NO10G02460, NO10G02460 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO10G02460 vs. NCBI_GenBank
Match: OEU09594.1 (myosin Va, partial [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 197.6 bits (501), Expect = 4.300e-47 Identity = 103/228 (45.18%), Postives = 140/228 (61.40%), Query Frame = 0 Query: 4 NSFEQLCINAANEELQQQSNQFVFRLEQEEYEREDISWNFVSFSDNQECLDLIEKRGTVVWAVLDEQCVVRTKAPDTSFAHRLYEVSKNHPRFTATSRDHVDCRFRVRHYAGEVVYDTGGFLEKNKDQLYQEIVDLLRSSRCALVQSLSSDIEVAKSTTRYTSNNSLDFFSSSTGVDATKRRSAVVRPTVASQFKGQLALLLQRVYSTRPHYVRCLEPNDCNIPSAFD 232 NS+EQLCIN NE LQQQ N+FVF+LEQ EYE+E I W+F+ F DNQ+ LDLIE + + ++LDE+C + DT+F +YE K HPRF+AT + F + HYAG V YD+ FLEKNKD+L +E +LL SS + L + T ++ D +S + + S+++R TV SQF QL L R+ ST PHYVRCL+PND +P+ F+ Sbjct: 402 NSYEQLCINYCNEALQQQFNKFVFKLEQHEYEQEGIDWSFIEFPDNQDILDLIENKREGILSILDEKCRL-ASCTDTTFCRAIYEKCKKHPRFSATQSQIANFEFSIEHYAGTVTYDSANFLEKNKDELPKETTELLASSSVRFLAYLGETLNEEDEPTSASAKAFADRDGTSDTNNRKRNNSSILRTTVGSQFSRQLRELRDRIDSTSPHYVRCLKPNDDLVPNQFE 628
BLAST of NO10G02460 vs. NCBI_GenBank
Match: GBG34344.1 (Myosin-6 [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 197.6 bits (501), Expect = 4.300e-47 Identity = 109/220 (49.55%), Postives = 143/220 (65.00%), Query Frame = 0 Query: 4 NSFEQLCINAANEELQQQSNQFVFRLEQEEYEREDISWNFVSFSDNQECLDLIEKRGTVVWAVLDEQCVVRTKAPDTSFAHRLYEVSKNHPRFTATSRDHVDCRFRVRHYAGEVVYDTGGFLEKNKDQLYQEIVDLLRSSRCALVQSLSSDIEVAKSTTRYTSNNSLDFFSSSTGVDATKRRSAVVRPTVASQFKGQLALLLQRVYSTRPHYVRCLEPND 224 NSFEQLCIN ANE LQQQ NQFVF+LEQ+EYE+E I W+F+ F DNQ+CLDLIE + + ++LDEQC+ + D S A R YE+ + PRF+ +RD V+ RF + HYAG+V YDT GF+ KNKDQLY E ++L++SS+ + +L E+A S G RS + T+ SQFK QL+ LL+ + ST PHYVRCL+PND Sbjct: 503 NSFEQLCINYANETLQQQFNQFVFKLEQKEYEKEKIKWSFIDFPDNQQCLDLIESKPIGIISLLDEQCLF-PRGNDRSLAGRFYELLSDVPRFSVANRDRVNYRFTIEHYAGDVTYDTAGFVAKNKDQLYPESLELMQSSQDPFL-ALLFPTEMA-----------------SAGAGRNNGRS-IQSKTLGSQFKDQLSDLLKTIRSTSPHYVRCLKPND 702
BLAST of NO10G02460 vs. NCBI_GenBank
Match: ACS35545.1 (myosin I [Phaeodactylum tricornutum]) HSP 1 Score: 192.2 bits (487), Expect = 1.800e-45 Identity = 107/228 (46.93%), Postives = 143/228 (62.72%), Query Frame = 0 Query: 4 NSFEQLCINAANEELQQQSNQFVFRLEQEEYEREDISWNFVSFSDNQECLDLIEKRGTVVWAVLDEQCVVRTKAPDTSFAHRLYEVSKNHPRFTATSRDHVDCRFRVRHYAGEVVYDTGGFLEKNKDQLYQEIVDLLRSSRCALVQSLSSDIEVAKSTTRYTSNNSLDFFSSSTGVDATKRRSAVVRPTVASQFKGQLALLLQRVYSTRPHYVRCLEPNDCNIPSAFD 232 NSFEQLCIN NE LQQQ N+FVF+LEQ+EY +E I W+F++F DNQ+ LDLIEKR + +VLDEQ + + D SFA +YE HPRF ++ F ++HYAG V Y+T FLEKN+D L +E +LL SS + L I KS SN+++ S + S+++R +V SQF QL LL +R+ ST PHYVRCL+PND +P++FD Sbjct: 554 NSFEQLCINYCNEALQQQFNRFVFKLEQQEYHKEGIDWSFIAFPDNQDVLDLIEKRHDGILSVLDEQSRL-GRCTDKSFAQAIYEKCGAHPRFESSKSQQAILAFGIQHYAGSVEYNTANFLEKNRDDLPKETTELLMSSSNPFLVGLGK-ILCEKSVALNASNSAM---SRGNRKQLQRAASSILRDSVGSQFSSQLQLLRKRIESTAPHYVRCLKPNDDLVPNSFD 776
