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Properties
| Property Name | Value |
|---|
| Description | WD40/YVTN repeat-like-containing domain protein |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr10 | genome | chr10:1158302..1165106 + |
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Homology
BLAST of NO10G03930 vs. NCBI_GenBank
Match: EWM25598.1 (WD40/YVTN repeat-like-containing domain protein [Nannochloropsis gaditana]) HSP 1 Score: 74.7 bits (182), Expect = 2.100e-9 Identity = 37/71 (52.11%), Postives = 48/71 (67.61%), Query Frame = 0
Query: 1 MHPKAELLFTTYKSSXXXXXXXXXLPPALRVLDVHPSKNWVAFVDEAATLFVYDYCSSSRLLRLPLPAVKD 72
M+P+ ELLFTT+K S +PP +RV+D+HP + VA VDEA TLFV+D+ +SS LLRLPL D
Sbjct: 1 MYPEVELLFTTHKHS--SLSSSSPVPPGIRVIDIHPCETRVAVVDEAGTLFVWDFATSSLLLRLPLAPAHD 69
The following BLAST results are available for this feature:
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO10G03930 ID=NO10G03930|Name=NO10G03930|organism=Nannochloropsis oceanica|type=gene|length=6805bp
TTATACGTCATGGCTGGACGCCTGCGCAAAGGAGGAATGGAAGAGGGAGA
AATGAGGGGGGAGGTTTTCATGAGCTCGCGTGCGTGCGTTTGGTTGAAAG
TGTCAGCTTGTCAAGAAAGGTTTAAGATTAATAAGGATGCGGCTGGATCA
GGGAGGGAACAAAGCCGATGTTTGTGCTGACGAGGGCGAAAGCACCGAGG
CAACACATTGGCAGCGGTGGCAGAAGGAATAACGAAATGCAGCAAATTAT
TTACTCCGCGACCGAAGGAAGCAAAACCCACCACTGCACCCCGCGGCATC
ATTTCCGCCTGTGCGCCATGCCATACTTGATGGTGTGTTAGGTCGTGGTA
ATCGGAGAGGTATGTGTGTTATAGATTGCGACACACAAGAGGCAATAAAC
TAAGGTGCATGTCGCATCACTAAGCCGACGATCGCTGTTTCTGTTCGCCT
CGCATTGCCCTCCCCCTCCCCAACAGCGTGCATGGCTGGCCCCAATCCAC
TGCTCACAACACAATCATAAATCGACAGGGGTAGCAAGGAAGGACCAGAT
CTCGTCCAGTCCATGCATCCAAAGGCGGAGCTCCTATTCACGACCTACAA
GTCCTCTTCCTCCTGGTCCTCGTCCTCCTCTTCACTGCCGCCGGTATGCT
CACGCCTCAAATCTCCTTTCCAATACACCACACCCTGACCTCTCACTCAT
ACACGTAGGCTCTCCGGGTCCTGGATGTCCACCCGAGCAAGAATTGGGTC
GCTTTTGTGGACGAGgtacgaaagaaacgagaggagaggggacattttaa
cggcagtcccaaccgcgtctcttccgaaagcgaagggggaaatgtaacag
caatcgaattgtcttgacaccaaactcctcaactatccaaaactttgcgt
cacgcacgacatccaacaacagGCCGCCACCCTCTTTGTCTACGATTACT
GCTCCTCCTCCCGTCTCCTCCGACTCCCCCTCCCAGCCGTCAAGGACGAA
CCCCAACGTCATGCCCGTCTGTACGCTTCCCTCGCCCCTCGTCCTTCCTC
CTCATCGTCATTCTCCTCCACCTCGAGATCAAAGAAGCGTGGAGGAGAAA
