NO10G03030, NO10G03030 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO10G03030 vs. NCBI_GenBank
Match: EWM25517.1 (gnat family [Nannochloropsis gaditana]) HSP 1 Score: 263.1 bits (671), Expect = 9.400e-67 Identity = 151/252 (59.92%), Postives = 192/252 (76.19%), Query Frame = 0 Query: 18 SGIKLAHS--LRQSRQSSTTFGRLGLHSSRSRSSSIAT----SASVTSLSPVQAV--TLTQVEIRQATVKDFPAIAESRKAIIFVPKQGGGSGAGAIRRALEEATSKEEREILSKIPYLVTKQAIAFIAVGRPCLSPGGARGSSSSSRPRVVGTVDVFEREAEGSTLPRRLFLKNMIVDEAFRRQGFARRLLSRVEEHARNIGIKEVYLEVLANNEGAIQLYTQQGFQFTSNPMELLWRVLGIGRVTMVKKL 262 + ++L HS LR S + + G +S S S + A+VTS +P ++ TL+Q+EIR+ATV+DFPAIA +RK IIFVPKQGGG+GAG +RRALE A+S+EERE+LSKIPYLVT QAIAFIA+G+P +S GG+ GSS RV+GTVDVFER+ EG +LPRRLFLKNMIVD FRRQG ARRLL+R E+HAR +GIKE++LEVLANNE A LY +QGF++T P++ LWR+L IG+VTM K+L Sbjct: 57 ASLQLQHSTCLRSSLTAIYSASSRGCRASSSTSIKSGSLNIFPAAVTSSAPNLSLPRTLSQIEIRRATVRDFPAIASTRKTIIFVPKQGGGNGAGVVRRALENASSQEEREMLSKIPYLVTGQAIAFIAIGKPKISLGGS-GSS-----RVIGTVDVFERDREGPSLPRRLFLKNMIVDPDFRRQGLARRLLARTEDHAREVGIKEIHLEVLANNEAAKALYEEQGFEYTRGPLDSLWRLLKIGKVTMTKRL 302
BLAST of NO10G03030 vs. NCBI_GenBank
Match: XP_005771311.1 (hypothetical protein EMIHUDRAFT_102363 [Emiliania huxleyi CCMP1516] >EOD18882.1 hypothetical protein EMIHUDRAFT_102363 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 71.2 bits (173), Expect = 5.200e-9 Identity = 54/163 (33.13%), Postives = 80/163 (49.08%), Query Frame = 0 Query: 80 DFPAIAESRKAIIFVPKQGGGSGAGAIRRALEEATSKEEREILSKIPYLVTKQAIAFIAVGRPCLSPGGARGSSSSSRPRVVGTVDVFE------REAEGSTLPRRLFLKNMIVDEAFRRQGFARRLLSRVEEHARNIGIKEVYLEVLANNEGAIQLYTQQGF 237 D A+ RK + FV +QG G + A+ E R + +++ + +A IA + ++ V+GTVD R A G LP+RL ++N+ V EAFRRQG RRL+ EE A + I+ + L+VLA+NE A +LY GF Sbjct: 40 DCEALCCVRKPVEFVVEQGSKGFLGQV--AVLEPEVARRRRVQARLGSAIRDKARVLIA------------ADAGAAELAVIGTVDCVALPAGKGRRAMGPELPQRLLIRNLWVAEAFRRQGIGRRLMDAAEELAAEMHIEFLSLDVLADNEPARRLYESLGF 188
BLAST of NO10G03030 vs. NCBI_GenBank
