NO10G03680, NO10G03680 (gene) Nannochloropsis oceanica

Overview
NameNO10G03680
Unique NameNO10G03680
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1813
Alignment locationchr10:1063581..1065393 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:1063581..1065393 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO10G03680 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL052nonsL052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR004ncniR004Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR016ngnoR016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO10G03680.1NO10G03680.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|585544gene_3843Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO10G03680.1NO10G03680.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO10G03680 ID=NO10G03680|Name=NO10G03680|organism=Nannochloropsis oceanica|type=gene|length=1813bp
ATAAAAGCCTCTAAAAAGCAAAAAGCAAATGAAGCACACCCATATGAACC
TTTACCAAGCCTTGCCGAGGCCCATGGGCACTGTCTAGAGTGAGAAAGGG
TCCGACATCGCATCTGTCTGTGGCCATCCACGTGTCGGCGCAGATTTTTG
GGGCAACGCAAAGTGGCCCATCGTTCCCCCCTACCACCCATTGGCCCATA
ATGCAACCACAAATCAAATTAATACACACTTATCACGCATATGTTTGCAT
ATGAAAAGCTCCTCGCCACCGCCTTGTTACTCACCAAGGCACAAACAAAG
ACGCAGCGTCGTTGTGATGGGGCCTGTTCAGGCCCAGGGGCTCTGTTTGG
TCAGTGGGAAGTCTCCAAAATGCTGACAGAAAGACGACGCCGCCTTTTGA
GGTTACTTACTGTAGCCTTACTCATCCATCCTCGAGGGCGAGGGCACCGA
CACCAAGACCGAAAGCGTCCCAGGACGTTGCAAGAGGTCTTTGACGTGTT
TTCTGACGACATTTTCCTGAAGCTGCACCGATTTACCAAGGAGCAAAAGC
TCTACATAATTCCCAGGCTCCACCTCGAGGTCACCGCCCAAGTCAAAGGg
taagcacgcgggcgcatttagtgcatggcttcctctcacatgcccctgtt
tgaggtcgaggaggaggcaacacggtgtaaattgaccccttgcactctct
caatgccctcgcccccactttcccacagGATGAGCATAATGCCTTCATCG
ATCGTGTTCGTCATGCTCCTCGGCCACCTTGCGCACCTTCACTCTGTATC
TGGGACCATGGAGCACGTGTACGGCTACGATCGCACACAAATCACTAAGT
GGACCAACAGCATGCTTGAGTATTTGTTCAACGTTGGAACTGAACGAAAC
GCGCCTAGCAGAGAAGATGAACGAGAACTGCTACTTGATGGGCACGGTAT
TAACACCTGCCGCTCCAGGAGAGAGTAACGCCTACCTTGCAATCGATGGg
tgagcatttaaggccttttctatacaccacttcaagaacaccgtctttct
ggggcctcccgtaaaaataattcattgatccactcctcttcactcactta
ccacggcagGAGAGTTTCTTAGCCTTCCTGCTACCAGGAACGGTACTACA
ACGCCAAGTACCACTATCATGGGATTAATTTACAGGGGATGGTGTCCCCC
GTAGGCATACTCGAGTCAGTCTTTGGCCCTCTTCCTGGTATCCGTAACGA
CGCCGCCATGTGGTCTCTCGCCCGGGATTATAGTCCAATGGATCGCATCA
GTACCGCGATCGGGCGGCACTGCTTTGCCCTGTATGACCCGGCTTACAGT
GGTCACAATATGCAAAATTATATTGCCACGTCCTTCTCCCGCTTTCAACA
GGGGGACTGACAAGAGAGAAAACCGCCCACCATGGAAGCTGGAGCGGCAG
GTGTTAATACCGTGCCCATCAAGTAGCAGTACTCGTTCATCTTCTCTGCG
AGGCGCGTTTCGTTCAGTTTTTTTTGTCGATGTGTGTTCGATGCTTTTTG
AGGGGTTGGGAAGCAGAGCAAAACCCTGTAAAAAGCGAAAGGTACAAGAA
ACACACCCATCTGCACCTTTACGAAAAGGGAGGGAAGAATCGCTTTTTCA
GGGGTTGCGAAAACAGCCCCAAATATTGTAATACATGCCTCATAAACTAT
GAAACCATGATGCTGTACATGAAAAAGTCCCCTTTCCATGGATAAGTAAA
GGCACATTCAAAACGAAAGGAGAAATGGATCCTCAAAGTCTTTGCTTGTG
CGGCGGAAGACTG
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protein sequence of NO10G03680.1

>NO10G03680.1-protein ID=NO10G03680.1-protein|Name=NO10G03680.1|organism=Nannochloropsis oceanica|type=polypeptide|length=203bp
MFAYEKLLATALLLTKAQTKTQRRCDGACSGPGALFGQWEVSKMLTERRR
RLLRLLTVALLIHPRGRGHRHQDRKRPRTLQEVFDVFSDDIFLKLHRFTK
EQKLYIIPRLHLEVTAQVKGMSIMPSSIVFVMLLGHLAHLHSVSGTMEHV
YGYDRTQITKWTNSMLEYLFNVGTERNAPSREDERELLLDGHGINTCRSR
RE*
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Synonyms
Publications