NO10G03740, NO10G03740 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO10G03740 vs. NCBI_GenBank
Match: EWM25569.1 (chaperone protein [Nannochloropsis gaditana]) HSP 1 Score: 349.7 bits (896), Expect = 5.900e-93 Identity = 172/202 (85.15%), Postives = 186/202 (92.08%), Query Frame = 0 Query: 1 MKDYYVILQVSRSASIQDIKVAYKNFALRLHPDVTGNNEDKTRIFKQLTEAYNILSDQDARRKYDSKLGISRVSSFYSPGVGKEGGNQGDIRAPRPPPDFKIFDHDEWNAWHYGEGEGVNKEPFVKRRNPFMDIRPDEKGAQFFIRQKTKEVQGVVDQSYKKGKAERDLIVERMNARRAARMAGKVYKSDSASAGGSSCTIS 203 MKDYYVILQVSRSA++Q+IKVAYKNFAL+LHPDVTGNNEDKTRIFKQLTEAYNILSDQDAR+KYDSKLGISRVS+FY PG G G +GDIRAPRPPPDFKIFDHDEWNAWHYGEGEGV+KEPFVKRRNPFMDIRPD KGAQFF+RQKTKE Q V+DQSYK+GKAE+DLIVERM ARRAARMA + Y DSASAGG SC I+ Sbjct: 1 MKDYYVILQVSRSATLQEIKVAYKNFALKLHPDVTGNNEDKTRIFKQLTEAYNILSDQDARQKYDSKLGISRVSTFYRPG-GSHPGGEGDIRAPRPPPDFKIFDHDEWNAWHYGEGEGVHKEPFVKRRNPFMDIRPDNKGAQFFVRQKTKETQSVIDQSYKRGKAEKDLIVERMKARRAARMANRGYNEDSASAGG-SCVIA 200
BLAST of NO10G03740 vs. NCBI_GenBank
Match: CBN78567.1 (Heat shock protein 40 like protein/ DnaJ domain containing protein [Ectocarpus siliculosus]) HSP 1 Score: 114.4 bits (285), Expect = 4.200e-22 Identity = 70/207 (33.82%), Postives = 115/207 (55.56%), Query Frame = 0 Query: 1 MKDYYVILQVSRSASIQDIKVAYKNFALRLHPDVTGNNEDKTRIFKQLTEAYNILSDQDARRKYDSKLGISRVSSFYS--PGVGKEGGNQGDIRAPRPPPDFKIFDHDEWNAWHYGEGEGVNKEPFVKRRNPFMDIRPDEKGAQFFIRQKTKEVQGVVDQSYK-KGKAERDLIVERMNARRAARMAGKVYK--SDSASAGGSSCTIS 203 M+DYY IL+V+R+A+ +IK AY+ AL +HPDV ++ FK +EAY++L+D + RR YD LG+ +V+S + K+ Q + +PPP KI + EW AWHYG + V KE FV+ N ++D+ + A F ++K ++ V + +K +R ++ER+ RR R+ + ++ +A C+IS Sbjct: 1 MRDYYAILRVARTATNSEIKAAYRQIALAVHPDVNKGDKGSEDEFKDASEAYSVLADTEQRRIYDRTLGVRKVNSSSTRWADAAKKTKAQQPLYTAKPPPGMKIHNEGEWKAWHYGV-DAVQKEAFVQEAN-WLDLEGNRHQAYFRRQEKKEKAMYGVGRGHKFNASRQRHDVIERVRLRREERLKRDRSRRPAEDNAAADDVCSIS 205
BLAST of NO10G03740 vs. NCBI_GenBank
Match: XP_002902795.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY55965.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 81.6 bits (200), Expect = 3.000e-12 Identity = 46/116 (39.66%), Postives = 67/116 (57.76%), Query Frame = 0 Query: 3 DYYVILQVSRSASIQDIKVAYKNFALRLHPDVTGNNEDKTRIFKQLTEAYNILSDQDARRKYDSKLGISRVSSFYSPGVGKE----GGNQGDIRAPRPPPDFKIFDHDEWNAWHYG 115 DYY +L V+R++S ++IK AY A LHPDVTGN+E K FK ++EA+++LSD RR+YD+ S+ + G + G D+RA RP + + W A+HYG Sbjct: 5 DYYRVLNVARTSSFKEIKTAYFGLAKSLHPDVTGNDESKAERFKHVSEAHSVLSDPQKRREYDASRPAESFRSYDTSGTTQHPYVATGGAPDLRA-RP---LYGINEEIWLAYHYG 116
BLAST of NO10G03740 vs. NCBI_GenBank
