NO10G03870, NO10G03870 (gene) Nannochloropsis oceanica

Overview
NameNO10G03870
Unique NameNO10G03870
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4254
Alignment locationchr10:1127787..1132040 +

Link to JBrowse

Properties
Property NameValue
DescriptionCellulase 2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:1127787..1132040 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0016798hydrolase activity, acting on glycosyl bonds
GO:0016787hydrolase activity
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO:0008152metabolic process
GO:0005975carbohydrate metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR017853Glycoside_hydrolase_SF
IPR001547Glyco_hydro_5
Homology
BLAST of NO10G03870 vs. NCBI_GenBank
Match: EWM26490.1 (cellulase 2 [Nannochloropsis gaditana])

HSP 1 Score: 363.6 bits (932), Expect = 9.700e-97
Identity = 169/384 (44.01%), Postives = 240/384 (62.50%), Query Frame = 0
Query:  107 RVGGVPAAYTPSRDHADQPIKWESKEGRLWANGKHFRLKGVNWFGCETDTRYPHGLWKLKMSQVLDFLTAHGFNGIRLPFSLAMALDLG-RVNDQWLEDEDLRGLTAEQLLEKFLDKCAERGVLVMLDMHRLNELAQSEMWYDKHYTECDLLQGWDRILDVAKDKWNVFALDIKNEPYGECTWGMADVSKDWKLAAEKICNHIIKNHPTFKGLFFIEG--INRPENMACDNPCPHAAWWGGSFQGLEKARVVLEGAGSEDRIVFSPHVYGPSVFMQEYFKSEDFPANMPPIWQAHWAFAKQLTGSAVVIGEWGGWRDKPPLDAEWQEALGDFLIKNEMQDQFWWCLNPDSGDTGGLVEDDWTTPVAPKLDLLARVQPSPTQVRV 488
            +  G     TP+ D     + W S+ G +  NG+ F LKGV++FG ET    PHGLW +   Q+  FL    FN +RLPFS A+AL+   +VN   +E E L  LTA +L+   +DK AE G+L+MLDMHRLNE    E+WYD  Y+  D+ + WD +L    D+WN+FA+D+KNEP+G  TWG    + DW  AAE++  ++ K HP +KGL F+EG  +   ++   D    +  WWGG  +G+++  + L       R+V+SPHVYGP  F+Q YF++++FP NMP IW+  WAF ++ T  AVV+GEWGG  +    D  WQ++   FL+   ++D F+WCLNP+SGDTGGL++ D+ TP+  KL LLA+VQP PT + V
Sbjct:   51 KASGSSKVSTPA-DLCVASLDWTSEGGEILLNGQPFHLKGVSYFGFETPNEVPHGLWSVTRDQIFGFLRNESFNAVRLPFSTALALEPNKKVNANTIEKE-LHDLTALELIGNIIDKAAEYGILIMLDMHRLNEDFIPELWYDDKYSMDDVKEAWDNLLTAFGDRWNLFAIDLKNEPHGVATWGSGKATTDWNTAAEELATYLYKKHPQYKGLVFVEGTQLASAKHHKLDK---NNKWWGGDLEGVQEFPIDLGSDALNKRLVYSPHVYGPDAFVQPYFEAKNFPDNMPDIWKKQWAFVEEQTDRAVVVGEWGGRYENQ--DKIWQDSFAKFLVDECLEDTFYWCLNPNSGDTGGLLDYDFLTPMPKKLALLAKVQPHPTFITV 427          
BLAST of NO10G03870 vs. NCBI_GenBank
Match: EWM20925.1 (cellulase 2 [Nannochloropsis gaditana])

HSP 1 Score: 345.1 bits (884), Expect = 3.600e-91
Identity = 164/369 (44.44%), Postives = 229/369 (62.06%), Query Frame = 0
Query:  125 PIKWESKEGRLWANGKHFRLKGVNWFGCETDTRYPHGLW---KLKMSQVLDFLTAHGFNGIRLPFS--LAMALDLGRVNDQWLE-DEDLRGLTAEQLLEKFLDKCAERGVLVMLDMHRLN-ELAQSEMWYDKHYTECDLLQGWDRILDVAKDKWNVFALDIKNEPYGECTWGMADVSKDWKLAAEKICNHIIKNHPTFKGLFFIEGINRPENMACDNPCPHAAWWGGSFQGLEKARVVLEGAGSEDRIVFSPHVYGPSVFMQEYFKSEDFPANMPPIWQAHWAFAKQLTGSAVVIGEWGGW-RDKPPLDAEWQEALGDFLIKNEMQDQFWWCLNPDSGDTGGLVEDDWTTPVAPKLDLLARVQPSPTQV 486
