NO10G02770, NO10G02770 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO10G02770 vs. NCBI_GenBank
Match: EWM25529.1 (Mpv17/PMP22 [Nannochloropsis gaditana]) HSP 1 Score: 284.6 bits (727), Expect = 3.000e-73 Identity = 129/188 (68.62%), Postives = 155/188 (82.45%), Query Frame = 0 Query: 70 YSRLLREHPIKTKLLTSSFLMGAGDISCQFLTRCQKQQEHEQAQQANLSFLPLSLHPYDWHRTLKFFFLGGVVVGPALHHWYSFLVRFSPAQTTAGALKRLALDQLVFAPTFIPVFFSGLQFLDGNFDLKQLRGKLERDYVDTLVANYLLWVPAMLINFRLVPMQYQVLFSNAVGFGWNVFLSAVSHK 258 YSR L++HP+KTKLLTSSF+MGAGD++CQFLTR +KQQE P PYDW+RT KFF LGGV+VGPALHHWYSFL+R +P Q T+GALKRLA+DQ +FAP FIPVFFSGLQFLDGNFD+ QLR KL+RDY +TL+AN+ +W+PAM++NFR VP YQVL+SNAVGF WN+FLSA+SHK Sbjct: 61 YSRWLKDHPVKTKLLTSSFIMGAGDVACQFLTRYEKQQERATDLPNVARSSPTPTLPYDWYRTAKFFLLGGVLVGPALHHWYSFLIRLAPVQNTSGALKRLAVDQCIFAPAFIPVFFSGLQFLDGNFDMDQLRRKLKRDYKETLIANWAVWIPAMMVNFRFVPQHYQVLYSNAVGFCWNIFLSAISHK 248
BLAST of NO10G02770 vs. NCBI_GenBank
Match: XP_005854983.1 (protein Mpv17, partial [Nannochloropsis gaditana CCMP526] >XP_005855189.1 protein Mpv17, partial [Nannochloropsis gaditana CCMP526] >EKU21171.1 protein Mpv17, partial [Nannochloropsis gaditana CCMP526] >EKU21379.1 protein Mpv17, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 202.2 bits (513), Expect = 2.000e-48 Identity = 88/119 (73.95%), Postives = 106/119 (89.08%), Query Frame = 0 Query: 139 GGVVVGPALHHWYSFLVRFSPAQTTAGALKRLALDQLVFAPTFIPVFFSGLQFLDGNFDLKQLRGKLERDYVDTLVANYLLWVPAMLINFRLVPMQYQVLFSNAVGFGWNVFLSAVSHK 258 GGV+VGPALHHWYSFL+R +P Q T+GALKRLA+DQ +FAP FIPVFFSGLQFLDGNFD+ QLR KL+RDY +TL+AN+ +W+PAM++NFR VP YQVL+SNAVGF WN+FLSA+SHK Sbjct: 1 GGVLVGPALHHWYSFLIRLAPVQNTSGALKRLAVDQCIFAPAFIPVFFSGLQFLDGNFDMDQLRRKLKRDYKETLIANWAVWIPAMMVNFRFVPQHYQVLYSNAVGFCWNIFLSAISHK 119
BLAST of NO10G02770 vs. NCBI_GenBank
Match: CBN78013.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 162.2 bits (409), Expect = 2.300e-36 Identity = 87/199 (43.72%), Postives = 118/199 (59.30%), Query Frame = 0 Query: 70 YSRLLREHPIKTKLLTSSFLMGAGDISCQFLTRCQKQQEHEQAQQANLSFL----PLS-------LHPYDWHRTLKFFFLGGVVVGPALHHWYSFLVRFSPAQTTAGALKRLALDQLVFAPTFIPVFFSGLQFLDGNFDLKQLRGKLERDYVDTLVANYLLWVPAMLINFRLVPMQYQVLFSNAVGFGWNVFLSAVSHK 258 Y+ LL P+ TK +TS + AGD+SCQ L ++E E++ ++ L P DW RTL+F F+G VV PALH WY FL++ P A +KR+ALDQL+FAP F+ VF S + LDGN ++ KL DY TLV+N+ W+PA +INFR V YQVL++N VGF WN++LS S+K Sbjct: 2 YNSLLESRPLATKAVTSGAIAFAGDVSCQLLALEVAKREEEKSSAQDVDELEHHEPFGDGGARSVASEIDWGRTLRFTFVGAAVVAPALHAWYGFLIQRLPGTAPATVVKRVALDQLLFAPGFLAVFLSTVMLLDGN--AAKIDRKLRADYTTTLVSNWGYWIPAQVINFRFVAPVYQVLYANFVGFFWNIYLSYQSNK 198