BLAST of NO10G02460 vs. NCBI_GenBank
Match: GAX27212.1 (hypothetical protein FisN_13Lh232 [Fistulifera solaris]) HSP 1 Score: 192.2 bits (487), Expect = 1.800e-45 Identity = 109/231 (47.19%), Postives = 141/231 (61.04%), Query Frame = 0 Query: 2 QKNSFEQLCINAANEELQQQSNQFVFRLEQEEYEREDISWNFVSFSDNQECLDLIEKRGTVVWAVLDEQCVVRTKAP-DTSFAHRLYEVSKNHPRFTATSRDHVDCRFRVRHYAGEVVYDTGGFLEKNKDQLYQEIVDLLRSSRCALVQSLSSDIEVAKSTTRYTSNNSLDFFSSSTGVDATKRRSAVVRPTVASQFKGQLALLLQRVYSTRPHYVRCLEPNDCNIPSAFD 232 Q NSFEQLCIN NE LQQQ N FV + EQ YE+E I W+F+ F +NQ+ LDLIEKRGT ++++LD+QC R P D +FA LY K PRF+A+ + + +F V HYAG V Y T GF+EKNKD L +EI++LL++S VQ L+ +E T R T N F + S V R TV QF+ QL L ++ T PHY+RCL+PND IP +D Sbjct: 638 QTNSFEQLCINFCNEALQQQFNAFVLKNEQAIYEKEGIEWSFIEFPENQDVLDLIEKRGTGIFSILDDQC--RAPGPSDKAFAINLYNQCKGLPRFSASRKQTANLQFAVSHYAGPVEYSTAGFVEKNKDDLPKEIIELLKTSSLPFVQDLAFIME-GDVTERSTDKNGAKF---------QRHGSFVGRATVGGQFRNQLRDLRDKIGLTNPHYIRCLKPNDQLIPDVYD 856
BLAST of NO10G02460 vs. NCBI_GenBank
Match: GAX27673.1 (hypothetical protein FisN_13Hh232 [Fistulifera solaris]) HSP 1 Score: 190.7 bits (483), Expect = 5.300e-45 Identity = 108/231 (46.75%), Postives = 141/231 (61.04%), Query Frame = 0 Query: 2 QKNSFEQLCINAANEELQQQSNQFVFRLEQEEYEREDISWNFVSFSDNQECLDLIEKRGTVVWAVLDEQCVVRTKAP-DTSFAHRLYEVSKNHPRFTATSRDHVDCRFRVRHYAGEVVYDTGGFLEKNKDQLYQEIVDLLRSSRCALVQSLSSDIEVAKSTTRYTSNNSLDFFSSSTGVDATKRRSAVVRPTVASQFKGQLALLLQRVYSTRPHYVRCLEPNDCNIPSAFD 232 Q NSFEQLCIN NE LQQQ N FV + EQ YE+E I W+F+ F +NQ+ LDLIEKRGT ++++LD+QC R P D +FA LY K PRF+A+ + + +F V HYAG V Y T GF+EKNKD L +EI++LL++S VQ L+ +E T + T N F + S V R TV QF+ QL L ++ T PHY+RCL+PND IP +D Sbjct: 639 QTNSFEQLCINFCNEALQQQFNAFVLKNEQAIYEKEGIEWSFIEFPENQDVLDLIEKRGTGIFSILDDQC--RAPGPSDKAFAINLYNQCKGLPRFSASRKQTANLQFAVSHYAGPVEYSTDGFVEKNKDDLPKEIIELLKTSSLPFVQDLAFIME-GDVTEKSTDKNGAKF---------QRHGSFVGRATVGGQFRNQLRDLRDKIGLTNPHYIRCLKPNDQLIPDVYD 857
BLAST of NO10G02460 vs. NCBI_GenBank