            P+ W S+   +  N + FR+KG+NWFG ET  +  HGLW      ++  LD L  HGFN IRLPFS  LA+ALD       +++ D  L  LT+ Q+++K +++  +RG++VMLD HRL+ +   S++WYD+ Y E  +L+ WD +L   K  WNVFALD+KNEP+G C+WG  +   DWK A+E+I  HI   HP F+GLFF+ GI                WWGG+F+ + +  V +   G   R+V++PHVYGP VF Q YF S  FP N+P +W  HW F   +  +AVV+ EWGG+ R K   DA+WQE +  +L +  M D F+WCLNP+SGDTGG++ DDW+T    KL LL  VQP P+++
Sbjct:   15 PLTWTSERRMVLVNNRQFRIKGINWFGFETPDKCVHGLWGGLSKTLTDYLDLLAFHGFNAIRLPFSVKLALALDTTYPEPGFVQADASLSSLTSGQIMDKLVEEAGKRGMMVMLDQHRLDPDRGISDLWYDEGYEEPVILRSWDIMLARFKTHWNVFALDLKNEPHGPCSWGSGEALTDWKAASERIIRHIAAAHPDFRGLFFVSGIWG----------GGGHWWGGNFRRVREHPVDVGSTGLNRRVVYTPHVYGPDVFPQSYFSSWSFPDNLPAVWDLHWGFLSGVLETAVVVSEWGGFCRGK---DAKWQERIARYLREKGMADNFYWCLNPNSGDTGGILLDDWSTMHEQKLKLLRDVQPEPSRL 370          
BLAST of NO10G03870 vs. NCBI_GenBank
Match: XP_004347125.1 (cellulase (glycosyl hydrolase family 5) subfamily protein [Acanthamoeba castellanii str. Neff] >ELR21743.1 cellulase (glycosyl hydrolase family 5) subfamily protein [Acanthamoeba castellanii str. Neff])

HSP 1 Score: 303.1 bits (775), Expect = 1.500e-78
Identity = 153/380 (40.26%), Postives = 218/380 (57.37%), Query Frame = 0
Query:  121 HADQPIKWESKEGRLWANGKHFRLKGVNWFGCETDTRYPHGLWKLK-MSQVLDFLTAHGFNGIRLPFSLAMAL-DLGRVNDQWLEDEDLRGLTAEQLLEKFLDKCAERGVLVMLDMHRL--NELAQSEMWYDKHYTECDLLQGWDRILDVAKDKWNVFALDIKNEPYGECTWGMADVSKDWKLAAEKICNHIIKNHPTFKGLFFIEGINRPENMACDNPCPHAAWWGGSFQGLEKARVVLEGAGSEDRIVFSPHVYGPSVFMQEYFKSEDFPANMPPIWQAHWAFAKQLTGSAVVIGEWGGWRDKPPLDAEWQEALGDFLIKNEMQDQFWWCLNPDSGDTGGLVEDDWTTPVAPKLDLLARVQPSPTQVRVDKAGKVTFS 497
            +A   + + S +G LW NG+ F+LKG +WFG ET  +  HGLW  +    +LDFL  + FN IR+PF L + L D    +  +  + DL+GL++ Q+++K +   A RG+L+M D+H    +   Q   WY+    E  ++ GW ++L   KD+WNVFA DIKNEPY   TWG  +   DW LA  +I + I  +  + + L F+EG+      A    C  A +WG +  G+    V L    +  ++V+SPH           F   +FPANMP IW  H+ F    TGSAVVIGEWGG       +  W EA+G++L+   M DQF+WCLNP+SGDTGGL+++DWTTP   KL LLA+V P+PT+   +  G+V  S
Sbjct:   40 YAPSALNFTSAQGALWLNGQPFKLKGTSWFGFETGNKVVHGLWTSRSYLNLLDFLATNNFNAIRIPFYLDLVLNDAQPSSINYGANPDLQGLSSMQVMDKVVQAAAARGLLIMFDLHSFLPDTNIQDNTWYNGANPESKVISGWTKLLQRYKDQWNVFAADIKNEPYA-ATWGTGNTGTDWNLAVARIADAIAAS-VSSRFLIFVEGV------ASSPACTDACFWGENLIGVRTHPVQLR---NPSKLVYSPHXXXXXXXXXXXFSVGNFPANMPAIWDTHFGFIPSTTGSAVVIGEWGG--HYTGSNQVWLEAMGNYLLSKRMTDQFFWCLNPNSGDTGGLLQNDWTTPEQSKLTLLAKVVPAPTKFTTNANGQVCVS 406          
BLAST of NO10G03870 vs. NCBI_GenBank
Match: XP_004337474.1 (cellulase (glycosyl hydrolase family 5) subfamily protein [Acanthamoeba castellanii str. Neff] >ELR15461.1 cellulase (glycosyl hydrolase family 5) subfamily protein [Acanthamoeba castellanii str. Neff])

HSP 1 Score: 296.6 bits (758), Expect = 1.400e-76
Identity = 152/379 (40.11%), Postives = 212/379 (55.94%), Query Frame = 0
