NO10G02920, NO10G02920 (gene) Nannochloropsis oceanica

Overview
NameNO10G02920
Unique NameNO10G02920
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3017
Alignment locationchr10:809581..812597 -

Link to JBrowse

Properties
Property NameValue
DescriptionDihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:809581..812597 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016746transferase activity, transferring acyl groups
GO:0016746transferase activity, transferring acyl groups
GO:0016740transferase activity
Vocabulary: INTERPRO
TermDefinition
IPR036625E3-bd_dom_sf
IPR011053Single_hybrid_motif
IPR015761BCKDC_E2
IPR004167E3-bd
IPR000089Biotin_lipoyl
IPR0010782-oxoacid_DH_actylTfrase
Homology
[Close]
BLAST of NO10G02920 vs. NCBI_GenBank
Match: EWM25504.1 (dihydrolipoamide branched chain transacylase e2 [Nannochloropsis gaditana])

HSP 1 Score: 610.1 bits (1572), Expect = 7.500e-171
Identity = 362/566 (63.96%), Postives = 404/566 (71.38%), Query Frame = 0 
Query:   70 QYRASSMSALEEPPYDYVSXXXXXXXXXXXXXXXXXXXXKIMPFLLADIGEGIAEVELMQWFVQEGESIKQFDRVCEVQSDKATVEISSRYDGVVSRVHHPVGAVVKVGSALIDIEVARPNNHTAAATLAAAPTMNNADLPSPAMMAAAAPVTSPPL--LPTVSLQQQPQHHLPQHKQSERASNINREGNRGDIVPATPAVRRWAKEYGVDLAFVRATGPQGRVLKGDVLNHISTRNGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSSPLSALHLTASQRVPIRGVMRQMVKSMNASLKIPHFGYQDEVCMDKAAAFRSSLRPLAEEQGLKFTYLPLMLKAASLALLRFPILNASLSEDEKEVVYHSSHEIGVAMATSKGLIVPVLRKVQEKSLMEIARELAVFQCKAEGQGGREGGQGGFKEEDFQGATFSLSNIGSLGGTYMDAKIVPPQVAIGAVGRIQMLPRY--VQASEG-EVGREGGPVVMPVRVMAISWAGDHRVVDGATMAKFSNLWKKYLEEPALMLAETR 631
            Q R  SMSAL+EPPYD VS                    K++PFLLADIGEGIAEVELMQWFVQEGE++KQFDRVCEVQSDKATVEISSRYDGVV RV HPVG+VVKVGSALIDIEV    N ++ ATLA APTMNNAD+PSPA  A AA V+SPPL     + +Q Q  H      +    +  N     G+IVP TPAVRR AKE+GVDL+ VR TGP+GRVLKGDVL+ I+   G                                          XXXXXXXXXXX             P SA  LT  +RVP+RG+MRQMVKSMNASLKIPHFGYQDEVCMDKAA  R+SLRP AE QG K TYLP+MLKAASLALLR+P+LNASLS DE+E++YH  H IGVAMATSKGL+VPVLRKVQE+SL+EIA ELA FQ KAE  GG +GG GGFKEEDFQGATFS+SNIGS+GGTYMDAKIVPPQVAIGA+GRIQ LPR+   +  EG +V  E G VV+P +VMAISWAGDHRVVDGATMAKFSNLWK YLEEPA MLAETR
Sbjct:   99 QRRRLSMSALQEPPYDEVS-----SGPPSSPAGASAGGGKLVPFLLADIGEGIAEVELMQWFVQEGENVKQFDRVCEVQSDKATVEISSRYDGVVRRVLHPVGSVVKVGSALIDIEVGGQENSSSTATLATAPTMNNADVPSPAEAAEAALVSSPPLGGSEPLPVQAQASHSSTADLKKGPETTYNSRDMTGEIVPTTPAVRRLAKEHGVDLSLVRPTGPEGRVLKGDVLDFIAAHQG------HVGLPPSFFPASPLPPGVPASATGTRPVPGEAASPAXXXXXXXXXXXLGSSSFLKPAVLPPFSAAALTEPKRVPVRGIMRQMVKSMNASLKIPHFGYQDEVCMDKAAGLRASLRPFAEAQGFKLTYLPIMLKAASLALLRYPLLNASLSADEREIIYHPDHHIGVAMATSKGLVVPVLRKVQERSLLEIAGELADFQRKAE--GGDQGG-GGFKEEDFQGATFSMSNIGSMGGTYMDAKIVPPQVAIGAIGRIQTLPRFGPARTVEGSQVSSEKGLVVLPTKVMAISWAGDHRVVDGATMAKFSNLWKSYLEEPATMLAETR 650
[Close]
BLAST of NO10G02920 vs. NCBI_GenBank
Match: GAX98690.1 (lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, putative [Pythium insidiosum])

