NO10G04080, NO10G04080 (gene) Nannochloropsis oceanica

Overview
NameNO10G04080
Unique NameNO10G04080
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3695
Alignment locationchr10:1228757..1232451 +

Link to JBrowse

Properties
Property NameValue
DescriptionMajor facilitator superfamily mfs 1
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:1228757..1232451 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR036259MFS_trans_sf
IPR020846MFS_dom
IPR011701MFS
Homology
BLAST of NO10G04080 vs. NCBI_GenBank
Match: XP_005854492.1 (major facilitator superfamily mfs 1 [Nannochloropsis gaditana CCMP526] >EKU21864.1 major facilitator superfamily mfs 1 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 572.4 bits (1474), Expect = 1.400e-159
Identity = 323/478 (67.57%), Postives = 373/478 (78.03%), Query Frame = 0
Query:    1 MRAVKTFTVFAGGFLMRPLGSIVLGAVGDKYGTAAALKWSIALMTIPTVVTGCLPTYAKVGIAAPLMLTACRLLQGLSVGGELIGALLHTSDNSPAEHRGFFCGLVAVFGSLGNLLGSLVSVIMRQAMTDEQLMSWGWRIPFLTGSVLGFVGIFLRTQTGALK--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQHPQHTKSFCSIVREAASGDKPRFLRVVCLAALNNALFYFHFVWLGTYLAELAPNPIRAQKAFSVTCVAQAVFIVGNPIWGAVGDSSGGASKRLRWNIAGVALTCFAPTCLLLLVGPGKVELSFLYAVLVGLVMGFGVSGNYYAWVCESLNDSPSRFLTTSVAYNLGAIVGGCTPMLASALAESDMLLAPILPLSALAVGTFVVLGSYEFGWQLSPALEKGQNIRGPEEGGFLSLPIGATAVEGATKKQKNAE 477
            +RA++TFTVFAGGFLMRP+GS+VLGAVGDKYGTAAALKWSI LMT+PT+VTG LPTY+K+G+AAPL+LT CRLLQGLSVGGELIGALLHT+D+SPAEHRGFFCGLVAVFGS+GNL+GSLVSV+MR A++ ++L+SWGWRIPFL GSVLG VGIFLRT+TGALK                                      XXXXXXXXXXXXXXXXXXXXXX    P H +SFC I+REAA+GDKPRF+RVV LAALNN+LFYF+FVWLGTY+AELAPNP+ A +AFSVTCVAQAVFI GNP WGA+GD  GG +KRLRWNI GV L+CF P CL LL+  G+  LSFL+A L GL+MGF VSGNYYAWVCESLN+SPSR LTTSVAYN+GA+VGGCTPMLASAL+ S + LAPILPLSA+A    VVLG YE+G  +    E G+   G EE  FL+L +     EG   K K A+
Sbjct:  151 VRAIQTFTVFAGGFLMRPVGSVVLGAVGDKYGTAAALKWSIGLMTVPTIVTGLLPTYSKIGLAAPLLLTLCRLLQGLSVGGELIGALLHTADHSPAEHRGFFCGLVAVFGSMGNLVGSLVSVLMRHALSKQELLSWGWRIPFLAGSVLGLVGIFLRTKTGALKHGGEAGRRPTREERVLIEMVECPIAVEEETVAAYREAAXXXXXXXXXXXXXXXXXXXXXXVAARPSHPRSFCGIMREAAAGDKPRFIRVVVLAALNNSLFYFNFVWLGTYMAELAPNPLGAAQAFSVTCVAQAVFIFGNPFWGAMGDWGGGLAKRLRWNIVGVVLSCFLPPCLFLLLRSGRASLSFLFAALTGLLMGFTVSGNYYAWVCESLNESPSRVLTTSVAYNVGAVVGGCTPMLASALSASPIFLAPILPLSAVAAAVAVVLGRYEWGEYVKRKTEGGKG--GREE--FLALRV----EEGKEGKGKMAK 620          
BLAST of NO10G04080 vs. NCBI_GenBank
Match: EWM25616.1 (major facilitator superfamily protein [Nannochloropsis gaditana])

HSP 1 Score: 572.0 bits (1473), Expect = 1.800e-159
Identity = 323/479 (67.43%), Postives = 373/479 (77.87%), Query Frame = 0
Query:    1 MRAVKTFTVFAGGFLMRPLGSIVLGAVGDKYGTAAALKWSIALMTIPTVVTGCLPTYAKVGIAAPLMLTACRLLQGLSVGGELIGALLHTSDNSPAEHRGFFCGLVAVFGSLGNLLGSLVSVIMRQAMTDEQLMSWGWRIPFLTGSVLGFVGIFLRTQTGALK---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQHPQHTKSFCSIVREAASGDKPRFLRVVCLAALNNALFYFHFVWLGTYLAELAPNPIRAQKAFSVTCVAQAVFIVGNPIWGAVGDSSGGASKRLRWNIAGVALTCFAPTCLLLLVGPGKVELSFLYAVLVGLVMGFGVSGNYYAWVCESLNDSPSRFLTTSVAYNLGAIVGGCTPMLASALAESDMLLAPILPLSALAVGTFVVLGSYEFGWQLSPALEKGQNIRGPEEGGFLSLPIGATAVEGATKKQKNAE 477