Query:  122 ADQPIKWESKEGRLWANGKHFRLKGVNWFGCETDTRYPHGLWKLKMSQVLDFLTAHGFNGIRLPFSLAMAL-DLGRVNDQWLEDEDLRGLTAEQLLEKFLDKCAERGVLVMLDMHRL--NELAQSEMWYDKHYTECDLLQGWDRILDVAKDKWNVFALDIKNEPYGECTWGMADVSKDWKLAAEKICNHIIKNHPTFKGLFFIEG-INRPENMACDNPCPHAAWWGGSFQGLEKARVVLEGAGSEDRIVFSPHVYGPSVFMQEYFKSEDFPANMPPIWQAHWAFAKQLTGSAVVIGEWGGWRDKPPLDAEWQEALGDFLIKNEMQDQFWWCLNPDSGDTGGLVEDDWTTPVAPKLDLLARVQPSPTQVRVDKAGKVTFS 497
            A   + + S++G LW NG   R+KG +WFG ET    PHGLW    +  LDFL  +GFN IRLPF LA+A+ D    +  +  + DL+GLT+ Q+++K +   A+RG+L+MLD+H    +  A   +WY+ +  E  ++ GW ++L   +++WNVFA D+KNEPY   TWG      DW   A +I N  I +  + + L F+EG  N P        C  A ++G    G+    VV+       ++V+SPH                   NM  IW+AHW +    TG AVV+GEWGG       DA W +AL  +L   +M DQF+WCLNPDSGDTGGL+ DDW+TPV  KL LLA +  +PT   V+ AG+V  S
Sbjct:   27 ATTALNFTSEQGGLWVNGNRLRIKGASWFGFETSINAPHGLWSKSYTFFLDFLADNGFNAIRLPFHLALAINDATPGSIDYSANSDLQGLTSLQVMDKIIQAAADRGILIMLDLHSFTADSYASDGLWYNSNNPESTVISGWTKMLQRYQNQWNVFAADLKNEPY-SATWGTGS-DTDWAKGAARIAN-AIASSVSSRFLIFVEGTANSPS-------CSDACFYGEDLVGVASNPVVINNPW---KLVYSPHXXXXXXXXXXXXXXXXXXXNMAAIWEAHWGYIPASTGQAVVVGEWGG--PYSGSDATWMDALAAYLKSKDMTDQFFWCLNPDSGDTGGLLADDWSTPVTAKLSLLAGLVSAPTAFSVNSAGQVCVS 390          
BLAST of NO10G03870 vs. NCBI_GenBank
Match: EWM26893.1 (cellulase 2 [Nannochloropsis gaditana])

HSP 1 Score: 284.6 bits (727), Expect = 5.700e-73
Identity = 142/368 (38.59%), Postives = 202/368 (54.89%), Query Frame = 0
Query:  120 DHADQPIKWESKEGRLWANGKHFRLKGVNWFGCET-DTRYPHGLWKLKMSQVLDFLTAHGFNGIRLPFSLAMALDLGRVNDQWLEDEDLRGLTAEQLLEKFLDKCAERGVLVMLDMHRLNELAQSEMWYDKHYTECDLLQGWDRILDVAKDKWNVFALDIKNEPYGECTWGMADVSKDWKLAAEKICNHIIKNHPTFKGLFFIEGINRPENMACDNPCPHAAWWGGSFQGLEKARVVLEGAGSEDRIVFSPHVYGPSVFMQEYFKS-EDFPANMPPIWQAHWAFAKQLTGSAVVIGEWGGWRDKPPLDAE--WQEALGDFLIKNEMQDQFWWCLNPDSGDTGGLVEDDWTTPVAPKLDLLARVQPSPT 484
            D   + + W      L  NGK F LKG++WFG E  D+    GL    + ++L FL  + FN IR+PFS   ALD       +  D D+  L+  Q L KF+++ A+  +LVMLD HRLN+    E+WY + YT+ D+L  WD +L   K  WN+FA+D+KNEP+G  TWG  + + DW  AAEKI  H++  HP FKGL F+EG+                 +   F+ ++   +        +R+V+SPH YGPSV    +F    +FPA+    W+  W F ++ TG A V+GEWGG  D    D +  WQ+    +L++  M DQF W LNP+SGDTGG+++ +W      KL L   VQP P+
Sbjct:   61 DLGKEELTWTGTNKELRVNGKTFHLKGLSWFGLEVGDSNMLLGLNNRGLDEILQFLVDNNFNAIRVPFSTKWALDYDTGVRGYFRDGDINQLSRRQFLNKFIERAADFKILVMLDSHRLNDQEIPELWYSQEYTQEDMLAAWDILLGDLKHHWNLFAIDLKNEPHGAATWGSGNAATDWNTAAEKIGKHLLTKHPEFKGLVFVEGLG----------------YSIEFEKIKTHPIDFGKPEFNERLVYSPHQYGPSVTGDLHFAGYVNFPASQLSEWERCWGFIEEKTGHACVLGEWGGKYDSYHNDKDMVWQDRFAKYLVEKCMSDQFVWDLNPESGDTGGVLKANWWDAEEKKLALYDTVQPHPS 412          
BLAST of NO10G03870 vs. NCBI_GenBank
Match: PDM84795.1 (hypothetical protein PRIPAC_33818 [Pristionchus pacificus])

HSP 1 Score: 282.7 bits (722), Expect = 2.200e-72
Identity = 137/352 (38.92%), Postives = 203/352 (57.67%), Query Frame = 0
