NO10G02560, NO10G02560 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO10G02560 vs. NCBI_GenBank
Match: XP_005854067.1 (ubiquitin-conjugating enzyme e2 8, partial [Nannochloropsis gaditana CCMP526] >EKU22292.1 ubiquitin-conjugating enzyme e2 8, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 208.4 bits (529), Expect = 4.200e-50 Identity = 119/272 (43.75%), Postives = 155/272 (56.99%), Query Frame = 0 Query: 48 RALIRIKKELQQNELPPNCTVQLWGG------------EASSSPT--SNLLHLRVSMLGPPGSFFEGETLHFELDIPLAYPFKAPHVTCHSRCWHPNICPDSGLVALSILGEHWRPTLSLSILIYGLQLALVEPNLDVTVNMAAADTYTHNPERFHRQVRDVLNGHGAWGLGNSSNSRTSSSRGDTSWRDGEREGIRPLMPACGAVTGVGGLIPPRGRGIVVEPNRSNIXXXXXXXXXXXXXXYACGSVRKRKLLHQMEPPEQGLEAMCIDD 306 RA+IR+KKELQQ+ELPPNC+VQ W + S++P LLH +V+MLGP S FEG L FEL++P +YPFK P VTCHS CWHPN+C +G V L I+GE WRPTLSLS LI+G+ LAL+E N+DV VN AAA+ Y H+ + +H Q R++L G RTS+ GD + G P +P+ + + P G + C S RKRK L++ EPPE+GLEAMCID+ Sbjct: 87 RAVIRVKKELQQSELPPNCSVQPWASRKFGTKQCNADPKCSNAPVDFQKLLHWQVTMLGPRESPFEGVPLLFELEVPPSYPFKPPRVTCHSCCWHPNVCASTGQVILPIIGEDWRPTLSLSTLIFGIHLALLEANVDVAVNSAAAEAYVHHTDLYHAQAREMLKGQAV--------RRTSA--GD---KRGRTTSTLPELPSFASHPAAEAISVPSGSSASTSMD-----------TLVSTCELDC-SARKRKALNETEPPERGLEAMCIDE 333
BLAST of NO10G02560 vs. NCBI_GenBank
Match: EWM25474.1 (ubiquitin-conjugating enzyme e2-17 kda [Nannochloropsis gaditana]) HSP 1 Score: 208.4 bits (529), Expect = 4.200e-50 Identity = 119/272 (43.75%), Postives = 155/272 (56.99%), Query Frame = 0 Query: 48 RALIRIKKELQQNELPPNCTVQLWGG------------EASSSPT--SNLLHLRVSMLGPPGSFFEGETLHFELDIPLAYPFKAPHVTCHSRCWHPNICPDSGLVALSILGEHWRPTLSLSILIYGLQLALVEPNLDVTVNMAAADTYTHNPERFHRQVRDVLNGHGAWGLGNSSNSRTSSSRGDTSWRDGEREGIRPLMPACGAVTGVGGLIPPRGRGIVVEPNRSNIXXXXXXXXXXXXXXYACGSVRKRKLLHQMEPPEQGLEAMCIDD 306 RA+IR+KKELQQ+ELPPNC+VQ W + S++P LLH +V+MLGP S FEG L FEL++P +YPFK P VTCHS CWHPN+C +G V L I+GE WRPTLSLS LI+G+ LAL+E N+DV VN AAA+ Y H+ + +H Q R++L G RTS+ GD + G P +P+ + + P G + C S RKRK L++ EPPE+GLEAMCID+ Sbjct: 26 RAVIRVKKELQQSELPPNCSVQPWASRKFGTKQCNADPKCSNAPVDFQKLLHWQVTMLGPRESPFEGVPLLFELEVPPSYPFKPPRVTCHSCCWHPNVCASTGQVILPIIGEDWRPTLSLSTLIFGIHLALLEANVDVAVNSAAAEAYVHHTDLYHAQAREMLKGQAV--------RRTSA--GD---KRGRTTSTLPELPSFASHPAAEAISVPSGSSASTSMD-----------TLVSTCELDC-SARKRKALNETEPPERGLEAMCIDE 272
BLAST of NO10G02560 vs. NCBI_GenBank
