NO11G00100, NO11G00100 (gene) Nannochloropsis oceanica

Overview
NameNO11G00100
Unique NameNO11G00100
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3565
Alignment locationchr11:33903..37467 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr11genomechr11:33903..37467 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO11G00100 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR081ncniR081Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR018ngnoR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO11G00100.1NO11G00100.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO11G00100.1NO11G00100.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO11G00100 ID=NO11G00100|Name=NO11G00100|organism=Nannochloropsis oceanica|type=gene|length=3565bp
AAGTAATACTACAGAAACAGAATGAATGGGTGTTAGAACTGGGAGTCGTA
AGTTTCTTTAGTGAAAAAGGAGGTACATAAATGGAACAAGAAGCAGATGC
ACTGCACAGCGGTGCAACGCGTCAGTCTATCCGGTGACGACACCCTGCCC
CACCGACGAGACGAGCCTACTGCGGGGACGGGGGACACGACGCCCGAGTG
GTATGCGATAGATGCCCTGCGTGCCAATGTCTTTGGGGAGGCTCTTTTCA
AGATTACAGGCGAAGATCAAGGGGAGAGGCCTGTGCTAGCACATGTTTGC
GGGTCGCGGCGGGGCTTCAGGGCATGTCTTACATTTTTTTTGTCTTTCGG
AAAAAGGCGATATAGGAGGACAAGGAGGTTTTCATTTTCCGTCTGCCCCC
CGCCAAATGCCTCTCTACAATGCCACGGCCCTCTTTTCATTCCTATTTAC
CAAAGCTAACAGCCACTCACAAATCCTAGCCATCAATGCTCGAGGTGGAG
TGACATGGATACCTCCATCCACCCTCAATTATTCCCAACATTCTGCTCCT
ACACACCCAAAATAAACACACCCACAGCAGCACACGGCTCCCGGAAAAAC
GTGCGCCCCCAAAATGGCAAAGGCTCCATCATCTTCGTCACCATCACCGC
CGTCCGCATGGTCTCCTCTCTTTCTCCGTCTCCACCACCAGGGTGTGGTG
CATGCTGTGCTTCTCTACGAGgtacgcaaggctaaggggagagtgaaggg
ggaaaacgacgcgacaaaaaaaagggtgttaaccctacatctcacacgcc
ctcaatcggcaacattatgacgattattaaagaagccgctgatctttttt
atatgctctttctcttgattctcagtttactgaaatccctctcctttcta
tcctccctctcttcctctttttttccttccttcccttcctccacatctcc
actgtcatttaatctaccagGGCCTTCCCGTGTTGGAGCTGAAAGCCATG
GTGACGAGTCTGTTCTTGTTGTCACCTTCCGCAGGTTGCTTGGTGGGAAT
CAAGgtgggtgagggccgggaggagggacagcagggattaaatgaatatg
ggaaagtggtgaaaggcgcgctggatggctgaggtgtacttccctgtgtg
ccgaaagagatggtgaataaaatagatgattaaattgatgtgcttgcact
cttactcgttgtcatccctccatctccagGAAAGGAAGACCAGGGAGAGT
AAACAAGAGGAAGAGGGTGGCAGCGAAAGCATGAGAGGCCGAGACAAAGC
ACAACCCACGGCAGTTTCAGAGCAGCATGTCGTGGTACCTCTGTCGTGTG
TTTGTCGTTACCCTCATCAGCTGCAGCACCGCGAGTACGATCTGATTCTT
CTCCCCTCGACCTGCTCTGCGCCTAACCCCCCCGCCCTCCCCCCCGCCCT
CCCAGCCCGCCTCCCTGTCTCCCCTACCTTCCCATTGGCCCATGCCACTC
CCTTCATGCATCGACGCCCTGCCTCCTCCCCCTCCTTTCTTCCTAATCTC
CTCAATCCTCCATTGAGGTCGCTACCGGCAGGCCCCTCCTCGCCCTCTCC
AACCACCCCTCTATCCTCCTTCTCCCCTCTTATCCCCTCGACATCCTCTC
TTTCCTCCTCCCTCAAGCCCTCTTCTGCTTCCAACCCTACATCTTCCACT
TCACTTTTCCCGAGAGAGATGATCACGGATGGATATAAAAACCACCACGC
CCGAATGATGCAGGGGGGGGGGTTTGGCGAGGAAGACGAGGCAGAGGCAG
AGGAGGAGAGAAAGGAGGAGGACCAGCAGCAGCAGCAGGAGGAGCAGGAG
GATGGTGAGGAGCCGCAGGAGGAGGAGCTGCAGGAGGAGGAGAACGAAAT