HSP 1 Score: 352.4 bits (903), Expect = 2.800e-93
Identity = 238/519 (45.86%), Postives = 313/519 (60.31%), Query Frame = 0 
Query:  111 MPFLLADIGEGIAEVELMQWFVQEGESIKQFDRVCEVQSDKATVEISSRYDGVVSRVHHPVGAVVKVGSALIDIEVARPNNHTAAATL-AAAPTMNNADLPSPAMMAAAAPVTSPPLLPTVSLQQQPQHHLPQHKQSERASNINREGNRGDIVPATPAVRRWAKEYGVDLAFVRATGPQGRVLKGDVLNHISTRNGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSSPLSALHLTASQRVPIRGVMRQMVKSMNASLKIPHFGYQDEVCMDKAAAFRSSLRPLAEEQGLKFTYLPLMLKAASLALLRFPILNASLSEDEKEVVYHSSHEIGVAMATSKGLIVPVLRKVQEKSLMEIARELAVFQCKAEGQGGREGGQGGFKEEDFQGATFSLSNIGSLGGTYMDAKIVPPQVAIGAVGRIQMLPRYVQASEGEVGREGGPVVMPVRVMAISWAGDHRVVDGATMAKFSNLWKKYLEEPALMLAE 629
            +PF LADIGEGIAEVE++QWFV+EGE IKQF  VCEVQSDKATVEI+SRYDGVV ++H+ VG + KVG+ LIDI+V   ++ TAA+ +  A P       P+P  +  + P    P +PT                +  A  ++   +  + V  +P+VRR AKE+ +DLA V  +GPQGR+LK D+L +I                                            XXXXXXXXXXXXXXXXXXXXXXXX        +L     VP+  + + MVKSMNA+L+IPHFGY DE+ +D     R  L+P+AE +G+K +++P ++KAASLAL   P LNA++SEDE  V   ++H I VAM T  GLIVP ++ VQ KS+++IA +L   Q  A          G     D  G TFS+SNIGS+GGTYM   I+ PQVAIGAVG+ Q +PR+         ++G   V+PVR+M +SW+GDHRV+DGATMA+FSN+WK YLE P  ML+E
Sbjct:   31 IPFKLADIGEGIAEVEVLQWFVKEGEPIKQFQNVCEVQSDKATVEITSRYDGVVKKIHYNVGEMAKVGTTLIDIDV---DDATAASVVETAKPAQARKGPPTP--VGGSVPKAVKPQVPTPKXXXXXXXXXXXXXXTRAAPVVSSARSTSEKVLTSPSVRRLAKEHDIDLADVEGSGPQGRILKEDLLEYIRA-----------------------------------------LXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTYLEEDTTVPLTPIQKMMVKSMNAALRIPHFGYADEIEVDSLYELRDKLKPVAEARGIKLSFMPFIIKAASLALKHHPSLNATVSEDETHVTMLAAHNISVAMDTPTGLIVPNIKNVQSKSILDIAADLNRLQALASA--------GKLTPADLTGGTFSISNIGSVGGTYMSPVIMVPQVAIGAVGKFQTVPRFT--------KDGS--VVPVRIMNVSWSGDHRVIDGATMARFSNMWKLYLENPVSMLSE 485
[Close]
BLAST of NO10G02920 vs. NCBI_GenBank
Match: XP_002909052.1 (lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, putative [Phytophthora infestans T30-4] >EEY57866.1 lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, putative [Phytophthora infestans T30-4])

HSP 1 Score: 348.2 bits (892), Expect = 5.300e-92
Identity = 217/518 (41.89%), Postives = 283/518 (54.63%), Query Frame = 0 
Query:  111 MPFLLADIGEGIAEVELMQWFVQEGESIKQFDRVCEVQSDKATVEISSRYDGVVSRVHHPVGAVVKVGSALIDIEVARPNNHTAAATLAAAPTMNNADLPSPAMMAAAAPVTSPPLLPTVSLQQQPQHHLPQHKQSERASNINREGNRGDIVPATPAVRRWAKEYGVDLAFVRATGPQGRVLKGDVLNHISTRNGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSSPLSALHLTASQRVPIRGVMRQMVKSMNASLKIPHFGYQDEVCMDKAAAFRSSLRPLAEEQGLKFTYLPLMLKAASLALLRFPILNASLSEDEKEVVYHSSHEIGVAMATSKGLIVPVLRKVQEKSLMEIARELAVFQCKAEGQGGREGGQGGFKEEDFQGATFSLSNIGSLGGTYMDAKIVPPQVAIGAVGRIQMLPRYVQASEGEVGREGGPVVMPVRVMAISWAGDHRVVDGATMAKFSNLWKKYLEEPALMLAE 629
            +PF LADIGEGIAEVE++QWFV+ G+ +KQF  VCEVQSDKATVEI+SRYDGVV++VH+ VG + KVGS LIDI+V       A A           D   P    A +PV + P+                     R S   R     + +  +P+VRR AKE+ +DL  V  TGPQGR+LKGD+L +I  R                                                                      +A +L     VP+  + + MVKSMNA+L+IPHFGY DE+ MD     R  L+PLAE +G+K +++P ++KAASLAL  +P+LNA+++E E EV   ++H + VAM T  GLIVP ++ VQ KS++EIA +L   Q  A          G     D  G TFS+SNIGS+GGTYM   ++ PQVAIGA+G+IQ LPRY   +EG         V PVR+M +SW+GDHRV+DGATMA+FSN WK+YLE P  ML E
Sbjct:   33 VPFKLADIGEGIAEVEVLQWFVKSGDEVKQFQNVCEVQSDKATVEITSRYDGVVTKVHYEVGEMAKVGSTLIDIDV-----DEATAXXXXXXXKKKGD---PIPRRAPSPVATEPVXXXXXXXXXXXXXXXXXXVVSRVSLAPRRLEGEEKLLTSPSVRRLAKEHSIDLHDVEGTGPQGRILKGDLLEYIRMR----------------------------------------------ATQPSTSSVSQSTTATPPPVVDGSNATYLQQDTVVPLTPIQKMMVKSMNAALQIPHFGYADEIRMDALYDLRKELKPLAEARGVKLSFIPFIIKAASLALKHYPMLNATVNESETEVTLVAAHNVSVAMDTPTGLIVPNVKNVQAKSILEIAEDLNRLQQLAVA--------GKLAPSDLTGGTFSISNIGSIGGTYMSPVLMVPQVAIGAIGQIQKLPRY--DTEGN--------VEPVRLMNVSWSGDHRVIDGATMARFSNQWKEYLETPVSMLTE 478
[Close]
BLAST of NO10G02920 vs. NCBI_GenBank
Match: XP_008605774.1 (hypothetical protein SDRG_01993 [Saprolegnia diclina VS20] >EQC40930.1 hypothetical protein SDRG_01993 [Saprolegnia diclina VS20])

