NO11G00450, NO11G00450 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO11G00450 vs. NCBI_GenBank
Match: CBN78750.1 (Rab3 GTPase-activating protein, non-catalytic subunit, distant homolog [Ectocarpus siliculosus]) HSP 1 Score: 118.2 bits (295), Expect = 2.400e-22 Identity = 64/143 (44.76%), Postives = 84/143 (58.74%), Query Frame = 0
Query: 463 LNRDIDLRDRRRRCLSASLGPNGRLVAVTDALGRVLVIDVHTRQVLRLFKGHRGAQVAWLESLEGWPGQ------EKG---------APMPRFFPRVLPPALVLGLYLVIYSPARGMLEVWRMRHGPCVKVFSVPPGLQLVTS 591
L+ D L+D RR LGP+GRL A D GRV+++D TRQ+LR++KG R A+ WLE +E W G+ KG AP + V V+GLYL I +P RG +E+WRMRHGPCV+V S P G +L+TS
Sbjct: 258 LHWDGGLQDGWRRVSRLFLGPSGRLAAAADGFGRVMLVDCATRQILRMWKGVRDAECGWLEVVESWEGRRVESVGRKGRFAATAAAAAPAQQPGESVAATTPVVGLYLAILAPLRGRVELWRMRHGPCVRVISAPAGARLLTS 400
BLAST of NO11G00450 vs. NCBI_GenBank
Match: ETI45689.1 (hypothetical protein F443_09831 [Phytophthora parasitica P1569]) HSP 1 Score: 100.5 bits (249), Expect = 5.100e-17 Identity = 57/134 (42.54%), Postives = 73/134 (54.48%), Query Frame = 0
Query: 458 PTPITLNRDIDLRDRRRRCLSASLGPNGRLVAVTDALGRVLVIDVHTRQVLRLFKGHRGAQVAWLESLEGWPGQEKGAPMPRFFPRVLPPALVLGLYLVIYSPARGMLEVWRMRHGPCVKVFSVPPGLQLVTSY 592
P PI R I D RRRC L P GRL AV+D LGR+L++D V+R++KG+R AQ W++ EG PP GLYLVIYS RG++EVWR R+GP V F+V +L T +
Sbjct: 326 PAPIDTTRSI-YEDERRRCRVLVLSPTGRLAAVSDTLGRILLVDTARMLVVRMWKGYRNAQCGWMQGSEG---------------ARRPP----GLYLVIYSAQRGIVEVWRARYGPRVFSFAVGNSAKLFTQF 439
BLAST of NO11G00450 vs. NCBI_GenBank
Match: ETI45690.1 (hypothetical protein, variant [Phytophthora parasitica P1569]) HSP 1 Score: 100.5 bits (249), Expect = 5.100e-17 Identity = 57/134 (42.54%), Postives = 73/134 (54.48%), Query Frame = 0
Query: 458 PTPITLNRDIDLRDRRRRCLSASLGPNGRLVAVTDALGRVLVIDVHTRQVLRLFKGHRGAQVAWLESLEGWPGQEKGAPMPRFFPRVLPPALVLGLYLVIYSPARGMLEVWRMRHGPCVKVFSVPPGLQLVTSY 592
P PI R I D RRRC L P GRL AV+D LGR+L++D V+R++KG+R AQ W++ EG PP GLYLVIYS RG++EVWR R+GP V F+V +L T +
Sbjct: 326 PAPIDTTRSI-YEDERRRCRVLVLSPTGRLAAVSDTLGRILLVDTARMLVVRMWKGYRNAQCGWMQGSEG---------------ARRPP----GLYLVIYSAQRGIVEVWRARYGPRVFSFAVGNSAKLFTQF 439
BLAST of NO11G00450 vs. NCBI_GenBank
Match: ETK85635.1 (hypothetical protein L915_09634 [Phytophthora parasitica] >ETL39068.1 hypothetical protein L916_09534 [Phytophthora parasitica]) HSP 1 Score: 100.5 bits (249), Expect = 5.100e-17 Identity = 57/134 (42.54%), Postives = 73/134 (54.48%), Query Frame = 0
Query: 458 PTPITLNRDIDLRDRRRRCLSASLGPNGRLVAVTDALGRVLVIDVHTRQVLRLFKGHRGAQVAWLESLEGWPGQEKGAPMPRFFPRVLPPALVLGLYLVIYSPARGMLEVWRMRHGPCVKVFSVPPGLQLVTSY 592
