NO10G03360, NO10G03360 (gene) Nannochloropsis oceanica

Overview
NameNO10G03360
Unique NameNO10G03360
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3045
Alignment locationchr10:947727..950771 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:947727..950771 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO10G03360 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL052nonsL052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR004ncniR004Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR015ngnoR015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO10G03360.1NO10G03360.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO10G03360.1NO10G03360.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO10G03360 ID=NO10G03360|Name=NO10G03360|organism=Nannochloropsis oceanica|type=gene|length=3045bp
CTTTGTTTGAGTACGCCACTGGTTGTCATTCGGCAAGATAACCGCCAAGA
CTTTTTATTATCCATATAGCTCTCTTTATCCTCTCCTCTCAAAGTCCCAC
CGCATCCGTCTTTCCCCTTTTCCCCCAGGAGATGGTGAAGTGTGTTTTTG
GGGGTTAACGGCCCTCCTCTAGAATTAAACGGTCGCTTAAACTGCGCGCG
CATACGTTTGCCTTCCCGCCTTCGCGTTTTTGCATCGTTTGGCCCGCACA
CGACGAACCTCCAAAAATCGTTTGAAGGCATCGACTACCATTATGAATAC
TGCATACATCTCATCACTTTCTATGCATTTGTGACTTCTTGCTATGGGAA
TCGCCTTAGAAGTCTCCTCTTCATTCCGGTCCGCGCGCACTCATCACTCG
TAAGAAACGTCTCACACTTTCGAGCCCTTGCATAGGCGCCTTAAAAAAGG
ACTACATCGACGTGGAAAACCACGACGCTCCTTATCTACAGGTATTTCAG
AATCGCAATTATATCAGCCCTGTCTTCGCCGGTTTCCTCTGCCGCAAACC
CGTCGCAGACGCCACCTTCGAGGTAGCGCAATCCTTTAATACCGCCATCC
CCACGACCAGCCATGCGCTCCGCCAACGGAAACCTAGTACGCACTCGTGA
GTGGCATCAAATTAAGTGTTTTCACCAGTATCTGATGGTCCGACCCCACC
AGGCGGAATGGAAAGCTCTGCATCAAAGCAAAGCGCAATGGCTCGCCGAC
ATGTTGCACTACAGCCCCAGCCTCCCCCACGATCGAGCCCTTGACCTCTT
CAACGAGCATTTTGAGCGCATGGAGAACAAGGATCTCTTTCGGATGCGTT
TCAATCGTCGCTCGGCCAACCCTTTAGAGTGGATTTCAGTGGATTTCTTC
AGCAAAGGCCGGGCCTTGGACCCGTCTTTCCTCCGCTTTCTCATGGGGAT
GACCTGGCAGATGAAGACGCCCGCCTTCCGCGCCACAGTGAGCTTGGAGG
AGTTTGTCCGAGATCGGACAGAGAAAGAGGATAAACAAGCTAAGGACACG
TTTCTGCTGGCGCATCGTTTTTTGTATGACAGCTGCCCGCATGGCTTACG
GCTCGAGGTGGCCGGCGCGGGGGAGGGTGCCATAGTGAAGGACGAGGACA
TGAACGCGGATGCCGAAAGGCGTCCTACGGGACAACAGGAGTATCGAATC
ATGGCCCAGTTGAAAGAATGGGAGGACCGCGGTCTTGTAATTGCTTTGGA
GACCAGTCCGACCAAGAAAATCTTCTCACTTGCCCGGGAGGCCCTTGACT
TAATTACCTACGACTCGCCCTTGCTTCCGTCCATCCTACGCGCCATGACG
ACGCAGCGCCCCGAGGCCACGCAGCAGTACCGACGGATTATTGCAAAGGA
AGCCAATAGCCGCACATGCTTTTTCCGCTTACATAAGAACTCCCGTTTCC
TCACCCTCTTTGGCCCACTCAAGCCGGACCTGGCTGCTCTCATTGAAACA
GCGCCTGCGTCTTACTACTCCTCCTCTTCAGCTCCTGCCGCATCTGGTGC
TGCTGATGGTGGCTGCAGCAGGATTTACAGAAGTAGCAATAATAATATTG
