCWALFHLARAFWLPQARLSAHVIDMRRIPADCC
SSSREAVQMLLKRRREDEIEEHQQLQQRQPLPPSLKSSPSWHKQEQSSTM
PPYSASFSFPSSSPSSPSSSFSSSSPLSPQTQIRNIVSSPETTLPLLLSL
IATHAPQSYFDAENAAAVLNRLGREGGKETAQLVKDPRLGLLLTRLRTLG
EGIEGGIEGGEEDEGEEEVRVLRLMRERMWTPKACTLILNGLGKVFRQGA
GGGREGGREWERNVAMLPELSTLVNALARLLPPSLPPFFLRDLEARADAL
LFHCQPQDLANLIHGFAKLHHEHEGGKDGEGGREGGPDSSEREGGRDRGQ
CSLPFLRRFQEAAATQAQYFKPLELAMTVYGLSHLLPFPPSLPPSLEPYF
CPTWARAFLNLSEGEGGREGGREGQQGLRAGEVVMFLNGLARMGHCPPLS
ELQQYTRKIFSCIPSSSSSSSSSSSSSSSSSSSSTLSLSVFSAHELTTLA
HAWVLFREGGEGGREGGEEDEVGEVVGEVLEAVVAEAEGRLGEFQAGEIA
SLIHSLGKARCPPPESFLVTAVERLEACLAEEREGGSEGGRDGGVLGPRA
VCNLMSGCGKLGFYPGLTLVEGVREVLFAHLPQLNARDVIDMLSAWADLH
TLSSFPPSSSSSSPSALDSRMDAALLAVLLPMVPTVVLEEQQPSSPSPLP
SSEGGLVRLLGALWRLEPVLSSLPQTEAEALLPALPPDLTPYRYLSLIDK
VQTRLLEVTLGGGREGGREGGRAGNWKAGVRALGAVVRLALVMEETGEGE
GGAEEGGGCNSTEPFCGCWRRG* back to top
|