NO10G03910, NO10G03910 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO10G03910 vs. NCBI_GenBank
Match: EWM25596.1 (prenyltransferase [Nannochloropsis gaditana]) HSP 1 Score: 325.1 bits (832), Expect = 3.700e-85 Identity = 201/378 (53.17%), Postives = 243/378 (64.29%), Query Frame = 0 Query: 110 HAHHPYIELLRPHNVLPSMCLVLVGAWITARDLRRVIDPVVVMMAITSALVAVGSCVLNDYFDLKTDRINNLERSLVQGRVRPLHALLLALACLSMALFVGNSVVPTGTKINGLFF---LCRQTS----AVPMLDLASAGGKYPGAENVQLLLRLLRRIVYMAVLAVSLYTPLFKPIPFLKNGVVSLVTAASVVLGGLAALAVSTCSSIPSSLPPSLLASASVVFCHMYHREILMDIDDTERDKAGQILTLPRLFGKSLALSLGGALVALSTAVSGWIVWTQHGLRLPSL-PIFQAGG---FRGGTGGIAARLAGEMGMGVIRASAAWFAPVAVCVAGLSICVYDWRVVWMRGFRHEDVDKGIAWCPLAMVVMLLLMG 477 H HPYIE+LRP NVLPS LVL+GAWIT RDLR V+ P+V MAITSALVAVGSCVLNDYFD DRIN+ ER+LVQG++RP++ALLLAL+CL+ AL +GN + I+ F + Q S + P + A+A P + + RLLRRIV AV AV LYTP+FKP PFLKNGVV+LV AASV LGGLA A+ V CH++HREILMDIDD D AG ILTLPRL GK L+LSLGG LVA+ST VS +V QH L SL +F G FR G AA G G A W A ++CVAG+ +C+YDWRVVW GFR DV++G+ W PLAM+ +LL++G Sbjct: 111 HPWHPYIEVLRPQNVLPSAFLVLIGAWITTRDLRLVLSPLVAQMAITSALVAVGSCVLNDYFDRGVDRINHPERTLVQGQIRPIYALLLALSCLTTALLLGN--IDLSCTIHRAFASVPVAGQPSTSYLSPPPMRWATARTLTPHS-YTESTRRLLRRIVQTAVAAVVLYTPVFKPFPFLKNGVVALVIAASVALGGLAXXXXXXXXXXXXXXXXXXXAAVITVSCHIFHREILMDIDDIAGDHAGGILTLPRLLGKPLSLSLGGVLVAVSTWVSARLVVIQHALTFSSLFSLFNGPGLLAFRAAWG--AAGPHGTAG----GALGGWVALGSICVAGVVVCLYDWRVVWRGGFRGRDVERGVKWAPLAMLTVLLVLG 479
BLAST of NO10G03910 vs. NCBI_GenBank
Match: CBN80147.2 (Prenyltransferase, UbiA family, Putative 4-hydroxybenzoate octaprenyltransferase (Partial), partial [Ectocarpus siliculosus]) HSP 1 Score: 102.1 bits (253), Expect = 5.100e-18 Identity = 84/264 (31.82%), Postives = 116/264 (43.94%), Query Frame = 0 Query: 115 YIELLRPHNVLPSMCLVLVGAWITARDLRRVIDPVVVMMAITSALVAVGSCVLNDYFDLKTDRINNLERSLVQGRVRPLHALLLALACLSMALFVGNSVVPTGTKINGLFFLCRQTSAVPMLDLASAGGKYPGAENVQLLLRLLRRIVYMAVLAVSLYTPLFKPIPFLKNGVVSLVTAASVVLGGLAALAVSTCSSIPSSLPPSLLASASVVFCHMYHREILMDIDDTERDKAGQILTLPRLFGKSLALSLGGALVALSTAVSG 379 Y E+LRP+N+ S LV GA + + + +P V++ A +A V+VGSCVLND+FD++ DR+N ER LV G V P+HAL + +A L A +ASA P A L+ + +V YTPL KPIP +KN L PS+L F + HRE+LMDI D E D+ + TLP L G+ AL AL++ +G Sbjct: 18 YWEILRPNNIPASFGLVAAGALVASHTAVALFEPKVLLTAFAAAAVSVGSCVLNDWFDIELDRVNEPERPLVTGEVVPVHALGIGVAFLLAA-------------------------------VASASFVNPAA---------LQATIVASVALTLAYTPLLKPIPLVKN-----FXXXXXXXXXXXXXXXXXXXXXXXXLTPSVL-----TFFVIGHREVLMDIADVEGDREAGVRTLPVLMGRQAALVFATALLSAGVVAAG 231
