NO10G02390, NO10G02390 (gene) Nannochloropsis oceanica

Overview
NameNO10G02390
Unique NameNO10G02390
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1662
Alignment locationchr10:652567..654228 +

Link to JBrowse

Properties
Property NameValue
DescriptionRna family
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:652567..654228 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0008033tRNA processing
GO:0006396RNA processing
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0030697S-adenosylmethionine-dependent tRNA (m5U54) methyltransferase activity
GO:0008173RNA methyltransferase activity
GO:0016740transferase activity
Vocabulary: INTERPRO
TermDefinition
IPR029063SAM-dependent_MTases
IPR012340NA-bd_OB-fold
IPR025795tRNA_(uracil-5-)_MeTrfase
IPR010280U5_MeTrfase_fam
Homology
BLAST of NO10G02390 vs. NCBI_GenBank
Match: EWM25445.1 (rna family [Nannochloropsis gaditana])

HSP 1 Score: 696.4 bits (1796), Expect = 7.000e-197
Identity = 340/462 (73.59%), Postives = 378/462 (81.82%), Query Frame = 0
Query:   92 KPWQGPFLYHEELELTVDSLTNLGLGICRTSLPLQSSPXXXXXXXXXXXXXXXXXXXXXXXXXAPVAPESWVIMVPGVIPGERIRLRIYRNHKNYSEADLVEVIEASPARVEPVCSLFGRCGGCQYQHMSITAQRDWKQQHVVDVLARTGNITNVAVQKVIGTDDVLGYRSKITPHHEKPRGGEIKDIGFLKLGSRALVDVEQCAIATPAINARLMGLREEVRARARAAAAEETPKKPKGATLFLRETQEGVVTDPRVEVSDKIRGLTFKYTAGSFFQNNPFMLPEMVGYVTGKAREGGMRFLVDAYCGGGLFCLSASKDFEACYGVEISELAILSARRNADLNEITNCHFRAGDASDIFAGIKHIRGQETVMIIDPPRKGCDEDFLTQLCAFRPARIVYVSCDPATQARDAQVLVRSGYEIEELQPFDLFPQTRHIENVIVFADARLSGPGHGPAAPAAAE 554
            KPWQGPF YHEELELTV+SLTNLG GICR SLP  S P                            +PE WV+MVPGVIPGERIRLRIYRNHKNYSEADL+ V+E+SP RVEP C LFG CGGCQYQHMS+ AQR WK++HV+ VLARTGN+T VAVQ+ IGT+  LGYRSKITPHHEKPRGGEI++IGFLKLGSRALVDV +CAIATPAINARL GLREEVR  ARAAA  ETP+KPKGATL LRET+EGVVTDPR EVSD++ GL FKYTAGSFFQNNP++LP MV YV  KA    +R+LVDAYCGGGLFCLSASK+FEACYGVEISELAILSA+RNA+LN+I NCHF+AGDA+DIFAGI HI G +TV I+DPPRKGCDE FLTQLC FRPARIVYVSCDPATQARDA+ L+  GY+IEE+QPFDLFPQTRHIENVIVF +A  +G G GP  P A E
Sbjct:  109 KPWQGPFAYHEELELTVESLTNLGWGICRASLP--SVPDAQSPEMPLPTPSTPGGPRE--------SPEGWVVMVPGVIPGERIRLRIYRNHKNYSEADLMHVLESSPERVEPACPLFGTCGGCQYQHMSVAAQRAWKREHVLQVLARTGNVTGVAVQETIGTEHTLGYRSKITPHHEKPRGGEIREIGFLKLGSRALVDVPECAIATPAINARLRGLREEVRVTARAAAVAETPRKPKGATLLLRETREGVVTDPRAEVSDQVGGLLFKYTAGSFFQNNPYVLPHMVEYVVRKAGAPNVRYLVDAYCGGGLFCLSASKNFEACYGVEISELAILSAQRNAELNKIGNCHFQAGDATDIFAGIGHISGADTVTILDPPRKGCDEGFLTQLCRFRPARIVYVSCDPATQARDARFLLERGYDIEEVQPFDLFPQTRHIENVIVFVEAHRTGAGAGPVPPWAGE 560          
