NO11G00110, NO11G00110 (gene) Nannochloropsis oceanica

Overview
NameNO11G00110
Unique NameNO11G00110
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4087
Alignment locationchr11:39684..43770 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr11genomechr11:39684..43770 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO11G00110 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR081ncniR081Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR018ngnoR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO11G00110.1NO11G00110.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO11G00110.2NO11G00110.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|355162gene_10712Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO11G00110.1NO11G00110.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO11G00110.2NO11G00110.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO11G00110 ID=NO11G00110|Name=NO11G00110|organism=Nannochloropsis oceanica|type=gene|length=4087bp
GAACCAATAGTGTCTGAACACGACATCTCAAGGGGCAAAGAGGCCAACGG
AGCACTAGGGGAGGGGGAGGATGTACGGGTCCGCCTCTCTTTACCACCGA
GCAGGGGGGCCGTGTCAAGTGGGGATCAGTGCCAGGAGCACTAATGAGGT
CAGCAGCAGGAGCAAAAGCAGTGAAGCCTGGGAAGATGAGCGCAAAGGCA
AGACAGGCGGAGGGGGTGCAGGCAAGGGGCTTTCCACCCTTCTATCCATG
GGCGAGGGATATGGCGTGCACGTTCAGCAGCAAGAGCCGCAGAAGCAGTC
CTCTTTGACCGCCTTCCAGCCGCAGTTCTATGTGCAGCAGCGCTCCCAAG
GCCACGGGCAGGTAGGCCAGGCCCTTTCCAATCTCTCCCTCTACCCACCG
CCGGTGCAGCACTACAGCATCAGCAGCAGCCAGCAGCACCTGCATCCACC
CCACGCCCTCCAGTTGGCCTCCAACTCCTCCTGCTTCATTCGTCCTCCTG
TTCGGACCACCACTACCACGACCCGCACTTTTCTCCCTCTTTCTTCCATT
GTGAGCCACCCTTCCTCGTCTTCTTCTTCCTCCTCTTCCTCCTCCCCCAC
CGTCCCTGCCTTGCCGGCGGCCTCCGCGTCGGGGAAACGGTCGAGAGAAA
ATGACGGAGGAGAACGAGGAGGAGGAGGAGGAGGAGGAGGAGGTGGGAAG
GGGGCTCCAAATCAGGGAGTGTGGTCGGCAGCCTTGCGGACTGAGTACCG
AGGATGGCTGCAGCTAAACAGGGGTATAAGTAAAGAGgtgaggagtgagg
aggggaaggaggaggcggcatgcatatacctatcaagccaagcccgccga
catcgaatcgaaatcacactgacttgacctaacctcctccctccctcctt
cctccctagACTTCCATCACCTACTCCCATGCCGTCCATGGTGTCTTGAA
GGAGCTCGTCGTCAAGCGGGTCCGCGAGGGCCGTGTCGGACAGgtgggta
gggagggagggaggagaaaggaggaagggagggagcgatatgatggaaat
cgtctgccccgtctgaccgtctgtctgctcgaagcgccctttgacctccc
ctcgcaccctccctccctccctgcgtagCCGACTCACGGGATGGACGTGG
CCCAGCTCCAGGCTCTGATTGAAGAGCAAGCGCATGAGGCGGAGCGCATC
ATCAAGAGGGACAAGCGCTCTTCCTACTTCCGGTACCTTAAGGAGTTCAT
GGGCATGCAGgtagggagggagggaggaagaaagggggagggtagttgct
ttctatcgatggctctcgccgcgggatgtactttcatgaagtgcctcttg
tcacgtggctgtcctccttttctcgcttcctcgaaacagGAGGACGATCT
GAACGCATTCAATGTGGCGGCCCTTCCCTCCTCCTCCTTCCAGCCCTTCT