BLAST of NO10G03910 vs. NCBI_GenBank
Match: XP_013897316.1 (Digeranylgeranylglyceryl phosphate synthase [Monoraphidium neglectum] >KIY98296.1 Digeranylgeranylglyceryl phosphate synthase [Monoraphidium neglectum]) HSP 1 Score: 100.5 bits (249), Expect = 1.500e-17 Identity = 86/250 (34.40%), Postives = 123/250 (49.20%), Query Frame = 0 Query: 116 IELLRPHNVLPSMCLVLVGAWI-TARDLRRVIDPVVVMMAITSALVAVGSCVLNDYFDLKTDRINNLERSLVQGRVRPLH-ALLLALACLSMALFVGNSVVPTGTKINGLFFLCRQTSAVPMLDLASAGGKYPGAENVQLLLRLLRRIVYMAVLAVSLYTPLFKPIPFLKNGVVSLVTAASVVLGGLAALAVSTCSSIPSSLPPSLLASASVVFCHMYHREILMDIDDTERDKAGQILTLPRLFGKSLAL 364 ++L R HN+LPS LV+VGAW + RDL + P V +M++ S +AV SCV NDYFD++ DR N + L G V PL ALLL+ + L + P+ LR I+ ++ A LYTP+FK + +KN V++V A + + G LAA A + + LP +L A + V+F REI+MD+ D E D+A I TLP + G+ AL Sbjct: 18 VQLARVHNLLPSFLLVMVGAWAGSGRDLAALRAPGVWLMSLLSGGIAVSSCVFNDYFDVQVDRANAPHKPLASG-VLPLDIALLLSSSVYCAVLITACFMEPS----------------------------------------QLRSIIALSAGATLLYTPVFKKLTAIKNATVAVVIALAPLGGALAAGAGE--AGVMRLLPATLFAFSGVMF-----REIVMDLTDLEGDRAAGIKTLPVMIGQRGAL 219
BLAST of NO10G03910 vs. NCBI_GenBank
Match: XP_005834669.1 (hypothetical protein GUITHDRAFT_49490, partial [Guillardia theta CCMP2712] >EKX47689.1 hypothetical protein GUITHDRAFT_49490, partial [Guillardia theta CCMP2712]) HSP 1 Score: 91.7 bits (226), Expect = 6.900e-15 Identity = 84/259 (32.43%), Postives = 122/259 (47.10%), Query Frame = 0 Query: 117 ELLRPHNVLPSMCLVLVGAWITARDLRRVIDPVVVMMAITSALVAVGSCVLNDYFDLKTDRINNLERSLVQGRVRPLHALLLALACLSMALFVGNSVVPTGTKINGLFFLCRQTSAVPMLDLASAGGKYPGAENVQLLLRLLRRIVYMAVLAVSLYTPLFKPIPFLKNGVVSLVTAASVVLGGLAALAVSTCSSIPSSLPPSLLASASVVFCHMYHREILMDIDDTERDKAGQILTLPRLFGKSLALSLGGALVALSTA 376 ++ RP N+ + L L G+ +R L + DP+V ++A+ SA V VGS ++NDYFD ++ + +G V P ALL A + M+ FF C + L LR +V +++L LYTPL K + FLKN VV+ V A ++VLGGLA V + S+L PSL +FC + +E+LMDI D D I T+P + G A AL+AL +A Sbjct: 1 KMTRPQNIPAELGLSLAGSLFASRSLACLADPLVWLVALFSASVGVGSMLINDYFDYRSGADAYKSNPMAEGTVHPEQALLAASSWYLMS----------------FFFAC-----------------------ILLESFQLRALVSVSLLLTFLYTPLLKGVLFLKNLVVAFVIAQAIVLGGLAVGDV----RMQSTLLPSL-----YMFCLILWQEVLMDIRDVRGDAEAGIRTIPVVLGCKFA-----ALLALLSA 206
