NO10G03380, NO10G03380 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO10G03380 vs. NCBI_GenBank
Match: EWM25556.1 (peptide methionine sulfoxide reductase [Nannochloropsis gaditana]) HSP 1 Score: 292.0 bits (746), Expect = 2.000e-75 Identity = 141/219 (64.38%), Postives = 164/219 (74.89%), Query Frame = 0 Query: 55 NQPTRRGFLGKWLGGIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKSGMGIDLTPLSTTDALKAADELKLGRMERRILFEAGTEMPGTGVTANGFKGSTKEDGVWVSAVSGVPLFDSQAKYNSGTGWPSFFQAADPAHVIERLDPKD-GGKPRFLQRVEVLDRKSGTHLGHVFDDGPAPTGKRYCMNAGALRFIPRGEVEGWVAKLPKSK 273 N+PTRR + KWLGG+G P+S MG+DLTPLST +ALKAAD+LKL + ERRILFEAGTEMPG+G+TANG K S+K DG+WVSA+SGVPLFD++AKYNSGTGWPSF Q DPAHVIER+DP+D GKP+FL RVEVLDRKSGTHLGHVFDDGPAPTGKRYCMNA A+RF+PR EV+GW+A LPK+K Sbjct: 68 NEPTRRAVIAKWLGGVG----LSVAATAALGTLFFPRRPLETQAAEMSAPAATPRSSMGLDLTPLSTNEALKAADKLKLSKQERRILFEAGTEMPGSGMTANGVKYSSKADGLWVSALSGVPLFDAKAKYNSGTGWPSFTQVVDPAHVIERVDPRDVDGKPQFLWRVEVLDRKSGTHLGHVFDDGPAPTGKRYCMNAAAMRFVPREEVDGWMASLPKAK 282
BLAST of NO10G03380 vs. NCBI_GenBank
Match: XP_005855531.1 (methionine sulfoxide reductase b, partial [Nannochloropsis gaditana CCMP526] >EKU20825.1 methionine sulfoxide reductase b, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 246.1 bits (627), Expect = 1.200e-61 Identity = 115/143 (80.42%), Postives = 130/143 (90.91%), Query Frame = 0 Query: 112 MGIDLTPLSTTDALKAADELKLGRMERRILFEAGTEMPGTGVTANGFKGSTKEDGVWVSAVSGVPLFDSQAKYNSGTGWPSFFQAADPAHVIERLDPKD-GGKPRFLQRVEVLDRKSGTHLGHVFDDGPAPTGKRYCMNAGAL 254 MG+DLTPLST +ALKAAD+LKL + ERRILFEAGTEMPG+G+TANG K S+K DG+WVSA+SGVPLFD++AKYNSGTGWPSF Q DPAHVIER+DP+D GKP+FL RVEVLDRKSGTHLGHVFDDGPAPTGKRYCMNA A+ Sbjct: 1 MGLDLTPLSTNEALKAADKLKLSKQERRILFEAGTEMPGSGMTANGIKYSSKADGLWVSALSGVPLFDAKAKYNSGTGWPSFTQVVDPAHVIERVDPRDVDGKPQFLWRVEVLDRKSGTHLGHVFDDGPAPTGKRYCMNAAAM 143
BLAST of NO10G03380 vs. NCBI_GenBank
Match: CBJ27561.1 (Methionine-R-sulfoxide reductase [Ectocarpus siliculosus]) HSP 1 Score: 197.2 bits (500), Expect = 6.600e-47 Identity = 94/154 (61.04%), Postives = 111/154 (72.08%), Query Frame = 0 Query: 108 PKSGMGIDLTPLSTTDALKAADELKLGRMERRILFEAGTEMPGTGVTANGFKGSTKEDGVWVSAVSGVPLFDSQAKYNSGTGWPSFFQAADPAHVIERLDPKDGGK-PRFLQRVEVLDRKSGTHLGHVFDDGPAPTGKRYCMNAGALRFIPRGE 261 P S G DL PL+ + D KL +++ +L +AGTE P G T NG+ G K +G WVSAVSGVPLF S KY+SGTGWPSF+ DP HVIER+DPKD P+FLQRVEVLDRKSGTHLGHVF+DGP PTGKRYCMNA ++ FIP+ E Sbjct: 86 PFSKSGYDLDPLTAEEVDARVD--KLTELQKVVLTQAGTERPFQGKTVNGYNGGIKAEGTWVSAVSGVPLFSSDTKYDSGTGWPSFYAPIDPEHVIERVDPKDAASMPKFLQRVEVLDRKSGTHLGHVFNDGPKPTGKRYCMNAASMAFIPKEE 237
BLAST of NO10G03380 vs. NCBI_GenBank
