NO11G00480, NO11G00480 (gene) Nannochloropsis oceanica

Overview
NameNO11G00480
Unique NameNO11G00480
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1573
Alignment locationchr11:214499..216071 +

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Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr11genomechr11:214499..216071 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0016787hydrolase activity
Vocabulary: INTERPRO
TermDefinition
IPR015797NUDIX_hydrolase_dom-like
IPR000086NUDIX_hydrolase_dom
Homology
BLAST of NO11G00480 vs. NCBI_GenBank
Match: CEL94097.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 151.8 bits (382), Expect = 4.000e-33
Identity = 85/179 (47.49%), Postives = 108/179 (60.34%), Query Frame = 0
Query:  150 RHAAVLIPLCNAHGQASVLFQIRTSTVRTHKGQVSFPGGHLNPNETPVQAALREFHXXXXXXXXXXXXXXXXXXFGPITILTACQPLPAVTGTVVHPFLAFIHRDVGDLSCFKPCCGEVASLFCLSLPQLLDPTLAGREDLPDTREGGRSRRLDMPFFNGGPAKVWGLTAFIMDGVLAR 329
            R AAVLIPLCN +G ASVL  +R+  + +H GQVSFPGGH+   ETP+ AALRE H                   G ITI+  C+ + AVTGT+VHP +  + RDVG+L   +    EVA +F LS+ QL DP+L   E LP    GG +    +P + GG  KVWGLTAFI++GVL R
Sbjct:  299 RQAAVLIPLCNRNGVASVLLTLRSDKI-SHPGQVSFPGGHIERGETPIDAALRETH------------EELGSRIGDITIIGTCEQVVAVTGTIVHPVIGLLRRDVGELLWIEKSDDEVADVFTLSIEQLTDPSLQTLEQLP---RGGST--YTVPAYLGGVHKVWGLTAFILEGVLRR 459          
BLAST of NO11G00480 vs. NCBI_GenBank
Match: XP_016610787.1 (hypothetical protein SPPG_01831 [Spizellomyces punctatus DAOM BR117] >KND02748.1 hypothetical protein SPPG_01831 [Spizellomyces punctatus DAOM BR117])

HSP 1 Score: 105.1 bits (261), Expect = 4.300e-19
Identity = 70/182 (38.46%), Postives = 101/182 (55.49%), Query Frame = 0
Query:  150 RHAAVLIPLCNAHGQASVLFQIRTSTVRTHKGQVSFPGGHLNPNETPVQA-ALREFHXXXXXXXXXXXXXXXXXXFGPITILTACQPLPAVTGTV-VHPFLAFIHRD---VGDLSCFKPCCGEVASLFCLSLPQLLDPTLAGREDLPDTREGGRSRRLDMPFFNGGPAKVWGLTAFIMDGVL 327
            RHAA+LIPLC AHG+ S+LF +R+S +R H G+VSFPGG ++P +  V A ALRE H                     +T+L    PLP  T ++ +HP L+ IH     V +   F P   EV  +FC+SL +LL     G +   +   GG  +RL +  +N G  ++WGLTA++++ VL
Sbjct:   79 RHAAILIPLCTAHGKPSILFTMRSSKLRRHGGEVSFPGGAVDPGDKDVIATALRETHEEILIPPDH------------VTVLGQFHPLPDRTHSILIHPILSHIHTPHSLVPESMPFNPT--EVEEVFCVSLEELL-----GMQTETEHLRGG--KRL-VRNWNVGEKRIWGLTAWVLEAVL 238          
BLAST of NO11G00480 vs. NCBI_GenBank
Match: XP_018288513.1 (hypothetical protein PHYBLDRAFT_135145 [Phycomyces blakesleeanus NRRL 1555(-)] >OAD70473.1 hypothetical protein PHYBLDRAFT_135145 [Phycomyces blakesleeanus NRRL 1555(-)])