HSP 1 Score: 342.4 bits (877), Expect = 2.900e-90
Identity = 213/518 (41.12%), Postives = 289/518 (55.79%), Query Frame = 0 
Query:  113 FLLADIGEGIAEVELMQWFVQEGESIKQFDRVCEVQSDKATVEISSRYDGVVSRVHHPVGAVVKVGSALIDIEVARPNNHTAAATLAAAPTMNNADLPSPAMMAAAAPVTSPPLLPTVSLQQQPQHHLPQHKQSERASNINREGNRGDIVPATPAVRRWAKEYGVDLAFVRATGPQGRVLKGDVLNHISTRNGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSSPLSALHLTASQRVPIRGVMRQMVKSMNASLKIPHFGYQDEVCMDKAAAFRSSLRPLAEEQGLKFTYLPLMLKAASLALLRFPILNASLSEDEKEVVYHSSHEIGVAMATSKGLIVPVLRKVQEKSLMEIARELAVFQCKAEGQGGREGGQGGFKEEDFQGATFSLSNIGSLGGTYMDAKIVPPQVAIGAVGRIQMLPRYVQASEGEVGREGGPVVMPVRVMAISWAGDHRVVDGATMAKFSNLWKKYLEEPALMLAETR 631
            F L+DIGEGIAEVE++QWFV+ G+ I QF  + EVQSDKATVEI+SR+DG ++++H+  G + KVGSALID++V   ++  AAA  A++   +              P  +P +     +  +P   LP          I R    G  +  TP+VRR A+E+ +DL  V A G   R+LKGDVLN+I                                                                     S+  +   LT S  VP+  + + MVKSMNA+LK+PHFGY DE+ M+     R++L+P+A  +G+K TYLPLM+KAASLAL  +P+LNAS+SEDE  +  H+ H I VAM T KGL+VP ++ V+ KS+++IA +LA  Q        + G  G     D  G TFSLSNIGS+GGTYM   I+ PQVAIGA+G+IQ LPR+  A++G         V+PV+VM +SW+GDHRV+DGATMA+FS  WK YLE P  ML E +
Sbjct:   92 FKLSDIGEGIAEVEVLQWFVKPGDKIAQFQNLVEVQSDKATVEITSRFDGTITKLHYEPGQMAKVGSALIDLDV---SDEVAAAQNASSAPKSXXXXXXXXXXXXXXPTPTPIVSAPTPVSAEPVARLP----------ITRPSTGGKFL-TTPSVRRLAREHNIDLEDVPAEG--DRILKGDVLNYIK-------------------------------------------YLAENKAAPAPVATPSASSVAPASASATPAFEFLTESTTVPVTPIQKMMVKSMNAALKVPHFGYADEIEMNALDELRNTLKPIASARGVKVTYLPLMIKAASLALKYYPVLNASVSEDESSITMHAQHNISVAMDTPKGLLVPNVKNVESKSVLDIAEDLARLQ--------KLGADGKLGPADLTGGTFSLSNIGSIGGTYMSPVIMVPQVAIGALGKIQTLPRF--AADGS--------VVPVKVMNVSWSGDHRVIDGATMARFSTKWKAYLENPIAMLTELK 532
[Close]
BLAST of NO10G02920 vs. NCBI_GenBank
Match: ETI52610.1 (hypothetical protein F443_04331 [Phytophthora parasitica P1569] >ETL99060.1 hypothetical protein L917_04039 [Phytophthora parasitica])

HSP 1 Score: 341.3 bits (874), Expect = 6.500e-90
Identity = 212/518 (40.93%), Postives = 277/518 (53.47%), Query Frame = 0 
Query:  111 MPFLLADIGEGIAEVELMQWFVQEGESIKQFDRVCEVQSDKATVEISSRYDGVVSRVHHPVGAVVKVGSALIDIEVARPNNHTAAATLAAAPTMNNADLPSPAMMAAAAPVTSPPLLPTVSLQQQPQHHLPQHKQSERASNINREGNRGDIVPATPAVRRWAKEYGVDLAFVRATGPQGRVLKGDVLNHISTRNGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSSPLSALHLTASQRVPIRGVMRQMVKSMNASLKIPHFGYQDEVCMDKAAAFRSSLRPLAEEQGLKFTYLPLMLKAASLALLRFPILNASLSEDEKEVVYHSSHEIGVAMATSKGLIVPVLRKVQEKSLMEIARELAVFQCKAEGQGGREGGQGGFKEEDFQGATFSLSNIGSLGGTYMDAKIVPPQVAIGAVGRIQMLPRYVQASEGEVGREGGPVVMPVRVMAISWAGDHRVVDGATMAKFSNLWKKYLEEPALMLAE 629
            +PF LADIGEGIAEVE++QWFV+ G+ +KQF  VCEVQSDKATVEI+SRYDG+V++VH+ VG + KVGS LIDI+V   +  TAAAT             +P       PV +                        R     R     + +  +P+VRR AKE+ +DL  V  TGPQGR+LKGD+L +I                                                                         +  +L     VP+  + + MVKSMNA+L+IPHFGY DE+ MD     R  L+PLAE +G+K +++P ++KAASLAL  +P+LNA+++E E E+   ++H I VAM T  GLIVP ++ VQ KS+MEIA +L   Q  A          G     D  G TFS+SNIGS+GGTYM   ++ PQVAIGA+G+IQ LPRY          +    V PVR+M +SW+GDHRV+DGATMA+FSN WK YLE P  ML E
Sbjct:   33 IPFKLADIGEGIAEVEVLQWFVKSGDEVKQFQNVCEVQSDKATVEITSRYDGIVTKVHYEVGEMAKVGSTLIDIDV---DEATAAATQGGGKKKG-----APIPRRTPTPVATXXXXXXXXXXXXXXXXXXXXXXXSRVPIAPRRLEGEEKLLTSPSVRRLAKEHNIDLHDVEGTGPQGRILKGDLLEYI--------------------------------------------RMLATQPSTPAPPAGQSTATAQPPAVDGSNTTYLQQDTVVPLTPIQKMMVKSMNAALQIPHFGYADEIRMDALYELRKELKPLAESRGVKLSFMPFIIKAASLALKHYPMLNATVNESETELTLVAAHNISVAMDTPTGLIVPNVKNVQAKSIMEIAEDLNRLQQLAVA--------GKLAPSDLTGGTFSISNIGSIGGTYMSPVLMVPQVAIGAIGQIQKLPRY----------DADGNVEPVRLMNVSWSGDHRVIDGATMARFSNQWKAYLETPVSMLTE 480
[Close]
BLAST of NO10G02920 vs. NCBI_GenBank
Match: ETK92490.1 (hypothetical protein L915_04185 [Phytophthora parasitica] >ETL45899.1 hypothetical protein L916_04139 [Phytophthora parasitica] >ETO76876.1 hypothetical protein F444_07770 [Phytophthora parasitica P1976] >ETP22472.1 hypothetical protein F441_04276 [Phytophthora parasitica CJ01A1] >KUF80414.1 Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex [Phytophthora nicotianae] >KUF97343.1 Chromatin structure-remodeling complex subunit snf21 protein [Phytophthora nicotianae] >KUG00422.1 Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex [Phytophthora nicotianae])