GCTCGCCGCGGAGGTAGAAAAGGAAGGAGCAGCGCAGTCTTCAGCCTTGT
CTACGCCTGCACCAATGGCATTGGCAGCAGCAACAGCAGCGGCACTGGAG
CAAGCCGTAGTTGACTTGGTGTCTTCAACACAACAAAAGAAAAAGGCTGA
TGAAAGGGCGCATGCAAACCGCGAGGAAGAGAAGGAGGGACTGCAGGAAG
ACAAAAGCGGCCCCTCTTCCCCTCCCTCCCTCCCTCCCTCACGCTTACAT
CCACATCTGCAGATAAAAGAAAACCAAGAGAATGAGGCGGACCGCGTTTC
ACGCACTCACTCCCCTTCCCTTCGTCCCTCATCCCCCTCACTCCACCACC
TCCTCTTACCTCCCGTACCACCTCCCTATGTCCCGCCTCCCCGCCCTGCC
AGCCCTCCTTCCTTTTCTGCAACTGATACCGAAGAAGGGTTGGACGAACA
GGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCTCCGTGGGAGGCCGTGG
GGGAGTTTCTGGACTTTATGATCAAGGgtaagaagggcgaagggaggagg
gtgggagggaggtttgggaagggaaatcaggagggaacgctgagaggcat
gggtgagaggttgatttgcactaatcctcgcctgccgtcttttctttccc
ccaaacctcttttcggttcatcaatgtgcgaagCCGCCCTCCTCGTTCCC
CCCGATCTCCTCATTCTCCGTGGCTTCCTCTCCTCCTCCACCTCCGCCCG
TCGCTCCCTCTTCTTCTCCTACCGCTCCTTCCTCTCCCGCACCAGCAACC
TCGATGCCCTGGTGCAGGTCATTTGTGATCTTGTCCAGCAGGCACGGCGG
GAGGGAGGGCGGGAGGGAGGGCGGGAGGGAGGGCGAGAGAGAGTGTCGGT
AGCGACGCAGACGGGGTGGGGGAAGGAGAGGGTGGATTGCAGCATTAGCA
TTAGCAGCATTAGCAGTAGCAGCAGCAGCAGCAGCAGGAGGAGATCGAGC
ACCCCATGGCGCGGAAGACCGCCTTTCAACCTCTTTAAATCATCCTATGC
CTCCTCTTCAGCCTCCTCTCACCCATCGCCTCCCACAACCTACAGAGGGG
CCGCTCGAAATCCATCCTTGTCCAAGTCCTCCCTCCCTCCCTCCTCCTCT
TCTTTCCTCTCCCTCCTCTCCTCCCTGCATCTGACCCCCGTGCAGCTCCG
CGCCTTGCGCCGAGCGCTTGTGGAGGAAGACGAAGAGATTATGGTATGCA
TAAAAAGCTACCAAGAAACACATGATAGAGACAAGTTGAAAGCGGACTTG
AGGGCGGCGGTACGGTTGGTGGTGCTGGAAGGGGGGAAAAAGGGAAGACG
GGAGTGAGGAGCGGTGAGGGAAAGGGAGGGACGGAGGGGAGGTCTAATGC
ACCTTCGGGGCTGCTATCAATTCAACAACAATGACAAGAAAATAAAAAAT
AAGGAGAAGAGGGAGGAGGTGGGAAGGGAGGACGGGAAGGAGGGCTCCCT
TGTACGCATAAGAAATGGCAACTATTGAGATGCACGAAATAGTTAGACAC
TTGGAGAAAAGACTGAGCTTTGTGCACTCTCTTTTGGTGCACCCCCTTAT
TTCCGCGTGTACAAAGTGCACAGACCACACATACCAACTATAGTCAACCA
GGAAAATCAATAAAA
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protein sequence of NO11G00100.1

>NO11G00100.1-protein ID=NO11G00100.1-protein|Name=NO11G00100.1|organism=Nannochloropsis oceanica|type=polypeptide|length=688bp
MAKAPSSSSPSPPSAWSPLFLRLHHQGVVHAVLLYEGLPVLELKAMVTSL
FLLSPSAGCLVGIKERKTRESKQEEEGGSESMRGRDKAQPTAVSEQHVVV
PLSCVCRYPHQLQHREYDLILLPSTCSAPNPPALPPALPARLPVSPTFPL
AHATPFMHRRPASSPSFLPNLLNPPLRSLPAGPSSPSPTTPLSSFSPLIP
STSSLSSSLKPSSASNPTSSTSLFPREMITDGYKNHHARMMQGGGFGEED
EAEAEEERKEEDQQQQQEEQEDGEEPQEEELQEEENEMLAAEVEKEGAAQ
SSALSTPAPMALAAATAAALEQAVVDLVSSTQQKKKADERAHANREEEKE
GLQEDKSGPSSPPSLPPSRLHPHLQIKENQENEADRVSRTHSPSLRPSSP
SLHHLLLPPVPPPYVPPPRPASPPSFSATDTEEGLDEQEEEEEEEEEEAP
WEAVGEFLDFMIKAALLVPPDLLILRGFLSSSTSARRSLFFSYRSFLSRT
SNLDALVQVICDLVQQARREGGREGGREGGRERVSVATQTGWGKERVDCS
ISISSISSSSSSSSRRRSSTPWRGRPPFNLFKSSYASSSASSHPSPPTTY
RGAARNPSLSKSSLPPSSSSFLSLLSSLHLTPVQLRALRRALVEEDEEIM
VCIKSYQETHDRDKLKADLRAAVRLVVLEGGKKGRRE*
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Synonyms
Publications