            +RA++TFTVFAGGFLMRP+GS+VLGAVGDKYGTAAALKWSI LMT+PT+VTG LPTY+K+G+AAPL+LT CRLLQGLSVGGELIGALLHT+D+SPAEHRGFFCGLVAVFGS+GNL+GSLVSV+MR A++ ++L+SWGWRIPFL GSVLG VGIFLRT+TGALK                                      XXXXXXXXXXXXXXXXXXXXXX     P H +SFC I+REAA+GDKPRF+RVV LAALNN+LFYF+FVWLGTY+AELAPNP+ A +AFSVTCVAQAVFI GNP WGA+GD  GG +KRLRWNI GV L+CF P CL LL+  G+  LSFL+A L GL+MGF VSGNYYAWVCESLN+SPSR LTTSVAYN+GA+VGGCTPMLASAL+ S + LAPILPLSA+A    VVLG YE+G  +    E G+   G EE  FL+L +     EG   K K A+
Sbjct:  151 VRAIQTFTVFAGGFLMRPVGSVVLGAVGDKYGTAAALKWSIGLMTVPTIVTGLLPTYSKIGLAAPLLLTLCRLLQGLSVGGELIGALLHTADHSPAEHRGFFCGLVAVFGSMGNLVGSLVSVLMRHALSKQELLSWGWRIPFLAGSVLGLVGIFLRTKTGALKHGGEAGRRPTREEQVLIEMVECPIAVEEETVAAYREAAXXXXXXXXXXXXXXXXXXXXXXAVAARPSHPRSFCGILREAAAGDKPRFIRVVVLAALNNSLFYFNFVWLGTYMAELAPNPLGAAQAFSVTCVAQAVFIFGNPFWGAMGDWGGGLAKRLRWNIVGVVLSCFLPPCLFLLLRSGRASLSFLFAALTGLLMGFTVSGNYYAWVCESLNESPSRVLTTSVAYNVGAVVGGCTPMLASALSASPIFLAPILPLSAVAAAVAVVLGRYEWGEYVKRKAEGGKG--GREE--FLALRV----EEGKEGKGKMAK 621          
BLAST of NO10G04080 vs. NCBI_GenBank
Match: XP_005854495.1 (major facilitator family transporter [Nannochloropsis gaditana CCMP526] >EKU21867.1 major facilitator family transporter [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 361.7 bits (927), Expect = 3.700e-96
Identity = 254/563 (45.12%), Postives = 298/563 (52.93%), Query Frame = 0
Query:    1 MRAVKTFTVFAGGFLMRPLGSIVLGAVGDKYGTAAALKWSIALMTIPTVVTGCLPTYAKVGIAAPLMLTACRLLQGLSVGGELIGALLHTSDNSPAEHRGFFCGLVAVFGSLGNLLGSLVSVIMRQAMTDEQLMSWGWRIPFLTGSVLGFVGIFLRTQTGALK-----------------------------------------------------------------------------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQHPQH-----------TK----------------------SFCSIVREAASGDKPRFLRVVCLAALNNALFYFHFVWLGTYLAELAPNPIRAQKAFSVTCVAQAVFIVGNPIWGAVGDSSGGASKRLRWNIAGVALTCFAPTCLLLLVGPGKVELSFLYAVLVGLVMGFGVSGNYYAWVCESLNDSPSRFLTTSVAYNLGAIVGGCTPMLASAL-AESDMLLAPILP 417
            ++ VKTFTVFAGGFLMRPLGS+VLGAVGDKYGTAAALKWSIALMTIPTVVTG LPTY KVG+AAPL+LT CRL+QGLSVGGELIGALLHT+D+SP   RG +CG+V VFGS+GNL+G++VSV MR+A+T+ +L+SWGWRIPFLTGSVLGFVG+ LRTQT  L+                                                                                                                 XXXXXXXXXXXXXXXXXXXXXXXX                                      P H           TK                      SF  I+R+AA  DK RFL VV LA L ++ FY HFVW+GTYLA LA  PI +  AFSV  V Q + I+  P WG +GD  GGA  R++W IAG+            L+  G    +F YAV+VGL MG  + GNY+AWV E+L DSP+R L+TSVAYNLGA+ GGC PML SAL A     +AP+LP
Sbjct:   98 IQVVKTFTVFAGGFLMRPLGSVVLGAVGDKYGTAAALKWSIALMTIPTVVTGLLPTYHKVGLAAPLLLTLCRLVQGLSVGGELIGALLHTADHSPPGRRGLYCGIVGVFGSVGNLIGAVVSVSMRKALTERELLSWGWRIPFLTGSVLGFVGVLLRTQTDGLRSKEEHKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGEGCDIFDVDLVEAAIHKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDTAANGQVPPSSVAMPMLPVARPLQATAPPSVKADADPAHGAAPLVKKRSRTKKILKKXXXXXXXXXXXXXXXXXSFLQILRDAAGTDKARFLHVVLLATLQSSQFYLHFVWVGTYLAVLARKPITSVAAFSVITVMQVLLILTGPFWGLMGDKYGGAKGRVKWLIAGIVCDIIMVPTAFSLLERGGESWAFAYAVMVGLTMGLSLGGNYHAWVTETLQDSPARVLSTSVAYNLGAMTGGCAPMLYSALSAYRFPQIAPVLP 660          
BLAST of NO10G04080 vs. NCBI_GenBank
Match: EWM25620.1 (major facilitator family transporter [Nannochloropsis gaditana])

HSP 1 Score: 361.7 bits (927), Expect = 3.700e-96