HSP 1 Score: 99.8 bits (247), Expect = 1.800e-17
Identity = 70/183 (38.25%), Postives = 93/183 (50.82%), Query Frame = 0
Query:  150 RHAAVLIPLC-NAHGQASVLFQIRTSTVRTHKGQVSFPGGHLNPNETPVQ-AALREFHXXXXXXXXXXXXXXXXXXFGPITILTACQPLPAVTGTV-VHPFLAFIHRDV-GDLSCFKPCCGEVASLFCLSLPQLLDPTLAGREDLPDTREGGRSRRLDMPFFNGGPAKVWGLTAFIMDGVLAR 329
            ++AAVL+PLC N H Q SVLF +R   +RTHKG+VSFPGG  +P +  VQ  ALRE                       I IL     LP  +G++ VHPF+ ++ + V   L  + P   EVA  FCL L  LL P++       DT        L  P       ++WGLT+FI+DGVL +
Sbjct:   35 KNAAVLVPLCHNEHNQPSVLFTVRNLEMRTHKGEVSFPGGKQDPVDASVQETALRETMEEIGISPH------------DIDILGQFSCLPNQSGSLRVHPFVGYVRKPVNAALLDYNP--EEVAKAFCLPLEYLLRPSVRELRQFRDTSHKYTVFHLPQPI--ESETEIWGLTSFILDGVLRK 201          
BLAST of NO11G00480 vs. NCBI_GenBank
Match: XP_013234183.1 (hypothetical protein, conserved [Eimeria tenella] >CDJ43433.1 hypothetical protein, conserved [Eimeria tenella])

HSP 1 Score: 98.2 bits (243), Expect = 5.300e-17
Identity = 60/200 (30.00%), Postives = 91/200 (45.50%), Query Frame = 0
Query:  150 RHAAVLIPLCNAHGQASVLFQIRTSTVRTHKGQVSFPGGHLNPNETPVQAALREFHXXXXXXXXXXXXXXXXXXFGPITILTACQPLPAVTGTVVHPFLAFIHRDVGDLSCFKPCCGEVASLFCLSLPQLLDPTLAGREDLPDTREGGRSRR---------------------LDMPFFNGGPAKVWGLTAFIMDGVLAR 329
            R AAVL+PLCN+ G+A  LF +R+S++  H  QV FPGG + P ETP  AALRE                     GP+ IL   QP+ +V+G ++HP +  + ++  ++S  +P   EV ++F + L  L                                           L +P++      +WGLTAF++ GVL+R
Sbjct:   77 RRAAVLVPLCNSQGEACCLFTVRSSSLSNHSNQVCFPGGSMEPGETPEAAALRE-------------TAEEIGDVGPVRILGRTQPVFSVSGFILHPVIGVLQQE-ANVSLLRPNPNEVKAVFLVRLEDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLALPYYLHEQQAIWGLTAFVVSGVLSR 262          
BLAST of NO11G00480 vs. NCBI_GenBank
Match: OGQ24499.1 (hypothetical protein A2138_15890 [Deltaproteobacteria bacterium RBG_16_71_12])

HSP 1 Score: 97.1 bits (240), Expect = 1.200e-16
Identity = 68/177 (38.42%), Postives = 87/177 (49.15%), Query Frame = 0
Query:  152 AAVLIPLCNAHGQASVLFQIRTSTVRTHKGQVSFPGGHLNP-NETPVQAALREFHXXXXXXXXXXXXXXXXXXFGPITILTACQPLPAVTGTVVHPFLAFIHR-DVGDLSCFKPCCGEVASLFCLSLPQLLDPTLAGREDLPDTREGGRSRRLDMPFFNGGPAKVWGLTAFIMDGVL 327
            AAVL+PL +  G  ++LF  RT TV THKGQVSFPGG + P +E  V  ALRE H                   G + +L     + ++TG  V P L +I   D   LS  +P   EV   F L+L +L+D         PD R       L  P+F  GP  +WGLTA I+D VL
Sbjct:   40 AAVLVPLGHRDGAPAILFTKRTDTVGTHKGQVSFPGGRMEPSDEDEVACALRELHEEIGLAP------------GDVEVLGPFHDMMSITGLRVTPVLGWIGALDEARLS-LRP--DEVQQAFALTLDELVD---------PDKRATQMLGELRAPYFAAGPHPIWGLTALILDEVL 192          
BLAST of NO11G00480 vs. NCBI_GenBank
Match: CDS06536.1 (hypothetical protein LRAMOSA09064 [Lichtheimia ramosa])