Match: WP_007858402.1 (hypothetical protein [[Clostridium] citroniae] >EHF01051.1 hypothetical protein HMPREF9469_00283 [ [[Clostridium] citroniae WAL-17108]) HSP 1 Score: 81.3 bits (199), Expect = 3.900e-12 Identity = 50/150 (33.33%), Postives = 80/150 (53.33%), Query Frame = 0 Query: 1 MKDYYVILQVSRSASIQDIKVAYKNFALRLHPDVTGNNEDKTRIFKQLTEAYNILSDQDARRKYDSKLGISRVSSFYSPGVGKEGGNQGDIRAPRPPPDFKIFDHDEWNAWHYGEGEGVNKEPFVKRRNPFMDIRPDEKGAQFFIRQKTK 151 MKDYY IL VS A+ ++IK AY+ A + HPDV ++ +KT+ ++ EAY L D+ +R++YD K + S + + E N+ + + +P PD F + + + G+G + + R P I+P+E A FF RQ K Sbjct: 1 MKDYYRILGVSEQAAEKEIKAAYRKLAKQYHPDVVQDDAEKTQRMYEIQEAYECLGDEKSRKEYD-KARMRNCSGYQAGKQRSENTNEREEKNGQPAPDMSQF--ERFFGFQPGKGMETYQGKKGEARKPDGPIKPEEMFAAFFGRQNHK 147
BLAST of NO10G03740 vs. NCBI_GenBank
Match: ETK71628.1 (hypothetical protein L915_21157 [Phytophthora parasitica] >ETL25063.1 hypothetical protein L916_21032 [Phytophthora parasitica] >ETM31543.1 hypothetical protein L914_20902 [Phytophthora parasitica] >ETP29192.1 hypothetical protein F442_21623 [Phytophthora parasitica P10297]) HSP 1 Score: 81.3 bits (199), Expect = 3.900e-12 Identity = 46/116 (39.66%), Postives = 67/116 (57.76%), Query Frame = 0 Query: 3 DYYVILQVSRSASIQDIKVAYKNFALRLHPDVTGNNEDKTRIFKQLTEAYNILSDQDARRKYDSKLGISRVSSFYSPGVGKE----GGNQGDIRAPRPPPDFKIFDHDEWNAWHYG 115 DYY +L V+R+AS ++IK AY A LHPDVTGN+E K FK ++EA+++LSD RR+YD+ ++ + G+ + G D+RA RP + + W A HYG Sbjct: 5 DYYRVLNVARTASFKEIKAAYFQLAKSLHPDVTGNDESKAERFKHVSEAHSVLSDPQKRREYDASRPAESFRTYDTSGMSQHPYAATGGAPDLRA-RP---LYGINEEIWLAHHYG 116
BLAST of NO10G03740 vs. NCBI_GenBank
Match: ETL78282.1 (hypothetical protein L917_20889 [Phytophthora parasitica] >KUF75681.1 Chaperone protein DnaJ [Phytophthora nicotianae] >KUF99605.1 RAC-beta serine/threonine-protein kinase [Phytophthora nicotianae]) HSP 1 Score: 81.3 bits (199), Expect = 3.900e-12 Identity = 46/116 (39.66%), Postives = 67/116 (57.76%), Query Frame = 0 Query: 3 DYYVILQVSRSASIQDIKVAYKNFALRLHPDVTGNNEDKTRIFKQLTEAYNILSDQDARRKYDSKLGISRVSSFYSPGVGKE----GGNQGDIRAPRPPPDFKIFDHDEWNAWHYG 115 DYY +L V+R+AS ++IK AY A LHPDVTGN+E K FK ++EA+++LSD RR+YD+ ++ + G+ + G D+RA RP + + W A HYG Sbjct: 5 DYYRVLNVARTASFKEIKAAYFQLAKSLHPDVTGNDESKAERFKHVSEAHSVLSDPQKRREYDASRPAESFRTYDTSGMSQHPYAATGGAPDLRA-RP---LYGINEEIWLAHHYG 116
BLAST of NO10G03740 vs. NCBI_GenBank
Match: XP_024573649.1 (chaperone protein [Plasmopara halstedii] >CEG37280.1 chaperone protein [Plasmopara halstedii]) HSP 1 Score: 79.3 bits (194), Expect = 1.500e-11 Identity = 45/115 (39.13%), Postives = 67/115 (58.26%), Query Frame = 0 Query: 3 DYYVILQVSRSASIQDIKVAYKNFALRLHPDVTGNNEDKTRIFKQLTEAYNILSDQDARRKYDSKLGISRVSSFYSPGVGKEG-GNQGDIRAPRPPPDFKIFDHDEWNAWHYGEG 117 DYY +L V+R+AS ++IK AY A LHPDVTGN+ K F+ ++EA+++LS+ RR+YD+ + S + G+ + GD R P + I D + W A HYG+G Sbjct: 5 DYYRVLNVARTASSKEIKAAYFQLAKSLHPDVTGNDVSKAERFRYVSEAHSVLSNPQKRREYDTSRPANSFRSCDTSGMTQHPYATMGDGSDLRARPLYGI-DEEVWLAHHYGQG 118