Identity = 250/563 (44.40%), Postives = 294/563 (52.22%), Query Frame = 0
Query:    1 MRAVKTFTVFAGGFLMRPLGSIVLGAVGDKYGTAAALKWSIALMTIPTVVTGCLPTYAKVGIAAPLMLTACRLLQGLSVGGELIGALLHTSDNSPAEHRGFFCGLVAVFGSLGNLLGSLVSVIMRQAMTDEQLMSWGWRIPFLTGSVLGFVGIFLRTQTGALK-----------------------------------------------------------------------------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQHPQH-----------TK----------------------SFCSIVREAASGDKPRFLRVVCLAALNNALFYFHFVWLGTYLAELAPNPIRAQKAFSVTCVAQAVFIVGNPIWGAVGDSSGGASKRLRWNIAGVALTCFAPTCLLLLVGPGKVELSFLYAVLVGLVMGFGVSGNYYAWVCESLNDSPSRFLTTSVAYNLGAIVGGCTPMLASAL-AESDMLLAPILP 417
            ++ VKTFTVFAGGFLMRPLGS+VLGAVGDKYGTAAALKWSIALMTIPTVVTG LPTY KVG+AAPL+LT CRL+QGLSVGGELIGALLHT+D+SP   RG +CG+V VFGS+GNL+G++VSV MR+A+T+ +L+SWGWRIPFLTGSVLGFVG+ LRTQT  L+                                                                                                                 XXXXXXXXXXXXXXXXXXXX                                          P H           TK                      SF  I+R+AA  DK RFL VV LA L ++ FY HFVW+GTYLA LA  PI +  AFSV  V Q + I+  P WG +GD  GGA  R++W IAG+            L+  G    +F YAV+VGL MG  + GNY+AWV E+L DSP+R L+TSVAYNLGA+ GGC PML SAL A     +AP+LP
Sbjct:   98 IQVVKTFTVFAGGFLMRPLGSVVLGAVGDKYGTAAALKWSIALMTIPTVVTGLLPTYHKVGLAAPLLLTLCRLVQGLSVGGELIGALLHTADHSPPGRRGLYCGIVGVFGSVGNLIGAVVSVSMRKALTERELLSWGWRIPFLTGSVLGFVGVLLRTQTDGLRSKEEHKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGEGCDIFDVDLVEAAIHKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEDREDTAANGQVPPSSVAMPMLPVARPLQASAPPSVEADADPAHGAAPLVKKRSRTKKILKXXXXXXXXXXXXXXXXXXSFLQILRDAAGTDKARFLHVVLLATLQSSQFYLHFVWVGTYLAVLARKPITSVAAFSVITVMQVLLILTGPFWGLMGDKYGGAKGRVKWLIAGIVCDIIMVPTAFSLLERGGESWAFAYAVMVGLTMGLSLGGNYHAWVTETLQDSPARVLSTSVAYNLGAMTGGCAPMLYSALSAYRFPQIAPVLP 660          
BLAST of NO10G04080 vs. NCBI_GenBank
Match: OEU23485.1 (MFS general substrate transporter [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 178.7 bits (452), Expect = 4.500e-41
Identity = 143/414 (34.54%), Postives = 213/414 (51.45%), Query Frame = 0
Query:    4 VKTFTVFAGGFLMRPLGSIVLGAVGDKYGTAAALKWSIALMTIPTVVTGCLPTYAKVGIAAPLMLTACRLLQGLSVGGELIGALLHTSDNSPAEHRGFFCGLVAVFGSLGNLLGSLVSVIMRQAMTDEQLMSWGWRIPFLTGSVLGFVGIFLRTQTGALKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQHPQHTKSFCSIVREAASGDKPRFLRVVCLAALNNAL--------FYFHFVWLGTYLAELAPNPIRAQKAF---SVTCVAQAVFIVGNPIWGAVGDSSGGASKRLRWNIAGVALTCFAPTCLLLLVGPGKVELSFLYAVLVGLVMGFGVSGNYYAWVCESLNDSPS-RFLTTSVAYNLG-AIVGGCTPMLASAL 405
            +K+F +F   FLMRP+G +++G +GDK+G   AL  S+ LM IPT + GCLPTY +VG+ + ++L  CRL+QG+SVGG+L  +L++T +  P    G++  L  V  ++G LLG++    MR  +T++QL++WGWRIPF +G ++  V  +LR     +       XXXXXXXXXXXXXX                                            HTK    I        K  F R   LA L+ ++        FY  FVW+  Y+ EL   PI  Q AF   S++ +    F++  PI G + D  G  S+     ++G+ LT   P C L+++  G    +FL  +L+GL++ F   G   AW+ E  N SP  R  + S+ Y++  AI GG +P +A+AL
Sbjct:   68 MKSFVIFGSAFLMRPIGGLIIGYIGDKHGRKEALTKSLFLMAIPTTLMGCLPTYKQVGVLSTILLCLCRLIQGISVGGQLPASLVYTVEKRPKSQWGYYGSLPMVAANVGTLLGNICGATMRSILTEQQLVTWGWRIPFFSGILIAVVSCYLRKYGTDVSDINVPQXXXXXXXXXXXXXXRI------------------------------------------HTKPHNPI--------KVAFRRENRLALLSTSITPMLWASGFYVSFVWIALYMEELMDPPI--QNAFWINSMSLLLGMTFVL--PIAGHISDRIG--SRIGMMTVSGILLTGLGPVC-LIVISKGNPVTAFLSQLLLGLLLSF-YGGPLCAWLVE--NFSPEVRMTSASIGYDISHAIAGGFSPAIATAL 421          
