NO10G03820, NO10G03820 (gene) Nannochloropsis oceanica

Overview
NameNO10G03820
Unique NameNO10G03820
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length5195
Alignment locationchr10:1108604..1113798 -

Link to JBrowse

Properties
Property NameValue
DescriptionCa2: cation antiporter family
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:1108604..1113798 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
GO:0055085transmembrane transport
Vocabulary: INTERPRO
TermDefinition
IPR004837NaCa_Exmemb
Homology
BLAST of NO10G03820 vs. NCBI_GenBank
Match: EWM25576.1 (ca2 :cation antiporter family, partial [Nannochloropsis gaditana])

HSP 1 Score: 414.5 bits (1064), Expect = 6.600e-112
Identity = 259/412 (62.86%), Postives = 282/412 (68.45%), Query Frame = 0
Query:  281 EMVIGVQALAQGEIRVVQASMLGSILSNLLLVTGSCFLVGGILHKEQRFNPVASVANLSLLFLASLALVIPTPIGHSYKLSQAHILLISRVAAFCLLSMYLQLIVFQLVTHKHLFDGHGEEVEXXXXXXXXXXXXXXXXXXXEGGKRRAEEEKEATELEEGKRLSSNGVANSVVNGASHPP----------HAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGLWGSMAGLLIVAVIVCIFSDLVVSSIDGMSAEYGVSKTFVGVILLPLVGNATEHMTAVTVAVKNRMELAMGIAVGSSTQIALFVIPVLTLAGWALGQNMTLEFPPIEIITLIMSIIVVQPVLLNAQSNWLLGSLLITAYCFCGFAFFFEKPPLPGQ 683
            EMVIGVQAL+ GEIRVVQAS+LGSILSNLLL+TGSCFLVGGI+HKEQRFN +A VANLSLLFLA LALVIPTPIGH+YKLS+AHILLISRVAAF LLSMYLQLIVFQLVTHKHLF+G  +              XXXXXXX EGG  +         ++ G RLS   +    +                 +                                                              LGLWGSMAGLL+VA+IV  FS+LVV+SIDGMS  YG+SKTFVGVILLPLVGNATEHMTAVTVA KNRMELAMGIAVGSSTQIAL VIP LTLAGWALGQ+MTLEFPPIEII LIMS+IVVQPVLLNAQSNWLLGSLLITAY FCGFAFFFEKPPLPG+
Sbjct:    3 EMVIGVQALSHGEIRVVQASLLGSILSNLLLITGSCFLVGGIIHKEQRFNSMAGVANLSLLFLACLALVIPTPIGHTYKLSKAHILLISRVAAFFLLSMYLQLIVFQLVTHKHLFEGEHQ-----------GGGXXXXXXXVEGGNGKVR------VIQAGYRLSIQLILPPSLXXXXXXXXXXXXTVLTLNVEPAFPPSLSGLPAEPFHCPHHTHYVCDAVGLSHSQHTHSGSCDAAAGTLEEVDDGDEDHVDLGLWGSMAGLLVVALIVSFFSNLVVTSIDGMSDAYGMSKTFVGVILLPLVGNATEHMTAVTVAAKNRMELAMGIAVGSSTQIALLVIPSLTLAGWALGQDMTLEFPPIEIIALIMSLIVVQPVLLNAQSNWLLGSLLITAYGFCGFAFFFEKPPLPGE 397          
BLAST of NO10G03820 vs. NCBI_GenBank
Match: XP_002178946.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC49644.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 318.2 bits (814), Expect = 6.400e-83
Identity = 190/461 (41.21%), Postives = 252/461 (54.66%), Query Frame = 0
Query:  215 LNVLMLFLPLGLLSNVFQWGAGPTFIFNFLGLIPLAAILGDFTEEVAEHLGDTIGGLVNASFGNLMEMVIGVQALAQGEIRVVQASMLGSILSNLLLVTGSCFLVGGILHKEQRFNPVASVANLSLLFLASLALVIPTPIGHSYKLSQAHILLISRVAAFCLLSMYLQLIVFQLVTHKHLFDGHGEEVEXXXXXXXXXXXXXXXXXXXEGGKRRAEEEKEATELEEGKRLSSNGVANSVVNGASHPPHAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGLWGSMAGLLIVAVIVCIFSDLVVSSIDGMSAEYGVSKTFVGVILLPLVGNATEHMTAVTVAVKNRMELAMGIAVGSSTQIALFVIPVLTLAGWALGQNMTLEFPPIEIITLIMSIIVVQPVLLNAQSNWLLGSLLITAYCFCGFAFFFE 676
            +++ +L +PLG  S+   WG+   F  NF  +IPLA+ILGDFTEEVA H   TIGGL+NA+FGN +E+V+ +QAL   EIRVVQASM+GSI SNLLLV G CF  GG+ H++QRFN VA+ AN+ LL L+S+AL++PTP    Y+L  AH+L +SR+AA  L+ MYLQL+ FQL TH +LF G  ++ E                                                                                                                         +  W S+ GLL   +++ IFSD +V SIDG   + G+S+TFVG+ILLP+VGNA EH+TAVTVA+K++M+LAMG+AVGS TQI+LFV+P+  L GWAL ++MTL FPP E+I  +MS++ V  VL N + NWL GSLLIT Y      F+FE
