NO11G00200, NO11G00200 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO11G00200 vs. NCBI_GenBank
Match: EWM25209.1 (n-glycosylase dna lyase [Nannochloropsis gaditana]) HSP 1 Score: 362.8 bits (930), Expect = 2.200e-96 Identity = 175/210 (83.33%), Postives = 189/210 (90.00%), Query Frame = 0
Query: 319 RQDPVECLFSFICSSNNNIARIGLMLTRLRQTYGEPLGDGHYTFPSVSSLAAASEEELRGLGLGYRARFIKKTAAKLIDLGGEEWLLSLRGKGREEAQEALCAFPGVGRKVADCVALFSLDQHGAIPVDVHVWRIACRDYDLSLKDSKSLTPSIYESVGDIFRNKFGPHAGWAHSLLFAAELPMYRARLPLALQNEMLAFKKEESEGKFL 529
RQDPVECLFSFICSSNNNI RI LML RLR+TYGEPLG G++ FP +SSLA+ASEEELRGLGLGYRARFIK TA++L+DLGG EWL+SLR K REEAQ+ALCAFPGVGRKVADCVALFSLDQHGAIPVDVHVWRIACRDY LK+ KSLTP++YE+VGDIFRNKFG HAGWAHSLLFAAELP YRARLPL LQNEMLAFKKEE K L
Sbjct: 173 RQDPVECLFSFICSSNNNIPRIALMLDRLRKTYGEPLGKGYHAFPPLSSLASASEEELRGLGLGYRARFIKLTASQLLDLGGREWLMSLREKSREEAQQALCAFPGVGRKVADCVALFSLDQHGAIPVDVHVWRIACRDYSPVLKEHKSLTPAVYEAVGDIFRNKFGSHAGWAHSLLFAAELPDYRARLPLFLQNEMLAFKKEEGIEKAL 382
BLAST of NO11G00200 vs. NCBI_GenBank
Match: CEL93771.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 302.4 bits (773), Expect = 3.500e-78 Identity = 174/428 (40.65%), Postives = 228/428 (53.27%), Query Frame = 0
Query: 153 WMDLGVPAYELRPEFSLMMGQCFNWRRKIDQGIKKGKEVEEEKGGKEEGKVIEAPASXXXXXXXXXXXXXXXXXXXXXXVWVGVLDRYILEVQQTRTSTLXXXXXXXXXXXXXXXXXXXXXXXXXXARLRDYFQVGTPLAPLYATWAHGDPRMRSVADSLPGVRVVRQDPVECLFSFICSSNNNIARIGLMLTRLRQTYGEPL--------------------------------------------------GDGH--YTFPSVSSLAAASEEELRGLGLGYRARFIKKTAAKLIDLGGEEWLLSLRG--KGREEAQEALCAFPGVGRKVADCVALFSLDQHGAIPVDVHVWRIACRDYDLSLKDSKSLTPSIYESVGDIFRNKFGPHAGWAHSLLFAAELPMYRARLPLALQNEMLAFKKEESEGK 527
W DL VP EL+PEF L+ GQCF++ K E E G +EAP+ WVGV+ R + ++QT +TL A +R++F++ T +APLY W D RMR + +L G RV++QD ECLF+FICSSNNNI+RI LM+ RL++ YG+ + G G+ Y+FP++ LAAASE+ LR +GLGYRA+ + +TA L +LGGE +L L+ R+E Q+ L F GVGRKVADCV LFSLD+ AIPVD HVWRIACRD D SL+ +KSLTP++Y+ VGD+FR+++G AGWAHSLLF AELP +RARLP +LQ EM F E E K
Sbjct: 17 WTDLQVPPPELQPEFCLVSGQCFSF-----------KPCEAEAG------AVEAPSDGAGDGVSDSKE------------WVGVIGRGVYHIRQTEQTTL---------FRCLHHSRYSSDGSECVAEVREFFRLHTEMAPLYRRWEGADARMRQIVPALRGARVIQQDATECLFTFICSSNNNISRITLMIDRLKRHYGDLIATITSPTPTLTGAALQEHQDSISRDGXXXXXXXXXXXXXXXXXXXXXXHAGSGYSWYSFPTIDRLAAASEQGLRSIGLGYRAKSVVETAKALKELGGEAFLQKLKSPTMTRQEVQKELLQFRGVGRKVADCVGLFSLDRFDAIPVDTHVWRIACRDLDRSLQSAKSLTPAVYDRVGDLFRDRYGSRAGWAHSLLFTAELPAFRARLPASLQQEMSEFAVSEKEAK 406
