NO11G00200, NO11G00200 (gene) Nannochloropsis oceanica

Overview
NameNO11G00200
Unique NameNO11G00200
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3630
Alignment locationchr11:82672..86301 +

Link to JBrowse

Properties
Property NameValue
DescriptionN-glycosylase dna lyase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr11genomechr11:82672..86301 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
GO:0006289nucleotide-excision repair
GO:0006284base-excision repair
GO:0006950response to stress
GO:0006259DNA metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0003684damaged DNA binding
GO:0008534oxidized purine nucleobase lesion DNA N-glycosylase activity
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR011257DNA_glycosylase
IPR012904OGG_N
IPR003265HhH-GPD_domain
Homology
BLAST of NO11G00200 vs. NCBI_GenBank
Match: EWM25209.1 (n-glycosylase dna lyase [Nannochloropsis gaditana])

HSP 1 Score: 362.8 bits (930), Expect = 2.200e-96
Identity = 175/210 (83.33%), Postives = 189/210 (90.00%), Query Frame = 0
Query:  319 RQDPVECLFSFICSSNNNIARIGLMLTRLRQTYGEPLGDGHYTFPSVSSLAAASEEELRGLGLGYRARFIKKTAAKLIDLGGEEWLLSLRGKGREEAQEALCAFPGVGRKVADCVALFSLDQHGAIPVDVHVWRIACRDYDLSLKDSKSLTPSIYESVGDIFRNKFGPHAGWAHSLLFAAELPMYRARLPLALQNEMLAFKKEESEGKFL 529
            RQDPVECLFSFICSSNNNI RI LML RLR+TYGEPLG G++ FP +SSLA+ASEEELRGLGLGYRARFIK TA++L+DLGG EWL+SLR K REEAQ+ALCAFPGVGRKVADCVALFSLDQHGAIPVDVHVWRIACRDY   LK+ KSLTP++YE+VGDIFRNKFG HAGWAHSLLFAAELP YRARLPL LQNEMLAFKKEE   K L
Sbjct:  173 RQDPVECLFSFICSSNNNIPRIALMLDRLRKTYGEPLGKGYHAFPPLSSLASASEEELRGLGLGYRARFIKLTASQLLDLGGREWLMSLREKSREEAQQALCAFPGVGRKVADCVALFSLDQHGAIPVDVHVWRIACRDYSPVLKEHKSLTPAVYEAVGDIFRNKFGSHAGWAHSLLFAAELPDYRARLPLFLQNEMLAFKKEEGIEKAL 382          
BLAST of NO11G00200 vs. NCBI_GenBank
Match: CEL93771.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 302.4 bits (773), Expect = 3.500e-78
Identity = 174/428 (40.65%), Postives = 228/428 (53.27%), Query Frame = 0
Query:  153 WMDLGVPAYELRPEFSLMMGQCFNWRRKIDQGIKKGKEVEEEKGGKEEGKVIEAPASXXXXXXXXXXXXXXXXXXXXXXVWVGVLDRYILEVQQTRTSTLXXXXXXXXXXXXXXXXXXXXXXXXXXARLRDYFQVGTPLAPLYATWAHGDPRMRSVADSLPGVRVVRQDPVECLFSFICSSNNNIARIGLMLTRLRQTYGEPL--------------------------------------------------GDGH--YTFPSVSSLAAASEEELRGLGLGYRARFIKKTAAKLIDLGGEEWLLSLRG--KGREEAQEALCAFPGVGRKVADCVALFSLDQHGAIPVDVHVWRIACRDYDLSLKDSKSLTPSIYESVGDIFRNKFGPHAGWAHSLLFAAELPMYRARLPLALQNEMLAFKKEESEGK 527