ACGAGGACGAGGAGGACGAGGAGGACGAGGAGGACGAAGAGGTGTGGCAA
CTCCGAAGGGAGAGGAGGAGAGAGGGCAAGATTCTGGCAGTCATCACTGA
GCGAGGGCGTACCACTGGGGGAGGGAAGGAAGGAGGGAAGCTTGGCGCGG
TGGAGGCGGTGCGGTTCGTGGATGAGgtgaggaacgagggagggatggag
ggagggaaggaggaaagggagggacgaaggctgatgacttattcgggcca
tatgaacggaaaacagGATGCGGCGATTATTCGCTCCTGCTGTCATTTCC
CTCTGGCTGAGGGGCCGGGAGGGCGAATGGATACGAGGGGAAAGACGTGG
GTCTGCGTCCGAACCAAGCACCGGCTGTTGCTAGTGGACGTTTGGAGCCG
AGAGgtaggaagggagggagggagggagggaagatagaagagggggccga
cgctgagactcatttcatcattccatacacctttatatagTGCCGGCACA
TCTCCGCCCAGGAGCTCCAGAAGACCACCCCTACTGCTGTTGAGgtactt
ccttaccctccctccctccctccctccctcggtgccttccctctccgagc
attcttgcctttcgcctttctccttgttcctcttcctcctcctcctcctc
ctcctcctcctccaccacctcgttctcttgcccctatgtttccctctgtt
tttggtttccccccctattcgtcactcttctcttgtggcaacagaagaaa
gcgatggagggaattgttacctccctgatccaactgcatccttatttatc
tacccccctgcttgacaagctgacactttcaaccaagatttctgacctcc
ctccctccctccctccctccctccctccctccccctcatcaacctcacaa
cagGGCGTCTCTCCATCTCTGCTGCTGGTGGGGGGCAGTGACGGAAATAT
GCGCCTCTGGGATATGGCCGAGTGGTCACTGGCGTCAACATGGCCAGGAG
GGCAGACCAGgtaggtagggagggagggagggagggagggagggagggag
ggaacgagggcgtgggaggctgcatacactcattatctctacttcttctc
aatcattttataccctgtgaacacagAGAGGTGGCCCATCTCCAGCTCCT
CCCTTCCTCTCCCTCGACCTCCTCCTCCTCCCAGGCCTCCTCCTCCCCCT
CCTTCATTCGGTTCCTCTCTGTGGGGAAAGAGGGAGGGGTTAGCCTATGG
CGTCTGAGCTACCCCGAAAAAGCCGGAATGgtcagtcacgcccttcactc
cctccctccctccctccctccctccctctcctcttaccgacatatgtttc
cacttcgaagccccttttgcttcccaatcactcgccccctccctccctcc
ctccctccctctagGCCCCAACCATTCAAACTATCGCTCGCCTCGAAGGC
AGCATTTCCCTCCCCTCCTCCCCGTCCCCCTCTTCCTCCTCCTCCTCCTC
CTCCTCCTCCTCCTCGCCCTTGGACTTCGTTTGTCGAGAGGAAACACTGA
GTGTCGTGGATGGCAACAGAATTGgtgaggaaaggaaagagggagggaag
gagggagcgaaggagggagggaaggcgcacgaaaactgactgcaccccat
ctcatctgacccctccctccctccctccctccctccctccctccctcccg
ccctccctccctcccgccctccctccctccctccctccctccctcccgct
ctccctccctccgtccggctagTTCACGTCTGGGATCTCTCCCCTCTCTC
CTCCTCCCTCCCCCTCCCTCTCTCCTCTCCTATCTCCAACCCACGCCGCC
TCTCCCCCCTTATGTTCCTCCCTCCCTCCCCCCCTCCCTCCTCCTCTGAC
CCTCCCCTCCTCTTCCCGCGGCTCCGGCGGCTCAAGATTCCTGCTCTCCC
CAAGTCCTCAGGAGgttagggagggagggagggagggagggagatgtggg
tagacagctttggtctcaaggacggaacggaatatcattattcatcctgc
