NO10G03970, NO10G03970 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO10G03970 vs. NCBI_GenBank
Match: EWM25601.1 (histone-lysine n- h3 lysine-36 and h4 lysine-20 specific [Nannochloropsis gaditana]) HSP 1 Score: 250.4 bits (638), Expect = 1.600e-62 Identity = 118/176 (67.05%), Postives = 130/176 (73.86%), Query Frame = 0 Query: 470 KDGGNLLECDWDLRDKHLHCKKVYHEYCLNYAVSTNPNVRWHCPRHLCAACAEKKINFCCRYCPNSYCLAHVPALAHRITDQPKPRELAAPHLQEIVCPDCVRLVIRARYRQELKPGFCSVVDDI-----QHGYIDSLSQPRHWKEFG-------VRPFHSVLETRFVVEGHSLPW 634 +DGGNLLECD DLRDK +HCKKVYHEYCLNY VSTNPNVRW+CPRHLCA C EK+I CCRYCPNSYC HVP LA I +Q KPREL+ LQEI CPDCV LVIRAR+RQELK GFCSVVDDI G I++ P +E G VRPFH VL+T FV EGH +PW Sbjct: 9 QDGGNLLECDHDLRDKSIHCKKVYHEYCLNYTVSTNPNVRWYCPRHLCAVCGEKRIRHCCRYCPNSYCQEHVPPLAFPIAEQLKPRELSHHQLQEISCPDCVCLVIRARFRQELKSGFCSVVDDILDHYLHFGQIETEGGPEGKEEVGKKRERARVRPFHPVLQTCFVAEGHEVPW 184
BLAST of NO10G03970 vs. NCBI_GenBank
Match: XP_008865026.1 (hypothetical protein H310_03060 [Aphanomyces invadans] >ETW06951.1 hypothetical protein H310_03060 [Aphanomyces invadans]) HSP 1 Score: 102.4 bits (254), Expect = 5.400e-18 Identity = 62/153 (40.52%), Postives = 83/153 (54.25%), Query Frame = 0 Query: 431 SLPPVDVSKDHLDFFGQYVRYI---KDLSIPNKDTENSCFLCKDGGNLLECDWDLRDKHLHCKKVYHEYCLNYAVSTNPNVRWHCPRHLCA--ACAEKKINFCCRYCPNSYCLAHVPALAHRITDQPKPRELAAPHLQEIVCPDCVRLVIRAR 579 S PP+D +D L +F YV+ I + P K +E+SCF CKDGG+L+ECD+ KH C KVYH CL ++V +V W CPRHLCA C F CR+CP ++C HVPA + + P ++ C D + L IR R Sbjct: 445 SPPPID-PQDGLTYFVSYVQSILHRETRRSPPKLSEDSCFCCKDGGDLIECDF--VGKH-RCPKVYHVDCLGFSVP--DDVTWTCPRHLCAFPKCTHVS-KFICRFCPVAHCEKHVPATSTVLCPTPPDTHAGTSYVLCASCGDQITLAIRRR 590
BLAST of NO10G03970 vs. NCBI_GenBank
Match: XP_009834965.1 (hypothetical protein H257_10196 [Aphanomyces astaci] >ETV75834.1 hypothetical protein H257_10196 [Aphanomyces astaci]) HSP 1 Score: 100.9 bits (250), Expect = 1.600e-17 Identity = 58/160 (36.25%), Postives = 86/160 (53.75%), Query Frame = 0 Query: 431 SLPPVDVSKDHLDFFGQYVRYI---KDLSIPNKDTENSCFLCKDGGNLLECDWDLRDKHLHCKKVYHEYCLNYAVSTNPNVRWHCPRHLCA--ACAEKKINFCCRYCPNSYCLAHVPALAHRITDQPKPRELAAPHLQEIVCPDCVRLVIRARYRQELKP 586 S PPVD +D L +F Y + + + P K +E+SCF CKDGG+L+ECD+ + K C KVYH CL + V +V W CPRH CA C + + CR+CP ++C H+PA + + P P ++C C +++A +R+ L P Sbjct: 431 SWPPVD-PQDSLTYFTSYAQAVIHRETRRTPPKLSEDSCFCCKDGGDLIECDFKAKIK---CPKVYHVDCLGFDVP--DDVTWICPRHYCAFPKCTQVS-KYSCRFCPAAHCEKHLPASSVLLFPTPPDTH---PSTSYVLCESCDVQIVQAVHRRLLPP 580
BLAST of NO10G03970 vs. NCBI_GenBank