BLAST of NO11G00200 vs. NCBI_GenBank
Match: CBJ27158.1 (endonuclease III/similar to 8-oxoguanine DNA glycosylase isoform 1b [Ectocarpus siliculosus]) HSP 1 Score: 300.4 bits (768), Expect = 1.300e-77 Identity = 168/389 (43.19%), Postives = 215/389 (55.27%), Query Frame = 0
Query: 146 REGVRGNWMDLGVPAYELRPEFSLMMGQCFNWRRKIDQGIKKGKEVEEEKGGKEEGKVIEAPASXXXXXXXXXXXXXXXXXXXXXXVWVGVLDRYILEVQQTRTSTLXXXXXXXXXXXXXXXXXXXXXXXXXXARLRDYFQVGTPLAPLYATWAHGDPRMRSVADSLPGVRVVRQDPVECLFSFICSSNNNIARIGLMLTRLRQTYGEPL---GDGH-----------------------YTFPSVSSLAA-ASEEELRGLGLGYRARFIKKTAAKLIDLGGEEWLLSLRGKGREEAQEALCAFPGVGRKVADCVALFSLDQHGAIPVDVHVWRIACRDYDLSLKDSKSLTPSIYESVGDIFRNKFGPHAGWAHSLLFAAELPMYRARL 508
++ + G W DL VP ELRP+ +L +GQCFNWR+ WVGVL R ++ ++QT +TL LR+YF + TPLAPLY W+ GDPRM +VA S+ GVRVVRQDPVEC+FSFICSSNNNI RI ML +LR+TYG+ L G G ++FP+V +LA A+E +LR +G GYRA++I +A + GG W L +R K R+E + L GVG KVADC+ALFSLDQ IPVDVHVWRIACRDYD +L + KSLTP++Y VG++FR++FG AGWAHSLLFAAELP ++A+L
Sbjct: 31 KQPLDGLWHDLCVPPEELRPDSTLTVGQCFNWRQ------------------------------------------------AGADCWVGVLGREVIAIRQTPCTTL------FRSLSAVTTDGDAKVAAALATTLREYFFLRTPLAPLYQRWSEGDPRMAAVACSISGVRVVRQDPVECIFSFICSSNNNIPRITGMLGKLRRTYGDLLLNVGKGGLAATGALGNITECEEWAKLPLELHSFPTVDALATRATEADLRAMGFGYRAKYIVDSAKLMHSNGGAGWALDMRNKDRDEVRSQLVTLCGVGPKVADCIALFSLDQASTIPVDVHVWRIACRDYDPTLVECKSLTPTVYARVGNLFRDRFGDRAGWAHSLLFAAELPGFKAKL 365
BLAST of NO11G00200 vs. NCBI_GenBank
Match: GAX21501.1 (N-glycosylase/DNA lyase [Fistulifera solaris]) HSP 1 Score: 270.8 bits (691), Expect = 1.100e-68 Identity = 164/390 (42.05%), Postives = 213/390 (54.62%), Query Frame = 0
Query: 155 DLGVPAYELRPEFSLMMGQCFNWRRKIDQGIKKGKEVEEEKGGKEEGKVIEAPASXXXXXXXXXXXXXXXXXXXXXXVWVGVL------DRYILEVQQTRTSTLXXXXXXXXXXXXXXXXXXXXXXXXXXARLRDYFQVGTPLAPLYATWAHGDPRMRSVADSLPGVRVVRQDPVECLFSFICSSNNNIARIGLMLTRLRQTYGEPL-----GDGH----YTFPSVSSLAA-ASEEELRGL-GLGYRARFIKKTAAKLIDLGGEEWLLSLRG-KGREEAQEALCAFPGVGRKVADCVALFSLDQHGAIPVDVHVWRIACRDYDLSLKDSKSLTPSIYESVGDIFRNKFGPHAGWAHSLLFAAELPMYRARLPLALQNEMLAFKKEESEGK 527
DL VPA ELRP +L GQCF+W K V+E G G W+G + D +L +++T +TL L YFQ+ L+ LY W+H R++ +A +PGVRV+ QDP ECL SF+CSSNNNI RI ML ++R+TYG PL DG+ Y+FPS L A ASE+ELR + G+GYRA+++ T K+ GE +L SLRG K + QEAL FPGVGRKVADC+ALFSL Q AIPVDVHVW +A RDY + + KSLTP++Y +VGD+FR +F H+GWAHSLLF AELP +R LP ++ EM +F K+ + K