Match: XP_005771274.1 (hypothetical protein EMIHUDRAFT_102336 [Emiliania huxleyi CCMP1516] >EOD18845.1 hypothetical protein EMIHUDRAFT_102336 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 70.5 bits (171), Expect = 8.900e-9 Identity = 54/163 (33.13%), Postives = 80/163 (49.08%), Query Frame = 0 Query: 80 DFPAIAESRKAIIFVPKQGGGSGAGAIRRALEEATSKEEREILSKIPYLVTKQAIAFIAVGRPCLSPGGARGSSSSSRPRVVGTVDVFE------REAEGSTLPRRLFLKNMIVDEAFRRQGFARRLLSRVEEHARNIGIKEVYLEVLANNEGAIQLYTQQGF 237 D A+ RK + FV +QG G + A+ E R + +++ + +A IA + ++ V+GTVD R A G LP+RL ++N+ V EAFRRQG RRL+ EE A + I+ + L+VLA+NE A +LY GF Sbjct: 40 DCEALCCVRKPVEFVVEQGSKGFLGQV--AVLEPEVARRRRVQARLGSAIRDKARVLIA------------ADAGAAELAVIGTVDCVALPAGKGRRAMGPELPQRLLIRNLWVAEAFRRQGIGRRLMDAAEELAAEMHIEFLSLDVLADNEPARRLYEGLGF 188
BLAST of NO10G03030 vs. NCBI_GenBank
Match: WP_106232941.1 (GNAT family N-acetyltransferase [Pleurocapsa sp. CCALA 161] >PSB12416.1 GNAT family N-acetyltransferase [Pleurocapsa sp. CCALA 161]) HSP 1 Score: 68.2 bits (165), Expect = 4.400e-8 Identity = 36/88 (40.91%), Postives = 55/88 (62.50%), Query Frame = 0 Query: 152 SSSSSRPRVVGTVDVFEREAEGSTLPRRLFLKNMIVDEAFRRQGFARRLLSRVEEHARNIGIKEVYLEVLANNEGAIQLYTQQGFQFT 240 + S+S+P +VGT++V R A ST P+ ++ N+ V + +RR G A +LL+ E+ A + G +E L VL NE A QLY Q G+Q + Sbjct: 86 AQSNSQPLIVGTIEVALRSALWSTSPQYPYISNLAVAQNYRRLGIASQLLTACEQAALDWGYQETQLHVLDRNESAKQLYCQNGYQIS 173
BLAST of NO10G03030 vs. NCBI_GenBank
Match: CBJ25814.1 (acetyltransferase [Ectocarpus siliculosus]) HSP 1 Score: 66.2 bits (160), Expect = 1.700e-7 Identity = 71/257 (27.63%), Postives = 116/257 (45.14%), Query Frame = 0 Query: 27 RQSRQSSTTF----GRLGLHSSRSRSSSIATSASVTSLSPVQAVTLTQVEIRQATVKDFPAIAESRKAIIFVPKQGGGSGAGAIRRALEEATSKEEREILSKIPYLVTKQAIAFIAVGRPCLSPGGARGSSSSSRPRVVGTVDVFEREAEGST-----------LPR--RLFLKNMIVDEAFRRQGFARRLLSRVEEHARNIGIKEVYLEVLANNEGAIQLYTQQGFQFTSNPMEL-------LWRVLGIGRVTMVK 260 R+++ + T F RLG +++ + S+ +S +A +V +R+A D+ +AE R II V G G + +++ E R +++K+ LV+ +++A IA+ R+VGTVD R A + +P+ +FLKN+ V RRQG AR L++ E AR + V L+V N+ A +LY GF+ P + L R LG+G+ MVK Sbjct: 93 RRAKLNKTMFVLKGTRLGANAAAAGGSTEKAGSSKLGKGGQKA----RVTVRRAREPDYQGVAEIRGVIIPVGMSGATGFLGG-KVVIDDPAEAERRLLMAKVADLVSGESVALIAL----------------EGQRIVGTVDCIIRSAAATVDTLGQPKQQPEIPKANEVFLKNLFVLPERRRQGIARELVNGAEVFARQEKARTVCLDVARQNDAARELYLSCGFEEAERPGPIEGGMGGALLRSLGMGKKYMVK 328
BLAST of NO10G03030 vs. NCBI_GenBank