Match: CBN78289.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 111.3 bits (277), Expect = 7.000e-21 Identity = 73/177 (41.24%), Postives = 97/177 (54.80%), Query Frame = 0 Query: 49 ALIRIKK---ELQQNELPPNCTVQLWGGEASSS-----PTSNLLHLRVSMLGPPGSFFEGETLHFELDIPLAYPFKAPHVTCHSRCWHPNICPDSGLVALSILGEHWRPTLSLSILIYGLQLALVEPNLDVTVNMAAADTYTHNPERFHRQVRDVLNGHGAWGLGNSSNSRTSSSRG 218 A +R+KK EL Q+ L N T AS+S T NLL L+V + G FEG T +F L IP +YPF AP V C SR WHPNI +GLV+L IL + WRP LS++ +++ LQL +EP VN AA + NP+ F QVR L G +G+ S+ ++ G Sbjct: 8 AALRVKKDIAELSQHRL--NAT------HASTSIDFPDGTRNLLKLKVGVSMTAG-LFEGATFYFILTIPPSYPFHAPTVVCTSRAWHPNIDLHTGLVSLPILTKDWRPVLSINTVVFALQLMFIEPTEHYAVNKPAAAALSSNPDLFREQVRRSLAGGSLFGVQFESHRLGGTADG 175
BLAST of NO10G02560 vs. NCBI_GenBank
Match: XP_008878229.1 (hypothetical protein H310_12806 [Aphanomyces invadans] >ETV93207.1 hypothetical protein H310_12806 [Aphanomyces invadans]) HSP 1 Score: 107.8 bits (268), Expect = 7.800e-20 Identity = 52/126 (41.27%), Postives = 76/126 (60.32%), Query Frame = 0 Query: 80 TSNLLHLRVSM-LGPPGSFFEGETLHFELDIPLAYPFKAPHVTCHSRCWHPNICPDSGLVALSILGEHWRPTLSLSILIYGLQLALVEPNLDVTVNMAAADTYTHNPERFHRQVRDVLNGHGAWGL 205 T N+LH+ +S+ +G S + F+ DIP YPF AP V + WHPNI ++G V SILG WRP LS++ ++ GLQL +EP+++ VN AA T ++P+ F RQV+ L G +G+ Sbjct: 53 TGNILHILISISVGDVDSPYANGDFRFQFDIPRTYPFHAPVVKSLDKIWHPNIDINTGQVMFSILGNDWRPVLSINTILLGLQLIFLEPSIEFAVNQVAATTLVNDPQLFRRQVQHTLCGGAIYGV 178
BLAST of NO10G02560 vs. NCBI_GenBank
Match: POM68970.1 (Ubiquitin-conjugating enzyme E2 [Phytophthora palmivora var. palmivora]) HSP 1 Score: 106.7 bits (265), Expect = 1.700e-19 Identity = 57/158 (36.08%), Postives = 88/158 (55.70%), Query Frame = 0 Query: 49 ALIRIKKELQQNELPPNCTVQLWGGEASSSPTSNLLHL--RVSMLGPPGSFFEGETLHFELDIPLAYPFKAPHVTCHSRCWHPNICPDSGLVALSILGEHWRPTLSLSILIYGLQLALVEPNLDVTVNMAAADTYTHNPERFHRQVRDVLNGHGAWGL 205 A +R++K++ + Q N+L L +S+ G + G+ F ++IP YPF AP V C +R WHPNI +G V +SILG+ WRP LS++ ++ GLQL +EPN+D +N AAA+ NPE+F R+ + +L G +G+ Sbjct: 8 AALRVRKDVNELAKAKFTCAQAKTRVEFPDGVENMLRLIFMISIADISGPYANGDFTFF-VEIPKTYPFHAPSVRCLTRVWHPNIEMATGKVMMSILGKDWRPVLSINTVLLGLQLIFLEPNVDYVLNPAAAEQLHQNPEQFKRETQQILCGGRFYGI 164
BLAST of NO10G02560 vs. NCBI_GenBank