Sbjct:    1 VSLCLLAMPLGWYSHYASWGSTWIFWLNFFTMIPLASILGDFTEEVALHTNQTIGGLINATFGNAVEVVVAIQALLANEIRVVQASMIGSIFSNLLLVLGCCFFFGGLGHQQQRFNSVAATANMGLLALSSIALILPTPFAAYYELHDAHVLTVSRIAACFLMCMYLQLLFFQLKTHANLFAGTQDDSE----------------------------------------------------------------------------------------------------------------------LAVMPFWVSIVGLLFTTLVITIFSDYLVESIDGFVTDSGISRTFVGIILLPIVGNAVEHVTAVTVAMKDKMDLAMGVAVGSCTQISLFVVPLTVLVGWALERDMTLNFPPFEVILFVMSVLTVAIVLGNPECNWLEGSLLITTYLLIAVGFWFE 343          
BLAST of NO10G03820 vs. NCBI_GenBank
Match: GAX14177.1 (Ca2+:H+ antiporter [Fistulifera solaris])

HSP 1 Score: 307.0 bits (785), Expect = 1.500e-79
Identity = 187/454 (41.19%), Postives = 241/454 (53.08%), Query Frame = 0
Query:  223 PLGLLSNVFQWGAGPTFIFNFLGLIPLAAILGDFTEEVAEHLGDTIGGLVNASFGNLMEMVIGVQALAQGEIRVVQASMLGSILSNLLLVTGSCFLVGGILHKEQRFNPVASVANLSLLFLASLALVIPTPIGHSYKLSQAHILLISRVAAFCLLSMYLQLIVFQLVTHKHLFDGHGEEVEXXXXXXXXXXXXXXXXXXXEGGKRRAEEEKEATELEEGKRLSSNGVANSVVNGASHPPHAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGLWGSMAGLLIVAVIVCIFSDLVVSSIDGMSAEYGVSKTFVGVILLPLVGNATEHMTAVTVAVKNRMELAMGIAVGSSTQIALFVIPVLTLAGWALGQNMTLEFPPIEIITLIMSIIVVQPVLLNAQSNWLLGSLLITAYCFCGFAFFFEK 677
            PL L+S  F WGA   F  NF+ LIP A+ILGDFTEE+A H  +TIGGL+NASFGN +E+V+ + AL  GEIRVVQ S+LGSI SNLLLV G CF  GG+ HKEQ+FN  ++ AN+ LL L+S+AL +PTP    Y L  + +LLISR+AA  LL MY QL+VFQL TH  +F+  G++                                                                                                                           + +  ++AGLL   ++V  FSD +V SIDG +   G+S+TFVG+ILLP+VGNA EH+TAVTVA+K++M+LAMGIA+GSSTQI+L V+P+  L GW +G +MTL FP  EII  ++SI+ V  VL N   NWL GSLLIT Y      F+FEK
Sbjct:  126 PLALVSVYFHWGATWVFWLNFMTLIPFASILGDFTEELALHTNETIGGLINASFGNAVEVVVAINALLAGEIRVVQGSLLGSIFSNLLLVLGCCFFFGGLKHKEQKFNATSATANMGLLALSSIALALPTPFAQYYNLHDSEVLLISRLAAIFLLFMYAQLLVFQLHTHADIFENDGDDA----------------------------------------------------------------------------------------------------------------------PFTRISMPVALAGLLTTTLLVAFFSDFLVESIDGFTEASGISRTFVGIILLPIVGNAVEHVTAVTVAMKDKMDLAMGIALGSSTQISLLVVPLTVLVGWIVGVDMTLNFPHFEIIMYVLSILTVSIVLSNPTCNWLEGSLLITTYFMIAVGFWFEK 461          
BLAST of NO10G03820 vs. NCBI_GenBank
Match: GAX28895.1 (Ca2+:H+ antiporter [Fistulifera solaris])

HSP 1 Score: 304.3 bits (778), Expect = 9.600e-79
Identity = 185/454 (40.75%), Postives = 240/454 (52.86%), Query Frame = 0
Query:  223 PLGLLSNVFQWGAGPTFIFNFLGLIPLAAILGDFTEEVAEHLGDTIGGLVNASFGNLMEMVIGVQALAQGEIRVVQASMLGSILSNLLLVTGSCFLVGGILHKEQRFNPVASVANLSLLFLASLALVIPTPIGHSYKLSQAHILLISRVAAFCLLSMYLQLIVFQLVTHKHLFDGHGEEVEXXXXXXXXXXXXXXXXXXXEGGKRRAEEEKEATELEEGKRLSSNGVANSVVNGASHPPHAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGLWGSMAGLLIVAVIVCIFSDLVVSSIDGMSAEYGVSKTFVGVILLPLVGNATEHMTAVTVAVKNRMELAMGIAVGSSTQIALFVIPVLTLAGWALGQNMTLEFPPIEIITLIMSIIVVQPVLLNAQSNWLLGSLLITAYCFCGFAFFFEK 677