HSP 1 Score: 95.9 bits (237), Expect = 2.600e-16
Identity = 64/190 (33.68%), Postives = 95/190 (50.00%), Query Frame = 0
Query:  150 RHAAVLIPLCNAHGQASVLFQIRTSTVRTHKGQVSFPGGHLNPNETPVQ-AALREFHXXXXXXXXXXXXXXXXXXFGPITILTACQPLPAVTGTV-VHPFLAFIHRDVGDLSCFKPCCGEVASLFCLSLPQLLDPTLAGREDLPDTREGGRSRRLDMPFFN---------GGPAKVWGLTAFIMDGVLAR 329
            R AAVL+PLC  +G+ASVLF +R   +RTH+G++SFPGG  +P++  +Q  ALRE                       I IL     LP  TG++ VHPFL +I   +  +        EV+S+F L +  L  P      D+ + R+  R  ++  P F           G  ++WGLT+FI+DG+  +
Sbjct:   35 RDAAVLMPLCQVNGEASVLFTVRNMNMRTHRGEISFPGGKADPHDPSLQHTALRETFEEVGIEP------------SSIDILGNYSTLPNKTGSLRVHPFLGYIKDPISSIKDLNYNKDEVSSVFSLPIDYLTRP------DIREIRQ-FRHTQVKYPVFKVPSEIEREIEGENEIWGLTSFILDGIFRK 205          
BLAST of NO11G00480 vs. NCBI_GenBank
Match: GAN03471.1 (nudix hydrolase 3 [Mucor ambiguus])

HSP 1 Score: 95.5 bits (236), Expect = 3.400e-16
Identity = 61/181 (33.70%), Postives = 96/181 (53.04%), Query Frame = 0
Query:  150 RHAAVLIPLCNAHGQASVLFQIRTSTVRTHKGQVSFPGGHLNPNETPVQ-AALREFHXXXXXXXXXXXXXXXXXXFGPITILTACQPLPAVTGTV-VHPFLAFIHRDVGDLSCFKPCCGEVASLFCLSLPQLLDPTLAGREDLPDTREGGRSRRLDMPFFNGGPAKVWGLTAFIMDGVLAR 329
            + AAVL+PLC   G+ S+LF +R   +RTH G++SFPGG  + +++  Q  ALRE                       I IL     LP  TG++ V+P++ FI +D  DL+ F P   EV+S+F L +  L+ P +   +   +++   +     +P    G  ++WGLT+FI+DGVL +
Sbjct:   37 KDAAVLVPLCVVEGKPSILFTVRNINMRTHSGEISFPGGKTDESDSSTQFTALRETKEEIGIDAE------------SIDILGCYSALPNKTGSLKVYPYVGFI-KDQVDLTKFNP--DEVSSVFTLPIDYLIQPEVRQLKQFRESKM--KYTEFKVPDHIEGEKQIWGLTSFILDGVLRK 200          
BLAST of NO11G00480 vs. NCBI_GenBank
Match: GBG30713.1 (Nucleoside diphosphate-linked moiety X motif 8 [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 95.5 bits (236), Expect = 3.400e-16
Identity = 64/183 (34.97%), Postives = 86/183 (46.99%), Query Frame = 0
Query:  150 RHAAVLIPLCNAHGQASVLFQIRTSTVRTHKGQVSFPGGHLNPNETPVQAALREFHXXXXXXXXXXXXXXXXXXFGPITILTACQPLPAVTGTVVHPFLAFIHRDVGDLS-----CFKPCCGEVASLFCLSLPQLLDPTLAGREDLPDTREGGRSRRLDMPFFN-GGPAKVWGLTAFIMDGVL 327
            R AA  + LCN  G+A++L  +R+  V TH GQVSFPGGH++  ETP +A +RE H                        L     + AVTGT+V P L +I  D G+LS            EV   F + +  LLD      E+L        S R  MP F  G    +WGLT F++DG++
Sbjct:   44 REAATCVALCNVDGEAAMLLTLRSQAVSTHAGQVSFPGGHIDQGETPEEACIRELHEETGLRSQP---------------LARWHNVRAVTGTMVTPVLCYI--DPGELSSDDVKTATDVSVEVDKCFSVRVSDLLDERHRSLEEL--------SGRWSMPRFEIGDNPPIWGLTGFMVDGIM 201          
BLAST of NO11G00480 vs. NCBI_GenBank
Match: EPB86233.1 (hypothetical protein HMPREF1544_06961 [Mucor circinelloides f. circinelloides 1006PhL])