BLAST of NO10G02390 vs. NCBI_GenBank
Match: CBJ27781.1 (RNA methyltransferase, TrmA family [Ectocarpus siliculosus])

HSP 1 Score: 454.5 bits (1168), Expect = 4.600e-124
Identity = 232/459 (50.54%), Postives = 292/459 (63.62%), Query Frame = 0
Query:   97 PFLYHEELELTVDSLTNLGLGICRTSLPLQSSPXXXXXXXXXXXXXXXXXXXXXXXXXAPVAPESWVIMVPGVIPGERIRLRIYRNHKNYSEADLVEVIEASPARVEPVCSLFGRCGGCQYQHMSITAQRDWKQQHVVDVLARTGNITNVAVQKVIGTDDVLGYRSKITPHHEKPRGGEIKDIGFLK--------------LGSRALVDVEQCAIATPAINARLMGLREEVRARARAAAAEETPKK--PKGATLFLRE-TQEGVVTDPRVEVSDKIRGLTFKYTAGSFFQNNPFMLPEMVGYVTGKAREGGMRFLVDAYCGGGLFCLSASKDFEACYGVEISELAILSARRNADLNEITNCHFRAGDASDIFAGIKHIRGQETVMIIDPPRKGCDEDFLTQLCAFRPARIVYVSCDPATQARDAQVLVRSGYEIEELQPFDLFPQTRHIENVIVFADAR 539
            P+ Y EEL + ++SLTNLG GI R                                         WV+MVP VIPGE ++ +++RNH NYSEA LV V E SP RVEP C LFG CGGCQYQHMS++ QRDWK Q V+D L R G + + AV+   GTD+  GYRSK+TPH++ P  G +++IGF K              +    +VDVE+C +AT  IN  L   R+E R R +AA      K+   +GATL  RE T+EG VTD    VS+++ G+ F + AG FFQNNP++LP MV YV  +A+EGG + L+DAYCGGGLFCLSAS  FE C G+EIS +A+  A RNA  N+I+NC F AG AS+IFA +      ETV+I+DPPRKGCD+ FL QL  FRP R+VYVSCDPATQARDA+ ++ +GYE  ++QPFDLFPQTRHIENVI F D R
Sbjct:   92 PYEYLEELTVRIESLTNLGEGIARE------------------------------------GETGWVVMVPHVIPGELVKCKVFRNHANYSEATLVSVEEPSPDRVEPNCPLFGMCGGCQYQHMSVSMQRDWKNQQVMDCLTRIGGMVDPAVKDTFGTDETYGYRSKLTPHYDAPYQGRVREIGFKKVKFPTIYHGVDLGNVNPSKVVDVERCPLATEGINESLPPARQEARERVQAAFDSGDGKRVGKRGATLLFRETTEEGTVTDNNAHVSERVGGMVFNFKAGEFFQNNPYVLPHMVDYVVARAKEGGAKNLIDAYCGGGLFCLSASTSFEKCAGIEISPMAVDCATRNAATNDISNCLFLAGTASNIFANVS-FTPSETVVIVDPPRKGCDQLFLGQLFKFRPTRLVYVSCDPATQARDAKEIMANGYEAVDIQPFDLFPQTRHIENVITFQDNR 513          
BLAST of NO10G02390 vs. NCBI_GenBank
Match: PDH28253.1 (SAM-dependent methyltransferase [Puniceicoccaceae bacterium MED-G30])

HSP 1 Score: 429.1 bits (1102), Expect = 2.100e-116
Identity = 222/446 (49.78%), Postives = 281/446 (63.00%), Query Frame = 0
Query:   97 PFLYHEELELTVDSLTNLGLGICRTSLPLQSSPXXXXXXXXXXXXXXXXXXXXXXXXXAPVAPESWVIMVPGVIPGERIRLRIYRNHKNYSEADLVEVIEASPARVEPVCSLFGRCGGCQYQHMSITAQRDWKQQHVVDVLARTGNITNVAVQKVIGTDDVLGYRSKITPHHEKPRGGEIKDIGFLKLG-SRALVDVEQCAIATPAINARLMGLREEVRARARAAAAEETPKKPKGATLFLRETQEGVVTDPRVEVSDKIRGLTFKYTAGSFFQNNPFMLPEMVGYVTGKAREGGMRFLVDAYCGGGLFCLSASKDFEACYGVEISELAILSARRNADLNEITNCHFRAGDASDIFAGIKHIRGQETVMIIDPPRKGCDEDFLTQLCAFRPARIVYVSCDPATQARDAQVLVRSGYEIEELQPFDLFPQTRHIENVIVFADARLSG 542