            PL L+S  F WGA   F  NF+ LIP A+ILGDFTEE+A H  +TIGGL+NASFGN +E+V+ + AL  GEIRVVQ S+LGSI SNLLLV G CF  GG+ HKEQ+FN  ++ AN+ LL L+S+AL +PTP    Y L  + +LL+SR+AA  LL MY QL+VFQL TH  +F+  G++                                                                                                                           + +  ++ GLL   ++V  FSD +V SIDG +   G+S+TFVG+ILLP+VGNA EH+TAVTVA+K++M+LAMGIA+GSSTQI+L V+P+  L GW +G +MTL FP  EII  ++SI+ V  VL N   NWL GSLLIT Y      F+FEK
Sbjct:  127 PLALVSVYFHWGATWVFWLNFMTLIPFASILGDFTEELALHTNETIGGLINASFGNAVEVVVAINALLAGEIRVVQGSLLGSIFSNLLLVLGCCFFFGGLKHKEQKFNATSATANMGLLALSSIALALPTPFAQYYNLHDSEVLLVSRLAAVFLLFMYAQLLVFQLHTHADIFENDGDDA----------------------------------------------------------------------------------------------------------------------PFTRITMPVALVGLLTTTLLVAFFSDFLVESIDGFTEASGISRTFVGIILLPIVGNAVEHVTAVTVAMKDKMDLAMGIALGSSTQISLLVVPLTVLVGWIVGVDMTLNFPHFEIIMYVLSILTVSIVLANPTCNWLEGSLLITTYFMIAVGFWFEK 462          
BLAST of NO10G03820 vs. NCBI_GenBank
Match: GAX14176.1 (Ca2+:H+ antiporter [Fistulifera solaris])

HSP 1 Score: 300.1 bits (767), Expect = 1.800e-77
Identity = 186/454 (40.97%), Postives = 244/454 (53.74%), Query Frame = 0
Query:  223 PLGLLSNVFQWGAGPTFIFNFLGLIPLAAILGDFTEEVAEHLGDTIGGLVNASFGNLMEMVIGVQALAQGEIRVVQASMLGSILSNLLLVTGSCFLVGGILHKEQRFNPVASVANLSLLFLASLALVIPTPIGHSYKLSQAHILLISRVAAFCLLSMYLQLIVFQLVTHKHLFDGHGEEVEXXXXXXXXXXXXXXXXXXXEGGKRRAEEEKEATELEEGKRLSSNGVANSVVNGASHPPHAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGLWGSMAGLLIVAVIVCIFSDLVVSSIDGMSAEYGVSKTFVGVILLPLVGNATEHMTAVTVAVKNRMELAMGIAVGSSTQIALFVIPVLTLAGWALGQNMTLEFPPIEIITLIMSIIVVQPVLLNAQSNWLLGSLLITAYCFCGFAFFFEK 677
            P  LLS  F+ GA   F  NF+ +IPLA+ILGDFTEE+A H  DTIGGL+NASFGN +E+V+ + AL  GEIRVVQ S+LGSI SNLLLV GSCF  GG+ H+EQ FN  A+ AN+ LL L+S+ALV+PTP    Y+L    +L++SR+AA  LL MY QL+VFQL TH ++F                                           EEG+   S  ++ +V                                                                            ++ GLL+  ++V +FS+ +V SIDG +   G+S+TFVG++L+P+VGNA EH+TAVTVA+KN+M+LAMGIA+GSSTQI+L V+P+  + GW  G +MTL FP  EI   I+SI  V  VL N   NWL GSLLIT Y      F++EK
Sbjct:   80 PFALLSFYFRMGATWVFWLNFITMIPLASILGDFTEELALHTNDTIGGLINASFGNAVEVVVAINALLAGEIRVVQGSLLGSIFSNLLLVLGSCFFFGGLRHQEQSFNATAASANMGLLALSSIALVLPTPFAEYYELHDEQVLMVSRLAAVFLLCMYAQLLVFQLHTHTNMFQN-----------------------------------------EEGEDEQSAKISMTV----------------------------------------------------------------------------AVFGLLVTTLLVALFSNFLVDSIDGFTEASGISRTFVGIVLIPIVGNAVEHITAVTVAMKNKMDLAMGIALGSSTQISLLVVPLTVIVGWVAGVDMTLNFPHFEIALYILSIFTVSIVLSNPTCNWLEGSLLITTYIMLAVGFWYEK 416          
BLAST of NO10G03820 vs. NCBI_GenBank
Match: GAX28896.1 (Ca2+:H+ antiporter [Fistulifera solaris])

HSP 1 Score: 298.9 bits (764), Expect = 4.000e-77
Identity = 187/454 (41.19%), Postives = 244/454 (53.74%), Query Frame = 0
Query:  223 PLGLLSNVFQWGAGPTFIFNFLGLIPLAAILGDFTEEVAEHLGDTIGGLVNASFGNLMEMVIGVQALAQGEIRVVQASMLGSILSNLLLVTGSCFLVGGILHKEQRFNPVASVANLSLLFLASLALVIPTPIGHSYKLSQAHILLISRVAAFCLLSMYLQLIVFQLVTHKHLFDGHGEEVEXXXXXXXXXXXXXXXXXXXEGGKRRAEEEKEATELEEGKRLSSNGVANSVVNGASHPPHAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGLWGSMAGLLIVAVIVCIFSDLVVSSIDGMSAEYGVSKTFVGVILLPLVGNATEHMTAVTVAVKNRMELAMGIAVGSSTQIALFVIPVLTLAGWALGQNMTLEFPPIEIITLIMSIIVVQPVLLNAQSNWLLGSLLITAYCFCGFAFFFEK 677