Match: GAX15266.1 (hypothetical protein FisN_1Hh703 [Fistulifera solaris]) HSP 1 Score: 189.1 bits (479), Expect = 1.500e-44 Identity = 103/228 (45.18%), Postives = 142/228 (62.28%), Query Frame = 0 Query: 4 NSFEQLCINAANEELQQQSNQFVFRLEQEEYEREDISWNFVSFSDNQECLDLIEKRGTVVWAVLDEQCVVRTKAPDTSFAHRLYEVSKNHPRFTATSRDHVDCRFRVRHYAGEVVYDTGGFLEKNKDQLYQEIVDLLRSSRCALVQSLSSDIEVAKSTTRYTSNNSLDFFSSSTGVDATKRRSAVVRPTVASQFKGQLALLLQRVYSTRPHYVRCLEPNDCNIPSAFD 232 NSFEQLCIN NE LQQQ N+FVF+LEQ+EY++E I W+F+SF DNQ+ LDLIEK+ + ++LDEQ + + D++FA +YE + RF AT C F + HYAG V YDT FLEKNKD+L +E +LL +S L+ +L D+E + +S S + S+++R +V +QF+ QL L R+ ST PHYVRCL+PND +P F+ Sbjct: 450 NSFEQLCINYCNEALQQQFNRFVFKLEQQEYQKEGIEWSFISFPDNQDILDLIEKKHGGILSILDEQSRL-PRCTDSTFAQAVYEKCDGNVRFEATKSQQAVCTFSIDHYAGLVEYDTMNFLEKNKDELPKETTELLCTSSHPLLATLGRDLE------SESDEHSSSSVPKSRSKVLQRSSSSILRESVGTQFRAQLLALRSRIESTNPHYVRCLKPNDDLVPQNFN 670
BLAST of NO10G02460 vs. NCBI_GenBank
Match: ACS35544.1 (myosin H [Phaeodactylum tricornutum]) HSP 1 Score: 188.3 bits (477), Expect = 2.600e-44 Identity = 108/231 (46.75%), Postives = 135/231 (58.44%), Query Frame = 0 Query: 2 QKNSFEQLCINAANEELQQQSNQFVFRLEQEEYEREDISWNFVSFSDNQECLDLIEKRGTVVWAVLDEQCVVRTKAP-DTSFAHRLYEVSKNHPRFTATSRDHVDCRFRVRHYAGEVVYDTGGFLEKNKDQLYQEIVDLLRSSRCALVQSLSSDIEVAKSTTRYTSNNSLDFFSSSTGVDATKRRSAVVRPTVASQFKGQLALLLQRVYSTRPHYVRCLEPNDCNIPSAFD 232 Q NSFEQLCIN NE LQQQ N FV R EQ EYE+E I W F+ F +NQ+ LDLI+KRG + +LD+QC R P DTSF ++Y++ N RF+AT +F V HYAG V Y GF EKN+D+L L SS VQ L+ +E A ++ S S+ F S S V RPTVA QF+ QL L ++ T PHY+RCL+PNDC +P FD Sbjct: 653 QVNSFEQLCINYCNEALQQQFNAFVLRNEQAEYEKEGILWKFIEFPENQDVLDLIDKRGIGILHILDDQC--RAPGPSDTSFGLQVYQMCANSSRFSATRAQKAHLQFAVHHYAGPVTYTAKGFTEKNRDELPTSTRTLFLSSESTFVQQLAHILEWAPNSNASASAFSVRSFQRSD--------STVGRPTVAGQFQRQLKKLRSKIDQTSPHYIRCLKPNDCLLPDKFD 873
BLAST of NO10G02460 vs. NCBI_GenBank
Match: XP_024397400.1 (myosin-1-like [Physcomitrella patens] >AEM05967.1 myosin VIII B [Physcomitrella patens] >PNR39427.1 hypothetical protein PHYPA_019705 [Physcomitrella patens]) HSP 1 Score: 188.3 bits (477), Expect = 2.600e-44 Identity = 102/231 (44.16%), Postives = 144/231 (62.34%), Query Frame = 0 Query: 2 QKNSFEQLCINAANEELQQQSNQFVFRLEQEEYEREDISWNFVSFSDNQECLDLIEKRGTVVWAVLDEQCVVRTKAPDTSFAHRLYEVSKNHPRFTATSRDHVDCRFRVRHYAGEVVYDTGGFLEKNKDQLYQEIVDLLRSSRCALVQSLSSDIEVAKSTTRYTSNNSLDFFSSSTGVDATKRRSAVVRPTVASQFKGQLALLLQRVYSTRPHYVRCLEPNDCNIPSAFDE 233 ++NSFEQLCIN ANE LQQ N+ +F+LEQEEY EDI W + F DNQ+CLDLIEKR + ++LDE+C+ +A D + A++L K+H + A+ R D +FRV HYAGEV+Y+ GFLEKN+D L+ ++V+LL S CAL+ DF +S+ S + +VAS+FKGQL LLQR+ +T PH++RC++PN +P+ D+ Sbjct: 679 KRNSFEQLCINYANERLQQHFNRHLFKLEQEEYTSEDIDWTRIEFQDNQQCLDLIEKRPVGLISLLDEECMF-PRATDFTLANKL----KDHLKKNASFRGERDKKFRVYHYAGEVLYEADGFLEKNRDLLHADLVELLESCDCALI---------------------FDFLASAGQGSGKSNGSEYQKQSVASKFKGQLNKLLQRLEATEPHFIRCIKPNTQQLPNVIDQ 883