BLAST of NO10G04080 vs. NCBI_GenBank
Match: WP_090901232.1 (MFS transporter [Candidatus Nitrospira nitrificans] >CUS39067.1 General substrate transporter [Candidatus Nitrospira nitrificans])

HSP 1 Score: 166.4 bits (420), Expect = 2.300e-37
Identity = 134/431 (31.09%), Postives = 194/431 (45.01%), Query Frame = 0
Query:    4 VKTFTVFAGGFLMRPLGSIVLGAVGDKYGTAAALKWSIALMTIPTVVTGCLPTYAKVGIAAPLMLTACRLLQGLSVGGELIGALLHTSDNSPAEHRGFFCGLVAVFGSLGNLLGSLVSVIMRQAMTDEQLMSWGWRIPFLTGSVLGFVGIFLRTQTGALKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQHPQHTKSFCSI-VREAASGDKPRFLRVVCLAALNNALFYFHFVWLGTYLAELAPNPIRAQKAFSVTCVAQAVFIVGNPIWGAVGDSSGGASKRLRWNIAGVALTCFAPTC-LLLLVGPGKVELSFLYAVLVGLVMGFGVSGNYYAWVCESLNDSPSRFLTTSVAYNL-GAIVGGCTPMLASALAE-SDMLLAPILPLSALAVGTFVVLGS 431
            + TF VFA GFL RPLG+++ G  GD  G  AAL WSI LM  PT + G LPTYA++G+AAPL LT  R LQGLSVGGE  G++    +++    RG+          +G LLGS V  +    ++ E L  WGWRIPF+ GSV+  VG +LR +                                                                 +  Q T +  S  VRE  +  +   L+V+ L  L+   FY  FV+L TYL ++   P+      +  C+A    ++  P+ G + D  G      RW +AG A      T  L   +  G + L  +  VL+ L +     G ++A V  +L    SR+   S++YN+  A+ GG  P++A+ L E S   LAP   +   AV + + L +
Sbjct:   69 IATFGVFAVGFLARPLGALLFGYWGDTKGRRAALAWSIILMAFPTCLVGLLPTYAQIGLAAPLALTVLRFLQGLSVGGEFTGSVTFLVEHAGPTERGYVGSWAGFSAQIGALLGSGVGTLATANLSSEALQQWGWRIPFVAGSVIALVGWYLRRR----------------------------------------------------------IPESPAFERLQQTGAVSSSPVRELLTSHRAPLLQVIGLVLLHGVGFYIFFVFLPTYLTKVTDLPMGTTLLINTGCMALLAILI--PLMGKLSDRVGH-----RWVLAGGAAGLALGTVPLFSWLSGGHLALIVMAQVLITLFVS-AYMGPFFA-VVATLFPVASRYTGLSISYNIAAALFGGTAPLMATVLMERSGSALAPGWYVGLCAVLSLIALST 432          
BLAST of NO10G04080 vs. NCBI_GenBank
Match: PLY33267.1 (hypothetical protein CAF41_05995 [Nitrospira sp. CG24A])

HSP 1 Score: 162.2 bits (409), Expect = 4.300e-36
Identity = 131/443 (29.57%), Postives = 188/443 (42.44%), Query Frame = 0
Query:    4 VKTFTVFAGGFLMRPLGSIVLGAVGDKYGTAAALKWSIALMTIPTVVTGCLPTYAKVGIAAPLMLTACRLLQGLSVGGELIGALLHTSDNSPAEHRGFFCGLVAVFGSLGNLLGSLVSVIMRQAMTDEQLMSWGWRIPFLTGSVLGFVGIFLRTQTGALKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQHPQHTKSFCSIVREAASGDKPRFLRVVCLAALNNALFYFHFVWLGTYLAELAPNPIRAQKAFSVTCVAQAVFIVGNPIWGAVGDSSGGASKRLRWNIAGVALTCFAPTCLLLLVG---PGKVELSFLYAVLVGLVMGFGVSGNYYAWVCESLNDSPSRFLTTSVAYNLG-AIVGGCTPMLASALAE-SDMLLAPILPLSALAVGTFVVLGSYEFGWQLSPAL 442
            +  F VFA GFL RPLG+++ G  GD  G   AL W+I LM +PT + G LPTY  +G+ AP+ LT CR LQGLSVGGE  G+     +++PA  RG+          +G LLGS V  ++   + D+ L  WGWRIPF+ G ++  VG ++RT                                                                     Q      S +R+     +    ++  L  L+   FY  +V+L TYL  +   P+      +  C+     ++  P+ GA  D  G A   L    AG+AL  +   C L L     P  +    L  +LV   M     G ++A V E L  +  R+   SV YN+G A+ GG  P++A+ L E S  +LAP   LS  A  +  +L +        PAL