Sbjct: 73 DLKVPARELRPSATLTTGQCFHW-----------KAVDEPVGSSAWG-------------------------THNATQWIGTVRIPDTSDYLVLLLRETIDTTLYKVLFAPPDYDIVKTDDV----------LYQYFQLDQSLSVLYDQWSHECSRLKRIAACIPGVRVICQDPWECLVSFLCSSNNNIPRIFGMLAKIRRTYGRPLLTLRTSDGNEETFYSFPSFEQLVAKASEDELRNVCGMGYRAKYLLGTMEKIKAASGEPYLNSLRGVKSPLDVQEALIQFPGVGRKVADCIALFSLRQTEAIPVDVHVWDMARRDYAFNTSNVKSLTPTVYRAVGDLFRERFSTHSGWAHSLLFVAELPSFRPVLPSDIREEMESFSKKRNAEK 416
BLAST of NO11G00200 vs. NCBI_GenBank
Match: ETK86866.1 (hypothetical protein L915_08576 [Phytophthora parasitica]) HSP 1 Score: 255.4 bits (651), Expect = 4.900e-64 Identity = 132/249 (53.01%), Postives = 164/249 (65.86%), Query Frame = 0
Query: 281 LRDYFQVGTPLAPLYATWAHGDPRMRSVADSLPGVRVVRQDPVECLFSFICSSNNNIARIGLMLTRLRQTYGE---PLGDGH------YTFPSVSSLAAASEE-ELRGLGLGYRARFIKKTAAKLIDLGGEEWLLSLRG------KGREEA-----QEALCAFPGVGRKVADCVALFSLDQHGAIPVDVHVWRIACRDYDLSLKDSKSLTPSIYESVGDIFRNKFGPHAGWAHSLLFAAELPMYRARLP 509
L YF++ TP PLY W RM + L G+R+VRQDPVECLFSFICSSNNNI RI M+ +L+ TYG+ LG+G Y FPSV +LAA EE LR LG GYRA FI KTA +L +LGG +L ++R G +E Q+ L F GVGRKVADCVALFSL++ AIPVD HVW+IACR+ D +L D KS+TPS+Y VGD+FR +F P AGWAHS+LFA +L ++ +P
Sbjct: 126 LSHYFRLDTPADPLYERWTKPTDRMTEIISRLRGLRIVRQDPVECLFSFICSSNNNITRIQGMVDKLKATYGDLLYKLGEGEEQQQPFYAFPSVDTLAAKCEEATLRALGFGYRAAFIVKTAKQLQELGGASYLNNIRDTKNVRQSGEKEVSYHAYQDELMVFSGVGRKVADCVALFSLEKLEAIPVDTHVWQIACRELDSTLSDRKSITPSVYRMVGDLFRTRFAPQAGWAHSVLFAGDLSAFKPTIP 374
BLAST of NO11G00200 vs. NCBI_GenBank
Match: XP_008905592.1 (hypothetical protein PPTG_11092 [Phytophthora parasitica INRA-310] >ETI46944.1 hypothetical protein F443_08748 [Phytophthora parasitica P1569] >ETN09031.1 hypothetical protein PPTG_11092 [Phytophthora parasitica INRA-310] >KUF88136.1 valine--tRNA ligase [Phytophthora nicotianae] >KUG01534.1 Endonuclease III [Phytophthora nicotianae]) HSP 1 Score: 255.0 bits (650), Expect = 6.400e-64 Identity = 132/249 (53.01%), Postives = 164/249 (65.86%), Query Frame = 0
Query: 281 LRDYFQVGTPLAPLYATWAHGDPRMRSVADSLPGVRVVRQDPVECLFSFICSSNNNIARIGLMLTRLRQTYGE---PLGDGH------YTFPSVSSLAAASEE-ELRGLGLGYRARFIKKTAAKLIDLGGEEWL------LSLRGKGREEA-----QEALCAFPGVGRKVADCVALFSLDQHGAIPVDVHVWRIACRDYDLSLKDSKSLTPSIYESVGDIFRNKFGPHAGWAHSLLFAAELPMYRARLP 509
L YF++ TP PLY W RM + L G+R+VRQDPVECLFSFICSSNNNI RI M+ +L+ TYG+ LG+G Y FPSV +LAA EE LR LG GYRA FI KTA +L +LGG +L ++R G +E Q+ L F GVGRKVADCVALFSL++ AIPVD HVW+IACR+ D +L D KS+TPS+Y VGD+FR +F P AGWAHS+LFA +L ++ +P