BLAST of NO10G02460 vs. NCBI_GenBank
Match: EJK44080.1 (hypothetical protein THAOC_37413 [Thalassiosira oceanica]) HSP 1 Score: 188.3 bits (477), Expect = 2.600e-44 Identity = 102/230 (44.35%), Postives = 138/230 (60.00%), Query Frame = 0 Query: 2 QKNSFEQLCINAANEELQQQSNQFVFRLEQEEYEREDISWNFVSFSDNQECLDLIEKRGTVVWAVLDEQCVVRTKAPDTSFAHRLYEVSKNHPRFTATSRDHVDCRFRVRHYAGEVVYDTGGFLEKNKDQLYQEIVDLLRSSRCALVQSLSSDIEVAKSTTRYTSNNSLDFFSSSTGVDATKRRSAVVRPTVASQFKGQLALLLQRVYSTRPHYVRCLEPNDCNIPSAFD 232 ++N+FEQLCIN NE LQQQ N++VF+LEQ+EYERE I W F+SF DNQ+ LDLI+++ T + A+LDEQC+V ++ D F LY +HPRFTATS VD +F V HYAG V Y T +LEKNKDQL +LL++S L+ + + + + R +V +V +QF QL+ L R+ +T PHY+RCL+PND P FD Sbjct: 541 EQNNFEQLCINYTNEALQQQFNRYVFKLEQDEYEREGILWKFISFPDNQDVLDLIDRKHTGIIALLDEQCIV-PRSTDEKFTRYLYAKCDSHPRFTATSAQRVDYKFSVEHYAGPVEYGTESWLEKNKDQLPASSANLLKASEFKLLNDIQPFVR----------------------TEDREGRGSVATKSVGAQFSEQLSQLRSRIDATVPHYIRCLKPNDELKPDTFD 747
BLAST of NO10G02460 vs. NCBI_GenBank
Match: XP_002184750.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC43809.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 188.3 bits (477), Expect = 2.600e-44 Identity = 108/231 (46.75%), Postives = 135/231 (58.44%), Query Frame = 0 Query: 2 QKNSFEQLCINAANEELQQQSNQFVFRLEQEEYEREDISWNFVSFSDNQECLDLIEKRGTVVWAVLDEQCVVRTKAP-DTSFAHRLYEVSKNHPRFTATSRDHVDCRFRVRHYAGEVVYDTGGFLEKNKDQLYQEIVDLLRSSRCALVQSLSSDIEVAKSTTRYTSNNSLDFFSSSTGVDATKRRSAVVRPTVASQFKGQLALLLQRVYSTRPHYVRCLEPNDCNIPSAFD 232 Q NSFEQLCIN NE LQQQ N FV R EQ EYE+E I W F+ F +NQ+ LDLI+KRG + +LD+QC R P DTSF ++Y++ N RF+AT +F V HYAG V Y GF EKN+D+L L SS VQ L+ +E A ++ S S+ F S S V RPTVA QF+ QL L ++ T PHY+RCL+PNDC +P FD Sbjct: 418 QVNSFEQLCINYCNEALQQQFNAFVLRNEQAEYEKEGILWKFIEFPENQDVLDLIDKRGIGILHILDDQC--RAPGPSDTSFGLQVYQMCANSSRFSATRAQKAHLQFAVHHYAGPVTYTAKGFTEKNRDELPTSTRTLFLSSESTFVQQLAHILEWAPNSNASASAFSVRSFQRSD--------STVGRPTVAGQFQRQLKKLRSKIDQTSPHYIRCLKPNDCLLPDKFD 638 The following BLAST results are available for this feature:
BLAST of NO10G02460 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO10G02460 ID=NO10G02460|Name=NO10G02460|organism=Nannochloropsis oceanica|type=gene|length=702bpback to top protein sequence of NO10G02460.1 >NO10G02460.1-protein ID=NO10G02460.1-protein|Name=NO10G02460.1|organism=Nannochloropsis oceanica|type=polypeptide|length=234bpback to top Synonyms
Publications
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