HSP 1 Score: 94.7 bits (234), Expect = 5.900e-16
Identity = 62/181 (34.25%), Postives = 95/181 (52.49%), Query Frame = 0
Query:  150 RHAAVLIPLCNAHGQASVLFQIRTSTVRTHKGQVSFPGGHLNPNETPVQ-AALREFHXXXXXXXXXXXXXXXXXXFGPITILTACQPLPAVTGTV-VHPFLAFIHRDVGDLSCFKPCCGEVASLFCLSLPQLLDPTLAGREDLPDTREGGRSRRLDMPFFNGGPAKVWGLTAFIMDGVLAR 329
            + AAVL+PLC   G+ S+LF +R   +RTH G++SFPGG  + ++   Q  ALRE                       I IL     LP  TG++ V+P++ FI +D  DL+ F P   EV+S+F L +  L+ P +   +   D++   +     +P    G  ++WGLT+FI+DGVL +
Sbjct:   37 KDAAVLVPLCVVEGKPSILFTVRNINMRTHSGEISFPGGKTDDSDPSTQFTALRETKEEIGIDPE------------SIDILGCYSALPNKTGSLKVYPYVGFI-KDQVDLTRFNP--EEVSSVFTLPVDYLIQPQVRQIKQFRDSKI--KYTEFKVPEHIEGEKQIWGLTSFILDGVLRK 200          
BLAST of NO11G00480 vs. NCBI_GenBank
Match: CEP16561.1 (hypothetical protein [Parasitella parasitica])