            P  LLS   Q GA   F  NF+ +IPLA+ILGDFTEE+A H  DTIGGL+NASFGN +E+V+ + AL  GEIRVVQ S+LGSI SNLLLV GSCF  GG+ H+EQ FN  A+ AN+ LL L+S+ALV+PTP    Y+L    +L++SR+AA  LL MY QL+VFQL TH ++F                                           EEG+   S  V+ +V                                                                            ++ GLL+  ++V +FS+ +V SIDG +   G+S+TFVG++L+P+VGNA EH+TAVTVA+KN+M+LAMGIA+GSSTQI+L V+P+  + GW +G +MTL FP  EI   I+SI  V  VL N   NWL GSLLIT Y      F++EK
Sbjct:   80 PFALLSFYSQIGATWVFWLNFITMIPLASILGDFTEELALHTNDTIGGLINASFGNAVEVVVAINALLAGEIRVVQGSLLGSIFSNLLLVLGSCFFFGGLRHQEQSFNATAASANMGLLALSSIALVLPTPFAEYYELHDEQVLMVSRLAAVFLLCMYAQLLVFQLHTHTNIFQN-----------------------------------------EEGEDEQSARVSMTV----------------------------------------------------------------------------AVFGLLVTTLLVALFSNFLVDSIDGFTEASGISRTFVGIVLIPIVGNAVEHITAVTVAMKNKMDLAMGIALGSSTQISLLVVPLTVIVGWVVGVDMTLNFPHFEIALYILSIFTVSIVLSNPTCNWLEGSLLITTYVMLAVGFWYEK 416          
BLAST of NO10G03820 vs. NCBI_GenBank
Match: OEU15759.1 (calcium/proton exchanger [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 293.5 bits (750), Expect = 1.700e-75
Identity = 191/500 (38.20%), Postives = 265/500 (53.00%), Query Frame = 0
Query:  177 MHSSVNEGVKGNGMSPGEKKHKKPFLCRTLRHVLFCRYLNVLMLFLPLGLLSNVFQWGAGPTFIFNFLGLIPLAAILGDFTEEVAEHLGDTIGGLVNASFGNLMEMVIGVQALAQGEIRVVQASMLGSILSNLLLVTGSCFLVGGILHKEQRFNPVASVANLSLLFLASLALVIPTPIGHSYKLSQAHILLISRVAAFCLLSMYLQLIVFQLVTHKHLFDGHGEEVEXXXXXXXXXXXXXXXXXXXEGGKRRAEEEKEATELEEGKRLSSNGVANSVVNGASHPPHAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGLWGSMAGLLIVAVIVCIFSDLVVSSIDGMSAEYGVSKTFVGVILLPLVGNATEHMTAVTVAVKNRMELAMGIAVGSSTQIALFVIPVLTLAGWALGQNMTLEFPPIEIITLIMSIIVVQPVLLNAQSNWLLGSLLITAYCFCGFAFFFEK 677
            M+ S+NE    NG S  EK  +  ++   L  +   + ++ L+LF P  L +    WG    F  NFL +IPLA+ILGDFTEE A H  D +GGL+NASFGN +E+V+G  AL + EIRVVQASM+GSI SNLLLV G CF  GG+ +KEQ+F+ + +  ++ LL L+S+AL++PTP    Y++    +L+ISR +A  L+  Y+QL+ FQL TH+ +F    EE +                           EE+EA+                                                                                        + +W ++ GL +   +V IFS+ +V SI+G   E GVSKTFVG+I+LP+VGNA EH+TAV+VA+KN+M+LA+G+AVGSSTQI+LFV+PV  + GW +G+ MTL +P  EI   I+SI  V   L   +SNWLLGS+LIT Y   G  F+FEK
Sbjct:    1 MYGSINESAAFNG-SIKEKTEENIWINFLL--IWIGKPISFLLLFFPFALAAYYLNWGPQWVFWLNFLVMIPLASILGDFTEEAALHTNDVVGGLLNASFGNAVEVVVGFNALMKDEIRVVQASMIGSIFSNLLLVLGCCFXXGGLYYKEQKFSSLNATTSMGLLALSSIALILPTPFAEYYEIEDKDVLIISRASACFLIFTYVQLLYFQLFTHREIF----EEDDI--------------------------EEEEAS----------------------------------------------------------------------------------------IPMWMALTGLCLTTGLVTIFSNFLVDSINGFCTESGVSKTFVGLIILPIVGNAVEHITAVSVAMKNKMDLAIGVAVGSSTQISLFVVPVTVIFGWCVGKPMTLNYPIYEISLYILSIFTVSVCLGTGKSNWLLGSVLITTYFMLGIGFWFEK 379          
BLAST of NO10G03820 vs. NCBI_GenBank
Match: XP_009822055.1 (calcium/proton exchanger [Aphanomyces astaci] >ETV89655.1 calcium/proton exchanger [Aphanomyces astaci])

HSP 1 Score: 276.6 bits (706), Expect = 2.100e-70
Identity = 177/466 (37.98%), Postives = 254/466 (54.51%), Query Frame = 0