Match: XP_008901696.1 (hypothetical protein PPTG_08730 [Phytophthora parasitica INRA-310] >ETI52432.1 hypothetical protein F443_04404 [Phytophthora parasitica P1569] >ETL98888.1 hypothetical protein L917_04127 [Phytophthora parasitica] >ETM52040.1 hypothetical protein L914_04229 [Phytophthora parasitica] >ETN12639.1 hypothetical protein PPTG_08730 [Phytophthora parasitica INRA-310] >ETP50169.1 hypothetical protein F442_04432 [Phytophthora parasitica P10297] >KUF79299.1 NEDD8-conjugating enzyme Ubc12 [Phytophthora nicotianae] >KUF86715.1 NEDD8-conjugating enzyme Ubc12 [Phytophthora nicotianae]) HSP 1 Score: 105.9 bits (263), Expect = 3.000e-19 Identity = 57/158 (36.08%), Postives = 88/158 (55.70%), Query Frame = 0 Query: 49 ALIRIKKELQQNELPPNCTVQLWGGEASSSPTSNLLHL--RVSMLGPPGSFFEGETLHFELDIPLAYPFKAPHVTCHSRCWHPNICPDSGLVALSILGEHWRPTLSLSILIYGLQLALVEPNLDVTVNMAAADTYTHNPERFHRQVRDVLNGHGAWGL 205 A +R++K++ + Q +N+L L +S++ G F G+ F +DIP YPF AP V C +R WHPNI +G V + ILG+ WRP LS++ ++ GLQL +EP +D +N AAA+ NPE+F +V+ +L G +G+ Sbjct: 8 AALRVRKDVNELAKAKFTCAQARTRVEFPDGANNMLQLIFTISIIDLSGPFANGDFTFF-VDIPKTYPFHAPSVRCLTRVWHPNIDIATGKVMMPILGKDWRPVLSINTVLLGLQLIFLEPGIDYILNPAAAEQLHRNPEQFKNEVQQILCGGRFYGV 164
BLAST of NO10G02560 vs. NCBI_GenBank
Match: ETK92309.1 (hypothetical protein L915_04287 [Phytophthora parasitica] >ETL45700.1 hypothetical protein L916_04247 [Phytophthora parasitica] >ETP22253.1 hypothetical protein F441_04378 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 105.9 bits (263), Expect = 3.000e-19 Identity = 57/158 (36.08%), Postives = 88/158 (55.70%), Query Frame = 0 Query: 49 ALIRIKKELQQNELPPNCTVQLWGGEASSSPTSNLLHL--RVSMLGPPGSFFEGETLHFELDIPLAYPFKAPHVTCHSRCWHPNICPDSGLVALSILGEHWRPTLSLSILIYGLQLALVEPNLDVTVNMAAADTYTHNPERFHRQVRDVLNGHGAWGL 205 A +R++K++ + Q +N+L L +S++ G F G+ F +DIP YPF AP V C +R WHPNI +G V + ILG+ WRP LS++ ++ GLQL +EP +D +N AAA+ NPE+F +V+ +L G +G+ Sbjct: 123 AALRVRKDVNELAKAKFTCAQARTRVEFPDGANNMLQLIFTISIIDLSGPFANGDFTFF-VDIPKTYPFHAPSVRCLTRVWHPNIDIATGKVMMPILGKDWRPVLSINTVLLGLQLIFLEPGIDYILNPAAAEQLHRNPEQFKNEVQQILCGGRFYGV 279
BLAST of NO10G02560 vs. NCBI_GenBank
Match: ETO81216.1 (hypothetical protein F444_04427 [Phytophthora parasitica P1976]) HSP 1 Score: 105.9 bits (263), Expect = 3.000e-19 Identity = 57/158 (36.08%), Postives = 88/158 (55.70%), Query Frame = 0 Query: 49 ALIRIKKELQQNELPPNCTVQLWGGEASSSPTSNLLHL--RVSMLGPPGSFFEGETLHFELDIPLAYPFKAPHVTCHSRCWHPNICPDSGLVALSILGEHWRPTLSLSILIYGLQLALVEPNLDVTVNMAAADTYTHNPERFHRQVRDVLNGHGAWGL 205 A +R++K++ + Q +N+L L +S++ G F G+ F +DIP YPF AP V C +R WHPNI +G V + ILG+ WRP LS++ ++ GLQL +EP +D +N AAA+ NPE+F +V+ +L G +G+ Sbjct: 123 AALRVRKDVNELAKAKFTCAQARTRVEFPDGANNMLQLIFTISIIDLSGPFANGDFTFF-VDIPKTYPFHAPSVRCLTRVWHPNIDIATGKVMMPILGKDWRPVLSINTVLLGLQLIFLEPGIDYILNPAAAEQLHRNPEQFKNEVQQILCGGRFYGV 279