HSP 1 Score: 341.3 bits (874), Expect = 6.500e-90
Identity = 212/518 (40.93%), Postives = 277/518 (53.47%), Query Frame = 0 
Query:  111 MPFLLADIGEGIAEVELMQWFVQEGESIKQFDRVCEVQSDKATVEISSRYDGVVSRVHHPVGAVVKVGSALIDIEVARPNNHTAAATLAAAPTMNNADLPSPAMMAAAAPVTSPPLLPTVSLQQQPQHHLPQHKQSERASNINREGNRGDIVPATPAVRRWAKEYGVDLAFVRATGPQGRVLKGDVLNHISTRNGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSSPLSALHLTASQRVPIRGVMRQMVKSMNASLKIPHFGYQDEVCMDKAAAFRSSLRPLAEEQGLKFTYLPLMLKAASLALLRFPILNASLSEDEKEVVYHSSHEIGVAMATSKGLIVPVLRKVQEKSLMEIARELAVFQCKAEGQGGREGGQGGFKEEDFQGATFSLSNIGSLGGTYMDAKIVPPQVAIGAVGRIQMLPRYVQASEGEVGREGGPVVMPVRVMAISWAGDHRVVDGATMAKFSNLWKKYLEEPALMLAE 629
            +PF LADIGEGIAEVE++QWFV+ G+ +KQF  VCEVQSDKATVEI+SRYDG+V++VH+ VG + KVGS LIDI+V   +  TAAAT             +P       PV +                        R     R     + +  +P+VRR AKE+ +DL  V  TGPQGR+LKGD+L +I                                                                         +  +L     VP+  + + MVKSMNA+L+IPHFGY DE+ MD     R  L+PLAE +G+K +++P ++KAASLAL  +P+LNA+++E E E+   ++H I VAM T  GLIVP ++ VQ KS+MEIA +L   Q  A          G     D  G TFS+SNIGS+GGTYM   ++ PQVAIGA+G+IQ LPRY          +    V PVR+M +SW+GDHRV+DGATMA+FSN WK YLE P  ML E
Sbjct:   33 IPFKLADIGEGIAEVEVLQWFVKSGDEVKQFQNVCEVQSDKATVEITSRYDGIVTKVHYEVGEMAKVGSTLIDIDV---DEATAAATQGGGKKKG-----APIPRRTPTPVATXXXXXXXXXXXXXXXXXXXXXXXSRVPIAPRRLEGEEKLLTSPSVRRLAKEHNIDLHDVEGTGPQGRILKGDLLEYI--------------------------------------------RMLATQPSTPAPPAGQSTATAQPPAVDGSNTTYLQQDTVVPLTPIQKMMVKSMNAALQIPHFGYADEIRMDALYELRKELKPLAESRGVKLSFMPFIIKAASLALKHYPMLNATVNESETELTLVAAHNISVAMDTPTGLIVPNVKNVQAKSIMEIAEDLNRLQQLAVA--------GKLAPSDLTGGTFSISNIGSIGGTYMSPVLMVPQVAIGAIGQIQKLPRY----------DADGNVEPVRLMNVSWSGDHRVIDGATMARFSNQWKAYLETPVSMLTE 480
[Close]
BLAST of NO10G02920 vs. NCBI_GenBank
Match: XP_009829617.1 (hypothetical protein H257_06179 [Aphanomyces astaci] >ETV80670.1 hypothetical protein H257_06179 [Aphanomyces astaci])