Match: ETI31743.1 (hypothetical protein F443_21333 [Phytophthora parasitica P1569] >ETK72119.1 hypothetical protein L915_20735 [Phytophthora parasitica] >ETL25549.1 hypothetical protein L916_20618 [Phytophthora parasitica] >ETL78763.1 hypothetical protein L917_20480 [Phytophthora parasitica] >ETM32035.1 hypothetical protein L914_20488 [Phytophthora parasitica] >ETO60455.1 hypothetical protein F444_21356 [Phytophthora parasitica P1976] >ETP01543.1 hypothetical protein F441_21231 [Phytophthora parasitica CJ01A1] >ETP29716.1 hypothetical protein F442_21172 [Phytophthora parasitica P10297]) HSP 1 Score: 94.7 bits (234), Expect = 1.100e-15 Identity = 48/146 (32.88%), Postives = 76/146 (52.05%), Query Frame = 0 Query: 442 LDFFGQYVRYIKDLSIPN--KDTENSCFLCKDGGNLLECDW-DLRDKHLHCKKVYHEYCLNYAVSTNPNVRWHCPRHLCAACAEKKINFCCRYCPNSYCLAHVPALAHRITDQPKPRELAAPHLQEIVCPDCVRLVIRARYRQELK 585 +D+ Y +++ + I + +++E+ CF CKDGG+++ECDW + C KVYHE CL Y V W CPRH C C ++ CRYC SYC H+P R+ K P ++CP C ++ A +++++ Sbjct: 454 IDYLVTYFKFLLEREITDEFEESEDVCFCCKDGGDVIECDWKGMNGAFARCPKVYHEDCLGYEVPEGKT--WVCPRHRCQDCG-IIAHYSCRYCVTSYCQDHLPKEVKRLGHATKD----IPTSTYVMCPRCTQMAKDALKQKKIE 592
BLAST of NO10G03970 vs. NCBI_GenBank
Match: XP_008915031.1 (hypothetical protein PPTG_18890 [Phytophthora parasitica INRA-310] >ETM99652.1 hypothetical protein PPTG_18890 [Phytophthora parasitica INRA-310]) HSP 1 Score: 94.7 bits (234), Expect = 1.100e-15 Identity = 48/146 (32.88%), Postives = 76/146 (52.05%), Query Frame = 0 Query: 442 LDFFGQYVRYIKDLSIPN--KDTENSCFLCKDGGNLLECDW-DLRDKHLHCKKVYHEYCLNYAVSTNPNVRWHCPRHLCAACAEKKINFCCRYCPNSYCLAHVPALAHRITDQPKPRELAAPHLQEIVCPDCVRLVIRARYRQELK 585 +D+ Y +++ + I + +++E+ CF CKDGG+++ECDW + C KVYHE CL Y V W CPRH C C ++ CRYC SYC H+P R+ K P ++CP C ++ A +++++ Sbjct: 454 IDYLVTYFKFLLEREITDEFEESEDVCFCCKDGGDVIECDWKGMNGAFARCPKVYHEDCLGYEVPEGKT--WVCPRHRCQDCG-IIAHYSCRYCVTSYCQDHLPKEVKRLGHATKD----IPTSTYVMCPRCTQMAKDALKQKKIE 592
BLAST of NO10G03970 vs. NCBI_GenBank
Match: KUG02283.1 (Histone-lysine N-methyltransferase NSD3 [Phytophthora nicotianae]) HSP 1 Score: 94.7 bits (234), Expect = 1.100e-15 Identity = 48/146 (32.88%), Postives = 76/146 (52.05%), Query Frame = 0 Query: 442 LDFFGQYVRYIKDLSIPN--KDTENSCFLCKDGGNLLECDW-DLRDKHLHCKKVYHEYCLNYAVSTNPNVRWHCPRHLCAACAEKKINFCCRYCPNSYCLAHVPALAHRITDQPKPRELAAPHLQEIVCPDCVRLVIRARYRQELK 585 +D+ Y +++ + I + +++E+ CF CKDGG+++ECDW + C KVYHE CL Y V W CPRH C C ++ CRYC SYC H+P R+ K P ++CP C ++ A +++++ Sbjct: 454 IDYLVTYFKFLLEREITDEFEESEDVCFCCKDGGDVIECDWKGMNGAFARCPKVYHEDCLGYEVPEGKT--WVCPRHRCQDCG-IIAHYSCRYCVTSYCQDHLPKEVKRLGHATKD----IPTSTYVMCPRCTQMAKDALKQKKIE 592
BLAST of NO10G03970 vs. NCBI_GenBank
Match: XP_002909971.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY54092.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 92.4 bits (228), Expect = 5.600e-15 Identity = 49/144 (34.03%), Postives = 70/144 (48.61%), Query Frame = 0 Query: 430 SSLPPVDVSKDHLDFFGQYVRYIKDLSIPNKDTENSCFLCKDGGNLLECDW-DLRDKHLHCKKVYHEYCLNYAVSTNPNVRWHCPRHLCAACAEKKINFCCRYCPNSYCLAHVPALAHRITDQPKPRELAAPHLQEIVCPDCVR 573 S + P+D + + F + ++ ++ ++E+ CF CKDGGN++ECDW L C KVYHE CL Y V W CPRH C C + CR+C SYC H+P R+ K P ++CP C + Sbjct: 311 SDMQPIDYAVTYFKFLLE-----RETTVEFAESEDVCFCCKDGGNVIECDWKGLNGAFARCPKVYHEDCLGYEVPEGKT--WVCPRHRCQDCG-IIAHHSCRFCVTSYCQDHLPKEVKRLGRATKD----IPTSTYVMCPRCTQ 442