Query:  142 FRLKGVNWFGCETDTRYPHGLWKLKMSQVLDFLTAHGFNGIRLPFSLAMAL-DLGRVNDQWLEDEDLRGLTAEQLLEKFLDKCAERGVLVMLDMHRLNELAQ-SEMWYDKHYTECDLLQGWDRILDVAKDK-------WNVFALDIKNEPYGECTWGMADVSKDWKLAAEKICNHIIKNHPTFKGLFFIEGINRPENMACDNPCPHAAWWGGSFQGLEKARVVLEGAGSEDRIVFSPHVYGPSVFMQEYFKSEDFPANMPPIWQAHWAFAKQLTGSAVVIGEWGGWRDKPPLDAEWQEALGDFLIKNEMQDQFWWCLNPDSGDTGGLVEDDWTTPVAPKLDLLARVQPSPTQ 485
            F LKG+N+FG E++T  PHG+W   ++  LDF+  + FN IR+PFSL M   +   +N     +  L G TA QLL+ F+D+ AERG+L+MLD HR+      SE+WY+  Y E  ++  W  ++    D+       WNVFA+D+KNEP+   +WG ++ + DW  AAE+I N +     +F GLFF+EGI                 WG   + + +  +    A   +R+++SPH YGPSV+ +  F ++DFP N+  I+ A + F    TG  VV+GEWGG  +    D  W +   ++L    + + F+WCLNP+S DTGGL+EDDW TP   K++L  R QP+PT+
Sbjct:   23 FVLKGINYFGFESETYTPHGIWSYDLNFYLDFIKNNNFNAIRVPFSLEMVKNNPSNLNINCGSNPGLCGKTALQLLDAFIDRAAERGLLIMLDNHRITPGGGISELWYNNEYPESQVISLWQSLITRYSDRQVQLKWIWNVFAIDLKNEPHDSASWGNSNAATDWNKAAERIINSL----SSFPGLFFVEGIE----------------WGNRLENVAQFPINTGNASLNNRVIYSPHCYGPSVYDRPEFNTQDFPNNLDGIYMAKYGFIVNQTGHPVVVGEWGGRAEVGSRDMAWNQWYVEWLRSKCITNNFYWCLNPNSADTGGLLEDDWLTPTPRKINLTNRAQPNPTK 354          
BLAST of NO10G03870 vs. NCBI_GenBank
Match: XP_012751935.1 (hypothetical protein SAMD00019534_080210 [Acytostelium subglobosum LB1] >GAM24846.1 hypothetical protein SAMD00019534_080210 [Acytostelium subglobosum LB1])

HSP 1 Score: 281.6 bits (719), Expect = 4.800e-72
Identity = 148/387 (38.24%), Postives = 208/387 (53.75%), Query Frame = 0
Query:  112 PAAYTPSRDHADQPIKWESKEGRLWANGKHFRLKGVNWFGCETDTRYPHGLWKLKMSQVLDFLTAHGFNGIRLPFSLAMALD---LGRVNDQWLEDEDLRGLTAEQLLEKFLDKCAERGVLVMLDMHRL--NELAQSEMWYDKHYTECDLLQGWDRILDVAKDKWNVFALDIKNEPYGECTWGMADVSKDWKLAAEKICNHIIKNHPTFKGLFFIEGINRPENMACDNPCPHAAWWGGSFQG----LEKARVVLEGAGSEDRIVFSPHVYGPSVFMQEYFKSEDFPANMPPIWQAHWAFAKQLTGSAVVIGEWGGWRDKPPLDAEWQEALGDFLIKNEMQDQFWWCLNPDSGDTGGLVEDDWTTPVAPKLDLLARVQPSPTQVRVDK 490
            P       +H  + + + SK+G LW N  +F+LKG+NWFGCET+T   HGLW     Q LDFL A+ FN IR+PF L M L       ++     + DL GL A  +L+  ++   ERG+ ++LD+H    N+     +WY+  +TE + L+ W+ ++      WNV  +D+KNEPY   TW   +   DW  A  +I + I  N    + L F +G+  P   +   PC     WG SF+      +   +       ED+ V+SPH YGPSV    +F+   FP NM P W A++    Q T  AVVIGEWGG +    LD  W  +   +L      D F+WCLNP+SGDTGGL++DDW +    KLDLL ++ P PT+VR DK
Sbjct:  163 PLIKVKMNNHHYREVNFTSKDGCLWINDVNFKLKGINWFGCETETSVVHGLWSRDYKQYLDFLQANHFNAIRIPFCLEMILKDPIPTSISITTHMNSDLHGLRALSVLDIIIEAAGERGIFILLDLHSFGPNDRLHDGLWYNSAHTEQETLKAWNILILRYGRTWNVMGVDLKNEPY-SATWDSGNPLTDWDKAINRIGSFIQTNGGN-RWLIFGQGV--PSQQSSSLPC----CWGESFESEGRQSDTKPLTTIHLPIEDKFVYSPHCYGPSVVNHNHFRHSSFPDNMMPHWDANFGMLPQTTRRAVVIGEWGG-KYAENLDRLWMTSFVKYLQNRGCTDSFYWCLNPNSGDTGGLLKDDWVSINQDKLDLLHKLCPHPTKVRYDK 540          
BLAST of NO10G03870 vs. NCBI_GenBank