HSP 1 Score: 340.9 bits (873), Expect = 8.500e-90
Identity = 217/523 (41.49%), Postives = 290/523 (55.45%), Query Frame = 0 
Query:  113 FLLADIGEGIAEVELMQWFVQEGESIKQFDRVCEVQSDKATVEISSRYDGVVSRVHHPVGAVVKVGSALIDI----EVARPNNHTAAATLAAAPTMNNADLPSPAMMAAAAPVTSPPLLPTVSLQQQPQHHLPQHKQSE-RASNINREGNRGDIVPATPAVRRWAKEYGVDLAFVRATGPQGRVLKGDVLNHISTRNGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSSPLSALHLTASQRVPIRGVMRQMVKSMNASLKIPHFGYQDEVCMDKAAAFRSSLRPLAEEQGLKFTYLPLMLKAASLALLRFPILNASLSEDEKEVVYHSSHEIGVAMATSKGLIVPVLRKVQEKSLMEIARELAVFQCKAEGQGGREGGQGGFKEEDFQGATFSLSNIGSLGGTYMDAKIVPPQVAIGAVGRIQMLPRYVQASEGEVGREGGPVVMPVRVMAISWAGDHRVVDGATMAKFSNLWKKYLEEPALMLAETR 631
            F LADIGEGIAEVE++QWFV+EG+ I QF  + EVQSDKATVEI+SR+DGVV+++H+ VG + KVG  L+D+    EVA  +N  +    +AAP     +    A+  +  P+ S P          P   +PQ   S    S+I R   +   V  TP+VRR A+E+ +DL  +   G   R+LKGD+LN+I   +                                                                 SS  S   LT SQ VP+  + + MVK+MNASLK+PHFGY DE+ MD     R  L+ +A E+G+K TYLPLM+KAASLAL  +P+LNAS+S+ E  +  H+ H I VAM T KGL+VP ++ V+ KS+++IA+EL   Q  A          G     D  G TFSLSNIGS+GGTYM   I+ PQVAIGA+G+IQ LPR+  A            V+PV+VM +SW+GDHR++DGATMA+FS  WK +LE P  ML+E +
Sbjct:   34 FNLADIGEGIAEVEVLQWFVKEGDKISQFQNLVEVQSDKATVEITSRFDGVVTKLHYDVGGMAKVGHPLVDLDVSDEVAAAHNAGSGPKKSAAPGAKKVEQLKKAV--SPTPIKSSP---------APVAAIPQATTSAVSLSSIVR--TKSGKVLTTPSVRRLAREHNIDLEDIPVEG--DRILKGDILNYIRELS--------------------------------------------EAKYQPAESHASDVDVAAAPPSSKASVEFLTESQVVPVNPIQKMMVKAMNASLKVPHFGYADEIEMDALDELRQRLKVVASERGIKVTYLPLMIKAASLALKYYPVLNASVSDCEGFITLHAQHNISVAMDTPKGLLVPNIKNVESKSILDIAQELGRLQALASA--------GKLGPNDLTGGTFSLSNIGSIGGTYMGPVIMVPQVAIGAIGKIQTLPRFNAAG----------AVVPVKVMNVSWSGDHRIIDGATMARFSTKWKHFLENPTAMLSELK 479
[Close]
BLAST of NO10G02920 vs. NCBI_GenBank
Match: ETP50354.1 (hypothetical protein F442_04297 [Phytophthora parasitica P10297])

HSP 1 Score: 340.1 bits (871), Expect = 1.500e-89
Identity = 211/518 (40.73%), Postives = 277/518 (53.47%), Query Frame = 0 
Query:  111 MPFLLADIGEGIAEVELMQWFVQEGESIKQFDRVCEVQSDKATVEISSRYDGVVSRVHHPVGAVVKVGSALIDIEVARPNNHTAAATLAAAPTMNNADLPSPAMMAAAAPVTSPPLLPTVSLQQQPQHHLPQHKQSERASNINREGNRGDIVPATPAVRRWAKEYGVDLAFVRATGPQGRVLKGDVLNHISTRNGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSSPLSALHLTASQRVPIRGVMRQMVKSMNASLKIPHFGYQDEVCMDKAAAFRSSLRPLAEEQGLKFTYLPLMLKAASLALLRFPILNASLSEDEKEVVYHSSHEIGVAMATSKGLIVPVLRKVQEKSLMEIARELAVFQCKAEGQGGREGGQGGFKEEDFQGATFSLSNIGSLGGTYMDAKIVPPQVAIGAVGRIQMLPRYVQASEGEVGREGGPVVMPVRVMAISWAGDHRVVDGATMAKFSNLWKKYLEEPALMLAE 629
            +PF LADIGEGIAEVE++QWFV+ G+ +KQF  VCEVQSDKATVEI+SRYDG+V++VH+ VG + KVGS LIDI+V   +  TAAAT             +P       PV +                        R     R     + +  +P+VRR AKE+ +DL  V  TGPQGR+LKGD+L +I                                                                         +  +L     VP+  + + MVKSMNA+L+IPHFGY DE+ MD     R  L+PLAE +G+K +++P ++KAASLAL  +P+LNA+++E E E+   ++H I VAM T  GLIVP ++ VQ KS+MEIA +L   Q  A          G     D  G TFS+SNIGS+GGTY+   ++ PQVAIGA+G+IQ LPRY          +    V PVR+M +SW+GDHRV+DGATMA+FSN WK YLE P  ML E
Sbjct:   33 IPFKLADIGEGIAEVEVLQWFVKSGDEVKQFQNVCEVQSDKATVEITSRYDGIVTKVHYEVGEMAKVGSTLIDIDV---DEATAAATQGGGKKKG-----APIPRRTPTPVATXXXXXXXXXXXXXXXXXXXXXXXSRVPIAPRRLEGEEKLLTSPSVRRLAKEHNIDLHDVEGTGPQGRILKGDLLEYI--------------------------------------------RMLATQPSTPAPPAGQSTATAQPPAVDGSNTTYLQQDTVVPLTPIQKMMVKSMNAALQIPHFGYADEIRMDALYELRKELKPLAESRGVKLSFMPFIIKAASLALKHYPMLNATVNESETELTLVAAHNISVAMDTPTGLIVPNVKNVQAKSIMEIAEDLNRLQQLAVA--------GKLAPSDLTGGTFSISNIGSIGGTYLSPVLMVPQVAIGAIGQIQKLPRY----------DADGNVEPVRLMNVSWSGDHRVIDGATMARFSNQWKAYLETPVSMLTE 480
[Close]
BLAST of NO10G02920 vs. NCBI_GenBank
Match: XP_008873309.1 (hypothetical protein H310_09113 [Aphanomyces invadans] >ETV97748.1 hypothetical protein H310_09113 [Aphanomyces invadans])