Sbjct:   90 ISAFGVFAIGFLARPLGAMLFGYWGDTLGRRNALAWAILLMAVPTCLVGLLPTYETIGVVAPIALTLCRFLQGLSVGGEFTGSATFLVEHAPASRRGYVGSWAGFSAQIGALLGSGVGAVLAANLADDTLHQWGWRIPFMMGGLIAVVGWYVRTGVPESPAFETIR---------------------------------------------------------QAGGLATSPIRDVFMTQRVAVAKLAGLVWLHGVAFYLLYVYLTTYLTTVTQVPLATVLVLNTGCMLLLALLI--PLMGAWSDRIGQA-PLLITGAAGIALLAY--PCFLWLTSNHLPRMIAAQVLLTLLVACYM-----GPFFATVTE-LFPTSQRYTGLSVGYNIGAALFGGTAPLVATFLIEWSGNVLAPAFYLSMCATVSLTILLTLRNRGPAQPAL 464          
BLAST of NO10G04080 vs. NCBI_GenBank
Match: PLY34541.1 (hypothetical protein CAF42_01140 [Nitrospira sp. CG24B])

HSP 1 Score: 161.4 bits (407), Expect = 7.400e-36
Identity = 126/430 (29.30%), Postives = 192/430 (44.65%), Query Frame = 0
Query:    4 VKTFTVFAGGFLMRPLGSIVLGAVGDKYGTAAALKWSIALMTIPTVVTGCLPTYAKVGIAAPLMLTACRLLQGLSVGGELIGALLHTSDNSPAEHRGFFCGLVAVFGSLGNLLGSLVSVIMRQAMTDEQLMSWGWRIPFLTGSVLGFVGIFLRTQTGALKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQHPQHTKSFCSIVREAASGDKPRFLRVVCLAALNNALFYFHFVWLGTYLAELAPNPIRAQKAFSVTCVAQAVFIVGNPIWGAVGDSSGGASKRLRWNIA-GVALTCFAPTCLLLLVGPGKVELSFLYAVLVGLVMGFGVSGNYYAWVCESLNDSPSRFLTTSVAYNL-GAIVGGCTPMLASALAE-SDMLLAPILPLSALAVGTFVVLGS 431
            + TF VFA GFL RPLG+++ G  GD  G  AAL WSI  M +PT + G LPTYA++G+AAPL+LTA R LQGLSVGGE  G++    +++    RG+          +G LLGS V  +    ++ E L  WGWRIPF+ GSV+  VG +LR +                                                                 +  Q      S VRE  +  +   L+V+ L  ++   FY  +V+L TYL ++   P+      +  C+A    ++  P  G + D  G      RW +A G A            +  G++ L     +L+ + +     G ++A +  +L    SR+   S++YN+  A+ GG  P++A+ + E S   LAP   +S  AV + + L +
Sbjct:   52 IATFGVFAVGFLARPLGALLFGHWGDTRGRRAALAWSIIFMALPTCLVGMLPTYAQIGLAAPLILTALRFLQGLSVGGEFTGSVTFLVEHAAPTERGYIGSWAGFSAQIGALLGSGVGTVATLNLSSEALQEWGWRIPFVAGSVIALVGWYLRRR---------------------------------------------------------IPESPAFERLQQSGVVSSSPVRELFTSHRAPLLQVIGLVLVHGVGFYIFYVFLPTYLTKVTDLPMGTALLINTVCMALLAMLI--PCMGKLSDRVGH-----RWVLALGAAGLALGAVPFFSWLSSGQLTLIVTAQILITVFVS-AYMGPFFA-IVATLFPVASRYTGLSISYNIASALFGGTAPLMATVIMERSGSALAPGWYVSLCAVLSLIALST 415          
BLAST of NO10G04080 vs. NCBI_GenBank
Match: XP_002287760.1 (transporter, partial [Thalassiosira pseudonana CCMP1335] >EED95203.1 transporter, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 161.0 bits (406), Expect = 9.600e-36
Identity = 128/430 (29.77%), Postives = 197/430 (45.81%), Query Frame = 0
Query:    4 VKTFTVFAGGFLMRPLGSIVLGAVGDKYGTAAALKWSIALMTIPTVVTGCLPTYAKVGIAAPLMLTACRLLQGLSVGGELIGALLHTSDNSPAEHRGFFCGLVAVFGSLGNLLGSLVSVIMRQAMTDEQLMSWGWRIPFLTGSVLGFVGIFLRTQTGALKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQHPQHTKSFCSIVREAASGDKPRFLRVVCLAALNNAL----FYFHFVWLGTYLAELAPNPIRAQKAFSVTCVAQAVFI-VGNPIWGAVGDSSGGASKRLRWNIAG-VALTCFAPTCLLLLVGPGKVELSFLYAVLVGLVMGFGVSGNYYAWVCESLNDSPSRFLTTSVAYNLGAIVGGCT-----PMLASALAESDMLLAP--ILPLSAL 421
            +K+F V+ G FLMRP+G +++G +GDKYG   AL  S+ LM +PT + GCLPTYA+VG  +  +L  CRL QG+SVGG+L  +L++T +  P +  GF+  LV +  ++G LLG+ V  ++R  +TDEQL SWGWRIPF +G ++  V  +LR                                                                     P+H       +REA   D       +C A L   L    FY  FVW+  ++ ++   PI  + AF +  +     + +  P+ G + D  G    R+R  + G + L    P  +L+++  G+   +F     +GL++     G   AW+ E     PS+   TS A  LG  +  CT     P++A+ LA+    +AP  I P  A+