cctccctccctccctccctccctcccttccttcctcccctcctcgtccag
GGGGTTCTTGCGTGGCCCTGGCCGCCATCAACCTCCTGTCCTCCTATCTC
TACCCCTCCCTTGCTCACCTCGGCATTTCCAAAgtaagtagagctcagac
tccttccttccctccctccctccctccctccctccttccctcaccggcct
tcgtatcactatgtcctcatccctccctccttccctcctcctctccctcc
ctccctccctccctccctccctccgtctctagAGCGGTGTTCTCTACGTC
TTTGACGACGCTGCTTCACCCTCCCTCCTCCCCACCACCAAGGAGGAGGG
AGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGAGTCAACTTTTC
TCGGTAGCCCTCGCGGAGGGAGGGAGGGAGGGAGGGAGGGAGCGGACTCT
CCCTCCCTCCAAAGTATAACAGGAACAGACGATGGCAGGAGCGAAGGAGG
ACGGGGAGGAGGAAGAGGGGGCCGAAGCAGCAGCAGCAGCAGCAGCAGCA
GCAGTAATACTCCAGCTCTTTTGACTATCGTAGAGGAGGTGGATCTGAGG
CCTTATTTATTCCCCTCCTCGTTTATGGCCGATCCGCCTCCTGCATTGGT
ACTTCCTATGCCTGGAGCACAAGGGGAAAGATCAGTGGGAGgtagggagg
gagggagggagggagggagggagggaggggggggggaaagacgatgcagg
ggatttcatagtttctcgtcttccttcttcttcttttcctccccctctcc
ctccttttttcttcctctttctttttctttttcgacgcctcttcctatcc
ttcgggactctagtctcctcttttcctctcggtctctgtgctcgttgcag
ccacaggctagtcctcaggccttcctccctccctccctccctccgttccc
gctgcagGTGGCAGTGGCGGTCCCTCGTCCTCCTCCTTCACCACCTCCTC
CTCTTTCTCCTCCAGCAGCAGCAGCAGCAGTAGCAGCGGTGGTGGACCAG
TGGGGCAGTGGACCGTCTCCTCCCTTCATGCGCATCCTACCCAGGCGCAT
ACGTTCGTGCTGGCCTCGTCACTCGgtagggagggagggagggagggagg
gagggagggagggagggagggagggtttgtcgagtgcgtcacaatcagac
atacggtcgcgtctgatccctccctctctccttccctccttccctccttc
cctccctcctttggcccacagGCCTCTGCGTCATCGCTTTCCATCGCACC
TCTCCCCTTACCACCTGCTTCCTCCCTTCCCTCCCTCCCTCCCTCCCTCC
CTCCCTCCTCCTCTATGACGAGAAGAGGAACCGCCTGCTCAAGGCGGGCA
TAGTCGTCAATGAGGGAGGGAGGGAGGGAGGGAGGAAGGAAGGGGCACGT
CTCACCTCCTCTATCCCCCCGTCTACGTCCTTCTCCCGCCAACCATCAAC
CTCCTCTCTCCCTCCATCCCTCCCTTCCTCCTCTGTGAGAGGAACACTGG
TTGACTCGATCCTTGCAACCCGCGTCCTGCCTGTCACTTCCGGGCCGGGC
GTGCCGCAGgtggggagggagggaggaaggaagggagggagggagggagg
gagggacagaggaaaatagacagagagacagagggagggagggaggaggg
aggcagggaggaagggaggggagggagggagggaggtcctttttctcacc
cgggcttgtacctcttctcactcggtccacagGCTCCAACGCTACAGGCT
TCCCTGGCCCGCCAGAACGCTGCCCGGAAAAAgtacgtcctccctccctc
cctccctcccaccctccctccctccattcctcctttcccactccctccct
ccctccctccctccctccctccctcccttcctccctcccacagACCCACT
CTCCTCCTCAGTCCATCCCATCGCTGTCTGTGCGTGTTCTGGCCAGCTGT
CCATTATTACACGCTATTTGCCCTCCCTCCCTCCTCCCCTCCCTCCTCCC