            P+ YH ELEL VDSLTNLG GICR                                     A + WV+MVP VIPGER+R RIYRNH NYSEADLVEV++ SP RV+P C LF  CGGCQYQH+    Q + K   VV+++ + G +    V+  +G+  +  YRSKITPH+E+P     + IGFL+ G  R +VDVE C IAT AIN  L G      ARA A  +    ++ +G TL LR   EGVVTDP+  VS+++ GLTF++ AG FFQNNP++LP+MV YV G+A+ GG+++LVDAYCG GLF LSA+  F    GVE+S+ A+L A+ N  ++ I N  F  G A  IF G+  +  +ET +IIDPPRKGCD  F  QL  +RPAR+VYVSCDPATQ RD +  ++SGY IE +QPFDLFP TRHIENVI       +G
Sbjct:   13 PYPYHYELELIVDSLTNLGSGICR-------------------------------------ATDGWVVMVPFVIPGERVRARIYRNHSNYSEADLVEVLDRSPDRVDPACRLFQTCGGCQYQHIEYGRQLEEKTARVVELMEKAG-LGEHRVEPAVGSPQLYHYRSKITPHYERPARDGSQPIGFLQHGRRRTIVDVESCPIATQAINEVLPG------ARAEARESGGKKRRQRGGTLLLRHVLEGVVTDPKAVVSERVGGLTFQFRAGEFFQNNPYILPQMVDYVIGEAKFGGVQYLVDAYCGSGLFALSAASSFTQVAGVEVSDQAVLWAQANCRISRIENARFLIGKAEAIFKGLSFL-PEETTVIIDPPRKGCDASFRDQLMGYRPARVVYVSCDPATQTRDVEEFLQSGYRIERIQPFDLFPHTRHIENVITLVGPEENG 413          
BLAST of NO10G02390 vs. NCBI_GenBank
Match: OUU71942.1 (SAM-dependent methyltransferase [Coraliomargarita sp. TMED73])

HSP 1 Score: 427.2 bits (1097), Expect = 7.900e-116
Identity = 221/446 (49.55%), Postives = 281/446 (63.00%), Query Frame = 0
Query:   97 PFLYHEELELTVDSLTNLGLGICRTSLPLQSSPXXXXXXXXXXXXXXXXXXXXXXXXXAPVAPESWVIMVPGVIPGERIRLRIYRNHKNYSEADLVEVIEASPARVEPVCSLFGRCGGCQYQHMSITAQRDWKQQHVVDVLARTGNITNVAVQKVIGTDDVLGYRSKITPHHEKPRGGEIKDIGFLKLG-SRALVDVEQCAIATPAINARLMGLREEVRARARAAAAEETPKKPKGATLFLRETQEGVVTDPRVEVSDKIRGLTFKYTAGSFFQNNPFMLPEMVGYVTGKAREGGMRFLVDAYCGGGLFCLSASKDFEACYGVEISELAILSARRNADLNEITNCHFRAGDASDIFAGIKHIRGQETVMIIDPPRKGCDEDFLTQLCAFRPARIVYVSCDPATQARDAQVLVRSGYEIEELQPFDLFPQTRHIENVIVFADARLSG 542
            P+ YH ELEL VDSLTNLG GICR                                     A + WV+MVP VIPGER+R RIYRNH NYSEADLVEV++ SP RV+P C LF  CGGCQYQH+    Q + K   VV+++ + G +    V+  +G+  +  YRSKITPH+E+P     + IGFL+ G  R +VDVE C IAT AIN  L G      ARA A  +    ++ +G TL LR   EGVVTDP+  VS+++ GLTF++ AG FFQNNP++LP+MV YV G+A+ GG+++LVDAYCG GLF LSA+  F    GVE+S+ A+L A+ N  ++ I N  F  G A  IF G+  +  +ET +IIDPPRKGCD  F  QL  +RPAR+VYVSC+PATQ RD +  ++SGY IE +QPFDLFP TRHIENVI       +G
Sbjct:   13 PYPYHYELELIVDSLTNLGSGICR-------------------------------------ATDGWVVMVPFVIPGERVRARIYRNHSNYSEADLVEVLDRSPDRVDPACRLFQTCGGCQYQHIEYGRQLEEKTARVVELMEKAG-LGEHRVEPAVGSPQLYHYRSKITPHYERPARDGSQPIGFLQHGRRRTIVDVESCPIATQAINEVLPG------ARAEARESGGKKRRQRGGTLLLRHVLEGVVTDPKAVVSERVGGLTFQFRAGEFFQNNPYILPQMVDYVIGEAKFGGVQYLVDAYCGSGLFALSAASSFTQVAGVEVSDQAVLWAQANCRISRIENARFLIGKAEAIFKGLSFL-PEETTVIIDPPRKGCDASFRDQLMGYRPARVVYVSCNPATQTRDVEEFLQSGYRIERIQPFDLFPHTRHIENVITLVGPEENG 413          