BLAST of NO10G03970 vs. NCBI_GenBank
Match: OQR96158.1 (hypothetical protein ACHHYP_16919 [Achlya hypogyna]) HSP 1 Score: 92.4 bits (228), Expect = 5.600e-15 Identity = 50/127 (39.37%), Postives = 64/127 (50.39%), Query Frame = 0 Query: 462 TENSCFLCKDGGNLLECDWDLRDK-HLHCKKVYHEYCLNYAVSTNPNVRWHCPRHLCAACAEKKINFCCRYCPNSYCLAHVPALAHRITDQPKPRELAAPHLQEIVCPDCVRLVIRARYRQELKPGF 588 +E+SCF CKDGG L+ECD + K + C KVYH+ CLN+ + W CPRH C C+ + CCR+C +YC HVP A I P L P +VC C A RQ L + Sbjct: 403 SEDSCFCCKDGGVLIECDHTTKSKGGVRCPKVYHKDCLNHPIPDKGT--WRCPRHFCFKCSAAS-SVCCRFCAMAYCDKHVPRSAQII----GPAFLDLPGATYMVCSSCEEQFDEATARQLLPDAY 522
BLAST of NO10G03970 vs. NCBI_GenBank
Match: GAX95038.1 (Hypothetical protein PINS_002916 [Pythium insidiosum]) HSP 1 Score: 90.9 bits (224), Expect = 1.600e-14 Identity = 48/139 (34.53%), Postives = 74/139 (53.24%), Query Frame = 0 Query: 442 LDFFGQYVRYI---KDLSIPNKDTENSCFLCKDGGNLLECDWDLRDKHLHCKKVYHEYCLNYAVSTNPNVRWHCPRHLCAACAEKKINFCCRYCPNSYCLAHVPALAHRITDQPKPRELAAPHLQEIVCPDCVRLVIRA 578 +D+ Y ++ ++ P ++E+ CF C+DGG+L+ECDW+ R + + C KVYHE CL +AV +W CPRH C C F CR+C SYC H+ ++ P REL ++C C ++ + A Sbjct: 488 VDYAANYFAFVTGRENQQPPPNESEDVCFCCRDGGDLIECDWETR-RGVRCPKVYHEDCLGFAVP--EKAKWICPRHRCYECG-FPAQFSCRFCVTSYCRDHLLKEIKKL--GPASREL--EKTTYVLCSKCDQMSLTA 618
BLAST of NO10G03970 vs. NCBI_GenBank
Match: OWZ02634.1 (Histone lysine N methyltransferase [Phytophthora megakarya]) HSP 1 Score: 90.5 bits (223), Expect = 2.100e-14 Identity = 50/140 (35.71%), Postives = 68/140 (48.57%), Query Frame = 0 Query: 432 LPPVDVSKDHLDFFGQYVRYIKDLSIPNKDTENSCFLCKDGGNLLECDW-DLRDKHLHCKKVYHEYCLNYAVSTNPNVRWHCPRHLCAACAEKKINFCCRYCPNSYCLAHVPALAHRITDQPKPRELAAPHLQEIVCPDC 571 + P+D + + F R +KD +++E+ CF CKDGG+++ECDW + C KVYHE CL Y V W CPRH C C F CR+C SYC H+P R+ K P ++CP C Sbjct: 428 MQPIDYAVTYFKFL--LKREVKD---EFEESEDVCFCCKDGGDVIECDWKGMNGAFARCPKVYHEDCLGYEVPEGKT--WVCPRHRCQDCG-IIAQFSCRFCVTSYCQDHLPKEVKRLGHATKD----IPTSNYVMCPRC 555 The following BLAST results are available for this feature:
BLAST of NO10G03970 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO10G03970 ID=NO10G03970|Name=NO10G03970|organism=Nannochloropsis oceanica|type=gene|length=5349bpback to top protein sequence of NO10G03970.1 >NO10G03970.1-protein ID=NO10G03970.1-protein|Name=NO10G03970.1|organism=Nannochloropsis oceanica|type=polypeptide|length=670bpback to top Synonyms
Publications
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