Sbjct:   55 MKSFAVYGGAFLMRPIGGMLIGTMGDKYGRKHALVISLFLMAVPTFLMGCLPTYAQVGSLSTALLVICRLAQGMSVGGQLPASLIYTVEMRPKQKWGFYGSLVMMAANVGTLLGNFVGALLRTVLTDEQLHSWGWRIPFWSGLLIALVAAYLRLH----------------------------------------------GEEHHPNEGEYDNNGESEHSQPKHP------LREAVQRDN---WTALCSATLTTMLWGAGFYVSFVWMAIFMQDIMDPPI--ENAFWINSMTLLFGVTLPLPLMGWISDYFG----RVRTMVIGALGLGALGP-IMLMIISHGRPVQAFFAQWTIGLLLSI-FGGPISAWLVEKF---PSKVRATSAA--LGYDLAHCTASAFSPLVATVLAQKVSPVAPGVIYPFFAI 416          
BLAST of NO10G04080 vs. NCBI_GenBank
Match: XP_002186229.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >ACI65699.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 159.5 bits (402), Expect = 2.800e-35
Identity = 126/458 (27.51%), Postives = 204/458 (44.54%), Query Frame = 0
Query:    4 VKTFTVFAGGFLMRPLGSIVLGAVGDKYGTAAALKWSIALMTIPTVVTGCLPTYAKVGIAAPLMLTACRLLQGLSVGGELIGALLHTSDNSPAEHRGFFCGLVAVFGSLGNLLGSLVSVIMRQAMTDEQLMSWGWRIPFLTGSVLGFVGIFLRTQTGALKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQHPQHTKSFCSIVREAASGDKPRFLRVVCLAALNNALFYFHFVWLGTYLAELAPNPIRAQKAFSVTCVAQAVFI-VGNPIWGAVGDSSGGASKRLRWNIAGVALTCFAPTCLLLLVGPGKVELSFLYAVLVGLVMGFGVSGNYYAWVCESLNDSPSRFLTTSVAYNLG-AIVGGCTPMLASALAESDMLLAPILPLSALAVGTFVVLGSYEFGWQLSPALEKGQNIRGPEEGGFLSLP 460
            VK+F VF G FLMRP+G +++G +GD YG   AL  SI LM  PT   GCLPTY +VG  A ++L   RLLQGLSVGG+L+ +L+ T +       G +   V    +LG LLG L    +R  ++ EQL++WGWR+PF +G ++ F G +LR+                                                                    P   +         AS ++   L    +  L ++ FY  FVW+  ++ +L  +P+    AF V   A  + + +  P+ G + D  G   +R    I GV++   +P  L+L++G G    + +    +G+ + F       AW+ E+  +  +R  + ++ YNL  A VGG TP +A+ + +S  + +P   L+ L++ +   L      W ++P +          +  F +LP
Sbjct:  121 VKSFAVFGGAFLMRPIGGVMMGYIGDVYGRKRALVLSIFLMAFPTFAMGCLPTYEQVGAFAIVLLVIVRLLQGLSVGGQLMSSLVFTLETHETTQWGLYGSFVMAGANLGTLLGGLAGYALRSFLSYEQLVAWGWRLPFWSGILVSFSGFYLRSHENV-----EDDQNSRHCVASTRAAAPSGTNTIRDSQNSSDVGADHNTPLPVVKSSDDCEPIIPAISPPNPLRI------AFASQNRRSLLAAALVPMLWSSGFYLSFVWMAIFMEDLIESPV--PHAFGVNSAALLISVCLFFPVAGILSDRYG---RRFVMTIGGVSVGVLSP-ILVLVIGKGNALNALVAQSSLGVALSFW-GAPMCAWLVEAF-EPAARLTSVAIGYNLAQATVGGLTPSVATIMVDSVGVNSPGWILTVLSILSLTGL------WIVAPPVGASPPASSTRKRTFQALP 553          
The following BLAST results are available for this feature:
BLAST of NO10G04080 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005854492.11.400e-15967.57major facilitator superfamily mfs 1 [Nannochlorops... [more]
EWM25616.11.800e-15967.43major facilitator superfamily protein [Nannochloro... [more]
XP_005854495.13.700e-9645.12major facilitator family transporter [Nannochlorop... [more]
EWM25620.13.700e-9644.40major facilitator family transporter [Nannochlorop... [more]
OEU23485.14.500e-4134.54MFS general substrate transporter [Fragilariopsis ... [more]
WP_090901232.12.300e-3731.09MFS transporter [Candidatus Nitrospira nitrificans... [more]
PLY33267.14.300e-3629.57hypothetical protein CAF41_05995 [Nitrospira sp. C... [more]
PLY34541.17.400e-3629.30hypothetical protein CAF42_01140 [Nitrospira sp. C... [more]
XP_002287760.19.600e-3629.77transporter, partial [Thalassiosira pseudonana CCM... [more]