BLAST of NO10G02770 vs. NCBI_GenBank
Match: ETI45948.1 (hypothetical protein F443_09589 [Phytophthora parasitica P1569]) HSP 1 Score: 148.7 bits (374), Expect = 2.600e-32 Identity = 78/189 (41.27%), Postives = 106/189 (56.08%), Query Frame = 0 Query: 70 YSRLLREHPIKTKLLTSSFLMGAGDISCQFLTRCQKQQEHEQAQQANLSFLPLSLHPYDWHRTLKFFFLGGVVVGPALHHWYSFLVRFSPAQTTAGALKRLALDQLVFAPTFIPVFFSGLQFLDGNFDLKQLRGKLERDYVDTLVANYLLWVPAMLINFRLVPMQYQVLFSNAVGFGWNVFLSAVSHKE 259 Y+ LL HP+ TK++T + G GD+ CQ + + E A+ D R F FLGG ++ PALH WY FL P +TA KRLALDQL FAPTF+P+ S + L+G+ + + KL D+ AN+++WVPA ++NFR VP QVLF+N +G WN +LS VSH E Sbjct: 45 YASLLETHPLSTKIVTGGAIAGLGDVGCQLVL----ESEDGDAK-------------LDLKRAAIFTFLGGFLISPALHVWYGFLGSRLPGVSTAAVAKRLALDQLGFAPTFLPIILSSVLMLEGHSE--DIPDKLRADWWSVTKANWVIWVPAQILNFRFVPGSMQVLFANVIGLLWNAYLSYVSHSE 214
BLAST of NO10G02770 vs. NCBI_GenBank
Match: ETL39355.1 (hypothetical protein L916_09288 [Phytophthora parasitica] >ETL92506.1 hypothetical protein L917_09221 [Phytophthora parasitica] >ETP15776.1 hypothetical protein F441_09521 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 148.7 bits (374), Expect = 2.600e-32 Identity = 79/189 (41.80%), Postives = 106/189 (56.08%), Query Frame = 0 Query: 70 YSRLLREHPIKTKLLTSSFLMGAGDISCQFLTRCQKQQEHEQAQQANLSFLPLSLHPYDWHRTLKFFFLGGVVVGPALHHWYSFLVRFSPAQTTAGALKRLALDQLVFAPTFIPVFFSGLQFLDGNFDLKQLRGKLERDYVDTLVANYLLWVPAMLINFRLVPMQYQVLFSNAVGFGWNVFLSAVSHKE 259 Y+ LL HP+ TK++T + G GD+ CQ + + E A+ D R F FLGG ++ PALH WY FL P +TA KRLALDQL FAPTF+P+ S + L+G+ + + KL D+ AN+++WVPA ++NFR VP QVLF+N VG WN +LS VSH E Sbjct: 45 YASLLETHPLSTKIVTGGAIAGLGDVGCQLVL----ESEDGDAK-------------LDLKRAAIFTFLGGFLISPALHVWYGFLGSRLPGVSTAAVAKRLALDQLGFAPTFLPIILSSVLMLEGHSE--DIPDKLRADWWSVTKANWVVWVPAQILNFRFVPGSMQVLFANVVGLLWNAYLSYVSHSE 214
BLAST of NO10G02770 vs. NCBI_GenBank