            W DL VP  EL+PEF L+ GQCF++           K  E E G       +EAP+                        WVGV+ R +  ++QT  +TL                          A +R++F++ T +APLY  W   D RMR +  +L G RV++QD  ECLF+FICSSNNNI+RI LM+ RL++ YG+ +                                                  G G+  Y+FP++  LAAASE+ LR +GLGYRA+ + +TA  L +LGGE +L  L+     R+E Q+ L  F GVGRKVADCV LFSLD+  AIPVD HVWRIACRD D SL+ +KSLTP++Y+ VGD+FR+++G  AGWAHSLLF AELP +RARLP +LQ EM  F   E E K
Sbjct:   17 WTDLQVPPPELQPEFCLVSGQCFSF-----------KPCEAEAG------AVEAPSDGAGDGVSDSKE------------WVGVIGRGVYHIRQTEQTTL---------FRCLHHSRYSSDGSECVAEVREFFRLHTEMAPLYRRWEGADARMRQIVPALRGARVIQQDATECLFTFICSSNNNISRITLMIDRLKRHYGDLIATITSPTPTLTGAALQEHQDSISRDGXXXXXXXXXXXXXXXXXXXXXXHAGSGYSWYSFPTIDRLAAASEQGLRSIGLGYRAKSVVETAKALKELGGEAFLQKLKSPTMTRQEVQKELLQFRGVGRKVADCVGLFSLDRFDAIPVDTHVWRIACRDLDRSLQSAKSLTPAVYDRVGDLFRDRYGSRAGWAHSLLFTAELPAFRARLPASLQQEMSEFAVSEKEAK 406          
BLAST of NO11G00200 vs. NCBI_GenBank
Match: CBJ27158.1 (endonuclease III/similar to 8-oxoguanine DNA glycosylase isoform 1b [Ectocarpus siliculosus])

HSP 1 Score: 300.4 bits (768), Expect = 1.300e-77
Identity = 168/389 (43.19%), Postives = 215/389 (55.27%), Query Frame = 0
Query:  146 REGVRGNWMDLGVPAYELRPEFSLMMGQCFNWRRKIDQGIKKGKEVEEEKGGKEEGKVIEAPASXXXXXXXXXXXXXXXXXXXXXXVWVGVLDRYILEVQQTRTSTLXXXXXXXXXXXXXXXXXXXXXXXXXXARLRDYFQVGTPLAPLYATWAHGDPRMRSVADSLPGVRVVRQDPVECLFSFICSSNNNIARIGLMLTRLRQTYGEPL---GDGH-----------------------YTFPSVSSLAA-ASEEELRGLGLGYRARFIKKTAAKLIDLGGEEWLLSLRGKGREEAQEALCAFPGVGRKVADCVALFSLDQHGAIPVDVHVWRIACRDYDLSLKDSKSLTPSIYESVGDIFRNKFGPHAGWAHSLLFAAELPMYRARL 508
            ++ + G W DL VP  ELRP+ +L +GQCFNWR+                                                     WVGVL R ++ ++QT  +TL                            LR+YF + TPLAPLY  W+ GDPRM +VA S+ GVRVVRQDPVEC+FSFICSSNNNI RI  ML +LR+TYG+ L   G G                        ++FP+V +LA  A+E +LR +G GYRA++I  +A  +   GG  W L +R K R+E +  L    GVG KVADC+ALFSLDQ   IPVDVHVWRIACRDYD +L + KSLTP++Y  VG++FR++FG  AGWAHSLLFAAELP ++A+L
Sbjct:   31 KQPLDGLWHDLCVPPEELRPDSTLTVGQCFNWRQ------------------------------------------------AGADCWVGVLGREVIAIRQTPCTTL------FRSLSAVTTDGDAKVAAALATTLREYFFLRTPLAPLYQRWSEGDPRMAAVACSISGVRVVRQDPVECIFSFICSSNNNIPRITGMLGKLRRTYGDLLLNVGKGGLAATGALGNITECEEWAKLPLELHSFPTVDALATRATEADLRAMGFGYRAKYIVDSAKLMHSNGGAGWALDMRNKDRDEVRSQLVTLCGVGPKVADCIALFSLDQASTIPVDVHVWRIACRDYDPTLVECKSLTPTVYARVGNLFRDRFGDRAGWAHSLLFAAELPGFKAKL 365          