Match: XP_004334214.1 (glycoside hydrolase family protein [Acanthamoeba castellanii str. Neff] >ELR12201.1 glycoside hydrolase family protein [Acanthamoeba castellanii str. Neff])

HSP 1 Score: 280.0 bits (715), Expect = 1.400e-71
Identity = 146/386 (37.82%), Postives = 210/386 (54.40%), Query Frame = 0
Query:  113 AAYTPSRDHADQPIKWESKEGRLWANGKHFRLKGVNWFGCETDTRYPHGLWKLKMSQVLDFLTAHGFNGIRLPFSLAMALD---LGRVNDQWLEDEDLRGLTAEQLLEKFLDKCAERGVLVMLDMHRL--NELAQSEMWYDKHYTECDLLQGWDRILDVAKDKWNVFALDIKNEPYGECTWGMADVSKDWKLAAEKICNHIIKNHPTFKGLFFIEGINRPENMACDNPCPHAAWWGGSFQGLEKARVVLEGAGSEDRIVFSPHVYGPSVFMQEYFKSEDFPANMPPIWQAHWAFAKQLTGSAVVIGEWGGWRDKPPLDAEWQEALGDFLIKNEMQDQFWWCLNPDSGDTGGLVEDDWTTPVAPKLDLLARVQPSPTQVRVDKAGKV 494
            AA   S  +A   + + S+ G+LW NG+ F+LKGV+WFG ET     HGLW    +  LDFL A GFN IRLPF L + L+      +N     + DL+GL + Q+++K +   A RG+L+M D+H    ++     MWY+    E  ++ GW ++L   K++WNV A D+KNEP+   TWG  + + DW L A ++ N  I +  + + L F+EG+      A   PC    +WG +  G     VV+    +  ++V+SPH                   NMP IW+ HW F    TG A VIGEWGG       D  W +AL  +L   +  DQF+WCLNP+SGDTGGL+++DW +P   KL LLA +  +PT+  V+  G+V
Sbjct:   27 AAGQSSSCYAPTALNFTSEAGKLWVNGQRFKLKGVSWFGFETAACTVHGLWANSYTFFLDFLAAQGFNTIRLPFHLELVLNDKSPNGINYGAGSNADLQGLNSLQVMDKIVQAAAARGLLIMFDLHSFAPDQFMADGMWYNAANPESKVISGWTKLLQRYKNQWNVIAADLKNEPH-TSTWGTGNSATDWNLGAARLAN-AIASGVSDRFLMFVEGV------ANSPPCRENCFWGENLTGARTNPVVI---ANPAKLVYSPHXXXXXXXXXXXXXXXXXXXNMPAIWEDHWGFIPAATGRAFVIGEWGG--PFSGKDQVWMDALVAYLKSKDSTDQFFWCLNPNSGDTGGLLQNDWASPETGKLALLANLVSAPTKFSVNAQGQV 399          
BLAST of NO10G03870 vs. NCBI_GenBank
Match: ADV58290.1 (cellulase 1, partial [Pristionchus pacificus] >ADV58294.1 cellulase 1, partial [Pristionchus pacificus] >ADV58307.1 cellulase 1, partial [Pristionchus pacificus])

HSP 1 Score: 278.1 bits (710), Expect = 5.300e-71
Identity = 140/368 (38.04%), Postives = 216/368 (58.70%), Query Frame = 0
Query:  127 KWESKEGRLWANGKHFRLKGVNWFGCETDTRYPHGLWKLKMSQVLDFLTAHGFNGIRLPFSLAMALDLGRV-NDQWLEDEDLRGLTAEQLLEKFLDKCAERGVLVMLDMHRLNE--LAQSEMWYDKH--YTECDLLQGWDRILDVAKDKWNVFALDIKNEPYGECTWGMADVSKDWKLAAEKICNHIIKNHPTFKGLFFIEGINRPENMACDNPCPHAAWWGGSFQGLEKARVVLEGAGSEDRIVFSPHVYGPSVFMQEYFKSE---DFPANMPPIWQAHWAFAKQLTGSAVVIGEWGGWRDKPPLDAEWQEALGDFLIKNEMQDQFWWCLNPDSGDTGGLVEDDWTTPVAPKLDLLARVQPSPTQVR 487
            KW + +GR+  NG+   LKGVN+FG ET+T  PHG+W   ++ +LDF+  + FN IR+PFS+ M  D   + N     + +L G +A ++L+ F+D+ AERG+L++LD HR          +WY+    Y E ++++ W  ++   K++WNVFA+D+KNEP+   TWG ++ + DW  AAE++ N + +    F GLFF+ GI                 WGG F+  ++  +    A   +R+V+SPH YGP V+ +  F  E   ++  N+  I+ A +AF  +  G  VVIGEWGG       DA+W +   D++    M + F+W LNP+SG TGGL++DDW TP+  KLDL+ R QP+PT+ +