Query:  214 YLNVLMLFLPLGLLSNVFQWGAGPTFIFNFLGLIPLAAILGDFTEEVAEHLGDTIGGLVNASFGNLMEMVIGVQALAQGEIRVVQASMLGSILSNLLLVTGSCFL---VGGILHKEQRFNPVASVANLSLLFLASLALVIPTPIGHSYKLSQA-----HILLISRVAAFCLLSMYLQLIVFQLVTHKHLFDGHGEEVEXXXXXXXXXXXXXXXXXXXEGGKRRAEEEKEATELEEGKRLSSNGVANSVVNGASHPPHAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGLWGSMAGLLIVAVIVCIFSDLVVSSIDGMSAEYGVSKTFVGVILLPLVGNATEHMTAVTVAVKNRMELAMGIAVGSSTQIALFVIPVLTLAGWALGQNMTLEFPPIEIITLIMSIIVVQPVLLNAQSNWLLGSLLITAYCFCGFA 672
            Y+NVL+L +P+   S + +WG  P F+ NFL ++PLA ILG+ TE +AEH GDTIGGLVNA+FGN +E++I V AL +GEI +VQ+S+LGS+LSNLLLV G CF+   +GG+   E  F+  ++  N+SLLF+ S A+++PT   +S   S A      +L++SRV+A  L++MYLQL+VFQL TH+                                 +       EA+    G+ L             SH P                                                               + LW S+  L +   +V IFS+ +V+S+DG +    +S++FVG+ILLP+VGNA EH+TA+ VA+KN MELA+G+AVGS+TQI+LFV+P   +AGW +GQ MTL FP  + +T ++SI++V  ++ N  SNWL GS+L+T YC  G A
Sbjct:  108 YVNVLLLLMPVAAYSYIDKWGDIPIFVLNFLAMMPLANILGEATETLAEHCGDTIGGLVNATFGNAVEVIIAVFALKKGEIALVQSSLLGSMLSNLLLVLGCCFIAAHIGGV--SETSFSGRSAATNMSLLFVTSFAMLVPTYYHYSNFASSAAVREEEVLVMSRVSAIFLIAMYLQLLVFQLHTHR--------------------------------PRPTVVPALEASAAVAGESLDEPD---------SHEPQ--------------------------------------------------------------MSLWMSVVVLAVSTALVSIFSEFLVASVDGFTESANISRSFVGIILLPIVGNAVEHVTAIKVALKNNMELALGVAVGSATQISLFVVPFCVVAGWVMGQPMTLAFPTFDAVTYVISIVIVYAIVSNGTSNWLEGSMLLTLYCLIGVA 468          
BLAST of NO10G03820 vs. NCBI_GenBank
Match: XP_008862200.1 (calcium/proton exchanger [Aphanomyces invadans] >ETW08395.1 calcium/proton exchanger [Aphanomyces invadans])

HSP 1 Score: 273.9 bits (699), Expect = 1.400e-69
Identity = 179/479 (37.37%), Postives = 252/479 (52.61%), Query Frame = 0
Query:  200 PFLCRTLRHVLFCRYLNVLMLFLPLGLLSNVFQWGAGPTFIFNFLGLIPLAAILGDFTEEVAEHLGDTIGGLVNASFGNLMEMVIGVQALAQGEIRVVQASMLGSILSNLLLVTGSCFLVGGILHKEQRFNPVASVANLSLLFLASLALVIPTPIGHS----YKLSQAHILLISRVAAFCLLSMYLQLIVFQLVTHKHLFDGHGEEVEXXXXXXXXXXXXXXXXXXXEGGKRRAEEEKEATELEEGKRLSSNGVANSVVNGASHPPHAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGLWGSMAGLLIVAVIVCIFSDLVVSSIDGMSAEYGVSKTFVGVILLPLVGNATEHMTAVTVAVKNRMELAMGIAVGSSTQIALFVIPVLTLAGWALGQNMTLEFPPIEIITLIMSIIVVQPVLLNAQSNWLLGSLLITAYCFCGFAFFF 675
            P L  TL  V    Y+N+L+LFLP  + S+  +WG    F+FNF  +IPLA I+GD TEEVA H GDTIGGLVNA+FGN +E++I + AL  G+I VVQ S+LGSILSNLLLV G CF+ GG+     +FN   + AN SLL +++ A+++P+   H+       ++A +L +S +AA  LL MY+QL+ FQ+ TH HLFD                                   E + T  +EG                  P H                                                              + L  S+  L +  V+V I S+ +V SIDG  A   VSK+FVG+I+LP+VGNA EH+TAV VA+K++MELAMG+AVGS+TQI+LFV+PV  LAGW + + MTL FP  E +T + ++++V  ++++ +S+WL GS+L+T Y     A  +
Sbjct:   37 PTLAHTLYFVATDSYINLLLLFLPFAIYSSYAEWGDTIVFVFNFASMIPLAKIIGDATEEVAFHTGDTIGGLVNATFGNAVEVIIAIFALRDGQIAVVQGSLLGSILSNLLLVLGCCFVAGGVTQSVSKFNETNASANSSLLMVSAFAMLVPSYYKHTTYEEKPETKAIVLGLSHIAAIFLLLMYIQLLYFQMKTHAHLFD---------------------------------SSENDLTADDEG-------------IDDDTPDHT------------------------------------------------------------NMTLSSSVIVLGLATVLVSILSEYLVGSIDGFVASAHVSKSFVGIIVLPIVGNAVEHLTAVRVALKHKMELAMGVAVGSATQISLFVVPVTVLAGWIMDKPMTLAFPTFEAVTYVSAVVIVYAIIVDGKSHWLEGSMLLTLYGLIAIALLW 409          
BLAST of NO10G03820 vs. NCBI_GenBank
Match: XP_008879721.1 (calcium/proton exchanger [Aphanomyces invadans] >ETV91602.1 calcium/proton exchanger [Aphanomyces invadans])