Match: CEM29185.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 172.9 bits (437), Expect = 1.300e-39 Identity = 84/153 (54.90%), Postives = 104/153 (67.97%), Query Frame = 0 Query: 110 SGMGIDLTPLSTTDALKAADELKLGRMERRILFEAGTEMPGTGVTANGFKGSTKEDGVWVSAVSGVPLFDSQAKYNSGTGWPSFFQAADPAHVIERLDPKDGGKPRFLQRVEVLDRKSGTHLGHVFDDGPAPTGKRYCMNAGALRFIPRGEVE 263 S G D+TP++ + KAA L + + I +AGTEM TG T NG+K +TKE G+WV A+SG+PLF S KY+SGTGW SF + DP HVIER DPKD F +R EVLD KSG HLGHVFDDGP P KRYCMNA +++F+P V+ Sbjct: 77 SKSGYDVTPMTDEEVQKAAQGLTSKQYD--INLKAGTEMAFTGETVNGYKWNTKEKGMWVGAISGLPLFSSDDKYDSGTGWLSFLKPVDPMHVIERKDPKDMAFGPFERRTEVLDAKSGAHLGHVFDDGPPPLKKRYCMNAASMKFVPAEPVK 227
BLAST of NO10G03380 vs. NCBI_GenBank
Match: XP_005652026.1 (methionine-R-sulfoxide reductase [Coccomyxa subellipsoidea C-169] >EIE27482.1 methionine-R-sulfoxide reductase [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 171.4 bits (433), Expect = 3.900e-39 Identity = 84/151 (55.63%), Postives = 102/151 (67.55%), Query Frame = 0 Query: 110 SGMGIDLTPLSTTDALKAADELKLGRMERRILFEAGTEMPGTGVTANGFKGSTKEDGVWVSAVSGVPLFDSQAKYNSGTGWPSFFQAADPAHVIERLDPKDGGKPRFLQRVEVLDRKSGTHLGHVFDDGPAPTGKRYCMNAGALRFIPRGE 261 S +G D+TPL T + K+ R I EAGTE TG T NG+ K++GVWVSA+ G+PLF S K++SGTGWPSF+ DP HVIE KD P F+ R EV+D +SG HLGHVF+DGP PTGKRYCMNAGAL+FIP+GE Sbjct: 66 SKLGYDITPL--TQGKLKEEAAKVDANTRYIALEAGTERAFTGKTINGYSHDNKKEGVWVSAIGGLPLFSSDTKFDSGTGWPSFYAPIDPEHVIE---VKDSSIP-FMPRTEVIDARSGAHLGHVFNDGPRPTGKRYCMNAGALKFIPKGE 210
BLAST of NO10G03380 vs. NCBI_GenBank
Match: KXZ44249.1 (hypothetical protein GPECTOR_70g480 [Gonium pectorale]) HSP 1 Score: 169.1 bits (427), Expect = 1.900e-38 Identity = 85/151 (56.29%), Postives = 102/151 (67.55%), Query Frame = 0 Query: 110 SGMGIDLTPLSTTDALKAADELKLGRMERRILFEAGTEMPGTGVTANGFKGSTKEDGVWVSAVSGVPLFDSQAKYNSGTGWPSFFQAADPAHVIERLDPKDGGKPRFLQRVEVLDRKSGTHLGHVFDDGPAPTGKRYCMNAGALRFIPRGE 261 S G D+TPLS +A +AA L ++ + EAGTE TG T NG+ K+ GV+VSAV G+PLF S K+NSGTGWPSFF DP H+IE D ++ RVEVLD +SG HLGHVFDDGPAPTGKRYC+NA AL+FIP GE Sbjct: 36 SRSGYDVTPLS--EAERAAAAQGLTSFQQHVTMEAGTERAFTGKTVNGYSHDNKQRGVYVSAVGGLPLFTSDTKFNSGTGWPSFFAPVDPDHIIEVTD----YSIPYMPRVEVLDARSGAHLGHVFDDGPAPTGKRYCINAAALKFIPAGE 180
BLAST of NO10G03380 vs. NCBI_GenBank
Match: OLQ14971.1 (Peptide methionine sulfoxide reductase MsrB [Symbiodinium microadriaticum]) HSP 1 Score: 166.4 bits (420), Expect = 1.200e-37 Identity = 82/157 (52.23%), Postives = 103/157 (65.61%), Query Frame = 0 Query: 108 PKSGMGIDLTPLSTTDALKAADELKLGRMERRILFEAGTEMPGTGVTANGFKGSTKEDGVWVSAVSGVPLFDSQAKYNSGTGWPSFFQAADPAHVIERLDPKD-GGKPRFLQRVEVLDRKSGTHLGHVFDDGPAPTGKRYCMNAGALRFIPRGEVEG 264 P++ +++ + T+A K+ L + E+R+L EA TE TG T NGF KE+G +VS +SG PLF S+AKYNSGTGWPSF+ V+ER DP D P+ R EVLDR SGTHLGHVFDDGP PTGKRYC+NA AL+F+P EG Sbjct: 54 PRARAVEEMSDAAVTEAAKS-----LSKFEQRVLLEAATEPAFTGKTTNGFAWDNKEEGTYVSPISGEPLFSSKAKYNSGTGWPSFWAPVSSDTVLERTDPGDMDNLPKMFWRTEVLDRASGTHLGHVFDDGPPPTGKRYCINAAALKFVPGTAPEG 205