BLAST of NO11G00200 vs. NCBI_GenBank
Match: GAX21501.1 (N-glycosylase/DNA lyase [Fistulifera solaris])

HSP 1 Score: 270.8 bits (691), Expect = 1.100e-68
Identity = 164/390 (42.05%), Postives = 213/390 (54.62%), Query Frame = 0
Query:  155 DLGVPAYELRPEFSLMMGQCFNWRRKIDQGIKKGKEVEEEKGGKEEGKVIEAPASXXXXXXXXXXXXXXXXXXXXXXVWVGVL------DRYILEVQQTRTSTLXXXXXXXXXXXXXXXXXXXXXXXXXXARLRDYFQVGTPLAPLYATWAHGDPRMRSVADSLPGVRVVRQDPVECLFSFICSSNNNIARIGLMLTRLRQTYGEPL-----GDGH----YTFPSVSSLAA-ASEEELRGL-GLGYRARFIKKTAAKLIDLGGEEWLLSLRG-KGREEAQEALCAFPGVGRKVADCVALFSLDQHGAIPVDVHVWRIACRDYDLSLKDSKSLTPSIYESVGDIFRNKFGPHAGWAHSLLFAAELPMYRARLPLALQNEMLAFKKEESEGK 527
            DL VPA ELRP  +L  GQCF+W           K V+E  G    G                               W+G +      D  +L +++T  +TL                            L  YFQ+   L+ LY  W+H   R++ +A  +PGVRV+ QDP ECL SF+CSSNNNI RI  ML ++R+TYG PL      DG+    Y+FPS   L A ASE+ELR + G+GYRA+++  T  K+    GE +L SLRG K   + QEAL  FPGVGRKVADC+ALFSL Q  AIPVDVHVW +A RDY  +  + KSLTP++Y +VGD+FR +F  H+GWAHSLLF AELP +R  LP  ++ EM +F K+ +  K
Sbjct:   73 DLKVPARELRPSATLTTGQCFHW-----------KAVDEPVGSSAWG-------------------------THNATQWIGTVRIPDTSDYLVLLLRETIDTTLYKVLFAPPDYDIVKTDDV----------LYQYFQLDQSLSVLYDQWSHECSRLKRIAACIPGVRVICQDPWECLVSFLCSSNNNIPRIFGMLAKIRRTYGRPLLTLRTSDGNEETFYSFPSFEQLVAKASEDELRNVCGMGYRAKYLLGTMEKIKAASGEPYLNSLRGVKSPLDVQEALIQFPGVGRKVADCIALFSLRQTEAIPVDVHVWDMARRDYAFNTSNVKSLTPTVYRAVGDLFRERFSTHSGWAHSLLFVAELPSFRPVLPSDIREEMESFSKKRNAEK 416          
BLAST of NO11G00200 vs. NCBI_GenBank
Match: ETK86866.1 (hypothetical protein L915_08576 [Phytophthora parasitica])

HSP 1 Score: 255.4 bits (651), Expect = 4.900e-64
Identity = 132/249 (53.01%), Postives = 164/249 (65.86%), Query Frame = 0
Query:  281 LRDYFQVGTPLAPLYATWAHGDPRMRSVADSLPGVRVVRQDPVECLFSFICSSNNNIARIGLMLTRLRQTYGE---PLGDGH------YTFPSVSSLAAASEE-ELRGLGLGYRARFIKKTAAKLIDLGGEEWLLSLRG------KGREEA-----QEALCAFPGVGRKVADCVALFSLDQHGAIPVDVHVWRIACRDYDLSLKDSKSLTPSIYESVGDIFRNKFGPHAGWAHSLLFAAELPMYRARLP 509
            L  YF++ TP  PLY  W     RM  +   L G+R+VRQDPVECLFSFICSSNNNI RI  M+ +L+ TYG+    LG+G       Y FPSV +LAA  EE  LR LG GYRA FI KTA +L +LGG  +L ++R        G +E      Q+ L  F GVGRKVADCVALFSL++  AIPVD HVW+IACR+ D +L D KS+TPS+Y  VGD+FR +F P AGWAHS+LFA +L  ++  +P
Sbjct:  126 LSHYFRLDTPADPLYERWTKPTDRMTEIISRLRGLRIVRQDPVECLFSFICSSNNNITRIQGMVDKLKATYGDLLYKLGEGEEQQQPFYAFPSVDTLAAKCEEATLRALGFGYRAAFIVKTAKQLQELGGASYLNNIRDTKNVRQSGEKEVSYHAYQDELMVFSGVGRKVADCVALFSLEKLEAIPVDTHVWQIACRELDSTLSDRKSITPSVYRMVGDLFRTRFAPQAGWAHSVLFAGDLSAFKPTIP 374          
