NO10G03740, NO10G03740 (gene) Nannochloropsis oceanica

Overview
NameNO10G03740
Unique NameNO10G03740
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1155
Alignment locationchr10:1080756..1081910 +

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Properties
Property NameValue
DescriptionChaperone protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:1080756..1081910 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036869J_dom_sf
IPR001623DnaJ_domain
Homology
BLAST of NO10G03740 vs. NCBI_GenBank
Match: EWM25569.1 (chaperone protein [Nannochloropsis gaditana])

HSP 1 Score: 349.7 bits (896), Expect = 5.900e-93
Identity = 172/202 (85.15%), Postives = 186/202 (92.08%), Query Frame = 0
Query:    1 MKDYYVILQVSRSASIQDIKVAYKNFALRLHPDVTGNNEDKTRIFKQLTEAYNILSDQDARRKYDSKLGISRVSSFYSPGVGKEGGNQGDIRAPRPPPDFKIFDHDEWNAWHYGEGEGVNKEPFVKRRNPFMDIRPDEKGAQFFIRQKTKEVQGVVDQSYKKGKAERDLIVERMNARRAARMAGKVYKSDSASAGGSSCTIS 203
            MKDYYVILQVSRSA++Q+IKVAYKNFAL+LHPDVTGNNEDKTRIFKQLTEAYNILSDQDAR+KYDSKLGISRVS+FY PG G   G +GDIRAPRPPPDFKIFDHDEWNAWHYGEGEGV+KEPFVKRRNPFMDIRPD KGAQFF+RQKTKE Q V+DQSYK+GKAE+DLIVERM ARRAARMA + Y  DSASAGG SC I+
Sbjct:    1 MKDYYVILQVSRSATLQEIKVAYKNFALKLHPDVTGNNEDKTRIFKQLTEAYNILSDQDARQKYDSKLGISRVSTFYRPG-GSHPGGEGDIRAPRPPPDFKIFDHDEWNAWHYGEGEGVHKEPFVKRRNPFMDIRPDNKGAQFFVRQKTKETQSVIDQSYKRGKAEKDLIVERMKARRAARMANRGYNEDSASAGG-SCVIA 200          
BLAST of NO10G03740 vs. NCBI_GenBank
Match: CBN78567.1 (Heat shock protein 40 like protein/ DnaJ domain containing protein [Ectocarpus siliculosus])

HSP 1 Score: 114.4 bits (285), Expect = 4.200e-22
Identity = 70/207 (33.82%), Postives = 115/207 (55.56%), Query Frame = 0
Query:    1 MKDYYVILQVSRSASIQDIKVAYKNFALRLHPDVTGNNEDKTRIFKQLTEAYNILSDQDARRKYDSKLGISRVSSFYS--PGVGKEGGNQGDIRAPRPPPDFKIFDHDEWNAWHYGEGEGVNKEPFVKRRNPFMDIRPDEKGAQFFIRQKTKEVQGVVDQSYK-KGKAERDLIVERMNARRAARMAGKVYK--SDSASAGGSSCTIS 203
            M+DYY IL+V+R+A+  +IK AY+  AL +HPDV   ++     FK  +EAY++L+D + RR YD  LG+ +V+S  +      K+   Q  +   +PPP  KI +  EW AWHYG  + V KE FV+  N ++D+  +   A F  ++K ++    V + +K     +R  ++ER+  RR  R+     +  ++  +A    C+IS
Sbjct:    1 MRDYYAILRVARTATNSEIKAAYRQIALAVHPDVNKGDKGSEDEFKDASEAYSVLADTEQRRIYDRTLGVRKVNSSSTRWADAAKKTKAQQPLYTAKPPPGMKIHNEGEWKAWHYGV-DAVQKEAFVQEAN-WLDLEGNRHQAYFRRQEKKEKAMYGVGRGHKFNASRQRHDVIERVRLRREERLKRDRSRRPAEDNAAADDVCSIS 205          
BLAST of NO10G03740 vs. NCBI_GenBank
Match: XP_002902795.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY55965.1 conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 81.6 bits (200), Expect = 3.000e-12
Identity = 46/116 (39.66%), Postives = 67/116 (57.76%), Query Frame = 0
Query:    3 DYYVILQVSRSASIQDIKVAYKNFALRLHPDVTGNNEDKTRIFKQLTEAYNILSDQDARRKYDSKLGISRVSSFYSPGVGKE----GGNQGDIRAPRPPPDFKIFDHDEWNAWHYG 115
            DYY +L V+R++S ++IK AY   A  LHPDVTGN+E K   FK ++EA+++LSD   RR+YD+        S+ + G  +      G   D+RA RP       + + W A+HYG
Sbjct:    5 DYYRVLNVARTSSFKEIKTAYFGLAKSLHPDVTGNDESKAERFKHVSEAHSVLSDPQKRREYDASRPAESFRSYDTSGTTQHPYVATGGAPDLRA-RP---LYGINEEIWLAYHYG 116          
BLAST of NO10G03740 vs. NCBI_GenBank
Match: WP_007858402.1 (hypothetical protein [[Clostridium] citroniae] >EHF01051.1 hypothetical protein HMPREF9469_00283 [ [[Clostridium] citroniae WAL-17108])