P PI R I D RRRC L P GRL AV+D LGR+L++D V+R++KG+R AQ W++ EG PP GLYLVIYS RG++EVWR R+GP V F+V +L T +
Sbjct: 326 PAPIDTTRSI-YEDERRRCRVLVLSPTGRLAAVSDTLGRILLVDTARMLVVRMWKGYRNAQCGWMQGSEG---------------ARRPP----GLYLVIYSAQRGIVEVWRARYGPRVFSFAVGNSAKLFTQF 439
BLAST of NO11G00450 vs. NCBI_GenBank
Match: ETM45485.1 (hypothetical protein L914_09503 [Phytophthora parasitica]) HSP 1 Score: 100.5 bits (249), Expect = 5.100e-17 Identity = 57/134 (42.54%), Postives = 73/134 (54.48%), Query Frame = 0
Query: 458 PTPITLNRDIDLRDRRRRCLSASLGPNGRLVAVTDALGRVLVIDVHTRQVLRLFKGHRGAQVAWLESLEGWPGQEKGAPMPRFFPRVLPPALVLGLYLVIYSPARGMLEVWRMRHGPCVKVFSVPPGLQLVTSY 592
P PI R I D RRRC L P GRL AV+D LGR+L++D V+R++KG+R AQ W++ EG PP GLYLVIYS RG++EVWR R+GP V F+V +L T +
Sbjct: 326 PAPIDTTRSI-YEDERRRCRVLVLSPTGRLAAVSDTLGRILLVDTARMLVVRMWKGYRNAQCGWMQGSEG---------------ARRPP----GLYLVIYSAQRGIVEVWRARYGPRVFSFAVGNSAKLFTQF 439
BLAST of NO11G00450 vs. NCBI_GenBank
Match: ETM45486.1 (hypothetical protein, variant [Phytophthora parasitica]) HSP 1 Score: 100.5 bits (249), Expect = 5.100e-17 Identity = 57/134 (42.54%), Postives = 73/134 (54.48%), Query Frame = 0
Query: 458 PTPITLNRDIDLRDRRRRCLSASLGPNGRLVAVTDALGRVLVIDVHTRQVLRLFKGHRGAQVAWLESLEGWPGQEKGAPMPRFFPRVLPPALVLGLYLVIYSPARGMLEVWRMRHGPCVKVFSVPPGLQLVTSY 592
P PI R I D RRRC L P GRL AV+D LGR+L++D V+R++KG+R AQ W++ EG PP GLYLVIYS RG++EVWR R+GP V F+V +L T +
Sbjct: 326 PAPIDTTRSI-YEDERRRCRVLVLSPTGRLAAVSDTLGRILLVDTARMLVVRMWKGYRNAQCGWMQGSEG---------------ARRPP----GLYLVIYSAQRGIVEVWRARYGPRVFSFAVGNSAKLFTQF 439
BLAST of NO11G00450 vs. NCBI_GenBank
Match: XP_008892847.1 (hypothetical protein PPTG_01350 [Phytophthora parasitica INRA-310] >ETN21007.1 hypothetical protein PPTG_01350 [Phytophthora parasitica INRA-310]) HSP 1 Score: 100.5 bits (249), Expect = 5.100e-17 Identity = 57/134 (42.54%), Postives = 73/134 (54.48%), Query Frame = 0
Query: 458 PTPITLNRDIDLRDRRRRCLSASLGPNGRLVAVTDALGRVLVIDVHTRQVLRLFKGHRGAQVAWLESLEGWPGQEKGAPMPRFFPRVLPPALVLGLYLVIYSPARGMLEVWRMRHGPCVKVFSVPPGLQLVTSY 592
P PI R I D RRRC L P GRL AV+D LGR+L++D V+R++KG+R AQ W++ EG PP GLYLVIYS RG++EVWR R+GP V F+V +L T +
Sbjct: 326 PAPIDTTRSI-YEDERRRCRVLVLSPTGRLAAVSDTLGRILLVDTARMLVVRMWKGYRNAQCGWMQGSEG---------------ARRPP----GLYLVIYSAQRGIVEVWRARYGPRVFSFAVGNSAKLFTQF 439
BLAST of NO11G00450 vs. NCBI_GenBank
Match: XP_008892848.1 (hypothetical protein, variant [Phytophthora parasitica INRA-310] >ETN21008.1 hypothetical protein, variant [Phytophthora parasitica INRA-310]) HSP 1 Score: 100.5 bits (249), Expect = 5.100e-17 Identity = 57/134 (42.54%), Postives = 73/134 (54.48%), Query Frame = 0