BLAST of NO11G00200 vs. NCBI_GenBank
Match: XP_008905592.1 (hypothetical protein PPTG_11092 [Phytophthora parasitica INRA-310] >ETI46944.1 hypothetical protein F443_08748 [Phytophthora parasitica P1569] >ETN09031.1 hypothetical protein PPTG_11092 [Phytophthora parasitica INRA-310] >KUF88136.1 valine--tRNA ligase [Phytophthora nicotianae] >KUG01534.1 Endonuclease III [Phytophthora nicotianae])

HSP 1 Score: 255.0 bits (650), Expect = 6.400e-64
Identity = 132/249 (53.01%), Postives = 164/249 (65.86%), Query Frame = 0
Query:  281 LRDYFQVGTPLAPLYATWAHGDPRMRSVADSLPGVRVVRQDPVECLFSFICSSNNNIARIGLMLTRLRQTYGE---PLGDGH------YTFPSVSSLAAASEE-ELRGLGLGYRARFIKKTAAKLIDLGGEEWL------LSLRGKGREEA-----QEALCAFPGVGRKVADCVALFSLDQHGAIPVDVHVWRIACRDYDLSLKDSKSLTPSIYESVGDIFRNKFGPHAGWAHSLLFAAELPMYRARLP 509
            L  YF++ TP  PLY  W     RM  +   L G+R+VRQDPVECLFSFICSSNNNI RI  M+ +L+ TYG+    LG+G       Y FPSV +LAA  EE  LR LG GYRA FI KTA +L +LGG  +L       ++R  G +E      Q+ L  F GVGRKVADCVALFSL++  AIPVD HVW+IACR+ D +L D KS+TPS+Y  VGD+FR +F P AGWAHS+LFA +L  ++  +P
Sbjct:  126 LSHYFRLDTPADPLYERWTKPTDRMTEIISRLRGLRIVRQDPVECLFSFICSSNNNITRIQGMVDKLKATYGDLLYKLGEGEEQQQPFYAFPSVDTLAAKCEEATLRALGFGYRAAFIVKTAKQLQELGGASYLDNIRDTKNVRQSGEKEVSYHAYQDELMVFSGVGRKVADCVALFSLEKLEAIPVDTHVWQIACRELDSTLSDRKSITPSVYRMVGDLFRTRFAPQAGWAHSVLFAGDLSAFKPTIP 374          
BLAST of NO11G00200 vs. NCBI_GenBank
Match: ETL40279.1 (hypothetical protein L916_08506 [Phytophthora parasitica])

HSP 1 Score: 255.0 bits (650), Expect = 6.400e-64
Identity = 132/249 (53.01%), Postives = 164/249 (65.86%), Query Frame = 0
Query:  281 LRDYFQVGTPLAPLYATWAHGDPRMRSVADSLPGVRVVRQDPVECLFSFICSSNNNIARIGLMLTRLRQTYGE---PLGDGH------YTFPSVSSLAAASEE-ELRGLGLGYRARFIKKTAAKLIDLGGEEWL------LSLRGKGREEA-----QEALCAFPGVGRKVADCVALFSLDQHGAIPVDVHVWRIACRDYDLSLKDSKSLTPSIYESVGDIFRNKFGPHAGWAHSLLFAAELPMYRARLP 509
            L  YF++ TP  PLY  W     RM  +   L G+R+VRQDPVECLFSFICSSNNNI RI  M+ +L+ TYG+    LG+G       Y FPSV +LAA  EE  LR LG GYRA FI KTA +L +LGG  +L       ++R  G +E      Q+ L  F GVGRKVADCVALFSL++  AIPVD HVW+IACR+ D +L D KS+TPS+Y  VGD+FR +F P AGWAHS+LFA +L  ++  +P
Sbjct:  126 LSHYFRLDTPADPLYERWTKPTDRMTEIISRLRGLRIVRQDPVECLFSFICSSNNNITRIQGMVDKLKATYGDLLYKLGEGEEQQQPFYAFPSVDTLAAKCEEATLRALGFGYRAAFIVKTAKQLQELGGASYLDNIRDTKNVRQSGEKEVSYHAYQDELMVFSGVGRKVADCVALFSLEKLEAIPVDTHVWQIACRELDSTLSDRKSITPSVYRMVGDLFRTRFAPQAGWAHSVLFAGDLSAFKPTIP 374          