BLAST of NO10G02560 vs. NCBI_GenBank
Match: XP_002958085.1 (hypothetical protein VOLCADRAFT_109434 [Volvox carteri f. nagariensis] >EFJ40816.1 hypothetical protein VOLCADRAFT_109434 [Volvox carteri f. nagariensis]) HSP 1 Score: 104.4 bits (259), Expect = 8.600e-19 Identity = 52/147 (35.37%), Postives = 84/147 (57.14%), Query Frame = 0 Query: 51 IRIKKELQQNELPPNCTVQLWGGEASSSPTSNLLHLRVSMLGPPGSFFEGETLHFELDIPLAYPFKAPHVTCHSRCWHPNICPDSGLVALSILGEHWRPTLSLSILIYGLQLALVEPNLDVTVNMAAADTYTHNPERFHRQVRDVLN 198 +RI+K++ + LPPN T+ G+ L+H ++ + P + G +FE +IP YP AP V C ++ +HPNI + G + L+IL E W+P LS+S +IYGLQ ++PN D +N AA + NP +F + V+ ++ Sbjct: 32 LRIQKDMAELNLPPNITISFPDGK------DKLMHFFIA-IRPDEGIYRGGKFNFEFNIPTGYPHDAPKVLCTTKVYHPNIDLE-GKICLNILREDWKPVLSISSVIYGLQFLFLDPNPDDPLNKEAAQMFVDNPRQFEQYVQRAIH 170
BLAST of NO10G02560 vs. NCBI_GenBank
Match: XP_002902218.1 (ubiquitin-conjugating enzyme E2, putative [Phytophthora infestans T30-4] >EEY56890.1 ubiquitin-conjugating enzyme E2, putative [Phytophthora infestans T30-4]) HSP 1 Score: 104.4 bits (259), Expect = 8.600e-19 Identity = 61/175 (34.86%), Postives = 95/175 (54.29%), Query Frame = 0 Query: 49 ALIRIKKELQQNELPPNCTVQLWGGEASSSPTSNLLHL--RVSMLGPPGSFFEGETLHFELDIPLAYPFKAPHVTCHSRCWHPNICPDSGLVALSILGEHWRPTLSLSILIYGLQLALVEPNLDVTVNMAAADTYTHNPERFHRQVRDVLNGHGAWGLGNSSNSRTSSSRGDTSW 222 A +R++K++ + Q +N+L L +S++ G F G+ F +DIP YPF AP V C +R WHPNI +G V + ILG+ WRP LS++ ++ GLQL +EP +D +N AAA+ NPE+F ++V+ +L G +G+ ++ R R SW Sbjct: 8 AALRVRKDVNELAKAKFTCAQARTRVEFPDGANNMLKLIFTISIMDLSGPFANGDFTFF-VDIPKTYPFHAPSVRCLTRVWHPNIDIATGEVMMPILGKDWRPVLSINTVLLGLQLIFLEPGIDYVLNPAAAEQLHRNPEQFKKEVQHILCGGRFYGVDFLAHPRQLEMRRQ-SW 180 The following BLAST results are available for this feature:
BLAST of NO10G02560 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20 Position : 0 Zoom : x 1
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO10G02560 ID=NO10G02560|Name=NO10G02560|organism=Nannochloropsis oceanica|type=gene|length=1215bpback to top protein sequence of NO10G02560.1 >NO10G02560.1-protein ID=NO10G02560.1-protein|Name=NO10G02560.1|organism=Nannochloropsis oceanica|type=polypeptide|length=405bpback to top Synonyms
Publications
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