Query: 458 PTPITLNRDIDLRDRRRRCLSASLGPNGRLVAVTDALGRVLVIDVHTRQVLRLFKGHRGAQVAWLESLEGWPGQEKGAPMPRFFPRVLPPALVLGLYLVIYSPARGMLEVWRMRHGPCVKVFSVPPGLQLVTSY 592
P PI R I D RRRC L P GRL AV+D LGR+L++D V+R++KG+R AQ W++ EG PP GLYLVIYS RG++EVWR R+GP V F+V +L T +
Sbjct: 326 PAPIDTTRSI-YEDERRRCRVLVLSPTGRLAAVSDTLGRILLVDTARMLVVRMWKGYRNAQCGWMQGSEG---------------ARRPP----GLYLVIYSAQRGIVEVWRARYGPRVFSFAVGNSAKLFTQF 439
BLAST of NO11G00450 vs. NCBI_GenBank
Match: ETO74310.1 (hypothetical protein F444_09925 [Phytophthora parasitica P1976]) HSP 1 Score: 100.5 bits (249), Expect = 5.100e-17 Identity = 57/134 (42.54%), Postives = 73/134 (54.48%), Query Frame = 0
Query: 458 PTPITLNRDIDLRDRRRRCLSASLGPNGRLVAVTDALGRVLVIDVHTRQVLRLFKGHRGAQVAWLESLEGWPGQEKGAPMPRFFPRVLPPALVLGLYLVIYSPARGMLEVWRMRHGPCVKVFSVPPGLQLVTSY 592
P PI R I D RRRC L P GRL AV+D LGR+L++D V+R++KG+R AQ W++ EG PP GLYLVIYS RG++EVWR R+GP V F+V +L T +
Sbjct: 326 PAPIDTTRSI-YEDERRRCRVLVLSPTGRLAAVSDTLGRILLVDTARMLVVRMWKGYRNAQCGWMQGSEG---------------ARRPP----GLYLVIYSAQRGIVEVWRARYGPRVFSFAVGNSAKLFTQF 439
BLAST of NO11G00450 vs. NCBI_GenBank
Match: ETO74311.1 (hypothetical protein, variant [Phytophthora parasitica P1976]) HSP 1 Score: 100.5 bits (249), Expect = 5.100e-17 Identity = 57/134 (42.54%), Postives = 73/134 (54.48%), Query Frame = 0
Query: 458 PTPITLNRDIDLRDRRRRCLSASLGPNGRLVAVTDALGRVLVIDVHTRQVLRLFKGHRGAQVAWLESLEGWPGQEKGAPMPRFFPRVLPPALVLGLYLVIYSPARGMLEVWRMRHGPCVKVFSVPPGLQLVTSY 592
P PI R I D RRRC L P GRL AV+D LGR+L++D V+R++KG+R AQ W++ EG PP GLYLVIYS RG++EVWR R+GP V F+V +L T +
Sbjct: 326 PAPIDTTRSI-YEDERRRCRVLVLSPTGRLAAVSDTLGRILLVDTARMLVVRMWKGYRNAQCGWMQGSEG---------------ARRPP----GLYLVIYSAQRGIVEVWRARYGPRVFSFAVGNSAKLFTQF 439 The following BLAST results are available for this feature:
BLAST of NO11G00450 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO11G00450 ID=NO11G00450|Name=NO11G00450|organism=Nannochloropsis oceanica|type=gene|length=7015bpback to top protein sequence of NO11G00450.1 >NO11G00450.1-protein ID=NO11G00450.1-protein|Name=NO11G00450.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1659bpback to top protein sequence of NO11G00450.2 >NO11G00450.2-protein ID=NO11G00450.2-protein|Name=NO11G00450.2|organism=Nannochloropsis oceanica|type=polypeptide|length=1659bpback to top Synonyms
Publications
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