NO10G03990, NO10G03990 (gene) Nannochloropsis oceanica

Overview
NameNO10G03990
Unique NameNO10G03990
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2182
Alignment locationchr10:1185968..1188149 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:1185968..1188149 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO10G03990 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR004ncniR004Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR016ngnoR016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO10G03990.1NO10G03990.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|585418gene_3808Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO10G03990.1NO10G03990.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO10G03990 ID=NO10G03990|Name=NO10G03990|organism=Nannochloropsis oceanica|type=gene|length=2182bp
ATCTTCCTCATCTTTAGTTGTTTCTATGTCCCGCCACTGCTTACCCTATT
GCCCTTCTCCATGCAGGACGCCTCATTTCTTTGGCACACTCCCAGCACTA
CTGCAGTTGCTGCTGCTGCCGCCGCCTGATCCTCATTTTTTGGCCCCTCC
CACAGAGGCAAATCCCCTTCCACCTCCTCATCTCCTTCTCCCCGTACTCC
TCAACAACCACCCTACATGTCCTCCGCCAGGTCGTTTTCGCCAAAGCTCG
TCATGGACAGACGCCCTCGGAGGCTTGGAGGGTTGGAGGGTAAAATGTGA
AGGTGCAAGGGAGGAGGAGGTCGAAGTATAGAATTTGGCGAGGCAGCGAG
GCAACGTCCATCTTCCTTCTATTCGGTCCTCCGCTACCCCACTGAGTGAC
ACAGGTCACAAATTGCATGGGAGTGGAGGGCATGCGGAGGGAGCGGGGGA
CAATTTTTCATTTATGTGTATGCGGTTTCCTCCCATTTGACGTCCACAAC
CCTAGTCTCATTTCATTCTCCCTCACCTCATAAAACCCCACACATTTGAA
CAGCTTGAAGGAGGACCCGTGCCTTCGTGACCAATATCGCAACTAGAAGG
CTGCTGATGGCGGTTCTCCTTGCTCAAGCCTCTCAGCTCCATTGACTTCC
TGCTACGAGCTATTCCCCCCTTGAAACATAAACGCGTGCACCCGCTCCCT
TCGACTTCGCATCTGTTCCCGTACGAACCATGTGTGAAGCCTTGGACGTC
CGCGGAGCCTTCGTTGTGGTTTTCATTTTCTTGGCATGACCCTAACTATT
CTTCGTGAGCAGTAGAGAAGGTGCTCCGGAGGTAGTCTCCTCGTTCTCTC
GGAAAAATGAAAGATGGAAAAGAAAGTGGGAAAGAGGAGTAGGGGTGATG
GGGAGAGAAGAGGGGAAAGAGGCTATCTCGCCTAGCAATAAGCGTGCGCT
TGGAGGAGATTATGATGGAGAATGGGCACGTGAATAATGGATGAGAATCA
CGTGGATAGATGGACGGGCGTGAGGGGGCACGTGTGGAAACGAGGAGAAA
ATCGAAAGGAGGAGAATTCGAGAAGACAGAGGGAAGAAAGACAGGAATAG
ACAGAAAGGGAAGATTGTCGGCTAGGAACCCTGAACCCTTTCAATGTGAC
TATAAGCAAGTCTTATATGAATGTTTTACGTGCCAATCACCTCGTCCTTA
GAATTGAACAGGGTCTTGGATCCGTCAATACTCTGGATTTGGAGGAAAAG
AGAGAGATCGCCTCGAATAGGCAAACGCAATTGCCCAACTCACACTTACA
TCACACATTCGCCACATAAGCCATACAGTGATAGCATGCAGCCACAACAA
GCGGCATTGGCGGACGATGAGAAGCTTCTCCAGATGCTGTATTGCAGCCT
CAAGCGGGCCATCGCCCCTTTGCACGAGACTGCAGGTCCAGATTCTCCGC
GCACCCCAACACCCTCCCCTCAGATCATCCCCTTGTTAAGTTTAGTCGTT
CTCGATGATAAGGGCCACGACGAAACCCTTCTCCTCACCCAGAATCACCC
CCTAAGTCAAAAGAACCCACTAACACTGGATCCTGCCCTGCAAACAAGTA
GCACCAACACCCGCGCCCTGGCGAGCCACTTGAATCAGGAGTTGCATCTT
GCTATGCAGGCAGACATTCCCTTAGGTGCCCGCGCCTACGAAATTTCCCA
AGCCGCCTTGTGCCTGCGAATCGCGCTCATGGAATCTACGGGAGTGGGAG
AGCGTGATACCGACACAAGCAGGGGGCCAAATATGATGCAGCAGCACGAG
AGGCTACAGCCACAGCTACAGGAACAACAGCAGCAATCGCATCAGCAGCC
AGGTGTGGCGGCGTCCGAAGGCTCACTAGCATCTGACTCGCTCATGCAGA
GGAAACGGCTGAAGACAAGGCAGAGTGAGGCCACGGGAAATTGTGCAGGG
CAAGGACAGGAGGAAGGGGATGAGAACGACGAAGATGAGTGGTACCACAG
GAACAAGGGGGCCAAGCCACTGTCACCAGTTGATTTCAAAATGGTGGTTG
GCGTATTATTTTCCCTTCATATCTTGGTGACCCAAGGGCCCCTGAATCTT
GTCTTATTTCTGGTGGCCTACTTAGTCATGTCCGCAGTTGTTAAGATGTT
GCTGGCGATTATGTCTTGATTCTCGCCGGTCC
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protein sequence of NO10G03990.1

>NO10G03990.1-protein ID=NO10G03990.1-protein|Name=NO10G03990.1|organism=Nannochloropsis oceanica|type=polypeptide|length=333bp
MFYVPITSSLELNRVLDPSILWIWRKRERSPRIGKRNCPTHTYITHSPHK
PYSDSMQPQQAALADDEKLLQMLYCSLKRAIAPLHETAGPDSPRTPTPSP
QIIPLLSLVVLDDKGHDETLLLTQNHPLSQKNPLTLDPALQTSSTNTRAL
ASHLNQELHLAMQADIPLGARAYEISQAALCLRIALMESTGVGERDTDTS
RGPNMMQQHERLQPQLQEQQQQSHQQPGVAASEGSLASDSLMQRKRLKTR
QSEATGNCAGQGQEEGDENDEDEWYHRNKGAKPLSPVDFKMVVGVLFSLH
ILVTQGPLNLVLFLVAYLVMSAVVKMLLAIMS*
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Synonyms
Publications