BLAST of NO10G03740 vs. NCBI_GenBank
Match: XP_014662301.1 (PREDICTED: dnaJ homolog subfamily C member 30-like [Priapulus caudatus]) HSP 1 Score: 78.6 bits (192), Expect = 2.500e-11 Identity = 55/172 (31.98%), Postives = 89/172 (51.74%), Query Frame = 0 Query: 2 KDYYVILQVSRSASIQDIKVAYKNFALRLHPDVTGNNEDKTRIFKQLTEAYNILSDQDARRKYDSKLGISRVSSFYS-------------PGVGKEGGNQGDIR-APRPPPDFKIFDHDEWNAWHYGEGEGVNKEPFVKRR---NPFMDIRPDEKGAQFFIRQKTKEVQGVV 157 KDYY IL ++R A+ IK A+ + + + HPDV+ ++ + + Q+TEAY++L + RRKYDS G+ S FYS PG + ++G R + P +I+D DE++ HY G +N+E KRR D+R D FI +++ + G++ Sbjct: 53 KDYYSILGITRHATQTQIKNAFYDLSKKYHPDVSRDDPNAHAYYTQITEAYDVLGNYHMRRKYDS--GVDTSSGFYSRKTGPTWQKDYPRPGTSSKWTHEGPTRPSGMPHGSTRIYDFDEFHRAHY--GGTINREQQRKRRTRDKSQFDMRQD------FITRRSMIITGLI 214
BLAST of NO10G03740 vs. NCBI_GenBank
Match: XP_008608747.1 (hypothetical protein SDRG_04838 [Saprolegnia diclina VS20] >EQC37814.1 hypothetical protein SDRG_04838 [Saprolegnia diclina VS20]) HSP 1 Score: 77.8 bits (190), Expect = 4.300e-11 Identity = 43/113 (38.05%), Postives = 64/113 (56.64%), Query Frame = 0 Query: 3 DYYVILQVSRSASIQDIKVAYKNFALRLHPDVTGNNEDKTRIFKQLTEAYNILSDQDARRKYDSKLGI-SRVSSFYSPGVGKEGGNQGDIRAPRPPPDFKIFDHDEWNAWHYG 115 DYY ++ ++R+A+ +DIK AY A +LHPDV GN+ +K +FK+++EA ++LSD R +YD++ R + YSP Q RA P + D W A HYG Sbjct: 17 DYYRVMNLTRNATQKDIKRAYLKLARQLHPDVNGNDLEKAALFKKVSEANSVLSDPAKRAEYDNRFSYRDRGETHYSP------KGQTSARASAPRGSHYGINEDVWYAHHYG 123
BLAST of NO10G03740 vs. NCBI_GenBank
Match: WP_010933150.1 (molecular chaperone DnaJ [Chlorobaculum tepidum] >NP_662369.1 molecular chaperone DnaJ [Chlorobaculum tepidum TLS] >Q8KCD8.1 RecName: Full=Chaperone protein DnaJ >AAM72711.1 dnaJ protein [Chlorobaculum tepidum TLS]) HSP 1 Score: 77.4 bits (189), Expect = 5.600e-11 Identity = 40/90 (44.44%), Postives = 56/90 (62.22%), Query Frame = 0 Query: 2 KDYYVILQVSRSASIQDIKVAYKNFALRLHPDVTGNNEDKTRIFKQLTEAYNILSDQDARRKYDSKLGISRVSSFYSPGVGKEGGNQGDI 92 +DYY IL V+RSA +IK AY+ AL+ HPD +N++ FK++ EAY +LS+ D RR+YD + G + V S + G G G GDI Sbjct: 3 RDYYEILGVARSADKDEIKKAYRKLALKYHPDKNPDNKEAEEKFKEVNEAYEVLSNDDKRRRYD-QFGHAGVGSSAASGSGPGGAGYGDI 91 The following BLAST results are available for this feature:
BLAST of NO10G03740 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO10G03740 ID=NO10G03740|Name=NO10G03740|organism=Nannochloropsis oceanica|type=gene|length=1155bpback to top protein sequence of NO10G03740.1 >NO10G03740.1-protein ID=NO10G03740.1-protein|Name=NO10G03740.1|organism=Nannochloropsis oceanica|type=polypeptide|length=203bpback to top Synonyms
Publications
|