NO10G03010, NO10G03010 (gene) Nannochloropsis oceanica

Overview
NameNO10G03010
Unique NameNO10G03010
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4663
Alignment locationchr10:835414..840076 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:835414..840076 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR001810F-box_dom
Homology
The following BLAST results are available for this feature:
BLAST of NO10G03010 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL052nonsL052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR004ncniR004Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR015ngnoR015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO10G03010.1NO10G03010.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO10G03010.1NO10G03010.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO10G03010 ID=NO10G03010|Name=NO10G03010|organism=Nannochloropsis oceanica|type=gene|length=4663bp
ATGCCGTCCAAACGAAAATCCAGCCGCAAGCCAGGCAGCAGCAGCAGCAG
CAGCAGCAGCAGCAGCAGTGAGCCTCCTCCCACGTCTGCCACAGCTGCCC
CGGCTTCATTCCTATCCCGCGTGGCACAAAATTTACCTTCCGAGGTCTTA
AGGAAGGTCTACACCTCTCTGCCTTACAACGAGCAGCTTGGGCTGGCCAC
GGTCGACAAGGAATTGCGGAAGGTCGTGCTGGATTCCATGCCAAGGGCTT
TGTTTTGCATTACGAAATCCACCTCCCTGCACTCCTTGCCAACGCTGATG
CCTGGGTTGTTGGAATTGGTCTTGTTTATTTGCTACGATCAGGAATTCGC
CCGGCTGCACCAACGCAAGCGTCGACGCGAGCGGCGGGCGTTACATGCGC
AGCATTTGATGCCTGACGAACAGTTGCAGAGAATGGAAGAGGAAGAAGAA
GGTGAGACCGAAAGATTTTACGATTATCGTCGTGAAGACCGCCCAAGATT
AGAGGTGGCAATTTTGACGGCCTTTCCACGCTTGAAGAAGCTAATTGTCA
TCATAGACTGCCGGTTTCTCCCCTGCCTTCCAAGCTTACCGTCACCGTAC
GTCTTTCGAAACCTGTCCTCCCTCGAAATCCGGATGGATCGAAACGTCTA
CTTCGAAGGAAGGTTCTCTATGAGCAGTATACTGAGACCGTTATGTTGTT
TGAGGTTCCCAGCGCTCAAGGTCTTGGATTTGGAGGGCATTCAATCCCCC
GAGGTGGGCGGATATTTGTCATATCCGAGACTACCTGCTCACGTGCAGAC
CAGTATCATGACGTTGGACTCTCTGTCTATCCGTTCGCGACCGGAGGATC
TTATTAAACTTTTCCAGAGTTGGGAAAGTCACCCTGATTTGAGGCTCACA
TTGAAAAGTTTTAGCCTGACGCTGCATGGTTCCATCACTTACTCTACTTT
CCTGGACGAGTGTCTCTCTTACCCTTCAACATGTTCCTGGCTCCTTTCTC
TCCCCTTCGTCCAAATTACTGTCACGGGTAATCGACGCGGAAAACAGGCG
AGGGACAATGTGACGTCCTTTTGGAGCAAGACAGACGAGGAGGGCTTGAA
ACGGCAGCAGCTCGCCTTGCTTCTCGATGCCTATGGTCCTGGCGAGTGCC
CCATGGTCCCTCAAGCTGTCGTTGACCTTCTTTCCAGCCCTAAGCGCACC
TTACCCACCTTGGCCATATTTGATGGACTTGAAATATTGTTGAGAGAGTG
TCCTGTGGCTGGTTTACAGGGAATGATGGAACGTATCCCCACTATCGCCG
ATGCAGCCATGAGCACTCTTCATTTTGCTGCTGCTCCTGCTGCTGGTACT
AGCGCTGTTACCACCGAACGACAGGATAAAATGGCACTGACACTCGGCAG
AATTTCGGTGTTAGTATCGATAAGGAGGGTGGATTGGTTGAACAAGAAGA
AATCTTTTTCGCTGCTGTTTGCTACTGCGCTTGTAGAGAGGGGAGTGGTC
AAGACATTGTTGCAAATTTTGGCTCGAGGGAAGGATAAGGAGGGGGAGGA