BLAST of NO11G00200 vs. NCBI_GenBank
Match: ETL93427.1 (hypothetical protein L917_08405 [Phytophthora parasitica])

HSP 1 Score: 255.0 bits (650), Expect = 6.400e-64
Identity = 132/249 (53.01%), Postives = 164/249 (65.86%), Query Frame = 0
Query:  281 LRDYFQVGTPLAPLYATWAHGDPRMRSVADSLPGVRVVRQDPVECLFSFICSSNNNIARIGLMLTRLRQTYGE---PLGDGH------YTFPSVSSLAAASEE-ELRGLGLGYRARFIKKTAAKLIDLGGEEWL------LSLRGKGREEA-----QEALCAFPGVGRKVADCVALFSLDQHGAIPVDVHVWRIACRDYDLSLKDSKSLTPSIYESVGDIFRNKFGPHAGWAHSLLFAAELPMYRARLP 509
            L  YF++ TP  PLY  W     RM  +   L G+R+VRQDPVECLFSFICSSNNNI RI  M+ +L+ TYG+    LG+G       Y FPSV +LAA  EE  LR LG GYRA FI KTA +L +LGG  +L       ++R  G +E      Q+ L  F GVGRKVADCVALFSL++  AIPVD HVW+IACR+ D +L D KS+TPS+Y  VGD+FR +F P AGWAHS+LFA +L  ++  +P
Sbjct:  126 LSHYFRLDTPADPLYERWTKPTDRMTEIISRLRGLRIVRQDPVECLFSFICSSNNNITRIQGMVDKLKATYGDLLYKLGEGEEQQQPFYAFPSVDTLAAKCEEATLRALGFGYRAAFIVKTAKQLQELGGASYLDNIRDTKNVRQSGEKEVSYHAYQDELMVFSGVGRKVADCVALFSLEKLEAIPVDTHVWQIACRELDSTLSDRKSITPSVYRMVGDLFRTRFAPQAGWAHSVLFAGDLSAFKPTIP 374          
BLAST of NO11G00200 vs. NCBI_GenBank
Match: ETM46685.1 (hypothetical protein L914_08463 [Phytophthora parasitica])

HSP 1 Score: 255.0 bits (650), Expect = 6.400e-64
Identity = 132/249 (53.01%), Postives = 164/249 (65.86%), Query Frame = 0
Query:  281 LRDYFQVGTPLAPLYATWAHGDPRMRSVADSLPGVRVVRQDPVECLFSFICSSNNNIARIGLMLTRLRQTYGE---PLGDGH------YTFPSVSSLAAASEE-ELRGLGLGYRARFIKKTAAKLIDLGGEEWL------LSLRGKGREEA-----QEALCAFPGVGRKVADCVALFSLDQHGAIPVDVHVWRIACRDYDLSLKDSKSLTPSIYESVGDIFRNKFGPHAGWAHSLLFAAELPMYRARLP 509
            L  YF++ TP  PLY  W     RM  +   L G+R+VRQDPVECLFSFICSSNNNI RI  M+ +L+ TYG+    LG+G       Y FPSV +LAA  EE  LR LG GYRA FI KTA +L +LGG  +L       ++R  G +E      Q+ L  F GVGRKVADCVALFSL++  AIPVD HVW+IACR+ D +L D KS+TPS+Y  VGD+FR +F P AGWAHS+LFA +L  ++  +P
Sbjct:  126 LSHYFRLDTPADPLYERWTKPTDRMTEIISRLRGLRIVRQDPVECLFSFICSSNNNITRIQGMVDKLKATYGDLLYKLGEGEEQQQPFYAFPSVDTLAAKCEEATLRALGFGYRAAFIVKTAEQLQELGGASYLDNIRDTKNVRQSGEKEVSYHAYQDELMVFSGVGRKVADCVALFSLEKLEAIPVDTHVWQIACRELDSTLSDRKSITPSVYRMVGDLFRTRFAPQAGWAHSVLFAGDLSAFKPTIP 374          
BLAST of NO11G00200 vs. NCBI_GenBank
Match: ETO75675.1 (hypothetical protein F444_08802 [Phytophthora parasitica P1976])

HSP 1 Score: 255.0 bits (650), Expect = 6.400e-64
Identity = 132/249 (53.01%), Postives = 164/249 (65.86%), Query Frame = 0