Match: WP_013325120.1 (GNAT family N-acetyltransferase [Cyanothece sp. PCC 7822] >ADN17082.1 GCN5-related N-acetyltransferase [Cyanothece sp. PCC 7822]) HSP 1 Score: 65.5 bits (158), Expect = 2.900e-7 Identity = 35/86 (40.70%), Postives = 52/86 (60.47%), Query Frame = 0 Query: 152 SSSSSRPRVVGTVDVFEREAEGSTLPRRLFLKNMIVDEAFRRQGFARRLLSRVEEHARNIGIKEVYLEVLANNEGAIQLYTQQGFQ 238 +SS+ ++GTV++ R +E ST P ++ N+ V RRQG AR++L + E+ A G KE+YL VL +N A QLY G+Q Sbjct: 93 ASSTEEEEIIGTVEISLR-SEWSTTPNSAYISNLAVSHHCRRQGVARKMLRKCEQIALEWGFKELYLHVLEDNHVAKQLYLNGGYQ 177
BLAST of NO10G03030 vs. NCBI_GenBank
Match: WP_006634463.1 (N-acetyltransferase [Microcoleus vaginatus] >EGK85873.1 GCN5-related N-acetyltransferase [Microcoleus vaginatus FGP-2]) HSP 1 Score: 63.9 bits (154), Expect = 8.300e-7 Identity = 41/115 (35.65%), Postives = 57/115 (49.57%), Query Frame = 0 Query: 148 GARGSSSSSRPRVVGTVDVFEREAEGSTLPRR--LFLKNMIVDEAFRRQGFARRLLSRVEEHARNIGIKEVYLEVLANNEGAIQLYTQQGFQFTSNPMELLWRVLGIGRVTMVKK 261 G + S R+ GTV++ R +P +L N+ V +RRQG A++LLS EE AR G E+YL VL NN A QLY Q G++ R+ G R ++K Sbjct: 88 GTQNYRSHRDQRMAGTVEMALRSRFPWQIPSSDYPYLSNLAVHPDYRRQGVAQQLLSNCEETAREWGFSEIYLHVLENNHAARQLYYQAGYRLQQVDWNWTGRLFGQPRRLFLRK 202
BLAST of NO10G03030 vs. NCBI_GenBank
Match: WP_096831386.1 (N-acetyltransferase [Tychonema bourrellyi] >PHX54525.1 N-acetyltransferase [Tychonema bourrellyi FEM_GT703]) HSP 1 Score: 63.9 bits (154), Expect = 8.300e-7 Identity = 40/103 (38.83%), Postives = 54/103 (52.43%), Query Frame = 0 Query: 160 VVGTVDVFEREAEGSTLPRR--LFLKNMIVDEAFRRQGFARRLLSRVEEHARNIGIKEVYLEVLANNEGAIQLYTQQGFQFTSNPMELLWRVLGIGRVTMVKK 261 + GTV+V R LP +L N+ V +RRQG A++LLS E+ R G EVYL VL NN GA QLY Q G++ + +LG R ++K Sbjct: 97 IAGTVEVALRSRLAWQLPSSDYPYLSNLAVHPEYRRQGVAQQLLSSCEQTVREWGFSEVYLHVLENNHGARQLYYQTGYRLEQVEWDWSCWLLGQPRRLFLRK 199 The following BLAST results are available for this feature:
BLAST of NO10G03030 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 8
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO10G03030 ID=NO10G03030|Name=NO10G03030|organism=Nannochloropsis oceanica|type=gene|length=1120bpback to top protein sequence of NO10G03030.1 >NO10G03030.1-protein ID=NO10G03030.1-protein|Name=NO10G03030.1|organism=Nannochloropsis oceanica|type=polypeptide|length=262bpback to top Synonyms
Publications
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