HSP 1 Score: 81.3 bits (199), Expect = 3.900e-12
Identity = 50/150 (33.33%), Postives = 80/150 (53.33%), Query Frame = 0
Query:    1 MKDYYVILQVSRSASIQDIKVAYKNFALRLHPDVTGNNEDKTRIFKQLTEAYNILSDQDARRKYDSKLGISRVSSFYSPGVGKEGGNQGDIRAPRPPPDFKIFDHDEWNAWHYGEGEGVNKEPFVKRRNPFMDIRPDEKGAQFFIRQKTK 151
            MKDYY IL VS  A+ ++IK AY+  A + HPDV  ++ +KT+   ++ EAY  L D+ +R++YD K  +   S + +     E  N+ + +  +P PD   F  + +  +  G+G    +    + R P   I+P+E  A FF RQ  K
Sbjct:    1 MKDYYRILGVSEQAAEKEIKAAYRKLAKQYHPDVVQDDAEKTQRMYEIQEAYECLGDEKSRKEYD-KARMRNCSGYQAGKQRSENTNEREEKNGQPAPDMSQF--ERFFGFQPGKGMETYQGKKGEARKPDGPIKPEEMFAAFFGRQNHK 147          
BLAST of NO10G03740 vs. NCBI_GenBank
Match: ETK71628.1 (hypothetical protein L915_21157 [Phytophthora parasitica] >ETL25063.1 hypothetical protein L916_21032 [Phytophthora parasitica] >ETM31543.1 hypothetical protein L914_20902 [Phytophthora parasitica] >ETP29192.1 hypothetical protein F442_21623 [Phytophthora parasitica P10297])

HSP 1 Score: 81.3 bits (199), Expect = 3.900e-12
Identity = 46/116 (39.66%), Postives = 67/116 (57.76%), Query Frame = 0
Query:    3 DYYVILQVSRSASIQDIKVAYKNFALRLHPDVTGNNEDKTRIFKQLTEAYNILSDQDARRKYDSKLGISRVSSFYSPGVGKE----GGNQGDIRAPRPPPDFKIFDHDEWNAWHYG 115
            DYY +L V+R+AS ++IK AY   A  LHPDVTGN+E K   FK ++EA+++LSD   RR+YD+        ++ + G+ +      G   D+RA RP       + + W A HYG
Sbjct:    5 DYYRVLNVARTASFKEIKAAYFQLAKSLHPDVTGNDESKAERFKHVSEAHSVLSDPQKRREYDASRPAESFRTYDTSGMSQHPYAATGGAPDLRA-RP---LYGINEEIWLAHHYG 116          
BLAST of NO10G03740 vs. NCBI_GenBank
Match: ETL78282.1 (hypothetical protein L917_20889 [Phytophthora parasitica] >KUF75681.1 Chaperone protein DnaJ [Phytophthora nicotianae] >KUF99605.1 RAC-beta serine/threonine-protein kinase [Phytophthora nicotianae])

HSP 1 Score: 81.3 bits (199), Expect = 3.900e-12
Identity = 46/116 (39.66%), Postives = 67/116 (57.76%), Query Frame = 0
Query:    3 DYYVILQVSRSASIQDIKVAYKNFALRLHPDVTGNNEDKTRIFKQLTEAYNILSDQDARRKYDSKLGISRVSSFYSPGVGKE----GGNQGDIRAPRPPPDFKIFDHDEWNAWHYG 115
            DYY +L V+R+AS ++IK AY   A  LHPDVTGN+E K   FK ++EA+++LSD   RR+YD+        ++ + G+ +      G   D+RA RP       + + W A HYG
Sbjct:    5 DYYRVLNVARTASFKEIKAAYFQLAKSLHPDVTGNDESKAERFKHVSEAHSVLSDPQKRREYDASRPAESFRTYDTSGMSQHPYAATGGAPDLRA-RP---LYGINEEIWLAHHYG 116          
BLAST of NO10G03740 vs. NCBI_GenBank
Match: XP_024573649.1 (chaperone protein [Plasmopara halstedii] >CEG37280.1 chaperone protein [Plasmopara halstedii])