HSP 1 Score: 94.4 bits (233), Expect = 7.700e-16
Identity = 61/181 (33.70%), Postives = 93/181 (51.38%), Query Frame = 0
Query:  150 RHAAVLIPLCNAHGQASVLFQIRTSTVRTHKGQVSFPGGHLNPNETPVQ-AALREFHXXXXXXXXXXXXXXXXXXFGPITILTACQPLPAVTGTV-VHPFLAFIHRDVGDLSCFKPCCGEVASLFCLSLPQLLDPTLAGREDLPDTREGGRSRRLDMPFFNGGPAKVWGLTAFIMDGVLAR 329
            + AAVL+PLC   G+ S+LF +R   +RTH G++SFPGG  + ++   +  ALRE +                   G + IL     LP  TG++ V+P++ FI   V DLS F     EV+S+F L +  L  P +       D++   +     +P    G  ++WGLT+FI+DGVL +
Sbjct:   37 KDAAVLVPLCVVDGKPSILFTVRNINMRTHSGEISFPGGKTDESDPSTEYTALREANEEIGLDS------------GSVDILGCYSALPNKTGSLKVYPYVGFIKNQV-DLSKFN--ADEVSSVFTLPIDYLTQPDIRQLRQFRDSK--FKYTEFKVPDHIEGEKQIWGLTSFILDGVLRK 200          
The following BLAST results are available for this feature:
BLAST of NO11G00480 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
CEL94097.14.000e-3347.49unnamed protein product [Vitrella brassicaformis C... [more]
XP_016610787.14.300e-1938.46hypothetical protein SPPG_01831 [Spizellomyces pun... [more]
XP_018288513.11.800e-1738.25hypothetical protein PHYBLDRAFT_135145 [Phycomyces... [more]
XP_013234183.15.300e-1730.00hypothetical protein, conserved [Eimeria tenella] ... [more]
OGQ24499.11.200e-1638.42hypothetical protein A2138_15890 [Deltaproteobacte... [more]
CDS06536.12.600e-1633.68hypothetical protein LRAMOSA09064 [Lichtheimia ram... [more]
GAN03471.13.400e-1633.70nudix hydrolase 3 [Mucor ambiguus][more]
GBG30713.13.400e-1634.97Nucleoside diphosphate-linked moiety X motif 8 [Au... [more]
EPB86233.15.900e-1634.25hypothetical protein HMPREF1544_06961 [Mucor circi... [more]
CEP16561.17.700e-1633.70hypothetical protein [Parasitella parasitica][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR067ncniR067Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR018ngnoR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO11G00480.1NO11G00480.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO11G00480.1NO11G00480.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO11G00480 ID=NO11G00480|Name=NO11G00480|organism=Nannochloropsis oceanica|type=gene|length=1573bp
AAAAGGCCTATCCAAAAGCTGGCGCGCTGTGCGGTGCATTCGCATCGTTC
CCTCCCTCCCTGCCTGCACCTCTTCTTTCTCCTCGCCTTCTTACTGCACG
ACTCGACCATGGTCTTGACTCTTTGCCTTCGCCCCCGGCTCTTGTCACAC
GCCGGCAGGAGTGGCAGCTGCAGTAGTAGTAGCAGCAGCACCACTGTGCG
CCTCCTTTCTTCGCCATCTTCAACAACCTCTTCCTCATCCCTCTCCTCCT
CCTCTTCCTCTTCACCGTCATCGTCCTCCTCCGCTTCCACTTCTTCCTCT
TCACCTCCCCCCCACCCACCCCACAATCATTCCTATTCCCTTATCACGTT
CGATGATGTCCTCCTTCACAAAATCACGCAGCGAATCGCCTCATTCTCCG
GGAAGCCCATCCCCCTCCTTCCTCCCTCCCGTCCACTTTCCTCCTCCTCA
GCCGCCGCCTCCTCCTCCTCCTCCTCCTCCTCGTCGTTGTCGTCGTCGTC
GTTGTCGTCGTCGTCGAGTCACGGTGACAATCTGACCAGCAGCACCACTC
CAACGCGCCACGCCGCTGTCTTAATCCCCCTGTGCAATGCGCATGGGCAA
GCCTCCGTTCTCTTCCAAATACGCACTTCTACCGTCAGAACACACAAAGG
ACAGGTCTCCTTgtaagttttattatgctttccatatcgttttcagtgat
caacaattttcctaccgtttactcgctctccttctccttcttggggttct
actttctcttttatctttccctggttcaatgaaaatcgtctccaacacac
tccctctcgtcatccctccttccctccctccccccccccccctctctctc
tctctctctctctctctccctaacccagCCCTGGCGGCCATCTCAACCCC
AACGAGACCCCTGTGCAAGCCGCACTACGAGAATTTCACGAGGAAATGAG
CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTGATGGAGGAGGCTTTGGGC
CTATCACCATTCTGACAGCTTGTCAGCCCTTGCCGGCAGTCACAGgtggg
aaggtcatccctccttccttccctccttccctcccttcttccctccctcc
ttcccttcctccccctttttctccctcccctttggccatcgctgtgcgtg
ctcaccagtttttctcccccttgacagccactgggcatttaatcctcctt
tcctttccccatccttccctcccgccctccttccctccctccctcagGCA
CCGTCGTACACCCATTCCTCGCCTTCATCCACCGGGATGTGGGCGACCTC
TCCTGCTTCAAGCCCTGCTGCGGAGAGGTGGCAAGCCTCTTCTGCCTCTC
CCTCCCTCAGCTCCTCGATCCGACTCTTGCCGGCCGCGAAGACCTGCCCG
ACACAAGGGAGGGAGGGAGGAGCAGAAGATTGGACATGCCGTTTTTTAAC
GGGGGGCCGGCAAAGGTTTGGGGGCTAACGGCTTTTATAATGGATGGCGT
GCTGGCGAGGGTGTTGCGGCCGTGCTTGGAAGGAGGGAGGGAGGGAGGGA
GGGAGGGAGGGAGGGAGGAGTGA
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protein sequence of NO11G00480.1

>NO11G00480.1-protein ID=NO11G00480.1-protein|Name=NO11G00480.1|organism=Nannochloropsis oceanica|type=polypeptide|length=349bp
MVLTLCLRPRLLSHAGRSGSCSSSSSSTTVRLLSSPSSTTSSSSLSSSSS
SSPSSSSSASTSSSSPPPHPPHNHSYSLITFDDVLLHKITQRIASFSGKP
IPLLPPSRPLSSSSAAASSSSSSSSSLSSSSLSSSSSHGDNLTSSTTPTR
HAAVLIPLCNAHGQASVLFQIRTSTVRTHKGQVSFPGGHLNPNETPVQAA
LREFHEEMSSSSSSSSSSSDGGGFGPITILTACQPLPAVTGTVVHPFLAF
IHRDVGDLSCFKPCCGEVASLFCLSLPQLLDPTLAGREDLPDTREGGRSR
RLDMPFFNGGPAKVWGLTAFIMDGVLARVLRPCLEGGREGGREGGREE*
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Synonyms
Publications