HSP 1 Score: 270.4 bits (690), Expect = 1.500e-68
Identity = 177/479 (36.95%), Postives = 253/479 (52.82%), Query Frame = 0
Query:  200 PFLCRTLRHVLFCRYLNVLMLFLPLGLLSNVFQWGAGPTFIFNFLGLIPLAAILGDFTEEVAEHLGDTIGGLVNASFGNLMEMVIGVQALAQGEIRVVQASMLGSILSNLLLVTGSCFLVGGILHKEQRFNPVASVANLSLLFLASLALVIPTPIGHS----YKLSQAHILLISRVAAFCLLSMYLQLIVFQLVTHKHLFDGHGEEVEXXXXXXXXXXXXXXXXXXXEGGKRRAEEEKEATELEEGKRLSSNGVANSVVNGASHPPHAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGLWGSMAGLLIVAVIVCIFSDLVVSSIDGMSAEYGVSKTFVGVILLPLVGNATEHMTAVTVAVKNRMELAMGIAVGSSTQIALFVIPVLTLAGWALGQNMTLEFPPIEIITLIMSIIVVQPVLLNAQSNWLLGSLLITAYCFCGFAFFF 675
            P L  +L  V    Y+NVL++ LP  + S   QWG    F FNFL +IPLA ++GD TEEVA H GDTIGGLVNA+FGN +E++I + AL +G+I VVQAS+LGSILSNLLLV G CF+ GG+     +FN  ++ AN SLL +++ A+++P+   ++       ++A +L +S +AA  LL MY+QL+ FQ+ TH HLF+                                    ++AT                  +                                                                     + L  S+  L +  V+V I S+ +V+SIDG  A   VSK+FVG+I+LP+VGNA EHMTAV VA+K++MELAMG+AVGS+TQI+LFV+PV  LAGWA+ Q M+L FP  E +T + S+++V  ++++ +S+WL GS+L+T Y F   A  +
Sbjct:   31 PTLAHSLYVVATDSYINVLLVCLPFAIYSYYAQWGDAAVFAFNFLTMIPLAKVIGDATEEVAFHTGDTIGGLVNATFGNAVEVIIAIFALREGQISVVQASLLGSILSNLLLVLGCCFVAGGVTQSVSKFNETSASANSSLLMVSAFAMLVPSYYQYTTYDDKPETKAIVLGLSHIAAVFLLLMYMQLLYFQMKTHAHLFN-----------------------------------SRDATXXXXXXXXXXXXXXXXXHSN--------------------------------------------------------------------MTLGSSIVILGLATVLVSILSEYLVASIDGFVASAHVSKSFVGIIILPIVGNAVEHMTAVRVALKHKMELAMGVAVGSATQISLFVVPVTVLAGWAMDQPMSLAFPTFEAVTYVTSVVIVYAIIVDGKSHWLEGSMLLTIYLFIAVALLW 406          
The following BLAST results are available for this feature:
BLAST of NO10G03820 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM25576.16.600e-11262.86ca2 :cation antiporter family, partial [Nannochlor... [more]
XP_002178946.16.400e-8341.21predicted protein, partial [Phaeodactylum tricornu... [more]
GAX14177.11.500e-7941.19Ca2+:H+ antiporter [Fistulifera solaris][more]
GAX28895.19.600e-7940.75Ca2+:H+ antiporter [Fistulifera solaris][more]
GAX14176.11.800e-7740.97Ca2+:H+ antiporter [Fistulifera solaris][more]
GAX28896.14.000e-7741.19Ca2+:H+ antiporter [Fistulifera solaris][more]
OEU15759.11.700e-7538.20calcium/proton exchanger [Fragilariopsis cylindrus... [more]
XP_009822055.12.100e-7037.98calcium/proton exchanger [Aphanomyces astaci] >ETV... [more]
XP_008862200.11.400e-6937.37calcium/proton exchanger [Aphanomyces invadans] >E... [more]
XP_008879721.11.500e-6836.95calcium/proton exchanger [Aphanomyces invadans] >E... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL052nonsL052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR004ncniR004Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR016ngnoR016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001236NSK001236Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO10G03820.1NO10G03820.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|623014gene_3826Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100614g3gene4931Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO10G03820.1NO10G03820.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO10G03820 ID=NO10G03820|Name=NO10G03820|organism=Nannochloropsis oceanica|type=gene|length=5195bp