BLAST of NO10G02390 vs. NCBI_GenBank
Match: WP_078811420.1 (class I SAM-dependent RNA methyltransferase [Prosthecobacter debontii] >SKA76482.1 23S rRNA (uracil1939-C5)-methyltransferase [Prosthecobacter debontii])

HSP 1 Score: 417.9 bits (1073), Expect = 4.800e-113
Identity = 208/440 (47.27%), Postives = 275/440 (62.50%), Query Frame = 0
Query:   97 PFLYHEELELTVDSLTNLGLGICRTSLPLQSSPXXXXXXXXXXXXXXXXXXXXXXXXXAPVAPESWVIMVPGVIPGERIRLRIYRNHKNYSEADLVEVIEASPARVEPVCSLFGRCGGCQYQHMSITAQRDWKQQHVVDVLARTGNITNVAVQKVIGTDDVLGYRSKITPHHEKPRGGEIKDIGFLKLGSR-ALVDVEQCAIATPAINARLMGLREEVRARARAAAAEETPKKPKGATLFLRETQEGVVTDPRVEVSDKIRGLTFKYTAGSFFQNNPFMLPEMVGYVTGKAREGGMRFLVDAYCGGGLFCLSASKDFEACYGVEISELAILSARRNADLNEITNCHFRAGDASDIFAGIKHIRGQETVMIIDPPRKGCDEDFLTQLCAFRPARIVYVSCDPATQARDAQVLVRSGYEIEELQPFDLFPQTRHIENVIVFA 536
            PF YH+EL++ +++LTN G G+ R                                       + WV+ VP  +PGE++R R+YRNHKNYS ADLVEV+E S  RV+P C+LFG CGGCQYQH+    Q +WK++ V ++L     I +  V+ VI +    GYRSKITPH  KP+GGEI  IGFL+ G+R A+VDVE C IA PA+N  L  +R + RA   A           GATL +R    GV+T       +++  + F++ AG FFQNNPF+LPE VGY   +AR  G RFLVDAYCG GLF +SA++DFE   GVE+SE A+  A  NA++N +TNC F A DA +IF  + H  GQETV+IIDPPR GC E+FL QL AF P R+VY+SC+PATQ RD  +   +GY++ ++QPFDLFPQT+H+E V+  +
Sbjct:   11 PFTYHQELDVRIENLTNEGSGVARV--------------------------------------DGWVVFVPFALPGEKVRCRVYRNHKNYSNADLVEVLEPSADRVQPQCTLFGTCGGCQYQHLDYARQTEWKRRQVEELLKHMAKIEH-PVEPVIASPQQYGYRSKITPHFHKPKGGEIGAIGFLRAGTRSAMVDVEHCPIAMPALNEELAAVRAQARANQDAF--------KNGATLLMRAAVNGVLTKADQIAIEQVGDVKFEFQAGDFFQNNPFILPEFVGYAVAEARASGARFLVDAYCGSGLFGISAARDFEEVLGVELSESAVRKAAHNAEINGLTNCKFLAADAREIFKEVPH-AGQETVVIIDPPRAGCSEEFLQQLFAFDPKRVVYISCNPATQMRDLNLFTEAGYKLGKVQPFDLFPQTKHLECVMTLS 402          
BLAST of NO10G02390 vs. NCBI_GenBank
Match: WP_013044220.1 (class I SAM-dependent RNA methyltransferase [Coraliomargarita akajimensis] >ADE55498.1 RNA methyltransferase, TrmA family [Coraliomargarita akajimensis DSM 45221])

HSP 1 Score: 416.8 bits (1070), Expect = 1.100e-112
Identity = 215/437 (49.20%), Postives = 276/437 (63.16%), Query Frame = 0
Query:   97 PFLYHEELELTVDSLTNLGLGICRTSLPLQSSPXXXXXXXXXXXXXXXXXXXXXXXXXAPVAPESWVIMVPGVIPGERIRLRIYRNHKNYSEADLVEVIEASPARVEPVCSLFGRCGGCQYQHMSITAQRDWKQQHVVDVLARTGNITNVAVQKVIGTDDVLGYRSKITPHHEKPRGGEIKDIGFLKLGSR-ALVDVEQCAIATPAINARLMGLREEVRARARAAAAEETPKKPKGATLFLRETQEGVVTDPRVEVSDKIRGLTFKYTAGSFFQNNPFMLPEMVGYVTGKAREGGMRFLVDAYCGGGLFCLSASKDFEACYGVEISELAILSARRNADLNEITNCHFRAGDASDIFAGIKHIRGQETVMIIDPPRKGCDEDFLTQLCAFRPARIVYVSCDPATQARDAQVLVRSGYEIEELQPFDLFPQTRHIENVI 533