CCAAGCAGCCCCGAGCCCGTGGCAGCGTGTACAGGGGATTCAGAAAGCGA
CCTTATGCTGATGCCGTGGAATCGTCAAGCCTGAAAAAGTGTGCTGATGC
AGCTGTAGTCAAGAAGTCTTGCCGTCTCCCCAAGCGCGAAGAAGATGATT
TTTACTACTACGACGATAATGACGACCTAGGTGATACGGAAGGGGAAGGG
GGAGAGGAAGAGGAGACAGCGAAGATGGTGGGAAAGCAGGAACAGCGGAA
GAAGGAGGAGGGGGGAGGGCAGATGAGCTTGGAGATGGCATTGGGGATTA
TCAATGCAGTTCGCCCCTCCAACCATCAGTACCACTATCACACTCAAATA
AGTCAGCACCAACCTTGGGCAATGCCAACAGCGACGATGACGACGGTGAA
GGCAGCTGCGGTGGCTCCTCATTCCCGTTTGCTCTCGCCCGCCGACGACT
TGACTACTTCCTCCTCCTCGTCCTCCGCAGCCTCGTGCTCCATAGAAACT
AATAGCGGAGGACTATCTGCGTGGGCACAAGAACCGTGGATGCGAGAGCT
GGATGATTGCCTGAACCGTTGGTTTCCCCATACCCTCGAAGGAGATGATA
CAACGATGTACGAGCCGCCTGTAGACCCAGACGACGTCTTCGAGAAGTGG
TGCCGAGAGAATCTGGTGGTAGCAGGGGAAGGGATGGCCGGGAATTATAC
AAGCAACAGAGCCAGCAACTGCAGCAGTATCACTAACATTAGCAGTACCA
GCAGCAGCTGTCAAATCGGAGGGAAGGACAACATTGCAGCGACATCATCT
GCGGCGTCTGTGGTGTTGATGGATGAGCATGGAAAAGTCTCCACCGCTAT
CAGCACTGCGCGCTCGACCGCTTTCTCTTCTTTGTCAACGACTGTGGCGA
CGCAAGTGGAGGAAGTGATTGAAGAGAGAGAGATATGTAACGGGGGGGAG
GGGACACAGGGCGGGGATGTTGGAATGCCGCTAATCGAGGAGGAGAAACA
GCAGCATTTTTGCTCGCTCATGCTCGAAGGCTTTCTCGTAACGGGTCCGT
CTAAGTGAATAAATGAGAAGAAGGATGAAGAAGAAAGAGATAAAGAAGAA
GAGGCAAAGGAGGAGGAAATAATAAGAGGGAAAATGAGGAAGAAAGTAAA
ATAATGAGTGGGAGAAAAAAGAGGACCACGAGCACTGGCATCTACCAGGC
CATTGATGAAATCCAAGGATAGAAAAGTAAGGGAGGAAACACAACGTCAA
CAGTAAAGAGAAAGCGGCGATAAATAATCAAGAAGAACGGGCATCAATAA
TTTTTTAAAAACCGGTCTGTATGTACGTGGAGAGAAGTTGACTGTCTCAT
GCAGAAACAAGTAAGTGTAGCGATCAAAGTACTAGTTAGAAAATGGGTTG
CTCTTCCATCAATTCGAGAATTTGCAGCCAGATGCAACGCGATGC
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protein sequence of NO10G03360.1

>NO10G03360.1-protein ID=NO10G03360.1-protein|Name=NO10G03360.1|organism=Nannochloropsis oceanica|type=polypeptide|length=682bp
MRSANGNLVRTREWHQIKCFHQYLMVRPHQAEWKALHQSKAQWLADMLHY
SPSLPHDRALDLFNEHFERMENKDLFRMRFNRRSANPLEWISVDFFSKGR
ALDPSFLRFLMGMTWQMKTPAFRATVSLEEFVRDRTEKEDKQAKDTFLLA
HRFLYDSCPHGLRLEVAGAGEGAIVKDEDMNADAERRPTGQQEYRIMAQL
KEWEDRGLVIALETSPTKKIFSLAREALDLITYDSPLLPSILRAMTTQRP
EATQQYRRIIAKEANSRTCFFRLHKNSRFLTLFGPLKPDLAALIETAPAS
YYSSSSAPAASGAADGGCSRIYRSSNNNIAKQPRARGSVYRGFRKRPYAD
AVESSSLKKCADAAVVKKSCRLPKREEDDFYYYDDNDDLGDTEGEGGEEE
ETAKMVGKQEQRKKEEGGGQMSLEMALGIINAVRPSNHQYHYHTQISQHQ
PWAMPTATMTTVKAAAVAPHSRLLSPADDLTTSSSSSSAASCSIETNSGG
LSAWAQEPWMRELDDCLNRWFPHTLEGDDTTMYEPPVDPDDVFEKWCREN
LVVAGEGMAGNYTSNRASNCSSITNISSTSSSCQIGGKDNIAATSSAASV
VLMDEHGKVSTAISTARSTAFSSLSTTVATQVEEVIEEREICNGGEGTQG
GDVGMPLIEEEKQQHFCSLMLEGFLVTGPSK*
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Synonyms
Publications