XP_002186229.12.800e-3527.51predicted protein [Phaeodactylum tricornutum CCAP ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL056nonsL056Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR004ncniR004Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR016ngnoR016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK009198NSK009198Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO10G04080.1NO10G04080.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO10G04080.2NO10G04080.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|540465gene_3796Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100251g5gene4890Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO10G04080.1NO10G04080.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO10G04080.2NO10G04080.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO10G04080 ID=NO10G04080|Name=NO10G04080|organism=Nannochloropsis oceanica|type=gene|length=3695bp
TGCAGGGGAGGTTTTCCAAGGTATCATTTTTATAAGCATGTTTTGCTTCT
GCCCTTTCTATTAGGTGATCACATAGAATGTTATAGACGATGTGCTTACC
TAATCGTCTTCAATAAGCAAAATGAACTCTGTGCTAGGCACGAAGGGTGG
AGTGAGACAGTATTTGATTGAAGCTGGCGAACGAGCATGGGCCGGCCAGA
TGCCTGATTACTGTAGTGCCCTGCGCATGGCCTTTTCAGTGGACCAAAGT
TTAGCATATGCAGATCCTTCCTCCACCTCTCTTGATTTCGACTGCCCCTT
GACCATTCGTTTAATAGTTTTTGCAGACAAACCTTTCCTTCAATTCTGAA
TGAATACTTGCCCTAGGGAGCATCCCTCGGCGACTCGATCCACCCGGCCC
GACGATATTGCACCCACAGAACAACGTCCTCGACGCCGCTCGTTCATACA
TGCCACCAAATATTCTGGACCTCTGTCACCAGGAAGGGTGAAAACCCTCG
ACACATTACAGACACATGCAATCTATTGCTCTGTTTGGCCTGCCTTTTTT
CGTGGATTGTGGCTGTAATATAGCAAGGCCTGGCGAGATTCGCCCGTCAC
TCTCCCCTTCCTCTCGCGCTGCGTCCGAATCGAGTCGACCCTGTCAAAGC
CCCATCCAAGTGCTCACCCAGCCATCGTACATGCACCCACACCCACAGAC
ACCTTGAACTGCGATTCTGCTCAGTTGCAGTCGTGCCGTGCAGGCCTTTT
CTGACTCTTGACAACTCTAGGCTCAGCCAGTCCTCAAAGCAAGCAAAGCC
CACAAAAGTGGGTGCTGTTTACCCTGACAGGACGTGCTGTCTCCCTACTA
CCGTACACCCTACCAGACAAAGCACGCTCGGCCTTGGCAGGACCTTTCCT
AGATATGGAAGCCGACGCGAAAGGCAGCACCACCAGCAGCGGTAGCAACA
AGAAGCTGGTCGATATCGCCCTCTCCCCGTCCCATAACAAGAGCGGTAGT
AGCAAGACCACGGTTGTGGTGCGGTGCTGCGGGGAGGCAGACAGCATCAC
TGATGTCGGGgtaaggaatattgtcgcgtacacgaaaaattcggagaaag
gaggagaaattagggagaacaatatgctttacatgcctgcactcacttct
ctttcttcttcccgtagGCTACTGACAGCATTGACAGCCTGGCCAGCAGC
GGCACCGGCACGCCCTCTTCCTTGTCCAGTCCGAGTAACAAGAAGCGGAG
CGATGGGTATACATTGGCCTTGCTGGCGGCCATCATGGGGAATGTCCTCG
AGTTTTACGATTTCAGGTAATACTTGTATCACTGGTCTCACTAGAGGGTG
AGACAGTGGATGGTCCTGTAGTTGTTCTCGGTCTTTTCTTTTTCGTCACT
CCACAGATTGCTACACTTGCTCTCTCCCTTTCTCAACTCACCTTTCCCTG
TCCTCCCTTCCTTCTTACCCCGAACCGTTTCCCCCATTTAGTGTGTACGC
TTTCTTCGCTCCCGAGATCGGCAAGCTTTTTTTCCCGGCAGgtacgttgc
ctctggacgtgcaaatgaaagagtatacgatggatatggtaacagcatag
attaaacagcactagagccaaggatgaaaacttgtgagcgcgatctcaag
agccttaactccctaccgccctccttcccttccccactccgcactccagG
CAACCCGGCCATGCGCGCCGTCAAGACCTTCACCGTCTTCGCGGGCGGCT
TCCTCATGCGGCCCCTCGGCTCCATCGTCTTGGGTGCCGTGGGCGACAAG
TACGGCACTGCTGCCGCCCTCAAGTGGTCCATTGCTTTAATGACCATCCC
AACTGTCGTGACCGGCTGCCTCCCTACCTACGCGAAAGTCGGGATTGCCG
CTCCCCTCATGCTCACCGCCTGCCGACTCTTGCAGGGCTTGTCGGTGGGC
GGAGAGCTGATCGGAGCCTTGCTGCACACGTCGGACAATTCTCCCGCGGA
GCATCGAGGGTTTTTCTGCGGCCTGGTGGCAGTGTTCGGTAGCTTGGGCA
ATCTCTTGGGGTCGCTGGTGAGTGTAATCATGCGACAGGCTATGACAGAT
GAGCAATTGATGAGCTGGGGCTGGCGTATTCCTTTCTTGACGGGCTCGGT
GCTAGGTTTTGTGGGCATCTTCCTCAGGACCCAGACGGGGGCCTTGAAGG
AGGGAGGGGGAGGGGGAGGGGAGGAACATCGAGTTATGGTGGAGTTGATG