            PF YH+ELELTVDSLTNLG+G+CR                                         WV+MVP VIPGER+R+R+YRN+ NYS+ADL+EV+E S  RV P C L+  CGGCQYQH+    Q   K  HV +++ + G + +  ++  IG+ +V  YRSKITPH+++      + IGFL+ G R  +VDVEQC IAT  IN  L   REE    AR +  ++  ++ +G TL LR   EGVVTDP+  VS+++R +TF++ AG FFQNNPF+LP+MV YV  +A   G R+LVDAYCG GLF LS +K FE   GVE+S+ A+L A+ N  ++ I+N  F  G A  IF G+K     ET +IIDPPRKGCDE F  QL  FRP R+VYVSCDPATQARD +  V  GY +  +QPFDLFP TRHIENV+
Sbjct:   13 PFEYHQELELTVDSLTNLGMGVCRDG-------------------------------------NGWVVMVPFVIPGERVRVRVYRNYSNYSDADLLEVLEPSADRVTPQCPLYQTCGGCQYQHVDYERQLAEKTGHVKELMEKIGELDH-PIEGAIGSPEVYYYRSKITPHYQRQNKDGSQPIGFLQFGRRNQIVDVEQCPIATREINEALPEAREE----ARLSGGKK--RRQRGGTLLLRHVLEGVVTDPKAVVSERVRDVTFQFKAGEFFQNNPFILPKMVDYVEAEASADGARYLVDAYCGSGLFALSTAKSFEQVAGVEVSDQAVLWAQANCRISGISNARFLIGKAEAIFNGLK-FPADETALIIDPPRKGCDESFRLQLLQFRPQRLVYVSCDPATQARDVKAFVDGGYRVTRIQPFDLFPHTRHIENVV 404          
BLAST of NO10G02390 vs. NCBI_GenBank
Match: OUU09256.1 (SAM-dependent methyltransferase [Verrucomicrobia bacterium TMED40])

HSP 1 Score: 409.1 bits (1050), Expect = 2.200e-110
Identity = 218/440 (49.55%), Postives = 271/440 (61.59%), Query Frame = 0
Query:   97 PFLYHEELELTVDSLTNLGLGICRTSLPLQSSPXXXXXXXXXXXXXXXXXXXXXXXXXAPVAPESWVIMVPGVIPGERIRLRIYRNHKNYSEADLVEVIEASPARVEPVCSLFGRCGGCQYQHMSITAQRDWKQQHVVDVLARTGNITNVAVQKVIGTDDVLGYRSKITPHHEKPRGGEIKDIGFLKLGS-RALVDVEQCAIATPAINARLMGLREEVRARARAAAAEETPKKPKGATLFLRETQEGVVTDPRVEVSDKIRGLTFKYTAGSFFQNNPFMLPEMVGYVTGKAREGGMRFLVDAYCGGGLFCLSASKDFEACYGVEISELAILSARRNADLNEITNCHFRAGDASDIFAGIKHIRGQET---VMIIDPPRKGCDEDFLTQLCAFRPARIVYVSCDPATQARDAQVLVRSGYEIEELQPFDLFPQTRHIENVI 533
            P+ YH ELE+ ++S++NLG+GI R                                       + WVI +P V+PGE IR RIYRNHKNYS+AD +EV+E SP RV+P C LFG CGGCQYQ +  + Q  WKQ+HV +   R G I    V   + +     YRSK+TPH+EK    E + IGFL+ GS R LVDV  C IAT  INA L   RE +R         +T  K KG TL LR+T EGV+T+P+  VS+++  LTF++ AG FFQNNPF+LP++V YV  +A       LVDAYCGGGLF LSA+  F+   G+EIS      AR NA LN+I N  F  GDA  IF+ +    GQE     +IIDPPRKGCD DF+ Q  AFRP RIVYVSCDPATQARDA++L+  GY I ++QPFDLFPQTRHIENV+
