NO10G02990, NO10G02990 (gene) Nannochloropsis oceanica

Overview
NameNO10G02990
Unique NameNO10G02990
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2477
Alignment locationchr10:828924..831400 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:828924..831400 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO10G02990 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL052nonsL052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR004ncniR004Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR015ngnoR015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001174NSK001174Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO10G02990.1NO10G02990.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|585788gene_3904Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO10G02990.1NO10G02990.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO10G02990 ID=NO10G02990|Name=NO10G02990|organism=Nannochloropsis oceanica|type=gene|length=2477bp
AAATTCTACAGGACGCAAAGCCCTCGAAAGAAAAGTAATTGCTGTAATCG
GACGTATCCAAAACTCTGATCTTTGTGGTGTAAAAGCGCCGGGCACCTTT
TACCAACAACCATCAAGCACCATGAGCGGCTCAGCGGTGGCATCATCATC
CTCCTTCTCTTCACCATTATCCTCCTCATCCTCTCCCTCCTCATTTCTCT
ACTTGCCCCTCGTGACTGCTTGTCTCTTCCTTCTTATGGCGATCTCTTCC
GCAGTAGCTGTGCCTGTGGGGATCACACAGAATTCGAAACGGGAAGACAC
ACTCGGAGCTCAGgtgaggatgtaaattctccgtgcatgtaaacgtgtgc
ggggggagcagcagctgattctgagttagaagctctactacgctgtttgc
ttcttcgtttgcttatttgttgttgtggttcgatttgaaaattgtccgac
aggggatattcaccatccacatatgccttgtttttatttatcctttcttc
cccttcaatcatgcgtatacagTTTCCCACTCAAATGACAACCACTGCCA
GTATCAAAGACACGAGGAGTAGCTTTGCTCGTCTGCTGGACGTATCATTG
CCCTTACCTGAAGACTGGACCTTCGCCCCAGAGgtatgagcgagaatgag
tgtgacaggggggctttttgcattgagggtctagaatactcatttccttc
ccatgtcactttatcggatagCCAAAGACAGTGCATCGAGGCCTGTACTC
ATCCAGCTCTTTCTCGTTTGACTTCGACTCTGCAAGCGTGGCCCCTAGCT
TCAGCTCTGCGCCCACTCTGACACCGCCTGTTTCTCACACGCAATCGCCT
TCAAGCATTTTAACGTCGCTCAATTCTGTATCCTTGTCCCCTTCTACGAT
GACGTCTTCTAACTCACCTAGTCCCGCTCCCGAGGTCCTCTCCGATGTGT
CGAAGgtaaggatcagaaaggatagcgatcttaaattgtcaatttgcgct
cttttaaccttcacgtcattgctgcgaagtacatgagttgatcagcttat
tttaagcgcgcgtgcaattgaacaaagaggtccacggcacacacacacac
acaaatgtaggccaaactctcacacacacgatttttacgccgcatgtacg
caatgtcgtgcacacggtaacagGCGCCTTCTGCTAGCCCAGGATTACAG
CCCATTACCGAGACTATGCCAGTCGTGACCATCGGCATGGACTTGGCCGG
GACCCCAGAGCAACAAGCCAGTACCATTGCGGCCATCTCCAGCTACATTA
ACCAGATGCTCAGAGTAAATGTTGCGCCCTCTTTGCCGGCAGGCCCTGTG
CCACCACCTTTGCTTGTCATTCCAGACCCGGCTGAGCCGGGTCAGACCCC
TACCGACGGCGGTTTCACCAATATTGATGACGGAACCGCCATAACTGCAC
CCGCTACAGGCATGCCTTCTCCGGCTCCCACATTCTCACCAACAACCAGT
AGCACCAATAGTACAGAATCACCTACTTCTGATCCAATCGGCAACGATAC
CGTGCCTTCAACTGCTAGCTTAACCATCGGCGACAGAGCCTTGACTCCCG
GTCCGATCGTCGCCGAGACAGTGGCCGGAACTGTCATCGCGACCATCAGG
GACAGCACTAGAAACAACGACAGTGGTCGCCGCCGTCGCCTCATCTCAAC
CATCCGCGTTGTTACCCTTGCGCGTTTAAATCCCTCACACAGATTTATGC
AATTAGCTAACTCGAACTCGTCGTTGTGCGGCGGACAGCACTCTACCACC
ACTCTGGCACTCGAGAACTATGGAGACGAAGCTGCCATCCTCGACCTCCT
TGCGGCCATCATGAATGGAAGTGCGGTCCTACCCGCAGCTGATAACACCA
CAGACATGTTAGATACTATTTGCGCTGTCACAACGACCTTGACCGTGGTA
CCGTTGGTGCCTTCGGACGAAGTCGACGATAGTGATAGGGGTGGCCTGGA
TCTTAAGGGTTTATCTACCGCCGTAATTATTGGTATTGCAATGGCGGGAT
CAGTGGCCATGCTCATAATCGCATTTTTCATCTATCGCTGCAAGAGGATT
ATTATAATGACAGTAGCCATGAGCACAGCGGCCAAATCCAGCTCCTCGAT
GGCCGTCATGGATGCACCTACCCCGCCTCCAAGCCCTGCTATCACGACCA
CCGCTTCATAGACGACTTACAAGAAAGAGCCAATTCCATAAACCGCGCGG
CCAGCCTCAAAAACATTCAGACTTATAATATTACTTTATAATCATATCTT
CACGACAAGTAGCGCTATTCTCCATGTCTTGTTTTGCAGATCAAAATTGG
AAAGTGCTCGTATAGTAAGGGTCAAGTAAGACAAATTGCACAGATCTTGA
TTCGTTTTGACGGTTGAGTCTATCGTCTGCACTGTCAAGAGAAGAAGCAA
GGATTACATCTTTCAAAGTTAAGAGTC
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protein sequence of NO10G02990.1

>NO10G02990.1-protein ID=NO10G02990.1-protein|Name=NO10G02990.1|organism=Nannochloropsis oceanica|type=polypeptide|length=525bp
MSGSAVASSSSFSSPLSSSSSPSSFLYLPLVTACLFLLMAISSAVAVPVG
ITQNSKREDTLGAQFPTQMTTTASIKDTRSSFARLLDVSLPLPEDWTFAP
EPKTVHRGLYSSSSFSFDFDSASVAPSFSSAPTLTPPVSHTQSPSSILTS
LNSVSLSPSTMTSSNSPSPAPEVLSDVSKAPSASPGLQPITETMPVVTIG
MDLAGTPEQQASTIAAISSYINQMLRVNVAPSLPAGPVPPPLLVIPDPAE
PGQTPTDGGFTNIDDGTAITAPATGMPSPAPTFSPTTSSTNSTESPTSDP
IGNDTVPSTASLTIGDRALTPGPIVAETVAGTVIATIRDSTRNNDSGRRR
RLISTIRVVTLARLNPSHRFMQLANSNSSLCGGQHSTTTLALENYGDEAA
ILDLLAAIMNGSAVLPAADNTTDMLDTICAVTTTLTVVPLVPSDEVDDSD
RGGLDLKGLSTAVIIGIAMAGSVAMLIIAFFIYRCKRIIIMTVAMSTAAK
SSSSMAVMDAPTPPPSPAITTTAS*
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Synonyms
Publications