ACAGTTTACGACGATACCGGGCGCTGGACTTTTTAAAGCCTGGCTTGATC
TCTTCAAGATCATTCCGTTCAAGCGGCACGCAGCAAGGTCATCCGCTGCG
CAGCTCTGGAGCGCATAGGCACGACGAAGGAGAGCGAGAGCCACGACAAC
GACCAGGACAAGGACAATAACGTCAAACGCAAAGCAAGTGAGAAGATGCC
GAACGGTGTAGGTGTGCGAACGGAGCTAGCGCCTATCCCTCCCACCCGTC
CAAGCCCAGCCCAGCCCATGCGCGAGGGTACCACGAGCGACTCTTTGCTG
GACCGCAGTGGAAATGGACGGGACAGgtacggcatggggagatgggagag
gagaggaaaggacaactggaaggatggcttgtaggggggataaagagtga
ttggcaagcagggtagggtagagataggcataagcgttgacgccatcttg
acaagaagcaggccagcaaagcgacgagcactcctatgaatggaccggac
agcacacggcacatccatgacgctacttgccttagtcaagtctgtcacag
aaacatggttgagcttgacacccctacctccctccctccctccctccgct
acctcgccggcccccttccccagGAGCCAGAAAGGCGGCCATCGGAGGTC
GCTTTCTGCCGGAGAGCCTCTTCCGCGGCAATCCAGTATTGAGTCGTTAG
GGGAGAGCTCCACCACGCCTAGAAACTCCAAAGTGGCCTTGgtagggagg
gagggagggagggagggaaggagggagggagggaaggcagttggggggat
tttcctcgcgtcttgtgaagctggttgtcgtaagagtcgtggacagactg
actgaatttggaaggccttggatcgtcttgggacggagggagggagggag
gggcagagggaggggcggagggagggacgtagggaaggcgagcagtccac
catttctcgtgggtaatcatgacggctttattggcttacctaatccatcc
atccccatcatccatccatccatccctccctccctccctttttcttccca
gGGCCACTCTCTCCTCACCGAGGCGCGTCGTTTCATCAAGAAGAAGCCTG
CACCTATCAAGAGGAGGTGGGAGATCATCCGTGATgtgagtcaaggagga
ggggcagagggagggggggagggagtgggggaggaaggggcgggtcccct
tgatattcttcttgtatgtatcgtcagccaacatagcccctgcgctcact
cgcccatccctctctccttccttccttccctctctctctccctccctctc
tccctcccttcctttctccccccctccctccctccctcctttctagTCCC
TCGTCGGGCCCGAGGGCACATCCCTCCTCTCCCGCTTGTCGGGCCGATAT
GGGAACATTAAGGACCTCTTGCATGATGATATGGCGGAGGGGGAGGAAGG
AAGgtgagaggcggagggagggagggagggagggaaagaaggagagagga
atggagggagtagagcaaggggtgctatccataaacagacgatcttatcg
gcctacctgacccttacaataatatccccctccctccttcccttcctccc
tccctccctccctccctccctcagGATGGCTTCCGGCGATGGGCGAGGGT
ATGGCACACTAGAGGATGGAGTGGAGATCAAAAGACGgtacgtctgcctg
cctctccctcccttcccccccccctccctccctccctccctcttctctcg
ctgttgttggggcctacgcgggcatctgggctgctcctctggcctcctcc
cccttcatcttcttccctccctccctccctccctccccccctccctcagC
GACTCGCGGGGGAGGAATGACGTCATGCACAGCAGTGTCAATGAGGGCGT
GAAGGGAAACGGGATGAGCCCCGGCGAGAAGAAGCATAAAAAGCCCTTCT
TGTGCAGGgtgaggaaggggagggagggagggagggagggagggagggtg
catcggtcataaagaggcatggaaagaaaccacctttgattctatgaatt
gcgtgtccgtaaaaactcttgtatctccttccctccctccctccctcccg
cccgccctccctccctccctcctcctagACCCTGCGACATGTCCTCTTCT
GCCGATACCTGAATGTCCTCATGCTCTTCCTCCCCCTCGGCCTCCTCTCG
AACGTCTTCCAATGGGGCGCCGGCCCCACCTTCATCTTCAACTTCCTGgt
tcgtcctccctccctcccgcccttcctccctccctccctccctccctccc
tccctccctccctccctccctccctccagggcctcgtttccccggctcgg
cggccatccggggagctgcctggcaaggaggcgacaaactcaccctccct
ccctccctccctccctccctccctccctccctccctccctccctccctcc
ctcccttcctctttccctccagGGCCTGATTCCCCTGGCTGCCATCCTGG
GCGACTTCACGGAGGAGGTGGCGGAGCATTTAGGGGACACTATTGGAGGG
CTCGTCAACGCCAGCTTCGGGAACCTGATGGgtagggagcgagggaggga
gggagcgagggagggagggagggagggagggagagggagggggagggctg
gtcaatagaagccttgggacgtagatcgggagacagggagggagggaggg
agggagggaggggcaagcatcccttgctgagacgatggcttttccctccc
tcccctttcccctttcctccttagAGATGGTGATAGGCGTGCAGGCGTTG
GCCCAGGGGGAGATCCGGGTAGTCCAAGCCTCCATGCTCGGCTCCATCTT
GTCGAACCTCCTCCTCGTTACAGGCTCCTGCTTCCTCGTCGGTGGTATCC
TGCACAAGGAGCAGCGGTTTAATCCTGTGGCCAGCGTGGCCAACCTGTCC
TTGCTCTTCCTCGCATCCTTGGCACTGGTGATCCCCACGCCTATCGGgta