HSP 1 Score: 340.1 bits (871), Expect = 1.500e-89
Identity = 218/527 (41.37%), Postives = 293/527 (55.60%), Query Frame = 0 
Query:  113 FLLADIGEGIAEVELMQWFVQEGESIKQFDRVCEVQSDKATVEISSRYDGVVSRVHHPVGAVVKVGSALIDI----EVARPNNHTAAATLAAA-----PTMNNADLPSPAMMAAAAPVTSPPLLPTVSLQQQPQHHLPQHKQSERASNINREGNRGDIVPATPAVRRWAKEYGVDLAFVRATGPQGRVLKGDVLNHISTRNGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSSPLSALHLTASQRVPIRGVMRQMVKSMNASLKIPHFGYQDEVCMDKAAAFRSSLRPLAEEQGLKFTYLPLMLKAASLALLRFPILNASLSEDEKEVVYHSSHEIGVAMATSKGLIVPVLRKVQEKSLMEIARELAVFQCKAEGQGGREGGQGGFKEEDFQGATFSLSNIGSLGGTYMDAKIVPPQVAIGAVGRIQMLPRYVQASEGEVGREGGPVVMPVRVMAISWAGDHRVVDGATMAKFSNLWKKYLEEPALMLAETR 631
            F LADIGEGIAEVE++QWFV+ G+ I QF  + EVQSDKATVEI+SR+DGVV+++H+ VG + KVGSALID+    E+A  +N  AA+   AA       +  A  P+P + +  APV   P  P VS+       + + K  +              V  TP+VRR A+E+ +DL  +   G   R+LKGD+LN+I   +                                                                 SS      LT SQ VP+  + + MVKSMNA+LK+PHFGY DE+ MD     R  L+ +A E+G+K TYLPLM+KAASLAL  +P+LN+S+SE E  +  H+ H I VAM T KGL+VP ++ V+ KS++EIA +L+  Q  A          G     D  G TFSLSNIGS+GGTYM   I+ PQVAIGA+G+IQ LPR+ +A E          V+PV++M +SW+GDHR++DGATMA+FS  WK +LE P  ML+E +
Sbjct:   34 FNLADIGEGIAEVEVLQWFVKPGDKISQFQNLVEVQSDKATVEITSRFDGVVTKLHYDVGGMAKVGSALIDLDVSDEIAAAHNAGAASKKPAAGAKKVEQLKKAATPTP-IKSLHAPVVPTPQAP-VSVAPASLSSIVRTKTGK--------------VLTTPSVRRLAREHNIDLEDIPVEG--DRILKGDILNYIRELS----------------------------------------EAKFQPAQAASQASAESSHEVAGTTSSSKGVEFLTESQVVPVNPIQKMMVKSMNAALKVPHFGYADEIEMDALDELRQRLKVVAAERGIKITYLPLMIKAASLALKYYPVLNSSVSECEGFITLHAHHNISVAMDTPKGLLVPNIKNVESKSILEIAEDLSRLQGLATA--------GKLGPNDLTGGTFSLSNIGSIGGTYMGPVIMVPQVAIGAIGKIQTLPRFNKAGE----------VVPVKIMNVSWSGDHRIIDGATMARFSTKWKNFLENPTSMLSELK 484
[Close]
BLAST of NO10G02920 vs. NCBI_GenBank
Match: ETM52214.1 (hypothetical protein L914_04151 [Phytophthora parasitica])