Query:  281 LRDYFQVGTPLAPLYATWAHGDPRMRSVADSLPGVRVVRQDPVECLFSFICSSNNNIARIGLMLTRLRQTYGE---PLGDGH------YTFPSVSSLAAASEE-ELRGLGLGYRARFIKKTAAKLIDLGGEEWL------LSLRGKGREEA-----QEALCAFPGVGRKVADCVALFSLDQHGAIPVDVHVWRIACRDYDLSLKDSKSLTPSIYESVGDIFRNKFGPHAGWAHSLLFAAELPMYRARLP 509
            L  YF++ TP  PLY  W     RM  +   L G+R+VRQDPVECLFSFICSSNNNI RI  M+ +L+ TYG+    LG+G       Y FPSV +LAA  EE  LR LG GYRA FI KTA +L +LGG  +L       ++R  G +E      Q+ L  F GVGRKVADCVALFSL++  AIPVD HVW+IACR+ D +L D KS+TPS+Y  VGD+FR +F P AGWAHS+LFA +L  ++  +P
Sbjct:  126 LSHYFRLDTPADPLYERWTKPTDRMTEIISRLRGLRIVRQDPVECLFSFICSSNNNITRIQGMVDKLKATYGDLLYKLGEGEEQQQPFYAFPSVDTLAAKCEEATLRALGFGYRAAFIVKTAKQLQELGGASYLDNIRDTKNVRQSGEKEVSYHAYQDELMVFSGVGRKVADCVALFSLEKLEAIPVDTHVWQIACRELDSTLSDRKSITPSVYRMVGDLFRTRFAPQAGWAHSVLFAGDLSAFKPTIP 374          
The following BLAST results are available for this feature:
BLAST of NO11G00200 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM25209.12.200e-9683.33n-glycosylase dna lyase [Nannochloropsis gaditana][more]
CEL93771.13.500e-7840.65unnamed protein product [Vitrella brassicaformis C... [more]
CBJ27158.11.300e-7743.19endonuclease III/similar to 8-oxoguanine DNA glyco... [more]
GAX21501.11.100e-6842.05N-glycosylase/DNA lyase [Fistulifera solaris][more]
ETK86866.14.900e-6453.01hypothetical protein L915_08576 [Phytophthora para... [more]
XP_008905592.16.400e-6453.01hypothetical protein PPTG_11092 [Phytophthora para... [more]
ETL40279.16.400e-6453.01hypothetical protein L916_08506 [Phytophthora para... [more]
ETL93427.16.400e-6453.01hypothetical protein L917_08405 [Phytophthora para... [more]
ETM46685.16.400e-6453.01hypothetical protein L914_08463 [Phytophthora para... [more]
ETO75675.16.400e-6453.01hypothetical protein F444_08802 [Phytophthora para... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL110nonsL110Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR081ncniR081Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR018ngnoR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO11G00200.1NO11G00200.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|611657gene_10701Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100311g1gene5296Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO11G00200.1NO11G00200.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO11G00200 ID=NO11G00200|Name=NO11G00200|organism=Nannochloropsis oceanica|type=gene|length=3630bp