Sbjct:    1 KWTTDDGRIMVNGQPLVLKGVNYFGFETETYAPHGIWDHNLNDMLDFIKDNNFNAIRVPFSMEMVRDNPVIMNVHCHNNPNLCGTSALRMLDIFIDRAAERGLLIVLDNHRTQSGGYISPPLWYNNSAGYPEDEVIRLWKHLVMRYKNQWNVFAIDLKNEPHDAATWGRSNRNTDWNQAAERMINALHE----FPGLFFVGGIE----------------WGGRFENADQYPIETGHAHLNERVVYSPHCYGPDVYDRSEFHVENMHEYAKNLDRIYTAKYAFLAE-KGYPVVIGEWGGKAKPGTRDAKWNKWFVDWIRDKCMTNNFYWALNPNSGHTGGLLDDDWKTPIQHKLDLVNRAQPNPTKFK 347          
BLAST of NO10G03870 vs. NCBI_GenBank
Match: WP_078642203.1 (1,4-beta-glucanase [Streptomyces hygroscopicus] >AQW51743.1 endo-1,4-beta-glucanase [Streptomyces hygroscopicus])

HSP 1 Score: 276.9 bits (707), Expect = 1.200e-70
Identity = 140/361 (38.78%), Postives = 211/361 (58.45%), Query Frame = 0
Query:  122 ADQPIKWESKEGRLWANGKHFRLKGVNWFGCETDTRYPHGLWKLKMSQVLDFLTAHGFNGIRLPFSLAMALDLGRVND-QWLEDEDLRGLTAEQLLEKFLDKCAERGVLVMLDMHRLNELAQSEMWYDKHYTECDLLQGWDRILDVAKDKWNVFALDIKNEPYGECTWGMADVSKDWKLAAEKICNHIIKNHPTFKGLFFIEGINRPENMACDNPCPHAAWWGGSFQGLEKARVVLEGAGSEDRIVFSPHVYGPSVFMQEYFKSEDFPANMPPIWQAHWAFAKQLTGSAVVIGEWGGWRDK-PPLDAEWQEALGDFLIKNEMQDQFW-WCLNPDSGDTGGLVEDDWTTPVAPKLDLLARVQ 480
            AD P+  +  E  + ANGK   L GVNWFG ET T  PHGLW      +LD +   GFN +RLP++  M     + N   W ++ DL+GLT +Q+++K +    +RG+ V+LD HR ++  QSE+WY +  +E   +  W ++    K+   V   D+ NEP G+ TWG  +   DW+LAA K  N I K +  +  L F+EG +R +N           WWGG  QG++K  V L+     +++V+S H YGP V+ Q +F ++DFP NMP IW+ HWA+ K+   + +++GE+GG +      +A WQ AL D+L K+++   +W W  NPDSGDTGG++++DW T    K+ +LA+ Q
Sbjct:   70 ADGPLSTKKSE-IVDANGKKVVLTGVNWFGFETGTYAPHGLWTRNWESMLDQMAKQGFNTMRLPYANEMFKSSAKPNGIDWHKNPDLKGLTPQQIMDKIVKGATDRGIRVILDQHRPDQYGQSELWYSQSLSEKQWMDDWVKLAKRYKNNDRVIGADLHNEPRGQATWGDGNPKTDWQLAATKAGNAIHKVNKNW--LIFVEGTDRHKN--------EQFWWGGDLQGVKKHPVKLK---EPNKVVYSAHDYGPGVYNQNWFMAKDFPKNMPAIWEKHWAYIKKQNIAPLLLGEFGGKKTAGKSSEAVWQNALMDYLKKHQISYTYWTW--NPDSGDTGGVLKNDWKTIDQNKMKMLAKYQ 414          
The following BLAST results are available for this feature:
BLAST of NO10G03870 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26490.19.700e-9744.01cellulase 2 [Nannochloropsis gaditana][more]
EWM20925.13.600e-9144.44cellulase 2 [Nannochloropsis gaditana][more]
XP_004347125.11.500e-7840.26cellulase (glycosyl hydrolase family 5) subfamily ... [more]
XP_004337474.11.400e-7640.11cellulase (glycosyl hydrolase family 5) subfamily ... [more]
EWM26893.15.700e-7338.59cellulase 2 [Nannochloropsis gaditana][more]
PDM84795.12.200e-7238.92hypothetical protein PRIPAC_33818 [Pristionchus pa... [more]
XP_012751935.14.800e-7238.24hypothetical protein SAMD00019534_080210 [Acytoste... [more]
XP_004334214.11.400e-7137.82glycoside hydrolase family protein [Acanthamoeba c... [more]
ADV58290.15.300e-7138.04cellulase 1, partial [Pristionchus pacificus] >ADV... [more]