Sbjct: 126 LSHYFRLDTPADPLYERWTKPTDRMTEIISRLRGLRIVRQDPVECLFSFICSSNNNITRIQGMVDKLKATYGDLLYKLGEGEEQQQPFYAFPSVDTLAAKCEEATLRALGFGYRAAFIVKTAKQLQELGGASYLDNIRDTKNVRQSGEKEVSYHAYQDELMVFSGVGRKVADCVALFSLEKLEAIPVDTHVWQIACRELDSTLSDRKSITPSVYRMVGDLFRTRFAPQAGWAHSVLFAGDLSAFKPTIP 374
BLAST of NO11G00200 vs. NCBI_GenBank
Match: ETL40279.1 (hypothetical protein L916_08506 [Phytophthora parasitica]) HSP 1 Score: 255.0 bits (650), Expect = 6.400e-64 Identity = 132/249 (53.01%), Postives = 164/249 (65.86%), Query Frame = 0
Query: 281 LRDYFQVGTPLAPLYATWAHGDPRMRSVADSLPGVRVVRQDPVECLFSFICSSNNNIARIGLMLTRLRQTYGE---PLGDGH------YTFPSVSSLAAASEE-ELRGLGLGYRARFIKKTAAKLIDLGGEEWL------LSLRGKGREEA-----QEALCAFPGVGRKVADCVALFSLDQHGAIPVDVHVWRIACRDYDLSLKDSKSLTPSIYESVGDIFRNKFGPHAGWAHSLLFAAELPMYRARLP 509
L YF++ TP PLY W RM + L G+R+VRQDPVECLFSFICSSNNNI RI M+ +L+ TYG+ LG+G Y FPSV +LAA EE LR LG GYRA FI KTA +L +LGG +L ++R G +E Q+ L F GVGRKVADCVALFSL++ AIPVD HVW+IACR+ D +L D KS+TPS+Y VGD+FR +F P AGWAHS+LFA +L ++ +P
Sbjct: 126 LSHYFRLDTPADPLYERWTKPTDRMTEIISRLRGLRIVRQDPVECLFSFICSSNNNITRIQGMVDKLKATYGDLLYKLGEGEEQQQPFYAFPSVDTLAAKCEEATLRALGFGYRAAFIVKTAKQLQELGGASYLDNIRDTKNVRQSGEKEVSYHAYQDELMVFSGVGRKVADCVALFSLEKLEAIPVDTHVWQIACRELDSTLSDRKSITPSVYRMVGDLFRTRFAPQAGWAHSVLFAGDLSAFKPTIP 374
BLAST of NO11G00200 vs. NCBI_GenBank
Match: ETL93427.1 (hypothetical protein L917_08405 [Phytophthora parasitica]) HSP 1 Score: 255.0 bits (650), Expect = 6.400e-64 Identity = 132/249 (53.01%), Postives = 164/249 (65.86%), Query Frame = 0
Query: 281 LRDYFQVGTPLAPLYATWAHGDPRMRSVADSLPGVRVVRQDPVECLFSFICSSNNNIARIGLMLTRLRQTYGE---PLGDGH------YTFPSVSSLAAASEE-ELRGLGLGYRARFIKKTAAKLIDLGGEEWL------LSLRGKGREEA-----QEALCAFPGVGRKVADCVALFSLDQHGAIPVDVHVWRIACRDYDLSLKDSKSLTPSIYESVGDIFRNKFGPHAGWAHSLLFAAELPMYRARLP 509
L YF++ TP PLY W RM + L G+R+VRQDPVECLFSFICSSNNNI RI M+ +L+ TYG+ LG+G Y FPSV +LAA EE LR LG GYRA FI KTA +L +LGG +L ++R G +E Q+ L F GVGRKVADCVALFSL++ AIPVD HVW+IACR+ D +L D KS+TPS+Y VGD+FR +F P AGWAHS+LFA +L ++ +P
Sbjct: 126 LSHYFRLDTPADPLYERWTKPTDRMTEIISRLRGLRIVRQDPVECLFSFICSSNNNITRIQGMVDKLKATYGDLLYKLGEGEEQQQPFYAFPSVDTLAAKCEEATLRALGFGYRAAFIVKTAKQLQELGGASYLDNIRDTKNVRQSGEKEVSYHAYQDELMVFSGVGRKVADCVALFSLEKLEAIPVDTHVWQIACRELDSTLSDRKSITPSVYRMVGDLFRTRFAPQAGWAHSVLFAGDLSAFKPTIP 374
BLAST of NO11G00200 vs. NCBI_GenBank