BLAST of NO10G03380 vs. NCBI_GenBank
Match: XP_002957178.1 (hypothetical protein VOLCADRAFT_121603 [Volvox carteri f. nagariensis] >EFJ41676.1 hypothetical protein VOLCADRAFT_121603 [Volvox carteri f. nagariensis]) HSP 1 Score: 164.5 bits (415), Expect = 4.700e-37 Identity = 82/151 (54.30%), Postives = 101/151 (66.89%), Query Frame = 0 Query: 110 SGMGIDLTPLSTTDALKAADELKLGRMERRILFEAGTEMPGTGVTANGFKGSTKEDGVWVSAVSGVPLFDSQAKYNSGTGWPSFFQAADPAHVIERLDPKDGGKPRFLQRVEVLDRKSGTHLGHVFDDGPAPTGKRYCMNAGALRFIPRGE 261 S G D+TPLS + AA+ L ++ + E GTE TG T NG+ K+ GV+VSA+ G+PLF S K+NSGTGWPSFF DP H+IE D P ++ R+EVLD +SG HLGHVFDDGPAPTGKRYC+NA AL+FIP GE Sbjct: 78 SRSGYDVTPLSDEERRAAAEGLT--PFQKHVTLEHGTERAFTGSTVNGYSHDNKQRGVYVSALGGLPLFSSDTKFNSGTGWPSFFAPLDPDHIIE---VPDYSIP-YMPRIEVLDARSGAHLGHVFDDGPAPTGKRYCINAAALKFIPAGE 222
BLAST of NO10G03380 vs. NCBI_GenBank
Match: PNW85637.1 (hypothetical protein CHLRE_03g195850v5 [Chlamydomonas reinhardtii]) HSP 1 Score: 164.1 bits (414), Expect = 6.200e-37 Identity = 79/151 (52.32%), Postives = 101/151 (66.89%), Query Frame = 0 Query: 110 SGMGIDLTPLSTTDALKAADELKLGRMERRILFEAGTEMPGTGVTANGFKGSTKEDGVWVSAVSGVPLFDSQAKYNSGTGWPSFFQAADPAHVIERLDPKDGGKPRFLQRVEVLDRKSGTHLGHVFDDGPAPTGKRYCMNAGALRFIPRGE 261 S G D+TPL+ + +AA+ L ++ + E GTE TG T NG+ K+ G +V A+ G+PLF S K+NSGTGWPSFF DPAH++E +D ++ RVEVLD +SG HLGHVFDDGPAPTGKRYC+NA AL+FIP GE Sbjct: 80 SRAGYDVTPLTAEERQRAAEGLT--DFQKYVTLEHGTERAFTGKTVNGYTHDNKQRGTYVCALGGLPLFSSDTKFNSGTGWPSFFAPIDPAHIVEVVDM----SIPYMPRVEVLDARSGAHLGHVFDDGPAPTGKRYCINAAALKFIPAGE 224
BLAST of NO10G03380 vs. NCBI_GenBank
Match: PRW60826.1 (methionine sulfoxide reductase B [Chlorella sorokiniana]) HSP 1 Score: 162.5 bits (410), Expect = 1.800e-36 Identity = 82/151 (54.30%), Postives = 98/151 (64.90%), Query Frame = 0 Query: 110 SGMGIDLTPLSTTDALKAADELKLGRMERRILFEAGTEMPGTGVTANGFKGSTKEDGVWVSAVSGVPLFDSQAKYNSGTGWPSFFQAADPAHVIERLDPKDGGKPRFLQRVEVLDRKSGTHLGHVFDDGPAPTGKRYCMNAGALRFIPRGE 261 S G D+TPL+T + + AA L +R + +AGTE TG T +G K G +VSAV G+PLF S+ KY+SGTGWPSFF+ DP HVIE D F+ RVEVL +SG HLGHVF DGP PTG+RYCMNA ALRFIP GE Sbjct: 30 SASGYDITPLTTEERIAAAKPLT--DFQRNVTLQAGTERAFTGKTVDGSPHDNKRKGTYVSAVGGLPLFSSEHKYDSGTGWPSFFKPLDPEHVIEVADT----SIPFMPRVEVLCARSGAHLGHVFTDGPRPTGRRYCMNAAALRFIPEGE 174 The following BLAST results are available for this feature:
BLAST of NO10G03380 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO10G03380 ID=NO10G03380|Name=NO10G03380|organism=Nannochloropsis oceanica|type=gene|length=819bpback to top protein sequence of NO10G03380.1 >NO10G03380.1-protein ID=NO10G03380.1-protein|Name=NO10G03380.1|organism=Nannochloropsis oceanica|type=polypeptide|length=273bpback to top Synonyms
Publications
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