Sbjct:   11 PYPYHHELEILIESVSNLGIGIAR--------------------------------------DKGWVIQIPFVLPGETIRARIYRNHKNYSDADCLEVLEPSPHRVQPSCDLFGVCGGCQYQAVDYSTQLSWKQKHVEETFLRIGGI-ETTVNPTMASPKRFAYRSKLTPHYEKTLDTENRKIGFLRHGSRRILVDVPTCPIATDPINAALPEEREILRT--------QTMGKKKGGTLLLRDTIEGVITNPKETVSERVGDLTFQFKAGEFFQNNPFLLPQLVQYVIAEANSEVCPVLVDAYCGGGLFGLSAASQFDRVIGIEISREGFEGARTNALLNKIDNAEFFLGDAVSIFSEL----GQENEPCALIIDPPRKGCDPDFIDQTLAFRPQRIVYVSCDPATQARDAKLLLNGGYRISQIQPFDLFPQTRHIENVL 399          
BLAST of NO10G02390 vs. NCBI_GenBank
Match: OHE71497.1 (SAM-dependent methyltransferase [Verrucomicrobia bacterium GWC2_42_7])

HSP 1 Score: 406.4 bits (1043), Expect = 1.400e-109
Identity = 215/440 (48.86%), Postives = 275/440 (62.50%), Query Frame = 0
Query:   96 GPFLYHEELELTVDSLTNLGLGICRTSLPLQSSPXXXXXXXXXXXXXXXXXXXXXXXXXAPVAPESWVIMVPGVIPGERIRLRIYRNHKNYSEADLVEVIEASPARVEPVCSLFGRCGGCQYQHMSITAQRDWKQQHVVDVLARTGNITNVAVQKVIGTDDVLGYRSKITPHHEKPRGGEIKDIGFLKLGSR-ALVDVEQCAIATPAINARLMGLREEVRARARAAAAEETPKKPKGATLFLRETQEGVVTDPRVEVSDKIRGLTFKYTAGSFFQNNPFMLPEMVGYVTGKAREGGMRFLVDAYCGGGLFCLSASKDFEACYGVEISELAILSARRNADLNEITNCHFRAGDASDIFAGIKHIRGQETVMIIDPPRKGCDEDFLTQLCAFRPARIVYVSCDPATQARDAQVLVRS-GYEIEELQPFDLFPQTRHIENVIV 534
            GPF YH+E+ELTVD+LTNLG+G+ R                                       + WV+MVP  +PGER+R RI+RNHKNYSEADL+EV E SP RV+P C LFG CGGCQYQH+S   Q  WKQQ V ++ A    I   AV   + ++    YRSKITPH  KP   E+ DIGFLK G R ALVDVEQC IAT  IN+ L   R+ +++  +        K  +G TL LR+T +G++T+P+    +KI    F +TAG FFQNNPF+LP+M+ YV  +A  GG  +LVDAYCG G+F ++A   F+   G+E++   I  A +NA  N  TNC F  G+A +IF  I  + G +T +IIDPPRKGCDE F+ QL AF PARIVYVSC P TQARD + +++S  Y++ E+QP DLFPQTRHIENV V
Sbjct:   13 GPFEYHQEIELTVDTLTNLGVGLGRV--------------------------------------DGWVVMVPFSLPGERVRARIFRNHKNYSEADLIEVTEPSPHRVQPKCDLFGNCGGCQYQHLSYEQQLKWKQQQVKEIFAHLAGI-ETAVNPPLSSEQTFHYRSKITPHFNKPT-NEV-DIGFLKQGQRHALVDVEQCVIATERINSVLPCERQALKSNPQ--------KFKRGGTLLLRDTMDGIMTNPKAPCREKIGEWVFHFTAGEFFQNNPFVLPKMIDYVVKQASAGGAEYLVDAYCGVGVFAIAAHSLFKEVVGIEVNSEGIKWAHKNALSNHATNCSFIEGNAENIFTNIA-VPGNKTAIIIDPPRKGCDEAFIQQLLAFAPARIVYVSCAPDTQARDLKTILQSHPYKLVEVQPIDLFPQTRHIENVCV 402          
BLAST of NO10G02390 vs. NCBI_GenBank
Match: OUU59632.1 (SAM-dependent methyltransferase [Verrucomicrobia bacterium TMED60])

HSP 1 Score: 404.8 bits (1039), Expect = 4.200e-109
Identity = 211/437 (48.28%), Postives = 270/437 (61.78%), Query Frame = 0
Query:   97 PFLYHEELELTVDSLTNLGLGICRTSLPLQSSPXXXXXXXXXXXXXXXXXXXXXXXXXAPVAPESWVIMVPGVIPGERIRLRIYRNHKNYSEADLVEVIEASPARVEPVCSLFGRCGGCQYQHMSITAQRDWKQQHVVDVLARTGNITNVAVQKVIGTDDVLGYRSKITPHHEKPRGGEIKDIGFLKLGS-RALVDVEQCAIATPAINARLMGLREEVRARARAAAAEETPKKPKGATLFLRETQEGVVTDPRVEVSDKIRGLTFKYTAGSFFQNNPFMLPEMVGYVTGKAREGGMRFLVDAYCGGGLFCLSASKDFEACYGVEISELAILSARRNADLNEITNCHFRAGDASDIFAGIKHIRGQETVMIIDPPRKGCDEDFLTQLCAFRPARIVYVSCDPATQARDAQVLVRSGYEIEELQPFDLFPQTRHIENVI 533