Match: ETM46685.1 (hypothetical protein L914_08463 [Phytophthora parasitica]) HSP 1 Score: 255.0 bits (650), Expect = 6.400e-64 Identity = 132/249 (53.01%), Postives = 164/249 (65.86%), Query Frame = 0
Query: 281 LRDYFQVGTPLAPLYATWAHGDPRMRSVADSLPGVRVVRQDPVECLFSFICSSNNNIARIGLMLTRLRQTYGE---PLGDGH------YTFPSVSSLAAASEE-ELRGLGLGYRARFIKKTAAKLIDLGGEEWL------LSLRGKGREEA-----QEALCAFPGVGRKVADCVALFSLDQHGAIPVDVHVWRIACRDYDLSLKDSKSLTPSIYESVGDIFRNKFGPHAGWAHSLLFAAELPMYRARLP 509
L YF++ TP PLY W RM + L G+R+VRQDPVECLFSFICSSNNNI RI M+ +L+ TYG+ LG+G Y FPSV +LAA EE LR LG GYRA FI KTA +L +LGG +L ++R G +E Q+ L F GVGRKVADCVALFSL++ AIPVD HVW+IACR+ D +L D KS+TPS+Y VGD+FR +F P AGWAHS+LFA +L ++ +P
Sbjct: 126 LSHYFRLDTPADPLYERWTKPTDRMTEIISRLRGLRIVRQDPVECLFSFICSSNNNITRIQGMVDKLKATYGDLLYKLGEGEEQQQPFYAFPSVDTLAAKCEEATLRALGFGYRAAFIVKTAEQLQELGGASYLDNIRDTKNVRQSGEKEVSYHAYQDELMVFSGVGRKVADCVALFSLEKLEAIPVDTHVWQIACRELDSTLSDRKSITPSVYRMVGDLFRTRFAPQAGWAHSVLFAGDLSAFKPTIP 374
BLAST of NO11G00200 vs. NCBI_GenBank
Match: ETO75675.1 (hypothetical protein F444_08802 [Phytophthora parasitica P1976]) HSP 1 Score: 255.0 bits (650), Expect = 6.400e-64 Identity = 132/249 (53.01%), Postives = 164/249 (65.86%), Query Frame = 0
Query: 281 LRDYFQVGTPLAPLYATWAHGDPRMRSVADSLPGVRVVRQDPVECLFSFICSSNNNIARIGLMLTRLRQTYGE---PLGDGH------YTFPSVSSLAAASEE-ELRGLGLGYRARFIKKTAAKLIDLGGEEWL------LSLRGKGREEA-----QEALCAFPGVGRKVADCVALFSLDQHGAIPVDVHVWRIACRDYDLSLKDSKSLTPSIYESVGDIFRNKFGPHAGWAHSLLFAAELPMYRARLP 509
L YF++ TP PLY W RM + L G+R+VRQDPVECLFSFICSSNNNI RI M+ +L+ TYG+ LG+G Y FPSV +LAA EE LR LG GYRA FI KTA +L +LGG +L ++R G +E Q+ L F GVGRKVADCVALFSL++ AIPVD HVW+IACR+ D +L D KS+TPS+Y VGD+FR +F P AGWAHS+LFA +L ++ +P
Sbjct: 126 LSHYFRLDTPADPLYERWTKPTDRMTEIISRLRGLRIVRQDPVECLFSFICSSNNNITRIQGMVDKLKATYGDLLYKLGEGEEQQQPFYAFPSVDTLAAKCEEATLRALGFGYRAAFIVKTAKQLQELGGASYLDNIRDTKNVRQSGEKEVSYHAYQDELMVFSGVGRKVADCVALFSLEKLEAIPVDTHVWQIACRELDSTLSDRKSITPSVYRMVGDLFRTRFAPQAGWAHSVLFAGDLSAFKPTIP 374 The following BLAST results are available for this feature:
BLAST of NO11G00200 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO11G00200 ID=NO11G00200|Name=NO11G00200|organism=Nannochloropsis oceanica|type=gene|length=3630bpback to top protein sequence of NO11G00200.1 >NO11G00200.1-protein ID=NO11G00200.1-protein|Name=NO11G00200.1|organism=Nannochloropsis oceanica|type=polypeptide|length=662bpback to top Synonyms
Publications
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