ATGGCCTTCCCCGCTTCCACTCACAAGgtaggtgaatttcttcaaatatt
gttttgtaagagtttgagggggacaagttgcagttagcacctacttgaac
aacaattttcaaacccacatttatctagttacctcagtctattttgcggc
gttcggaacacaaacagtactctagcacgcaagcgagcaaatggagggtt
ggggaaatgagacgcagaaagggcattagcaagatggaaacagaggaaat
ttgaaagtagtaggttcacaagagattctggagaaatgacagcatttttg
agtttgtagcgaaagaaaataatgcggaaagtcctgagaaaagggttggg
aggtaccacgtaccccctctcttctctccctgcccagctccccttccctc
cacctttccccagcacttatccgtccttataaggtccgcacacaaacacc
tacagcatcgacagactgtaagtgtacatgagaagaaaagcaatcacagg
gtgactcggttgtcctgcagtgaatgctccccagGCAGCGAAGGGGAAAG
ACGACACCAGTAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTCGTGTTTTT
CTTTCTCCTATCCCTCTCCGTCCTGAGAAGAGGCACCACGCGTGCCGCAG
TTGCCGCGGCGTCCTCCTCGTCCCCCCCCCCGCTATCTCGTTTTTCGGTC
GCTACTGGAGCGGCGGCGGTGGCAGGGCACGACAACGCCGTGAAAACATA
AGACCCCTGCTCCTCCTATATTCTACTACCCCTTCGTGCAACTCCCCTCA
ATCACGCACCTCGATAATGGCAGCCAAGCGCAAAGCCACGACATTGAAAG
CGGAAACAACAACACCTGGGGCAGGAGCAGCAGGAGCAGCAGCAGCAGCA
GCAGCAGCAGGAGCAGCAGCGACAGCAATGAAAGGGGGAGGGCGCGAGGG
GGTTCGGGGAAATTGGATGGATTTAGGAGTGCCTGCGTATGAGCTTCGAC
CAGAGTTTTCCCTAATGATGGGACAGTGCTTCAACTGGCGCCGCAAGATT
GATCAGGGTATAAAGAAGGGAAAGGAGGTGGAGGAGGAGAAGGGAGGGAA
GGAGGAGGGAAAGGTGATCGAAGCACCTGCATCAGCAGCAGTCAAAGTAA
GAAAAGGAGGAGAAGGGGAGGAGGAGGGGGAGGAGGAGGAGGAGGACAAG
GTGTGGGTAGGGGTCCTGGATCGGTATATTCTGGAAGTGCAACAAACACG
TACTTCTACATTGGTGCGACGCGTGGTGGTGGCCAGCGGCGGGGGGGTAG
GGATAAAGAAGGGGGAGGAAGAGGAGGAAGAGGTGCTGTTGGCGCGCTTG
CGGGATTACTTTCAAGTGGGGgtgagtgttgactgttgcgaggaagaggt
ttcgtgagggagggggatacagtggggagggccctgtttctcctctcaca
ccaacgataaagggcatttactgacactacacgacccaccttcacccact
gccctctctacacgtctgtgcacagACGCCTCTGGCCCCTCTTTATGCAA
CGTGGGCTCACGGGGATCCTCGTATGAGGTCTGTCGCTGACTCTCTGCCA
GGCGTGCGGGTTGTACGgtacgtggccgcccttccctccctccgtccctt
cctccacccccttcctgatccatcctggtgcgccccacccccatttccat
tcattcatattttgtttattcattccttcaccgcccctcccccccaaggc
caaatatatgctcactcgcatacgcatttatgaccttccccctccccctc
cccctccctttcgcccggcagCCAGGACCCGGTGGAGTGTCTCTTCTCCT
TCATCTGCTCTTCCAACAACAACATAGCCCGCATCGGCCTCATGCTCACC
CGTCTCCGACAGACATATGGCGAACCCCTGgtacctccctccctccctcc
ctccctccctcgattcctccctccttcactacacgtgtgatttgaatcct
ctctcatttattccccgtccctccctccctccctccctccctccctcttt
cccttccctcttcttaatcccagGGCGACGGGCACTACACCTTCCCCTCC
GTTTCCTCTCTTGCTGCAGCGTCCGAAGAAGAGCTTCGCGGTCTAGGACT
GGGTTACCGAGCGCGGTTCATCAAGgttatcaatcattcaagccctccct
ccctccctccctccctctctttcctttctcttaagatttcgtgtcccacc