            P+ YH E++L +++LTNLG GI R                                       + WVI VP V+PGE IR RIYRNHKNYS+AD +E++++SP RV+  C LFG CGGCQYQ +    Q +WK+  V +   + G +T +       +    GYRSK+TPH+EK R G  + +GFLK GS R LVDV  C IAT +IN        E   +AR A  +ET  K KG TL LR+ QEGV TDP+  VS+++ G+ F++ AG FFQNNPF+LP++V +V  +A  G    L+DAYCGGGLF LSAS+ F+   G+EIS      AR NA LN+I N  F  GDAS IF  ++++  +   +I+DPPRKGCD DFL Q   FRP RIVYVSCDPATQARDA++L   GY I + QPFDLFPQTRHIENV+
Sbjct:   13 PYPYHHEVDLKIETLTNLGFGIAR--------------------------------------DDGWVIQVPFVLPGELIRARIYRNHKNYSDADSIEILQSSPDRVDAKCKLFGTCGGCQYQSVDYQKQLEWKRNQVNECFEKIGGLT-ITTMPTFPSPKTYGYRSKLTPHYEKSREGMERKLGFLKHGSRRILVDVPSCPIATTSIN--------EFLPQARTALFKET--KKKGGTLLLRDVQEGVATDPKEVVSERVNGIVFQFKAGEFFQNNPFILPDLVDHVIEQANPGNSISLIDAYCGGGLFSLSASRRFQKVVGIEISREGFEGARTNALLNQIKNAEFFLGDASSIFQELQNL-PRPCSLIVDPPRKGCDADFLRQCIEFRPNRIVYVSCDPATQARDAKILTXGGYRILQAQPFDLFPQTRHIENVL 399          
BLAST of NO10G02390 vs. NCBI_GenBank
Match: KXU36065.1 (SAM-dependent methyltransferase [Cephaloticoccus capnophilus])

HSP 1 Score: 399.8 bits (1026), Expect = 1.400e-107
Identity = 244/452 (53.98%), Postives = 305/452 (67.48%), Query Frame = 0
Query:   97 PFLYHEELELTVDSLTNLGLGICRTSLPLQSSPXXXXXXXXXXXXXXXXXXXXXXXXXAPVAPES------WVIMVPGVIPGERIRLRIYRNHKNYSEADLVEVIEASPARVEPVCSLFGRCGGCQYQHMSITAQRDWKQQHVVDVLARTGNITNVAVQKVIGTDDVLGYRSKITPHHEKPRGGEIKDIGFLKLGSR-ALVDVEQCAIATPAINARLMGLREEVRARARAAAAEETPKKPKGATLFLRETQEGVVTDPRVEVSDKI-RG-----LTFKYTAGSFFQNNPFMLPEMVGYVTGKAREGGMRFLVDAYCGGGLFCLSASKDFEACYGVEISELAILSARRNADLNEITNCHFRAGDASDIFAGIKHIRGQETVMIIDPPRKGCDEDFLTQLCAFRPARIVYVSCDPATQARDAQVLVRSGYEIEELQPFDLFPQTRHIENVIVFA 536
            PF YH E+EL + +LTN G G+ R  LP + + XXXXXXXXXXXXXXXXXXXXXXXXX   +  S      WV+MVP  +PGER+R+R++RNHKNYSEADL++V+ ASP RVEP C+LFG+CGGCQYQH+    Q  WK++ V ++L     I +  V  VIG+    GYRSKITPH +  R      IGFL+ G+R  ++DV +CAIATP INARL+ +RE  R R       E  +  + ATL LR   EGVVTD    +++++ RG     L  ++ A  FFQNNPF+LP   GYV  +A   G RFLVDAYCG GLF LSA+  FE   GVEISE +I  A+ NA  N ITN  F AGDA+ IFAG+     +ET +IIDPPR+GCDE FL QL AF P  +VYVSCDPATQ RD ++ + +GY ++ +QPFDLFPQTRH+E VI  A