HSP 1 Score: 79.3 bits (194), Expect = 1.500e-11
Identity = 45/115 (39.13%), Postives = 67/115 (58.26%), Query Frame = 0
Query:    3 DYYVILQVSRSASIQDIKVAYKNFALRLHPDVTGNNEDKTRIFKQLTEAYNILSDQDARRKYDSKLGISRVSSFYSPGVGKEG-GNQGDIRAPRPPPDFKIFDHDEWNAWHYGEG 117
            DYY +L V+R+AS ++IK AY   A  LHPDVTGN+  K   F+ ++EA+++LS+   RR+YD+    +   S  + G+ +      GD    R  P + I D + W A HYG+G
Sbjct:    5 DYYRVLNVARTASSKEIKAAYFQLAKSLHPDVTGNDVSKAERFRYVSEAHSVLSNPQKRREYDTSRPANSFRSCDTSGMTQHPYATMGDGSDLRARPLYGI-DEEVWLAHHYGQG 118          
BLAST of NO10G03740 vs. NCBI_GenBank
Match: XP_014662301.1 (PREDICTED: dnaJ homolog subfamily C member 30-like [Priapulus caudatus])

HSP 1 Score: 78.6 bits (192), Expect = 2.500e-11
Identity = 55/172 (31.98%), Postives = 89/172 (51.74%), Query Frame = 0
Query:    2 KDYYVILQVSRSASIQDIKVAYKNFALRLHPDVTGNNEDKTRIFKQLTEAYNILSDQDARRKYDSKLGISRVSSFYS-------------PGVGKEGGNQGDIR-APRPPPDFKIFDHDEWNAWHYGEGEGVNKEPFVKRR---NPFMDIRPDEKGAQFFIRQKTKEVQGVV 157
            KDYY IL ++R A+   IK A+ + + + HPDV+ ++ +    + Q+TEAY++L +   RRKYDS  G+   S FYS             PG   +  ++G  R +  P    +I+D DE++  HY  G  +N+E   KRR       D+R D      FI +++  + G++
Sbjct:   53 KDYYSILGITRHATQTQIKNAFYDLSKKYHPDVSRDDPNAHAYYTQITEAYDVLGNYHMRRKYDS--GVDTSSGFYSRKTGPTWQKDYPRPGTSSKWTHEGPTRPSGMPHGSTRIYDFDEFHRAHY--GGTINREQQRKRRTRDKSQFDMRQD------FITRRSMIITGLI 214          
BLAST of NO10G03740 vs. NCBI_GenBank
Match: XP_008608747.1 (hypothetical protein SDRG_04838 [Saprolegnia diclina VS20] >EQC37814.1 hypothetical protein SDRG_04838 [Saprolegnia diclina VS20])

HSP 1 Score: 77.8 bits (190), Expect = 4.300e-11
Identity = 43/113 (38.05%), Postives = 64/113 (56.64%), Query Frame = 0
Query:    3 DYYVILQVSRSASIQDIKVAYKNFALRLHPDVTGNNEDKTRIFKQLTEAYNILSDQDARRKYDSKLGI-SRVSSFYSPGVGKEGGNQGDIRAPRPPPDFKIFDHDEWNAWHYG 115
            DYY ++ ++R+A+ +DIK AY   A +LHPDV GN+ +K  +FK+++EA ++LSD   R +YD++     R  + YSP        Q   RA  P       + D W A HYG
Sbjct:   17 DYYRVMNLTRNATQKDIKRAYLKLARQLHPDVNGNDLEKAALFKKVSEANSVLSDPAKRAEYDNRFSYRDRGETHYSP------KGQTSARASAPRGSHYGINEDVWYAHHYG 123          
BLAST of NO10G03740 vs. NCBI_GenBank
Match: WP_010933150.1 (molecular chaperone DnaJ [Chlorobaculum tepidum] >NP_662369.1 molecular chaperone DnaJ [Chlorobaculum tepidum TLS] >Q8KCD8.1 RecName: Full=Chaperone protein DnaJ >AAM72711.1 dnaJ protein [Chlorobaculum tepidum TLS])