HSP 1 Score: 337.0 bits (863), Expect = 1.200e-88
Identity = 211/518 (40.73%), Postives = 276/518 (53.28%), Query Frame = 0 
Query:  111 MPFLLADIGEGIAEVELMQWFVQEGESIKQFDRVCEVQSDKATVEISSRYDGVVSRVHHPVGAVVKVGSALIDIEVARPNNHTAAATLAAAPTMNNADLPSPAMMAAAAPVTSPPLLPTVSLQQQPQHHLPQHKQSERASNINREGNRGDIVPATPAVRRWAKEYGVDLAFVRATGPQGRVLKGDVLNHISTRNGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSSPLSALHLTASQRVPIRGVMRQMVKSMNASLKIPHFGYQDEVCMDKAAAFRSSLRPLAEEQGLKFTYLPLMLKAASLALLRFPILNASLSEDEKEVVYHSSHEIGVAMATSKGLIVPVLRKVQEKSLMEIARELAVFQCKAEGQGGREGGQGGFKEEDFQGATFSLSNIGSLGGTYMDAKIVPPQVAIGAVGRIQMLPRYVQASEGEVGREGGPVVMPVRVMAISWAGDHRVVDGATMAKFSNLWKKYLEEPALMLAE 629
            +PF LADIGEGIAEVE++QWFV+ G+ +KQF  VCEVQSDKATVEI+SRYDG+V++VH+ VG + KVGS LIDI+V   +  TAAAT             +P       PV +                        R     R     + +  +P+VRR AKE+ +DL  V  TG QGR+LKGD+L +I                                                                         +  +L     VP+  + + MVKSMNA+L+IPHFGY DE+ MD     R  L+PLAE +G+K +++P ++KAASLAL  +P+LNA+++E E E+   ++H I VAM T  GLIVP ++ VQ KS+MEIA +L   Q  A          G     D  G TFS+SNIGS+GGTYM   ++ PQVAIGA+G+IQ LPRY          +    V PVR+M +SW+GDHRV+DGATMA+FSN WK YLE P  ML E
Sbjct:   33 IPFKLADIGEGIAEVEVLQWFVKSGDEVKQFQNVCEVQSDKATVEITSRYDGIVTKVHYEVGEMAKVGSTLIDIDV---DEATAAATQGGGKKKG-----APIPRRTPTPVATXXXXXXXXXXXXXXXXXXXXXXXSRVPIAPRRLEGEEKLLTSPSVRRLAKEHNIDLHDVEGTGLQGRILKGDLLEYI--------------------------------------------RMLATQPSTPAPPAGQSTATAQPPVVDGSNTTYLQQDTVVPLTPIQKMMVKSMNAALQIPHFGYADEIRMDALYELRKELKPLAESRGVKLSFMPFIIKAASLALKHYPMLNATVNESETELTLVAAHNISVAMDTPTGLIVPNVKNVQAKSIMEIAEDLNRLQQLAVA--------GKLAPSDLTGGTFSISNIGSIGGTYMSPVLMVPQVAIGAIGQIQKLPRY----------DADGNVEPVRLMNVSWSGDHRVIDGATMARFSNQWKAYLETPVSMLTE 480
The following BLAST results are available for this feature:
BLAST of NO10G02920 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM25504.17.500e-17163.96dihydrolipoamide branched chain transacylase e2 [N... [more]
GAX98690.12.800e-9345.86lipoamide acyltransferase component of branched-ch... [more]
XP_002909052.15.300e-9241.89lipoamide acyltransferase component of branched-ch... [more]
XP_008605774.12.900e-9041.12hypothetical protein SDRG_01993 [Saprolegnia dicli... [more]
ETI52610.16.500e-9040.93hypothetical protein F443_04331 [Phytophthora para... [more]
ETK92490.16.500e-9040.93hypothetical protein L915_04185 [Phytophthora para... [more]
XP_009829617.18.500e-9041.49hypothetical protein H257_06179 [Aphanomyces astac... [more]
ETP50354.11.500e-8940.73hypothetical protein F442_04297 [Phytophthora para... [more]
XP_008873309.11.500e-8941.37hypothetical protein H310_09113 [Aphanomyces invad... [more]
ETM52214.11.200e-8840.73hypothetical protein L914_04151 [Phytophthora para... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL052nonsL052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR004ncniR004Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR015ngnoR015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001162NSK001162Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO10G02920.1NO10G02920.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|418247gene_3910Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100032g33gene4999Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO10G02920.1NO10G02920.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO10G02920 ID=NO10G02920|Name=NO10G02920|organism=Nannochloropsis oceanica|type=gene|length=3017bp
ACACCCACAGTACCAGCCATGTTTGCCAGCGGCACCAGACGCAGTGTCTC
CCGCTTGGTGGCCACGTGCGCGCATCGTTGTTCCCGCAGCTCCCAGgtaa
gcaacagaacagatcaatttcagcgagtgcctttcctgtattaacactcc
tctctcgcgaccccaccagACATGGATCACAGGGGTGGCCAGGGGCTTGA
TCGGCGAAATCGGTACGAAAAATAGCATCACTGGTCATTTCAGGGGTACC
GGGGCCGTGGTCCTCCTCCCAAGCCGCGAGCAGCCGCCCCGAATTCAGCA
Ggtgagtgtcaaggataagcaggacgacgaaccttgccatcacaccagca
gcactgaccgaggcacccttatacacatacatactcaccatactcacagT
ATCGAGCCTCTTCTATGAGCGCGCTGGAGGAACCGCCCTACGACTACGTT
TCGTCCACGCCTTCCTCCACACCCTCACCACCTCCCGCTGCCTCCGCGCC
CAGCGGCGGCGGGAAGATCATGCCTTTCCTGCTAGCTGATATTGGGGAGG
GCATTGCCGAAGTGGAGCTCATGCAATGGTTTGTGCAAGAAGGGGAGAGC
ATTAAGCAGTTCGATAGGGTATGTGAGGTTCAATCGGACAAGGCCACGGT
TGAGATTTCCTCGCGCTACGACGGCGTTGTCTCGAGAGTGCATCACCCCG
TCGGGGCGGTTGTGAAAGTAGGGAGCGCCCTGATCGACATTGAAGTGGCA
AGACCAAACAACCACACCGCTGCCGCCACGCTCGCTGCGGCCCCCACCAT
GAACAACGCCGACCTCCCTTCTCCAGCCATGATGGCAGCAGCGGCTCCTG
TCACTTCTCCTCCATTGCTCCCAACGGTGTCTCTCCAGCAGCAGCCACAG
CATCATCTACCACAGCATAAGCAGTCAGAGAGGGCCAGTAATATTAATCG
TGAGGGTAACAGGGGGGATATTGTGCCTGCTACGCCCGCTGTCCGTCGGT
GGGCGAAAGAGTATGGCGTGGACTTGGCTTTTGTCCGAGCGACGGGGCCG
CAAGGCCGGGTCCTGAAGGGCGATGTCTTAAATCACATTAGCACACGCAA
CGGCGGTGGTGGCATTGGCATGCTGGCTACAACTGCTTCTACTTCTACTC
CTGCCGCTACAGCTGCTACTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTT
GCTCCATCTTCTCCCTCCTTTCAGCTGAACGGCGCTGCCACGGCCATGAA
AGCATCCTCCTCCTCCTCTCCCTCCTCATCTACTAACCCCCCCCATTCCT
CCCCTCTCTCCGCCTTGCACCTCACCGCCTCCCAGCGAGTGCCCATACGG
GGGGTGATGCGTCAGATGGTGAAGTCCATGAACGCCTCTCTGAAAATTCC
TCATTTCGGGTACCAAGACGAGGTATGCATGGACAAAGCCGCCGCGTTCC
GCTCCTCTCTCCGTCCCTTGGCAGAGGAGCAAGGCCTGAAATTCACGTAT
CTACCTCTGATGCTCAAGGCGGCAAGTTTGGCCCTGTTGAGATTCCCGAT
TCTGAATGCGAGCTTGTCGGAGGATGAGAAGGAGGTGGTGTATCACAGCT
CGCACGAAATAGGAGTGGCCATGGCAACGAGCAAAGGGCTGATTGTTCCC
GTCTTGCGGAAAGTTCAAGAGAAGTCCCTGATGGAGATCGCGAGGGAGTT
GGCCGTGTTTCAATGCAAGGCCGAGGGGCAGGGAGGGAGGGAAGGAGGAC
AGGGTGGGTTCAAAGAGGAGGATTTCCAGGGGGCCACATTCTCGCTGAGC
AATATTGGAAGCCTGGGGGGTACGTACATGGATGCTAAGATCGTTCCTCC
TCAAGTGGCGATAGGCGCGGTGGGGAGGATTCAGATGTTGCCGCGGTATG
TGCAGGCGTCCGAAGGGGAGGTAGGGAGGGAGGGAGGCCCTGTGGTGATG
CCGGTGAGGGTGATGGCTATTTCGTGGGCGGGGGATCATAGGGTGGTGGA
TGGGGCGACCATGGCAAAATTTTCGAATTTGTGGAAGAAGTATCTGGAAG
AGCCGGCGTTGATGTTGGCGGAAACGCGTTAAGAAGGAGGAGCAAGGGAG
GGAGACAGGGAGGAAGGGAGTGGAAGGAACGGATCAGTAGAGCTGCTACG
CTGGCCGACACGTTTCCAGGGAGAGATGGGGATGGAAAAGGAAGTGGAAG
GTCCGGACAGTGGGGCGAGGTTAGCGTGTTTCTTGCACCTCGGAGGTGTC
CTTATCTTTTGACCTCTCCTTTATCTGGTGATCATGTCCACGCTCGTTGA
TGGAGATACCAACGTACTTGGCGGCGGTTTGTTTGGATTTGAGAAAGACG
CCGTCGTCCTATGTGAGAGGAAAGAAGGGAAGAGGGATGGAAGGAGGGAA
GGTGGGAGGGAGGATGTAAAGTAGTGCAGTGAGTTGAAGGTTTGTTGTGT
TATTTGTCTCGGCAATTATGTGTACGGGGGGAAAGGGAGGGAAGGAGGTA
TCTCGTCTTTGTATATACGTGTGAAAAAAGAGGAAATTGAGAGACAGAGG
GATAATGTAGATATGTGTGTATGTGGGAGGAAAAAGGAATGAACCTAGCA
CTTAACTTTTCATTTGTTGTCGTGTACAATCATGTGAAGATGAGGAAGAA
AGAAAGGAAAAAAAAGAAGATAGAGTAAGGAAAATGGGAAGAAGAAGGGG
TGAGGAAGGAGAAGGAAGAGAGAGAAGGAGACATGAGTGTACGTAGATGA
CTGAGAGAAGATGATGTCACTTGTTCTTTACTCCTCCATTAGCATCCCGT
TATTTGTCAGTTGCTTGCTTGAAAAATAATATCAAATAGGAACACTAATA
CAGAATGTGTAATTTAGAAGAAAGAAACGAACGAAGGAAAAATATTGGCC
GTACTCCTTGTCCCTCCCACCTAGCTCTGGAGATAGACTTGGAAAAAAAG
TTTAACCCAGACGAGAGGAAACCTACCCACCATGTAGCAAAGAAAAGAAT
GAAATTATAGCGACTCA
back to top