WP_078642203.11.200e-7038.781,4-beta-glucanase [Streptomyces hygroscopicus] >A... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL052nonsL052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR004ncniR004Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR016ngnoR016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO10G03870.1NO10G03870.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|670081gene_3821Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO10G03870.1NO10G03870.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO10G03870 ID=NO10G03870|Name=NO10G03870|organism=Nannochloropsis oceanica|type=gene|length=4254bp
ACAGCTGCCACTGAAAGTCGCTATGAAGCCAATAAGTATTCTCTCTGCTT
CCTGGGGCGACCATGATAGCACCGCgtaagtaatccaccctgcaatggaa
tctaatgtccgacctgccgtctcccttgccaaaggcccttcactcccccc
cgcacgcccccattatccctccttcggaatcagtaccacatcccctcgat
tcctcgctatttattgtgccaagcacgggtttactgtccgactctccctc
cgctcctcccgcccaccctccctccctctttacctgtcccgaccgcttta
tccctcctcaaaccgtctttcacatcctctgcccacttccctatacccac
cacgactcagTTTTGTGGATGTCACTGCACAAGTCACTGCCATGCTCCCC
ACCCCTCCCCTCACCCTGACTGTCCCCGCCACCACTGCCGCCTTGGGCGT
CGCCGACCCCGCACCTGGGCGCGTCAAGACCCTTAAAGTGCGTTATGGCT
CAGGCGCCGCCGGAGCCGTTATGGAAAAATGCGCTGAAGAAGGCAGTTCA
TTGACAATCGGCGTCGTCGCTCCTTCTTCTCCTCCTCCTCCTTCTCCCTC
AGCTCCTGTTGTCCCTCCCAAGCCGCGCGTGGGAGGTGTGCCTGCCGCCT
ACACGCCATCGAGGGACCACGCGGATCAGCCCATTAAGTGGGAGTCGAAA
GAAGGGAGACTATGGGCGAACGGGAAGCATTTTCGATTGAAAGgtagggt
atataggtgccttaaattgagtgcgtatcctagggaggagggcagggcca
aacctgtgtattcgatcggtggtgtattccccattgccatgtccccaccc
tcacacagGCGTTAACTGGTTCGGGTGCGAAACGGACACCCGTTATCCGC
ACGGCCTCTGGAAGCTCAAGgtgagaaagggagggagggaggcggaggaa
gaatgctgagtcgggacaagaacaacagccagcagcaagagaccaaccca
ccctccgtccgtttgtccgtccgtccgtccctccctccctccctctcccc
ctccctccttgtccacagATGTCCCAAGTGCTCGACTTTTTGACCGCCCA
CGGTTTTAATGGTATCCGTCTACCGTTCTCCCTGGCCATGGCCCTGGACC
TGGGCAGGGTAAATGACCAGTGGCTGGAAGACGAGGACTTGAGGGGCTTG
ACCGCCGAGCAGCTGCTGGAGAAgtagggagggagggagggagggaggga
gggaggaagggaggatggatgaagtgcttaatttctggacttgcgcatag
aactcaccctacgttccctcctccctccatccctccctccctcccttcct
ccctcccaccttcccttcccagGTTCCTGGACAAGTGTGCCGAGCGGGGG
GTGTTGGTAATGCTGGACATGCACCGCCTCAACGAGCTGGCGCAGAGCGA
GATGTGGTACGACAAACACTACACGGAGTGTGACCTCCTGCAGGGGTGGG
ACCGGATCCTGGACGTGGCCAAGGACAAGgtgagagggagggagggagga
aggggagtgggtgagatgcggtacgacaaacactacaaggaccccccctc
cctccctgcttcgctcgctccctccctccagtctcactgcgcagccatat
tcttctctttccccccttctcttccttccagtcgtaatcccctctccttc
tgcctccgttgcctcgtcttttaaccccaccctctcgtcattgattcctg
ttctcaaactccctccctccttccctccctccctccctccctccctcctt
cgaagTGGAATGTGTTCGCCCTTGACATTAAAAACGAGCCGTACGGAGAG
TGCACGTGGGGCATGGCCGACGTGTCCAAGGACTGGAAGCTGGCTGCGGA
GAAGATATGCAACCACATCATgtgaggaggaggggaggagggagggaggt
gcgggcgaatttatcatttttctgcgttcattcattcctggattcttcca
tttcttcctttcttcctttctgtcctttctttccttccttgttcccgcct
ttattcttcgtagAAAAAATCACCCAACTTTCAAAGGCCTCTTCTTCATC
GAAGGCATCAACAGGgtaagccctcctccctccctccctccctccctccc
tccctccctccctcccgcccgcccgcccgcccgcccaagagcagcctacc
ctaggatttgtccttcttttctttccccttctccttatgccagaactgcc
agagagaagccactcatacgcctccctccctccctccctcccctccctcc