aggaaggagggagggagggagggagggagggagggagggagggagggagg
gagggagggagggagagagggagggagggagggagagagggagagagggc
ggttgcgattggagatgaatgtccacgcacaaccatgcacccatcatctc
ctccctccctccctccctccctccctccctccctccttcccccatccctc
tctcagGCACTCGTATAAACTCAGTCAAGCGCATATTTTGCTCATCTCCC
GCGTAGCTGCCTTTTGCCTCCTTTCGATGTATCTGCAACTGATTGTGTTC
CAGCTCGTTACTCACAAACACTTGTTCGACGGTCACGGGGAGGAGGTAGA
GGAGGAAGAGGAGGAGGAGGACGGAAGCGAGGACGGAAGCGAGGACGGAA
GCGAGGGAGAGGGGGGCAAGAGGAGAGCGGAGGAAGAGAAGGAAGCAACA
GAACTAGAAGAGGGCAAGCGTCTATCTTCGAATGGAGTCGCAAATTCTGT
TGTAAACGGTGCTTCTCACCCTCCTCATGCTGCTGCAGCAGTAGCAGCAG
CCAACGGCACACACCACAAGAGCAAGAGCAGAAGCACGTGCAGCAATCAC
CACCACCACCATCAACAGCAGCAGCAGCGACAGGCAGAGCAGCACCAGCA
CCAGCACCAGCACCGGCACTACATGGAGGACGAGGACGAGGACGAGAACG
GCGACGGAGTGGACTTGGGGCTTTGGGGCTCGATGGCAGGCCTTCTAATC
GTCGCTGTAATCGTATGCATTTTTTCGGACCTGGTCGTTTCGTCTATCGA
TGGGATGAGCGCGGAGTACGGCGTCAGCAAGACATTCGTGGGAGTGATTT
TGTTGCCACTGGTGGGCAATGCCACGGAGCATATGACGGCGGgtaaggag
agagggagggagggaaggggggagggaaagggggagaaagggaagggggg
gagggggcaaaggggggagaagggagggggcagggaagaagggaaggatc
aaatgggaacgaagggagagtgaaaggaaggaagtgacgagagtgcgctt
tacttctctccaccacgcgctgagcatgtttttcatcttccctcccacat
tccctccttcccccactcacttcctcccttcattcccacccatccgcaca
tagTGACAGTCGCAGTCAAGAACAGGATGGAGCTGGCCATGGGCATCGCT
GTCGGTAGCTCCACACAGATCGCCCTCTTCGTCATTCCTGTCCTTACCCT
GGCAGGGTGGGCCTTAGGGCAAAACATGACATTAGAGTTTCCACCAATTG
AGgtaaggaaatagttagggttagggttagggttacgccattccatgcat
tttccctgtttctcaagtcaaacgctcgttcttccgctcactccccggtc
catgtcttggttctttttatttcgtgtttgatcaacgcgcagaccagcat
ctgcgcctttcacaggccttccttcccccccatccaccccccacccacct
gcctcttttttgccacctaccccccaccaccatcaaccaataccagATAA
TCACCCTCATTATGAGCATCATTGTCGTGCAGCCTGTCTTATTAAATGCC
CAGTCGAACTGGCTGCTGGGATCGCTCCTCATCACAGCCTACTGCTTCTG
TGGCTTTGCCTTCTTTTTCGAGAAGCCACCGCTGCCTGGACAGTGAGGAG
CGAGGAGAGGGAGGAGAAGGGAGGGCGTGGAGAAAGAAAGGGGGTGGAGA
GACAGGAGGTATGCCATGGTATGTACAGTAAGGGCAGGAAATAAACAGAG
GCTTGTATGTGCCGAAGAAAATTGGAATAGAAAAAATAACAGAATAGAAA
GAGGGAAACAACTGACACGACCAAGGGAGATGTGGAAAGGGAGAATGCGG
GGGAGGGGATAAACGTGGTTTTCGAAGTGGGAAAACCCTGGGTATTATTT
GAAAAGCAAGAGTATTGAAAAGAACTGCATGATATCGCGCTGGTCTGTAG
AAATTGCAAAGGGAAAGAAGGGAGACCCATGTCGGATTTTGGTGAGGCTT
GATTTAGTGGGCGAGAATCGCTTGTACCTGTCTGCTGCGCTCCGCATTTT
TGGAGAAACTTGTTTCCCCTCCTTGAAAAGAAAAGATGATCGAGCCTTGC
GGTGCCGAAGAACAGCGACAGGGATACGATGCGGACGAAGGAGCG
back to top

protein sequence of NO10G03820.1

>NO10G03820.1-protein ID=NO10G03820.1-protein|Name=NO10G03820.1|organism=Nannochloropsis oceanica|type=polypeptide|length=683bp
MPNGVGVRTELAPIPPTRPSPAQPMREGTTSDSLLDRSGNGRDRSQKGGH
RRSLSAGEPLPRQSSIESLGESSTTPRNSKVALGHSLLTEARRFIKKKPA
PIKRRWEIIRDSLVGPEGTSLLSRLSGRYGNIKDLLHDDMAEGEEGRMAS
GDGRGYGTLEDGVEIKRRDSRGRNDVMHSSVNEGVKGNGMSPGEKKHKKP
FLCRTLRHVLFCRYLNVLMLFLPLGLLSNVFQWGAGPTFIFNFLGLIPLA
AILGDFTEEVAEHLGDTIGGLVNASFGNLMEMVIGVQALAQGEIRVVQAS
MLGSILSNLLLVTGSCFLVGGILHKEQRFNPVASVANLSLLFLASLALVI
PTPIGHSYKLSQAHILLISRVAAFCLLSMYLQLIVFQLVTHKHLFDGHGE
EVEEEEEEEDGSEDGSEDGSEGEGGKRRAEEEKEATELEEGKRLSSNGVA
NSVVNGASHPPHAAAAVAAANGTHHKSKSRSTCSNHHHHHQQQQQRQAEQ
HQHQHQHRHYMEDEDEDENGDGVDLGLWGSMAGLLIVAVIVCIFSDLVVS
SIDGMSAEYGVSKTFVGVILLPLVGNATEHMTAVTVAVKNRMELAMGIAV
GSSTQIALFVIPVLTLAGWALGQNMTLEFPPIEIITLIMSIIVVQPVLLN
AQSNWLLGSLLITAYCFCGFAFFFEKPPLPGQ*
back to top
Synonyms
Publications