BLAST of NO10G03910 vs. NCBI_GenBank
Match: XP_024520103.1 (uncharacterized protein LOC9662446 isoform X1 [Selaginella moellendorffii]) HSP 1 Score: 87.8 bits (216), Expect = 9.900e-14 Identity = 78/269 (29.00%), Postives = 122/269 (45.35%), Query Frame = 0 Query: 118 LLRPHNVLPSMCLVLVGAWITAR-DLRRVIDPVVVMMAITSALVAVGSCVLNDYFDLK--TDRINNLERSLVQGRVRPLHALLLALACLSMALFVGNSVVPTGTKINGLFFLCRQTSAVPMLDLASAGGKYPGAENVQLLLRLLRRIVYMAVLAVSLYTPLFKPIPFLKNGVVSLVTAASVVLGGLAALAVSTCSSIPSSLPPSLLASASVVFCHMYHREILMDIDDTERDKAGQILTLPRLFGKSLALSLGGALVALSTAVSGWIVWT 384 L RP +V+PS+ L L G+W+TA L + P+V A+ SA +A S + ND +D TD +N E +L G++ H + LA C+ A +G + T +N R +V + L +YTPLFK + +KN VV+ V A+S++ GGLA + +S P AS +F + REIL D+ D + D+ + T P +FG+ L + L GA + ++W+ Sbjct: 76 LTRPDDVVPSLMLSLGGSWMTANLSLEFINLPLVWTTALCSACIAGASMLANDCYDHSNGTDALNKRESALESGQLEVAH-VALASGCIYGAALLGACYLET---LNA------------------------------------RLLVATSALITFIYTPLFKKVTIVKNLVVAAVVASSILAGGLA------ITGDAASFPMRTYASTLYIFLSILGREILKDVVDVDGDRVTGVRTFPVIFGRELGIVLSGACSLGANVFLAKLLWS 298
BLAST of NO10G03910 vs. NCBI_GenBank
Match: XP_024520105.1 (uncharacterized protein LOC9662446 isoform X3 [Selaginella moellendorffii]) HSP 1 Score: 87.8 bits (216), Expect = 9.900e-14 Identity = 78/269 (29.00%), Postives = 122/269 (45.35%), Query Frame = 0 Query: 118 LLRPHNVLPSMCLVLVGAWITAR-DLRRVIDPVVVMMAITSALVAVGSCVLNDYFDLK--TDRINNLERSLVQGRVRPLHALLLALACLSMALFVGNSVVPTGTKINGLFFLCRQTSAVPMLDLASAGGKYPGAENVQLLLRLLRRIVYMAVLAVSLYTPLFKPIPFLKNGVVSLVTAASVVLGGLAALAVSTCSSIPSSLPPSLLASASVVFCHMYHREILMDIDDTERDKAGQILTLPRLFGKSLALSLGGALVALSTAVSGWIVWT 384 L RP +V+PS+ L L G+W+TA L + P+V A+ SA +A S + ND +D TD +N E +L G++ H + LA C+ A +G + T +N R +V + L +YTPLFK + +KN VV+ V A+S++ GGLA + +S P AS +F + REIL D+ D + D+ + T P +FG+ L + L GA + ++W+ Sbjct: 46 LTRPDDVVPSLMLSLGGSWMTANLSLEFINLPLVWTTALCSACIAGASMLANDCYDHSNGTDALNKRESALESGQLEVAH-VALASGCIYGAALLGACYLET---LNA------------------------------------RLLVATSALITFIYTPLFKKVTIVKNLVVAAVVASSILAGGLA------ITGDAASFPMRTYASTLYIFLSILGREILKDVVDVDGDRVTGVRTFPVIFGRELGIVLSGACSLGANVFLAKLLWS 268
BLAST of NO10G03910 vs. NCBI_GenBank