CTCCCTCCTCCCCTGCTTCCCCCGCGCTGTCTCACGGCTCATCGGGAGTG
TCGGACAAAAGTGGAGGAGGAAGGGGGGAGGGAGGGAGGGAGGGAGGGAG
GGAGGGAGCACGAGTGATCGAGAGCGGACCAGCCGTGTCTTGTTGTTTTC
TTGgtagggagggagggagggagggagggagggagggagggagggagggg
gagaggatagagacagcctgatctgtcatgtgatacgcagccatcaccac
cacacgaacacgacgctcaagcatccccccctccctccctccctcgcatc
agCTGGAAAGTCTCCCCGGGGCGAGGACTTATTCCTTCTCATCGCCCCGG
GCGCCGACCTCCGCGTTGGCGGGGACAGAGACAGCAAAAAGAGGGGCAGC
AGCCTCAAAGGACTCTTTCGgtacttgtcaaccttccctccttccctccc
tccctctcttcctccttcccttcctccattgtacacgtcttctctgagct
atcccctcatcaccttatgccctccctccctccctccctccctccctccc
tccctccctccctcccttcagCCGCAGCCAGGAACACGAGGCTGAAGTCT
CCTCCCACTTCCGGGTCGCGCCCACCCTGATCCTTAAATCGATCTCCTTC
CCTTCCTCCCCTTCCTCCCTCCCGCCCTGCCCCCCCTCTTCTCCCGCCGC
CTCCCCTTCCTCCCGCCCTCCCCCCCTCTCTCCTGCGGCTACTGCGGCTA
CTGCGGCTGCAGCTAAGGTGGCTCTCCTGGAAATGGAGGAAGAAGATAAA
GCACGCCTGCCTGCCCACATGCTGGAGgtaggggggagggggggagggag
ggagggagacgtaaaataatcgtcatgctcactcatattcacccatcacc
ctccctccctccctccctccctccctccctccctccctccctccctccct
ccctagCTCCTCACTGACAACAGCTGTGGTCCTCCCGGCGTCTTTTGCCT
CGGAGGCCTCATCCCTCAGGAGGGGGGGAAGGAGGGAAGGAGGGAAGGAG
GGAGAGGTCGCTTGACGCCCTCCCCTCCTCCTCCTCCTCCTCCTCCTTCT
TCTTTCTCTCCTCCTCCTCCTCGTCCTCCTTCTTCTCCCTCTTCGTTCAT
TCCAGAGAAGGAGCGAATGAGACGGGCGCTGGCGTTCCAATTTTGGGTGT
TGGAGGAGAAGGAGGAGGAAGGCGGGAGGAAGGGGAAAAGGACGGTGAAG
gtagggaggagagcatgaagggagggggggaaaggaggcgtcacggtctc
atttcccccgtcattttaaccccttcctcacatacgttcctcctttttaa
cacctgcagCTCTCTAGCATCGGTCCGGATTTTCCTCCTCTCTGTGGCCA
CGCCTGGGACCCCCCTCCTTCCCCTCCCCCTCCCCCTGCCCCTCCCTCCC
TCCCTCCCTCCCTTCCTCGCTCCCCGCGTCTTGTAGCCGTGGCTACGCTG
GACCACGGGATAGTGGTGTATCGGATGGAGGGAGGGGGGGAGGGAGGGAG
GGAGGGAGGGTGGAGGCTGACGCATGTGGCGTCGTTGACCTTGGCTGTAA
GATGA back to topprotein sequence of NO10G03930.1 >NO10G03930.1-protein ID=NO10G03930.1-protein|Name=NO10G03930.1|organism=Nannochloropsis oceanica|type=polypeptide|length=989bp
MDTRGKTWVCVRTKHRLLLVDVWSRECRHISAQELQKTTPTAVEGVSPSL
LLVGGSDGNMRLWDMAEWSLASTWPGGQTREVAHLQLLPSSPSTSSSSQA
SSSPSFIRFLSVGKEGGVSLWRLSYPEKAGMAPTIQTIARLEGSISLPSS
PSPSSSSSSSSSSSSPLDFVCREETLSVVDGNRIVHVWDLSPLSSSLPLP
LSSPISNPRRLSPLMFLPPSPPPSSSDPPLLFPRLRRLKIPALPKSSGGG
SCVALAAINLLSSYLYPSLAHLGISKSGVLYVFDDAASPSLLPTTKEEGG