CCTACGCCTCCTCCAATACCTCCACCAGCTCCTCCGCCTCCCTCCCTCCC
ACCCACACAGACGAACACCACAACGCCTCCTGCTCCTCCTTCTCCTCTTC
GCCCTCCCTCCCTCCCTCCTCCTCACCCCCTACCTCCATCCCGTCCTCCG
TGTCTTCGTTCCTGCTGCAGCAACAGGCAGGGGACGAAACGGCGAGAGCA
Ggtgagcaagcgaaggcatatatccctccctccctctccctccctccctc
tttccctcccccctctctcggttttatccttatctatccttttctctggt
catccactgacctccctccctccttccctctctcctcccttccctctctc
cctccctctttccctccctccttccccccctccctctctctcccagGCAC
TGACACGCCTCTATGGTCGCCGGCCCTCCAACAGGAATATCACAGATGGC
TGGAGGGTAGGAGGGAGGAAGGGGGGTGGGGGCTGGGGGAGGCGCCGTGG
GAGGACGTTTTGACGCACGTGCAGATGGCCCATGTCTTGCTGCGGAAGgt
aaaggaggaagggagggagggagggagggagggatcgagggggtggggaa
atcgcatacaaccatacaaaacggtgggcatgacctctccgtatggtgac
gagcagctgttcacctttcggtctctctccccgccctccctccctccctc
tctccctccctcagGTTTTTGCCGACGAACTGTCACGCGATCCCAAGGCC
GCCCGGGCCTACGCGAAGCTCGGCCGAGAGGAACTAGgtaaggggggagg
gagggagggagggggggagggagagagagagggaggggggaggagacaaa
tcttaccacaggcccatcaccagttgctcagcccgtccgtcgctccctcc
ctccctccctccctccctccctccacagGCACTACGCTCAAAGCCCTCAT
TGTCCGCAAGCCGGGCCTCCTCGCACGTGTTATCAAAGGTCCCCGAAACC
GGCGTTTCTTCCAGgtacgcctctccctccctccctttctccctccctcc
ctccctccctcctttcctccctccctccttataagttctcacatcggcca
atctaccttctctaccatcttcctccctccctccctccctccctccctct
ttcctccttcccatagCCGGTGACCACCTTTTTCGGCCTCTCCCCCCACC
CCTCCTCCCTCTCCCCGCCCCTCGTCGCTCCCACCCTCCAACCTTCTCAC
TCCTCGTCCTCCATCACCTCCTCCTCTCCCTCCTCCTCCTCCTCCTCCTC
CTCCTCCTCCGTCCCTGTCTGGAGCGACGAGCTGCGGTGCGCCTACAAGC
GGCGACTGGTCATGGACCTGGGCTGTGGCGAAAGTGAAGTCTCCTCTAAC
ATGCAGgtaaggaaagagggagagaaggagggctcaggggaggaagggaa
gaaaggagggggatggctgtatgctaatttaccttctgttcggcctcatc
ctccctacctttttccctccctccctcgtccagTCTGCCGTGGCGCTCCT
TCGATCCCTGCTTGAGCGTCGGGCCGCGCGTCGAGAAGGAGGCCGTTTTT
CGTCCCTCACTCGAACGGAGGCTGCGGCCTTGCTGCGGGAGGAAGGGGGA
GGAGGGGAGGGATGGTCACCGTCGTCGTTTCAGATGTTCCTGCAGAGTGG
AATGATGAATGAGGATGAGCAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG
GAGAAGAAGAGGTGGGGGAAACGGAGAAAGAAGAGGAAGAGGAAGAGGAA
ATGCAGGCAGAGAGGGAAGGACCCCTTCACCCGCACCCCTCGTCCTCCTT
CGTCTCCGCCTCCGCCTCCTCCCCCTCCTCCTTGGGCTGTATAAAGTGCA
GTGAGCTTCAGCAGGAGCGAGATATGTGGGCACAGCGAGCCTCTGCCTTG
CAATGCCGGGTCCTCGAGCTCGAACGTACTCTCCGTGCCTCCTGCCCTCC
CGTCTCCCCTCCCCCCTCTCCCGCCAGCAGAAATTGCAGCGGCGTCGACA
GCGTCAGCAGCAGCAACAGCAGCAATAGGAAGAAGAAGAAGCGGCATTTT
GTGTCTACTCTGCCGCCGCTTGGAGGAGAAGGAAGAGGAAGAGGAGGAGG
AGGAGGAGGAGGAGGAGGAAGAAGAGGAAGAGGAAGAGGAGGAAGAGGAG
AAGAAGGAGGAGAAAGAGGGGGAGAAGGAGGAGGAGGTAGAGGAGGAGTG
ACGGCTGACGGTTCCGGTTGTGCGATGCATTCAGATGCAGAGGCGGACAA
GGAAGGAGGAGAGGAAGGCAGGCTGTATTCATCCTCCCCCCCTCCTCCCT