GAGACCCCGGCGGCGGTCGAAGAAGAGCTGATCGCCGAGTACCACCACGC
GGCTATGGGGGAGGAGGAGGGGGAGGAGGAGAGAGGTCTGGAGGGAGGAA
AGGCCACCACGCACTCACACCGGCAGCAGCAGCACCCACAGCACACCAAG
TCGTTTTGTAGCATTGTCCGGGAGGCGGCCTCGGGGGACAAGCCTCGTTT
CCTCCGGGTCGTGTGTCTAGCCGCCCTCAACAATGCCCTCTTCTACTTCC
ACTTCGTCTGGCTCGGGACCTACTTGGCCGAGCTCGCCCCCAACCCCATT
CGGGCGCAAAAGGCCTTCAGTGTGACCTGCGTGGCGCAGGCCGTTTTTAT
CGTCGGCAATCCCATCTGGGGCGCCGTCGGTGACAGTTCTGGCGGCGCCA
GCAAGCGCCTCCGGTGGAACATCGCCGGTGTCGCCCTCACCTGCTTCGCC
CCTACCTGTCTCCTTCTCCTCGTGGGCCCCGGTAAGGTCGAGCTATCTTT
CTTGTACGCGGTGCTTGTGGGCTTGGTCATGGGCTTTGGTGTGTCAGGAA
ACTACTACGCCTGGGTGTGCGAATCTTTGAACGACTCCCCCTCCCGCTTC
CTGACCACCAGTGTCGCCTATAACCTGGGGGCAATCGTGGGAGGGTGCAC
GCCCATGCTGGCCAGTGCCTTGGCCGAGAGCGATATGCTGTTGGCGCCCA
TCTTGCCTCTCTCGGCTCTGGCAGTGGGGACATTTGTCGTGCTAGGCTCC
TACGAGTTTGGCTGGCAGCTGTCGCCAGCCTTAGAGAAGGGGCAGAATAT
AAGAGGGCCGGAGGAGGGTGGGTTTCTGTCGCTGCCCATTGGAGCGACGG
CGGTAGAAGGGGCGACGAAGAAACAGAAGAATGCAGAGAATTTGAAACAG
AGGAATGTGAAGGGAGCAGGGGTAGGGGAGGAGGAAGGGATGCAGATGGT
GAGGAAGGAAGGGCTATAGCAGCTATCTTCCTCCTCCCCCTTGAATCATT
CCATTGATTGTAATGGAGGGGTTTGGATTGGAAGACAGGAGCTGAAGAGA
GGGAAGAGGGGAGGAGGGGAGGAGGGAGGGCGAATGTACAAAATGGAATT
TTGAATATAAATGGTACAGCAGGAGTACAGCAGCAGCTGGACCTGGGCCT
CTGTCTGACATAAATGAGAAAGCAATACAGAGAGGTGATGAAGAGTTCGG
GCCATGAGAAGGTGTGAGTGAGAGAATGTCTCAGACATGTGGAGGGCCCC
CGTGGTTGGAGAGGAAGTGCAATTGAGGGGAAGCAAAAAAGAGCCATGGA
GCTTTCGTGCATAGGGACGCGATGAAGATGTGCGGCAATAACACGCACAG
CCTTTTTAGACAACGCACGCAAAGAGCGAGAAAAGGGGTGAGGGACTGGA
AGTAGACTCACTTGTGCGCAGGTGTTATCCGGATAATTATAAATA
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protein sequence of NO10G04080.1

>NO10G04080.1-protein ID=NO10G04080.1-protein|Name=NO10G04080.1|organism=Nannochloropsis oceanica|type=polypeptide|length=625bp
MEADAKGSTTSSGSNKKLVDIALSPSHNKSGSSKTTVVVRCCGEADSITD
VGATDSIDSLASSGTGTPSSLSSPSNKKRSDGYTLALLAAIMGNVLEFYD
FSVYAFFAPEIGKLFFPAGNPAMRAVKTFTVFAGGFLMRPLGSIVLGAVG
DKYGTAAALKWSIALMTIPTVVTGCLPTYAKVGIAAPLMLTACRLLQGLS
VGGELIGALLHTSDNSPAEHRGFFCGLVAVFGSLGNLLGSLVSVIMRQAM
TDEQLMSWGWRIPFLTGSVLGFVGIFLRTQTGALKEGGGGGGEEHRVMVE
LMETPAAVEEELIAEYHHAAMGEEEGEEERGLEGGKATTHSHRQQQHPQH
TKSFCSIVREAASGDKPRFLRVVCLAALNNALFYFHFVWLGTYLAELAPN
PIRAQKAFSVTCVAQAVFIVGNPIWGAVGDSSGGASKRLRWNIAGVALTC
FAPTCLLLLVGPGKVELSFLYAVLVGLVMGFGVSGNYYAWVCESLNDSPS
RFLTTSVAYNLGAIVGGCTPMLASALAESDMLLAPILPLSALAVGTFVVL
GSYEFGWQLSPALEKGQNIRGPEEGGFLSLPIGATAVEGATKKQKNAENL
KQRNVKGAGVGEEEGMQMVRKEGL*
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protein sequence of NO10G04080.2

>NO10G04080.2-protein ID=NO10G04080.2-protein|Name=NO10G04080.2|organism=Nannochloropsis oceanica|type=polypeptide|length=503bp
MRAVKTFTVFAGGFLMRPLGSIVLGAVGDKYGTAAALKWSIALMTIPTVV
TGCLPTYAKVGIAAPLMLTACRLLQGLSVGGELIGALLHTSDNSPAEHRG
FFCGLVAVFGSLGNLLGSLVSVIMRQAMTDEQLMSWGWRIPFLTGSVLGF
VGIFLRTQTGALKEGGGGGGEEHRVMVELMETPAAVEEELIAEYHHAAMG
EEEGEEERGLEGGKATTHSHRQQQHPQHTKSFCSIVREAASGDKPRFLRV
VCLAALNNALFYFHFVWLGTYLAELAPNPIRAQKAFSVTCVAQAVFIVGN
PIWGAVGDSSGGASKRLRWNIAGVALTCFAPTCLLLLVGPGKVELSFLYA
VLVGLVMGFGVSGNYYAWVCESLNDSPSRFLTTSVAYNLGAIVGGCTPML
ASALAESDMLLAPILPLSALAVGTFVVLGSYEFGWQLSPALEKGQNIRGP
EEGGFLSLPIGATAVEGATKKQKNAENLKQRNVKGAGVGEEEGMQMVRKE
GL*
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Synonyms
Publications