NO10G03860, NO10G03860 (gene) Nannochloropsis oceanica

Overview
NameNO10G03860
Unique NameNO10G03860
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1326
Alignment locationchr10:1126325..1127650 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:1126325..1127650 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO10G03860 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL052nonsL052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR004ncniR004Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR016ngnoR016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO10G03860.1NO10G03860.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO10G03860.1NO10G03860.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO10G03860 ID=NO10G03860|Name=NO10G03860|organism=Nannochloropsis oceanica|type=gene|length=1326bp
TCCTCTCTCACCCTTTCTTTTCCTTTCTTTTCACACAAACCCCACAGCCT
ACAGCACCATGCCCGGCGGAAGCATGAGGATGCAACATCGTTTGCTTCCT
AAACTTACCAAGAAAGCGGCCCGGGTGTTCGATGTGGTGCACGATGAGAC
CTTCACCTTCCCTCGAGGGTACCGAAAGAAGgtagggcttttggcggcat
tccaggacactgtggggggaagaagaataccggcacccacccttcactac
actctaccgttcatgcactgtatatatcatcacagATGTTCTCAAAAGGA
AGTGGAGGAGGAAGAAGAGGAGGAGGAGGAGAAGGAGGTGGTGACGGTAC
AGGCAATGGAGGAGGGCGAGGACGCGGCAGACCGGATACACAAGATGACA
ATAATAGTAATGACAGCGAGGAGGAGGAGGATGAGGAGGATGAGGTAGAG
AACAAAGATGATGATGAGGAATGGCTCGGCAGCAAGGAGGGGGAGGAGGG
GGAGGAGAAGGGAGACAAGGGAAGTTTTCTCGACCCCGATTCGCATCCCC
CGCCTAAATCCCCTCCTTCATCGCACTTTACCTGCCCTGGCCCGCAACCA
CCACCACCAGCAGCAGCAGCAGCAGCAGCACCAGTTAAAGCAGCAATAGA
AGCAGCAGTAGAAGCAGCAGTAGAAGCAGCAGTAGAAGCAGCAGCACCAG
TAAAAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGCTCGTCATTA
CATAAACGCTCTTCCTCCTGCTCCTCCTCCTCCTCCTCCCCCTTCCTCTC
CCTCATCCCCCCCCTCCCACTCACCCTCAGGGGCTGGGCCCTCACGGCGT
TTGACGGCGAGTTAATACGTACTACCAGGATGCTGGAGGGGCGGAAGAAG
GGATGGGTGGGGGAAGGGAGTGAGGACATGCCCCGGACTGTTTGGGGATG
GCTGCGGGTGTTGCAGCAGCCGGCAAGAGGGCAAGCATCGCGATATCGGG
AGGAGGAGGAGAAGGAGGAGGAGGAGGAGGAGGCGAATGACAAGTGCTAT
GGCACTGGTGGAGAGGAAAAGATGGAGGAAGGAAAGGAGGAAGAGGGCAG
GAAGCAACGACAAGGACAGGGAACGCGGGGAATGACAGTGAGGGGGAGGA
GGGGTTGGAAGGAGGGGGGCAGGTCGCCTTTGAGTGGTGTGAGCAGTGGG
AGCAGTCGTCGACTGTTTTGGATGGCAGCAGAGGAGGAGGGGGAGGGGGG
GGGAGGAGGAGGGGGAGGAGGGGGGAAGGAAGAACAGGAGGACGAAGAGA
AGGAGGAAGGGATGGGTAGTTGGTGA
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protein sequence of NO10G03860.1

>NO10G03860.1-protein ID=NO10G03860.1-protein|Name=NO10G03860.1|organism=Nannochloropsis oceanica|type=polypeptide|length=388bp
MPGGSMRMQHRLLPKLTKKAARVFDVVHDETFTFPRGYRKKMFSKGSGGG
RRGGGGEGGGDGTGNGGGRGRGRPDTQDDNNSNDSEEEEDEEDEVENKDD
DEEWLGSKEGEEGEEKGDKGSFLDPDSHPPPKSPPSSHFTCPGPQPPPPA
AAAAAAPVKAAIEAAVEAAVEAAVEAAAPVKAAAAAAAAAAAGSSLHKRS
SSCSSSSSSPFLSLIPPLPLTLRGWALTAFDGELIRTTRMLEGRKKGWVG
EGSEDMPRTVWGWLRVLQQPARGQASRYREEEEKEEEEEEANDKCYGTGG
EEKMEEGKEEEGRKQRQGQGTRGMTVRGRRGWKEGGRSPLSGVSSGSSRR
LFWMAAEEEGEGGGGGGGGGGKEEQEDEEKEEGMGSW*
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Synonyms
Publications