CCACCACCTCCTCCCATCGTTGGCATCCCAAAAAGATGCGACTTGCTCCT
TCCGCCATTTATCCTTCTACGGCATCCGCACCAGGCCCAGCACCTGTGGT
ACCTGAGGCAGCACCATCGCCCACCCTCCTTCCCTCCCTCATCGCCCCCC
CAATCACCACCGTCGCTCTGCACAAATCCTCCCCCCTTCCTCCTTCCCTC
CCTCCCGCCCTCCCTCGTCCTGCCTCCTCATTCCTCCGACAGCGAGCAAC
AAGATGGCCTCTCTGCTTTCGGCTTGTCAGGCGGTAG
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protein sequence of NO11G00110.1

>NO11G00110.1-protein ID=NO11G00110.1-protein|Name=NO11G00110.1|organism=Nannochloropsis oceanica|type=polypeptide|length=950bp
MYGSASLYHRAGGPCQVGISARSTNEVSSRSKSSEAWEDERKGKTGGGGA
GKGLSTLLSMGEGYGVHVQQQEPQKQSSLTAFQPQFYVQQRSQGHGQVGQ
ALSNLSLYPPPVQHYSISSSQQHLHPPHALQLASNSSCFIRPPVRTTTTT
TRTFLPLSSIVSHPSSSSSSSSSSSPTVPALPAASASGKRSRENDGGERG
GGGGGGGGGKGAPNQGVWSAALRTEYRGWLQLNRGISKETSITYSHAVHG
VLKELVVKRVREGRVGQPTHGMDVAQLQALIEEQAHEAERIIKRDKRSSY
FRYLKEFMGMQEDDLNAFNVAALPSSSFQPFSYASSNTSTSSSASLPPTH
TDEHHNASCSSFSSSPSLPPSSSPPTSIPSSVSSFLLQQQAGDETARAGT
DTPLWSPALQQEYHRWLEGRREEGGWGLGEAPWEDVLTHVQMAHVLLRKV
FADELSRDPKAARAYAKLGREELGTTLKALIVRKPGLLARVIKGPRNRRF
FQPVTTFFGLSPHPSSLSPPLVAPTLQPSHSSSSITSSSPSSSSSSSSSS
VPVWSDELRCAYKRRLVMDLGCGESEVSSNMQSAVALLRSLLERRAARRE
GGRFSSLTRTEAAALLREEGGGGEGWSPSSFQMFLQSGMMNEDEQEEEEE
EEEEGEEEVGETEKEEEEEEEMQAEREGPLHPHPSSSFVSASASSPSSLG
CIKCSELQQERDMWAQRASALQCRVLELERTLRASCPPVSPPPSPASRNC
SGVDSVSSSNSSNRKKKKRHFVSTLPPLGGEGRGRGGGGGGGGGRRGRGR
GGRGEEGGERGGEGGGGRGGVTADGSGCAMHSDAEADKEGGEEGRLYSSS
PPPPSTTSSHRWHPKKMRLAPSAIYPSTASAPGPAPVVPEAAPSPTLLPS
LIAPPITTVALHKSSPLPPSLPPALPRPASSFLRQRATRWPLCFRLVRR*
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protein sequence of NO11G00110.2

>NO11G00110.2-protein ID=NO11G00110.2-protein|Name=NO11G00110.2|organism=Nannochloropsis oceanica|type=polypeptide|length=679bp
MDVAQLQALIEEQAHEAERIIKRDKRSSYFRYLKEFMGMQEDDLNAFNVA
ALPSSSFQPFSYASSNTSTSSSASLPPTHTDEHHNASCSSFSSSPSLPPS
SSPPTSIPSSVSSFLLQQQAGDETARAGTDTPLWSPALQQEYHRWLEGRR
EEGGWGLGEAPWEDVLTHVQMAHVLLRKVFADELSRDPKAARAYAKLGRE
ELGTTLKALIVRKPGLLARVIKGPRNRRFFQPVTTFFGLSPHPSSLSPPL
VAPTLQPSHSSSSITSSSPSSSSSSSSSSVPVWSDELRCAYKRRLVMDLG
CGESEVSSNMQSAVALLRSLLERRAARREGGRFSSLTRTEAAALLREEGG
GGEGWSPSSFQMFLQSGMMNEDEQEEEEEEEEEGEEEVGETEKEEEEEEE
MQAEREGPLHPHPSSSFVSASASSPSSLGCIKCSELQQERDMWAQRASAL
QCRVLELERTLRASCPPVSPPPSPASRNCSGVDSVSSSNSSNRKKKKRHF
VSTLPPLGGEGRGRGGGGGGGGGRRGRGRGGRGEEGGERGGEGGGGRGGV
TADGSGCAMHSDAEADKEGGEEGRLYSSSPPPPSTTSSHRWHPKKMRLAP
SAIYPSTASAPGPAPVVPEAAPSPTLLPSLIAPPITTVALHKSSPLPPSL
PPALPRPASSFLRQRATRWPLCFRLVRR*
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Synonyms
Publications