REGGREGGREGESTFLGSPRGGREGGREGADSPSLQSITGTDDGRSEGGR
GGGRGGRSSSSSSSSSSNTPALLTIVEEVDLRPYLFPSSFMADPPPALVL
PMPGAQGERSVGGGSGGPSSSSFTTSSSFSSSSSSSSSSGGGPVGQWTVS
SLHAHPTQAHTFVLASSLGLCVIAFHRTSPLTTCFLPSLPPSLPPSLLLY
DEKRNRLLKAGIVVNEGGREGGRKEGARLTSSIPPSTSFSRQPSTSSLPP
SLPSSSVRGTLVDSILATRVLPVTSGPGVPQAPTLQASLARQNAARKKPT
LLLSPSHRCLCVFWPAVHYYTLFALPPSSPPSSPPSSPASPALSHGSSGV
SDKSGGGRGEGGREGGREGARVIESGPAVSCCFLAGKSPRGEDLFLLIAP
GADLRVGGDRDSKKRGSSLKGLFRRSQEHEAEVSSHFRVAPTLILKSISF
PSSPSSLPPCPPSSPAASPSSRPPPLSPAATAATAAAAKVALLEMEEEDK
ARLPAHMLELLTDNSCGPPGVFCLGGLIPQEGGKEGRREGGRGRLTPSPP
PPPPPPSSFSPPPPRPPSSPSSFIPEKERMRRALAFQFWVLEEKEEEGGR
KGKRTVKLSSIGPDFPPLCGHAWDPPPSPPPPPAPPSLPPSLPRSPRLVA
VATLDHGIVVYRMEGGGEGGREGGWRLTHVASLTLAVR* back to topprotein sequence of NO10G03930.2 >NO10G03930.2-protein ID=NO10G03930.2-protein|Name=NO10G03930.2|organism=Nannochloropsis oceanica|type=polypeptide|length=1173bp
MHPKAELLFTTYKSSSSWSSSSSSLPPALRVLDVHPSKNWVAFVDEAATL
FVYDYCSSSRLLRLPLPAVKDEPQRHARLYASLAPRPSSSSSFSSTSRSK
KRGGENEDEEDEEDEEDEEVWQLRRERRREGKILAVITERGRTTGGGKEG
GKLGAVEAVRFVDEDAAIIRSCCHFPLAEGPGGRMDTRGKTWVCVRTKHR
LLLVDVWSRECRHISAQELQKTTPTAVEGVSPSLLLVGGSDGNMRLWDMA
EWSLASTWPGGQTREVAHLQLLPSSPSTSSSSQASSSPSFIRFLSVGKEG
GVSLWRLSYPEKAGMAPTIQTIARLEGSISLPSSPSPSSSSSSSSSSSSP
LDFVCREETLSVVDGNRIVHVWDLSPLSSSLPLPLSSPISNPRRLSPLMF
LPPSPPPSSSDPPLLFPRLRRLKIPALPKSSGGGSCVALAAINLLSSYLY
PSLAHLGISKSGVLYVFDDAASPSLLPTTKEEGGREGGREGGREGESTFL
GSPRGGREGGREGADSPSLQSITGTDDGRSEGGRGGGRGGRSSSSSSSSS
SNTPALLTIVEEVDLRPYLFPSSFMADPPPALVLPMPGAQGERSVGGGSG
GPSSSSFTTSSSFSSSSSSSSSSGGGPVGQWTVSSLHAHPTQAHTFVLAS
SLGLCVIAFHRTSPLTTCFLPSLPPSLPPSLLLYDEKRNRLLKAGIVVNE
GGREGGRKEGARLTSSIPPSTSFSRQPSTSSLPPSLPSSSVRGTLVDSIL
ATRVLPVTSGPGVPQAPTLQASLARQNAARKKPTLLLSPSHRCLCVFWPA
VHYYTLFALPPSSPPSSPPSSPASPALSHGSSGVSDKSGGGRGEGGREGG
REGARVIESGPAVSCCFLAGKSPRGEDLFLLIAPGADLRVGGDRDSKKRG
SSLKGLFRRSQEHEAEVSSHFRVAPTLILKSISFPSSPSSLPPCPPSSPA
ASPSSRPPPLSPAATAATAAAAKVALLEMEEEDKARLPAHMLELLTDNSC
GPPGVFCLGGLIPQEGGKEGRREGGRGRLTPSPPPPPPPPSSFSPPPPRP
PSSPSSFIPEKERMRRALAFQFWVLEEKEEEGGRKGKRTVKLSSIGPDFP
PLCGHAWDPPPSPPPPPAPPSLPPSLPRSPRLVAVATLDHGIVVYRMEGG
GEGGREGGWRLTHVASLTLAVR* back to top
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