HSP 1 Score: 77.4 bits (189), Expect = 5.600e-11
Identity = 40/90 (44.44%), Postives = 56/90 (62.22%), Query Frame = 0
Query:    2 KDYYVILQVSRSASIQDIKVAYKNFALRLHPDVTGNNEDKTRIFKQLTEAYNILSDQDARRKYDSKLGISRVSSFYSPGVGKEGGNQGDI 92
            +DYY IL V+RSA   +IK AY+  AL+ HPD   +N++    FK++ EAY +LS+ D RR+YD + G + V S  + G G  G   GDI
Sbjct:    3 RDYYEILGVARSADKDEIKKAYRKLALKYHPDKNPDNKEAEEKFKEVNEAYEVLSNDDKRRRYD-QFGHAGVGSSAASGSGPGGAGYGDI 91          
The following BLAST results are available for this feature:
BLAST of NO10G03740 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM25569.15.900e-9385.15chaperone protein [Nannochloropsis gaditana][more]
CBN78567.14.200e-2233.82Heat shock protein 40 like protein/ DnaJ domain co... [more]
XP_002902795.13.000e-1239.66conserved hypothetical protein [Phytophthora infes... [more]
WP_007858402.13.900e-1233.33hypothetical protein [[Clostridium] citroniae] >EH... [more]
ETK71628.13.900e-1239.66hypothetical protein L915_21157 [Phytophthora para... [more]
ETL78282.13.900e-1239.66hypothetical protein L917_20889 [Phytophthora para... [more]
XP_024573649.11.500e-1139.13chaperone protein [Plasmopara halstedii] >CEG37280... [more]
XP_014662301.12.500e-1131.98PREDICTED: dnaJ homolog subfamily C member 30-like... [more]
XP_008608747.14.300e-1138.05hypothetical protein SDRG_04838 [Saprolegnia dicli... [more]
WP_010933150.15.600e-1144.44molecular chaperone DnaJ [Chlorobaculum tepidum] >... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL052nonsL052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR004ncniR004Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR016ngnoR016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001229NSK001229Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO10G03740.1NO10G03740.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100463g2gene4937Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO10G03740.1NO10G03740.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO10G03740 ID=NO10G03740|Name=NO10G03740|organism=Nannochloropsis oceanica|type=gene|length=1155bp
ATGAAGGACTACTACGTCATCCTCCAAGTGTCCCGgtacgtgtatcatgc
cctccctccacctctacctccatcacgcactgttctctctccttcatccc
ttattccaccttcgatctctctcttctctctctccttcgctctcccatta
cattttccttctttattcttcacccatatctctatccttttctccttccc
tctgttcacctctccttaacatagGTCAGCCAGCATTCAGGACATTAAGG
TAGCCTACAAGAACTTCGCACTTAGACTCCATCCAGACGTGACGGgtagg
gcaaggagacggagggggctaggggaggggaggagtgagaagtgaaatgg
ttcgtacattggacttcagcgcgctgagtgccacagtgcccaaccactat
ttcttactcttacccttctcaccctcctcttcctcccacccttcctttcc
tcctaccctctaccaaagGCAACAACGAGGATAAAACTCGCATCTTCAAG
CAGCTCACCGAAGCCTATAACATCCTTTCCGACCAAGATGCTCGCCGGAA
GTATGACTCCAAATTAGGAATCTCCCGTGTCTCCTCCTTCTACAGCCCAG
GCGTTGGGAAGGAGGGAGGAAATCAAGGCGATATACGCGCGCCCCGGCCA
CCACCGGATTTCAAGATCTTCGATCACGATGAGTGGAATGCTTGGCATTA
TGGGGAGGGGGAGGGGGTGAATAAGGAGCCATTTGTCAAGAGgtgaggaa
agaagggagggagttgaggatgggagggggaggctagacgtgtccatttc
aaatgcttggtgaacaagatgttgcctagcctatttgcctacagcactca
atgacccactggatcagtctcctttgtttgacttcatctttttcccatga
cccaactcgcttcctctctcgctcagACGCAATCCGTTCATGGACATCCG
CCCCGACGAGAAGGGTGCGCAGTTCTTCATCCGTCAAAAAACAAAGGAAG
TTCAAGGCGTGGTTGACCAAAGCTATAAAAAAGGGAAGGCCGAAAGAGAT
CTGATCGTCGAGAGGATGAATGCCCGCCGGGCGGCGAGAATGGCAGGAAA
GGTGTATAAGAGTGATAGCGCCAGCGCGGGTGGAAGCTCGTGTACGATTT
CATGA
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protein sequence of NO10G03740.1

>NO10G03740.1-protein ID=NO10G03740.1-protein|Name=NO10G03740.1|organism=Nannochloropsis oceanica|type=polypeptide|length=203bp
MKDYYVILQVSRSASIQDIKVAYKNFALRLHPDVTGNNEDKTRIFKQLTE
AYNILSDQDARRKYDSKLGISRVSSFYSPGVGKEGGNQGDIRAPRPPPDF
KIFDHDEWNAWHYGEGEGVNKEPFVKRRNPFMDIRPDEKGAQFFIRQKTK
EVQGVVDQSYKKGKAERDLIVERMNARRAARMAGKVYKSDSASAGGSSCT
IS*
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Synonyms
Publications