protein sequence of NO10G02920.1

>NO10G02920.1-protein ID=NO10G02920.1-protein|Name=NO10G02920.1|organism=Nannochloropsis oceanica|type=polypeptide|length=631bp
MFASGTRRSVSRLVATCAHRCSRSSQTWITGVARGLIGEIGTKNSITGHF
RGTGAVVLLPSREQPPRIQQYRASSMSALEEPPYDYVSSTPSSTPSPPPA
ASAPSGGGKIMPFLLADIGEGIAEVELMQWFVQEGESIKQFDRVCEVQSD
KATVEISSRYDGVVSRVHHPVGAVVKVGSALIDIEVARPNNHTAAATLAA
APTMNNADLPSPAMMAAAAPVTSPPLLPTVSLQQQPQHHLPQHKQSERAS
NINREGNRGDIVPATPAVRRWAKEYGVDLAFVRATGPQGRVLKGDVLNHI
STRNGGGGIGMLATTASTSTPAATAATAAAAAAAAAVAPSSPSFQLNGAA
TAMKASSSSSPSSSTNPPHSSPLSALHLTASQRVPIRGVMRQMVKSMNAS
LKIPHFGYQDEVCMDKAAAFRSSLRPLAEEQGLKFTYLPLMLKAASLALL
RFPILNASLSEDEKEVVYHSSHEIGVAMATSKGLIVPVLRKVQEKSLMEI
ARELAVFQCKAEGQGGREGGQGGFKEEDFQGATFSLSNIGSLGGTYMDAK
IVPPQVAIGAVGRIQMLPRYVQASEGEVGREGGPVVMPVRVMAISWAGDH
RVVDGATMAKFSNLWKKYLEEPALMLAETR*
back to top
Synonyms
Publications