Match: XP_024520104.1 (uncharacterized protein LOC9662446 isoform X2 [Selaginella moellendorffii]) HSP 1 Score: 87.8 bits (216), Expect = 9.900e-14 Identity = 78/269 (29.00%), Postives = 122/269 (45.35%), Query Frame = 0 Query: 118 LLRPHNVLPSMCLVLVGAWITAR-DLRRVIDPVVVMMAITSALVAVGSCVLNDYFDLK--TDRINNLERSLVQGRVRPLHALLLALACLSMALFVGNSVVPTGTKINGLFFLCRQTSAVPMLDLASAGGKYPGAENVQLLLRLLRRIVYMAVLAVSLYTPLFKPIPFLKNGVVSLVTAASVVLGGLAALAVSTCSSIPSSLPPSLLASASVVFCHMYHREILMDIDDTERDKAGQILTLPRLFGKSLALSLGGALVALSTAVSGWIVWT 384 L RP +V+PS+ L L G+W+TA L + P+V A+ SA +A S + ND +D TD +N E +L G++ H + LA C+ A +G + T +N R +V + L +YTPLFK + +KN VV+ V A+S++ GGLA + +S P AS +F + REIL D+ D + D+ + T P +FG+ L + L GA + ++W+ Sbjct: 73 LTRPDDVVPSLMLSLGGSWMTANLSLEFINLPLVWTTALCSACIAGASMLANDCYDHSNGTDALNKRESALESGQLEVAH-VALASGCIYGAALLGACYLET---LNA------------------------------------RLLVATSALITFIYTPLFKKVTIVKNLVVAAVVASSILAGGLA------ITGDAASFPMRTYASTLYIFLSILGREILKDVVDVDGDRVTGVRTFPVIFGRELGIVLSGACSLGANVFLAKLLWS 295
BLAST of NO10G03910 vs. NCBI_GenBank
Match: XP_024544614.1 (chlorophyll synthase, chloroplastic-like [Selaginella moellendorffii]) HSP 1 Score: 78.2 bits (191), Expect = 7.900e-11 Identity = 74/257 (28.79%), Postives = 115/257 (44.75%), Query Frame = 0 Query: 130 LVLVGAWITAR-DLRRVIDPVVVMMAITSALVAVGSCVLNDYFDLK--TDRINNLERSLVQGRVRPLHALLLALACLSMALFVGNSVVPTGTKINGLFFLCRQTSAVPMLDLASAGGKYPGAENVQLLLRLLRRIVYMAVLAVSLYTPLFKPIPFLKNGVVSLVTAASVVLGGLAALAVSTCSSIPSSLPPSLLASASVVFCHMYHREILMDIDDTERDKAGQILTLPRLFGKSLALSLGGALVALSTAVSGWIVWT 384 L L G+W+TA L + P+V A+ SA +A S + ND +D TD +N E +L G++ H + LA C+ A +G + T +N R +V + L +YTPLFK + +KN VV+ V A+S++ GGLA + +S P AS +F + REILMD+ D + D+ + TLP +FG+ L + L GA + ++W+ Sbjct: 2 LSLGGSWMTANLSLEFINLPLVWTTALCSACIAGASMLANDCYDHSNGTDALNKRESALESGQLEVAH-VALASGCIYGAALLGACYLET---LNA------------------------------------RLLVATSALITFIYTPLFKKVTIVKNLVVAAVVASSILAGGLA------ITGDAASFPMRTYASTLYLFFSILGREILMDVKDVDGDRVTGVRTLPVMFGRKLGIVLSGACSLGANIFLAKLLWS 212
BLAST of NO10G03910 vs. NCBI_GenBank
Match: WP_015320556.1 (geranylgeranylglycerol-phosphate geranylgeranyltransferase [Natronococcus occultus] >AGB37105.1 4-hydroxybenzoate polyprenyltransferase-like prenyltransferase [Natronococcus occultus SP4]) HSP 1 Score: 76.3 bits (186), Expect = 3.000e-10 Identity = 70/263 (26.62%), Postives = 123/263 (46.77%), Query Frame = 0 Query: 116 