ctccctccctccctccctccctccctccctccctccctccctccctccct
ccctccctccctccctccctctctccctccctccctccctctctccctcc
ctctctccctccctccctacctccctccctccctccctccctccctccct
ccctccctccctccctccctccctccctccctccctccctccctccctcc
ctccctccctctctccctctctccctccctccctccctccctccctccct
ccctccctctctccctctctccctctctccctccctctctccctccctcc
ctccctccctccctccctccctccctccagCCCGAGAACATGGCGTGTGA
CAATCCCTGTCCACACGCCGCCTGGTGGGGAGGAAGTTTCCAGGGCCTGG
AGAAGGCACGGGTGGTGCTGGAGGGGGCGGGCTCAGAAGATCGGATCGTG
TTTTCCCCCCACGTGTACGGACCCAGgtaggtagggaggtagggagggag
ggaggtagggagggagggagggagggaggtagggagggagggagggaggg
agggagagagggagggagagagggagggaggggaacaaggacagggagaa
tcgaagtccagggacgcacgtcgggaaatcttaccctccctctctccttc
cctccctccctccccccctctctccctcccgccctctgttcagTGTCTTT
ATGCAGGAGTACTTTAAGTCCGAGGATTTCCCTGCCAATATGCCCCCCAT
ATGGCAGGCCCACTGGGCCTTTGCCAAGCAGCTGACGGGCTCGGCCGTGG
TTATTGGGGAGTGGGGGGGCTGgtgagaaggagggaagagggggagggag
ggagggaggggggatgcggtagtctcaagatttgcgtggggcggcagata
tcttccttctgtctgcttaagtaaccctctccctccctccctccctccct
ccctccctccctccctcccttcctccctccctgcagGCGGGACAAGCCTC
CCCTGGACGCAGAGTGGCAAGAGGCTCTCGGCGACTTCCTCATAAAGAAC
GAGATGCAGGACCAATTCTGGTGGTGCCTGAATCCGGACAGgtagggagg
gagggagggagggagggagggagggttgcccgtatgtgtatgtccaagtc
gtccgctagaccgtccctccctccctccctccttccctccctccttccct
ctctccctccctccctcctgcagCGGCGATACGGGAGGGCTGGTGGAGGA
TGATTGGACTACACCCGTAGCCCCCAAACTGGACTTACTCGCCCGTGTGC
AGCCGTCCCCTACTCAAGTGAGGGTGGATAAGGCAGGCAAGGTGACATTT
TCCTGAGGAGGGAGGGGGGGAGGGGGGGAGAGAGGGATGAATTGTGGTAA
TACTATATTTAGAAAAAATTTAGATGGCAAAGCACGAGAAAGAGCGAGTG
TGTGATCTGTGGAGCGGAAGAGGGACGAGGGAGGGAGAGAGAGGAAGAGG
GAGTAGGAGAGGGCGAGAGTGAAAGAATGTGCTATGTGGAGCGGAAGAAG
GAAGAGACCAAGGAAGAAGAGGCAGTAGACAGGAAATTGCAAGCATTTGC
GTATGTGTATTCAGCTGTGTGTGTTGTGGTAATGATGATTCGGACTGGAA
AAAGGGAGAAGGAGAGAAAGAGGAAGACTCAAAGAGATGGAGAGAGGGCG
GGAGGGTGAAAACAAAACCGAGGGCTTTTTGACCGTTGGAATGAAGGGAG
AAGAAATGGCATAGCTAGAGCAGCCGCAGCGACAGGAGCAGCAGCAGATG
ATGGCCTGGTTTCCCTCTTTTTTAGCTTTCACTTCGTTTGTGTCTTCTTG
TCATGCACACCTCCCCTCCCTACCTCCCTCCCTTGTTCCCTCCCTCCTCC
CTCCCCCTTCCATCTACGCTTGCATTTTGTCTATAACGAGGCCCAGCCCT
CCCT
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protein sequence of NO10G03870.1

>NO10G03870.1-protein ID=NO10G03870.1-protein|Name=NO10G03870.1|organism=Nannochloropsis oceanica|type=polypeptide|length=497bp
MKPISILSASWGDHDSTAFVDVTAQVTAMLPTPPLTLTVPATTAALGVAD
PAPGRVKTLKVRYGSGAAGAVMEKCAEEGSSLTIGVVAPSSPPPPSPSAP
VVPPKPRVGGVPAAYTPSRDHADQPIKWESKEGRLWANGKHFRLKGVNWF
GCETDTRYPHGLWKLKMSQVLDFLTAHGFNGIRLPFSLAMALDLGRVNDQ
WLEDEDLRGLTAEQLLEKFLDKCAERGVLVMLDMHRLNELAQSEMWYDKH
YTECDLLQGWDRILDVAKDKWNVFALDIKNEPYGECTWGMADVSKDWKLA
AEKICNHIIKNHPTFKGLFFIEGINRPENMACDNPCPHAAWWGGSFQGLE
KARVVLEGAGSEDRIVFSPHVYGPSVFMQEYFKSEDFPANMPPIWQAHWA
FAKQLTGSAVVIGEWGGWRDKPPLDAEWQEALGDFLIKNEMQDQFWWCLN
PDSGDTGGLVEDDWTTPVAPKLDLLARVQPSPTQVRVDKAGKVTFS*
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Synonyms
Publications