TGTGGTGTCTTCGGTAATGTTCCTCTTCCGGGCCTTGCCTATCGAGGCCT
TTCGACCTGAAGGAGGGTGGAGGGGAGGAGGCAGAGGTGGAAGAGGAAGA
GGAGGAGGAGGAGAAGGACGAGGTGGAGGGGGACAGGGAGGAGGCATCAC
CATCCCCTTGTTGCTTTGTTTGGTTGACATCGTGGTCTCACGGCACGCGA
GGCAGGATATACGCCGTTTATGGAACCTCTCCGTGTTGCTTCAAGTGTTT
AAAATGTGCCCTTTAAAGGAGGTGGTTTTACCGGTGGTGGCGACGAGAGA
AAAGGTGTTGACACGTGCTATTCTTTCGTGTTTGGGTGTCGGGCATTTGA
AGGCCTGGGGGACATCATCTCAAGGAGGGAGGCTGATGCATCCAGCGGTT
GGGTTGATGAAGTTTCTCATTGGGGGGCAGAGGGATGGAAGGGGACAGGG
AGAGAACGGGGAGTCGTCGTTTGTGATGAGGGTGAGGGAGAGTGTGATGT
CGGGGAAGGTGGTTGTTGAGAGGAGTGTATGGGAAAGCAGGTCGATAGGT
AAACTAGAGGGGGAGCGGGAAGATATGAACGCGGTTATGAGGAAGGCGTC
AACGGTTGAAGGGAAGGACGTGAAGGGGGAGAAGGGAGGGAGGGTAGAAG
AGAAAGGAGGAAAAGGTGTCACAGCAAGTACCTTGTCGAAATCCGCCACA
AAAGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAATAAAACCAC
CACCACCACTAGCAGCAGAAACAACAGTAGCAGTAGCGCATGTCAGAGTA
GGGGGCAGCTGATGGCGCGTTTGATTATCGGGTGTTCTTATTTCAACAGA
TCGCTGACCGTTCTTTTCCCTCCGCCACATTCGCCATCGGCCACGCAAGA
TGGAAGTGAAAGGGTTAAAGTAGGAAGGGAAGGAGTGGAGGGGAAAGTGG
CAGGAGTAGGAGGAGGAGTAAGAGGAGTAGGAGCAGACATGACAGAAGGA
AGGTGGTCCACATTAAGCAGCAGCAACAGCGGCAGCAGTAGCAACAGCGG
CAGCAGCAGCAGCATGGGAGAAGTTGTGGTCGCGCTGCTGGTTGCCAAGG
AGGAGGAAGATGAGAAAGCAGGAGCGACACGTAGCACATCGGCCGCAGTC
TGCTGGGCACAACAGGGGGTTTTTACCTTGTCAAGAATCGAGCTGGGTCT
AGCCGTGCGGAAGATCATTCTGGCTGGAGGGAAGGTGAAAAGGCTGCTGG
TCGAGAGGGCTGGCAAAACGAATCTGCTGCCGTTGTTGCTGGCGTTGCCG
GAACAGGAGGATGACCTGTCGGAGGTCTTTGGGGTTATGTGCAACCTGTA
TGAGGAGGATGAGGAGGAGGAGGAGGAGGAGATGAAGGAGAGTGATAAAG
AGGAGGAGGGGCAGTTGAAATCGAAGGGAAAGGAAAGGCTAAGGAAATGC
TTGGACAGCGCATTGCGGGATATGGTGGTGTGTGCACGGGTGTCGCATGT
ATATAAAGAAGTAGTGACGAGAGCTGTAGTTCAATTTTTGAGAAATTTGC
CAAAAAAAGAACCGACGTGGTTGAAGCTCTTGATCGAGGCATTGTTTGAT
GATGGGAAGCGGGAGGATGGGGAAGGAAATATGGTGGGAGGAGGGAGGAG
GAAGAAAAAAGAGAAAAGAGAAGAGGGATGGGAGCAGGGTGGTAAAGCAG
GAAGCTTTGTTGTATATGAGGTAGTATTAGGCTTTGCGGAGGAGTCGTGG
GGGCATGCAATGAAGGCCTACGGGATCTTGCAGGGACTGCAACGGGCAAT
AGATGAAGGAGGGAGGGAAGGAGGGGTTGTTAAGGCTTTTTTGCATCAGC
GTCTTGTGATGGCGAGGATGGTAAGGTTGGCAGTGAAGGTGACAGATAAA
TTGAGTTACGATTATCATGGCTGTGTCCGCGATGGATTGATACGGCACTT
TCGTCGGGTGTTCCGGATGATGAATATGGAGGAACGGGAGGCGATGCGGA
GGAAGTGTGTGGTACCTTTGAGAGGAAATTTCCCCGAAGGAGCTCAGAAC
GTGGAGAAGATTTTTAAGCAGCAAGACGAGGCTGAGAGCATGGGAAAGCG
AGAGGAGGAAGCGGATTCGGACTCAGAGAGGTGGGGAGATGAGGACGAGG
ACGAGGACGAGGACGAAGAGGGGGAGCTGATGGCTCCGATGGTGGCTTTG
GCGGCGGTAGAAGAAGCTGAGGCAGAAGAAAGAGAGTTATTGGAAATCAT
GGAGATCGATGAGAGCGACCAGGAATGGGACGGTGACGAACAGGAAGGAG
AGGGGGGGGACAGTAGTAGTAGCAGCAGCAGTGAGGGCGAGGAAGGAGGG
GGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG
AGGAGGAGGAAGACGAAGAAATAGAAGAAGGAGAGGGCTAGTGATCGCTT