IELLRPHNVLPSMCLVLVGAWIT-ARDLRRVIDPVVVMMAITSALVAVGSCVLNDYFDLKTDRINNLERSLVQGRVRPLHALLLALACLSMALFVGNSVVPTGTKINGLFFLCRQTSAVPMLDLASAGGKYPGAENVQLLLRLLRRIVYMAVLAVSLYTPLFKPIPFLKNGVVSLVTAASVVLGGLAALAVSTCSSIPSSLPPSLLASASVVFCHMYHREILMDIDDTERDKAGQILTLPRLFGKSLALSLGGALVALSTAVS 378 +EL RP N + + L GA++ D+ +PV+ + +T A G+ +NDYFD++TD+INN +R + +G V P AL+ S+ LFV S + +P+L A A N+ LL+ YT +FK +P + N VV+ + ++ +LGG A ++ P +L +V+ + RE++ D++D E D+ +I TLP + G+ +L+L + + ++ Sbjct: 11 VELTRPVNAIVAGVLTFTGAFVAHGSDVVGSAEPVLTAILVTVLATAAGN-TINDYFDIETDQINNPDRPIPRGAVSPRTALV-----SSIVLFVAASAL---------------ALVLPLLATAIA------LLNIALLI---------------AYTEIFKGLPGVGNAVVAYLGGSAFLLGGAAVGDIAA---------PGILFLLAVL--ATFSREVIKDVEDIEGDQREEITTLPLVIGEKHSLTLSAVFLCVMVVIT 220
BLAST of NO10G03910 vs. NCBI_GenBank
Match: WP_013880411.1 (geranylgeranylglycerol-phosphate geranylgeranyltransferase [Halopiger xanaduensis] >AEH37521.1 Digeranylgeranylglyceryl phosphate synthase [Halopiger xanaduensis SH-6]) HSP 1 Score: 75.5 bits (184), Expect = 5.100e-10 Identity = 72/263 (27.38%), Postives = 123/263 (46.77%), Query Frame = 0 Query: 116 IELLRPHNVLPSMCLVLVGAWITARDLRRVIDPVVVMMAITSALVAVGS-CVLNDYFDLKTDRINNLERSLVQGRVRPLHALLLALACLSMALFVGNSVVPTGTKINGLFFLCRQTSAVPMLDLASAGGKYPGAENVQLLLRLLRRIVYMAVLAVSLYTPLFKPIPFLKNGVVSLVTAASVVLGGLAALAVSTCSSIPSSLPPSLLASASVVFCHMYHREILMDIDDTERDKAGQILTLPRLFGKSLALSLGGALVALSTAVS 378 +ELLRP NV+ + L +GA++ PV V A+ + +AVG+ +NDYFD + DRIN ER++ +G V AL +L ++A TG + +P+L + I + ++A+ YT FK +P + N VV+ + ++ + G A AV + ++ +LLA+ + + REI+ D++D E D+A + TLP G+ A++L L+A++ S Sbjct: 11 LELLRPVNVIAASVLTFIGAFVAGGVTEA---PVAVAAAVAATGLAVGAGNAINDYFDREIDRINQPERAIPRGAVSARGALAYSLVLFALA---------TGLAV-----------TLPLLAIG---------------------IAVVNLVALVAYTEFFKGLPGVGNAVVAYLVGSTFLFG---AAAVGEYGDVEPAVVLALLAAIATL-----TREIIKDVEDIEGDRAEGLRTLPIAIGERRAIALSAILLAIAVLAS 221 The following BLAST results are available for this feature:
BLAST of NO10G03910 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO10G03910 ID=NO10G03910|Name=NO10G03910|organism=Nannochloropsis oceanica|type=gene|length=2468bpback to top protein sequence of NO10G03910.1 >NO10G03910.1-protein ID=NO10G03910.1-protein|Name=NO10G03910.1|organism=Nannochloropsis oceanica|type=polypeptide|length=482bpback to top Synonyms
Publications
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