Match: XP_002908101.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY61184.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 148.7 bits (374), Expect = 2.600e-32 Identity = 78/189 (41.27%), Postives = 110/189 (58.20%), Query Frame = 0 Query: 70 YSRLLREHPIKTKLLTSSFLMGAGDISCQFLTRCQKQQEHEQAQQANLSFLPLSLHPYDWHRTLKFFFLGGVVVGPALHHWYSFLVRFSPAQTTAGALKRLALDQLVFAPTFIPVFFSGLQFLDGNFDLKQLRGKLERDYVDTLVANYLLWVPAMLINFRLVPMQYQVLFSNAVGFGWNVFLSAVSHKE 259 Y+ LL HP+KTK++T + G GD+ CQ + + E A+ D RT+ F FLGG+++ P LH WY FL P +T+ KRLALDQL FAPTF+P+ S + L+G+ + + KL D+ + AN+++WVPA ++NFR VP QV+FSN VG WN +LS VSH + Sbjct: 45 YASLLETHPLKTKIVTGGAIAGLGDVGCQLVL----EGEDGDAK-------------LDVKRTVIFTFLGGLLISPVLHVWYGFLGSRLPGVSTSAVAKRLALDQLGFAPTFLPIILSSVLTLEGH--AEDIPDKLRADWWPLMKANWVVWVPAQILNFRFVPGSMQVIFSNVVGLLWNSYLSYVSHSQ 214
BLAST of NO10G02770 vs. NCBI_GenBank
Match: ETK85947.1 (hypothetical protein L915_09384 [Phytophthora parasitica] >ETM45777.1 hypothetical protein L914_09245 [Phytophthora parasitica] >ETP43864.1 hypothetical protein F442_09495 [Phytophthora parasitica P10297]) HSP 1 Score: 148.3 bits (373), Expect = 3.400e-32 Identity = 78/189 (41.27%), Postives = 106/189 (56.08%), Query Frame = 0 Query: 70 YSRLLREHPIKTKLLTSSFLMGAGDISCQFLTRCQKQQEHEQAQQANLSFLPLSLHPYDWHRTLKFFFLGGVVVGPALHHWYSFLVRFSPAQTTAGALKRLALDQLVFAPTFIPVFFSGLQFLDGNFDLKQLRGKLERDYVDTLVANYLLWVPAMLINFRLVPMQYQVLFSNAVGFGWNVFLSAVSHKE 259 Y+ LL HP+ TK++T + G GD+ CQ + + E A+ D R F FLGG ++ PALH WY FL P +TA KRLALDQL FAPTF+P+ S + L+G+ + + KL D+ AN+++WVPA ++NFR VP QVLF+N +G WN +LS VSH E Sbjct: 45 YASLLETHPLSTKIVTGGAIAGLGDVGCQLVL----ESEDGDAK-------------LDLKRAAIFTFLGGFLISPALHVWYGFLGSRLPGVSTAAVAKRLALDQLGFAPTFLPIILSSVLMLEGHSE--DIPDKLRADWWSVTKANWVVWVPAQILNFRFVPGSMQVLFANVIGLLWNAYLSYVSHSE 214
BLAST of NO10G02770 vs. NCBI_GenBank
Match: XP_008906501.1 (hypothetical protein PPTG_12056 [Phytophthora parasitica INRA-310] >ETN08213.1 hypothetical protein PPTG_12056 [Phytophthora parasitica INRA-310] >KUF81518.1 SYM1 protein [Phytophthora nicotianae]) HSP 1 Score: 148.3 bits (373), Expect = 3.400e-32 Identity = 78/189 (41.27%), Postives = 106/189 (56.08%), Query Frame = 0 Query: 70 YSRLLREHPIKTKLLTSSFLMGAGDISCQFLTRCQKQQEHEQAQQANLSFLPLSLHPYDWHRTLKFFFLGGVVVGPALHHWYSFLVRFSPAQTTAGALKRLALDQLVFAPTFIPVFFSGLQFLDGNFDLKQLRGKLERDYVDTLVANYLLWVPAMLINFRLVPMQYQVLFSNAVGFGWNVFLSAVSHKE 259 Y+ LL HP+ TK++T + G GD+ CQ + + E A+ D R F FLGG ++ PALH WY FL P +TA KRLALDQL FAPTF+P+ S + L+G+ + + KL D+ AN+++WVPA ++NFR VP QVLF+N +G WN +LS VSH E Sbjct: 45 YASLLETHPLSTKIVTGGAIAGLGDVGCQLVL----ESEDGDAK-------------LDLKRAAIFTFLGGFLISPALHVWYGFLGSRLPGVSTAAVAKRLALDQLGFAPTFLPIILSSVLMLEGHSE--DIPDKLRADWWSVTKANWVVWVPAQILNFRFVPGSMQVLFANVIGLLWNAYLSYVSHSE 214