ctccgtctcaccctccgtccctccctccctcccttcctccctccctcctc
ctgctcagAAAACTGCGGCCAAGCTAATAGACCTGGGAGGGGAGGAATGG
CTTTTGTCATTACGTGGAAAAGGGCGCGAAGAAGCGCAGgtaggcttcta
gaagcgcgtgtttccattcgtctcgccctcccttcctcccttcattccct
cccctcgtccctgactccttccttttcaaccttcccctccctaccccctc
cctccctccccccccccctccagGAGGCCCTCTGTGCCTTCCCCGGTGTA
GGGCGGAAGGTGGCTGATTGTGTAGCGCTATTTTCGCTCGATCAGCACGG
AGCCATCCCGGTGGATGTGCATgtaaggagggagggagggagggagggag
ggagggagggagggagggagggagggagggtaggcaggcgggtgctgctg
ggtagtaaaaggagaggaagagaaagagggagggaaggagggagggaggg
agggagggagggagggagggagggagggagggagggagggagggaggagt
atcgtgaatttacacgagtcttattctcactctacggtccttttctctgt
ccctccctccctccctccctccctccctccttcccttcctccctccctag
GTCTGGCGTATCGCCTGTCGAGACTACGACCTGTCCCTCAAGGACAGCAA
GAGCCTCACCCCCTCCATATATGAGTCTGTGGGTGACATCTTCAGGAACA
AATTTGGGCCGCACGCTGGCTGgtaactagacatatcgctttctacatcc
ctctttttctttttgatactggataattaccttccctccctccctccctc
cctccctccctagGGCCCACTCCCTACTGTTTGCCGCAGAGCTGCCCATG
TACCGCGCCCGTTTACCGCTCGCCCTTCAAAATGAAATGCTAGCGTTCAA
GAAAGAAGAAAGCGAGGGAAAATTTCTGAAGAGGGAGAAAAAGAAGCAGG
AGAAGAAGAACGCGATGGAGAAGGAAGAGGAACAGGAGGAGGAGGGTAAG
GGAGGGAGGGTGATGAAGAATCAAAAGGGGCGGGGACGGAAGGAGAAGCC
GGTTGGAACGGCGGCTCCAGGCTCTAGGAAGAGGGCCAAGAAGGAGAAGA
AGGATGAAGTGGGAGGGAAAGAAGAAGAAAGAGAAAAGGCGATCGTAAGA
GGGAATGGACAGGCACTAGATACACCGGTGGCGGTGCTGGAGGGGATGGT
GAAGAAGGAGGTGAAGGAGAGGAAGATCATAGTCATGAAAAAGGAAGTGC
TGGAGGCGACAACAACGGCCCTGACAGAACCAAGTAGAACGGCAGCGGTG
ACGAGGAGCAGAGGAAAGGAATGGGAATGA
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protein sequence of NO11G00200.1

>NO11G00200.1-protein ID=NO11G00200.1-protein|Name=NO11G00200.1|organism=Nannochloropsis oceanica|type=polypeptide|length=662bp
MAFPASTHKAAKGKDDTSSSSSSSSSSSRVFLSPIPLRPEKRHHACRSCR
GVLLVPPPAISFFGRYWSGGGGRARQRRENIRPLLLLYSTTPSCNSPQSR
TSIMAAKRKATTLKAETTTPGAGAAGAAAAAAAAGAAATAMKGGGREGVR
GNWMDLGVPAYELRPEFSLMMGQCFNWRRKIDQGIKKGKEVEEEKGGKEE
GKVIEAPASAAVKVRKGGEGEEEGEEEEEDKVWVGVLDRYILEVQQTRTS
TLVRRVVVASGGGVGIKKGEEEEEEVLLARLRDYFQVGTPLAPLYATWAH
GDPRMRSVADSLPGVRVVRQDPVECLFSFICSSNNNIARIGLMLTRLRQT
YGEPLGDGHYTFPSVSSLAAASEEELRGLGLGYRARFIKKTAAKLIDLGG
EEWLLSLRGKGREEAQEALCAFPGVGRKVADCVALFSLDQHGAIPVDVHV
WRIACRDYDLSLKDSKSLTPSIYESVGDIFRNKFGPHAGWAHSLLFAAEL
PMYRARLPLALQNEMLAFKKEESEGKFLKREKKKQEKKNAMEKEEEQEEE
GKGGRVMKNQKGRGRKEKPVGTAAPGSRKRAKKEKKDEVGGKEEEREKAI
VRGNGQALDTPVAVLEGMVKKEVKERKIIVMKKEVLEATTTALTEPSRTA
AVTRSRGKEWE*
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Synonyms
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