CCAAGAAAGGAGAAACAGTTCAGGATGGGGTTGGCGACGCAACAGTATCC
GCACGAGCGGCAAAAGCACAAGTAAAATCAGCTACAGGGACGGTAGCGGT
AGAGTATGGCGAGGAGGAAGACAAAGACGACGACGACGACGACGAAGAAG
AAGAAGAAGAAGCAGAAAAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAG
GAGGAAGACGAGGGTTACTTCTCCTCTGATATGGACAGTGTGGTTTTTGA
TGAGGAGGACGACGACGATGAGGATATCGAGGATAGTGACGATGAATATG
AGGAGGGGGGAAATGATCGGCAGACGGATTGGTGGTTTCGTTCTGGGAGG
GATAATGTGGATATGGAGGGGCTGATGATGGATTGCGAGGCGCCGCTGGA
GGAATCACAATTGTGGATCTGAGGAGGGAGGAAGAGGAGAAGGTGGGCAG
CAACACAGCAGGTAGAAGGATTGGGTGATCAACAAAAGACAGTGAGGGAA
TAAGCTGATGTACATGCGAATAAGAACAGGGCTGGGGAAGTGTACGTAAG
ACTAGTCGTGGCCGCAACAGCGGCTGTAGCGAATGACACGCAGAGAGACA
AAAAAGAGAGAAGGAGATATGTAGAATAAACAAATTTCCGCTGGTCGTTG
CCACTTGTACGCT
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protein sequence of NO10G03010.1

>NO10G03010.1-protein ID=NO10G03010.1-protein|Name=NO10G03010.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1474bp
MPSKRKSSRKPGSSSSSSSSSSSEPPPTSATAAPASFLSRVAQNLPSEVL
RKVYTSLPYNEQLGLATVDKELRKVVLDSMPRALFCITKSTSLHSLPTLM
PGLLELVLFICYDQEFARLHQRKRRRERRALHAQHLMPDEQLQRMEEEEE
GETERFYDYRREDRPRLEVAILTAFPRLKKLIVIIDCRFLPCLPSLPSPY
VFRNLSSLEIRMDRNVYFEGRFSMSSILRPLCCLRFPALKVLDLEGIQSP
EVGGYLSYPRLPAHVQTSIMTLDSLSIRSRPEDLIKLFQSWESHPDLRLT
LKSFSLTLHGSITYSTFLDECLSYPSTCSWLLSLPFVQITVTGNRRGKQA
RDNVTSFWSKTDEEGLKRQQLALLLDAYGPGECPMVPQAVVDLLSSPKRT
LPTLAIFDGLEILLRECPVAGLQGMMERIPTIADAAMSTLHFAAAPAAGT
SAVTTERQDKMALTLGRISVLVSIRRVDWLNKKKSFSLLFATALVERGVV
KTLLQILARGKDKEGEDVVSSVMFLFRALPIEAFRPEGGWRGGGRGGRGR
GGGGEGRGGGGQGGGITIPLLLCLVDIVVSRHARQDIRRLWNLSVLLQVF
KMCPLKEVVLPVVATREKVLTRAILSCLGVGHLKAWGTSSQGGRLMHPAV
GLMKFLIGGQRDGRGQGENGESSFVMRVRESVMSGKVVVERSVWESRSIG
KLEGEREDMNAVMRKASTVEGKDVKGEKGGRVEEKGGKGVTASTLSKSAT
KGSSSSSSSSSSSNKTTTTTSSRNNSSSSACQSRGQLMARLIIGCSYFNR
SLTVLFPPPHSPSATQDGSERVKVGREGVEGKVAGVGGGVRGVGADMTEG
RWSTLSSSNSGSSSNSGSSSSMGEVVVALLVAKEEEDEKAGATRSTSAAV
CWAQQGVFTLSRIELGLAVRKIILAGGKVKRLLVERAGKTNLLPLLLALP
EQEDDLSEVFGVMCNLYEEDEEEEEEEMKESDKEEEGQLKSKGKERLRKC
LDSALRDMVVCARVSHVYKEVVTRAVVQFLRNLPKKEPTWLKLLIEALFD
DGKREDGEGNMVGGGRRKKKEKREEGWEQGGKAGSFVVYEVVLGFAEESW
GHAMKAYGILQGLQRAIDEGGREGGVVKAFLHQRLVMARMVRLAVKVTDK
LSYDYHGCVRDGLIRHFRRVFRMMNMEEREAMRRKCVVPLRGNFPEGAQN
VEKIFKQQDEAESMGKREEEADSDSERWGDEDEDEDEDEEGELMAPMVAL
AAVEEAEAEERELLEIMEIDESDQEWDGDEQEGEGGDSSSSSSSEGEEGG
GGGGGGGGGGGGGGGGGGGGRRRNRRRRGLVIASKKGETVQDGVGDATVS
ARAAKAQVKSATGTVAVEYGEEEDKDDDDDDEEEEEEAEKEEEEEEEEEE
EEDEGYFSSDMDSVVFDEEDDDDEDIEDSDDEYEEGGNDRQTDWWFRSGR
DNVDMEGLMMDCEAPLEESQLWI*
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Synonyms
Publications