BLAST of NO10G02770 vs. NCBI_GenBank
Match: ETO74643.1 (hypothetical protein F444_09651 [Phytophthora parasitica P1976]) HSP 1 Score: 148.3 bits (373), Expect = 3.400e-32 Identity = 78/189 (41.27%), Postives = 106/189 (56.08%), Query Frame = 0 Query: 70 YSRLLREHPIKTKLLTSSFLMGAGDISCQFLTRCQKQQEHEQAQQANLSFLPLSLHPYDWHRTLKFFFLGGVVVGPALHHWYSFLVRFSPAQTTAGALKRLALDQLVFAPTFIPVFFSGLQFLDGNFDLKQLRGKLERDYVDTLVANYLLWVPAMLINFRLVPMQYQVLFSNAVGFGWNVFLSAVSHKE 259 Y+ LL HP+ TK++T + G GD+ CQ + + E A+ D R F FLGG ++ PALH WY FL P +TA KRLALDQL FAPTF+P+ S + L+G+ + + KL D+ AN+++WVPA ++NFR VP QVLF+N +G WN +LS VSH E Sbjct: 45 YASLLETHPLSTKIVTGGAIAGLGDVGCQLVL----ESEDGDAK-------------LDLKRAAIFTFLGGFLISPALHVWYGFLGSRLPGVSTAAVAKRLALDQLGFAPTFLPIILSSVLMLEGHSE--DIPDKLRADWWSVTKANWVVWVPAQILNFRFVPGSMQVLFANVIGLLWNAYLSYVSHSE 214
BLAST of NO10G02770 vs. NCBI_GenBank
Match: XP_024580203.1 (peroxisomal membrane mpv17 pmp22-like protein [Plasmopara halstedii] >CEG43834.1 peroxisomal membrane mpv17 pmp22-like protein [Plasmopara halstedii]) HSP 1 Score: 147.9 bits (372), Expect = 4.400e-32 Identity = 80/189 (42.33%), Postives = 104/189 (55.03%), Query Frame = 0 Query: 70 YSRLLREHPIKTKLLTSSFLMGAGDISCQFLTRCQKQQEHEQAQQANLSFLPLSLHPYDWHRTLKFFFLGGVVVGPALHHWYSFLVRFSPAQTTAGALKRLALDQLVFAPTFIPVFFSGLQFLDGNFDLKQLRGKLERDYVDTLVANYLLWVPAMLINFRLVPMQYQVLFSNAVGFGWNVFLSAVSHKE 259 Y+ LL HPI TK++T + G GD+ CQ + H + D RT F FLGGVV+ P LH WY FL P +TA KRLALDQL FAPTF+P+F S + L+G+ + + KL D+ N+++WVPA L NFR VP QVLFSN +G WN +LS +SH + Sbjct: 45 YASLLETHPISTKIVTGGTIAGLGDVGCQLF--LESDDGHAK---------------LDIKRTAIFTFLGGVVISPILHVWYRFLGSRLPGVSTAAITKRLALDQLGFAPTFLPIFLSSVLTLEGH--AEDIPDKLRSDWWPITKTNWVVWVPAQLFNFRFVPGSLQVLFSNVMGLFWNAYLSYMSHSK 214 The following BLAST results are available for this feature:
BLAST of NO10G02770 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO10G02770 ID=NO10G02770|Name=NO10G02770|organism=Nannochloropsis oceanica|type=gene|length=789bpback to top protein sequence of NO10G02770.1 >NO10G02770.1-protein ID=NO10G02770.1-protein|Name=NO10G02770.1|organism=Nannochloropsis oceanica|type=polypeptide|length=263bpback to top Synonyms
Publications
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