Sbjct:   13 PFAYHAEIELEISTLTNRGHGLGRVELPEEGAAXXXXXXXXXXXXXXXXXXXXXXXXXPTRSTPSKNSLRQWVVMVPFCLPGERVRVRVFRNHKNYSEADLLKVLRASPHRVEPYCALFGQCGGCQYQHLDYAEQLVWKRRQVEELLQHMVGIEH-EVAPVIGSPRQYGYRSKITPHFKVGRPA----IGFLRQGTRFEVIDVPECAIATPEINARLVEVRERTRQRL------ERREYKRDATLLLRHASEGVVTDYDAVITEELARGDAQEPLKLRFLARDFFQNNPFILPAFTGYVREQAASSGGRFLVDAYCGSGLFALSAASAFEQAAGVEISESSIRFAQENAVANGITNARFLAGDAAAIFAGL-DFPPEETAVIIDPPRRGCDEGFLGQLFAFGPRAVVYVSCDPATQMRDLRLFLEAGYALKAVQPFDLFPQTRHLECVITLA 452          
The following BLAST results are available for this feature:
BLAST of NO10G02390 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM25445.17.000e-19773.59rna family [Nannochloropsis gaditana][more]
CBJ27781.14.600e-12450.54RNA methyltransferase, TrmA family [Ectocarpus sil... [more]
PDH28253.12.100e-11649.78SAM-dependent methyltransferase [Puniceicoccaceae ... [more]
OUU71942.17.900e-11649.55SAM-dependent methyltransferase [Coraliomargarita ... [more]
WP_078811420.14.800e-11347.27class I SAM-dependent RNA methyltransferase [Prost... [more]
WP_013044220.11.100e-11249.20class I SAM-dependent RNA methyltransferase [Coral... [more]
OUU09256.12.200e-11049.55SAM-dependent methyltransferase [Verrucomicrobia b... [more]
OHE71497.11.400e-10948.86SAM-dependent methyltransferase [Verrucomicrobia b... [more]
OUU59632.14.200e-10948.28SAM-dependent methyltransferase [Verrucomicrobia b... [more]
KXU36065.11.400e-10753.98SAM-dependent methyltransferase [Cephaloticoccus c... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL052nonsL052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR004ncniR004Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR015ngnoR015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001107NSK001107Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO10G02390.1NO10G02390.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|586003gene_3974Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100005g14gene5047Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO10G02390.1NO10G02390.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO10G02390 ID=NO10G02390|Name=NO10G02390|organism=Nannochloropsis oceanica|type=gene|length=1662bp
ATGCTGCTCTCCATTTTACGCGGAATCGCGGCGCGTCGCAACCCAGTCAG
TCGAGCAGCCTTTGTCTTCTTGCACCCTAGTCCCTCCCAATCGATTACGA
TTACCTCCACCGTTAGTGCTGCCTCCTACACTCGTCCCTCCTTGCCCATG
CGACGCACCAACGGGGGTCGCATCAAATCGACCGTCGTACCTTTGACGCA
AAGGGACGAAGAGGACGCGGATAACGCCGCTCCCGCCCAGCCGAAGCAAA
AGAAGCAACAGGCCCGCAAGCAAAAACCATGGCAAGGTCCTTTCCTATAC
CATGAGGAGCTCGAGCTCACTGTCGATAGTCTTACCAATCTGGGCCTCGG
CATTTGCCGCACATCCTTGCCATTACAATCATCCCCAACGTTCACAAGTG
ACTCGAATTCCTCTTCGTCACCTATACCACCACCACCGCCTGTAGAAAGA
GAGAGATCAGCAGCACCAGTGGCGCCGGAAAGCTGGGTGATAATGGTCCC
CGGTGTCATTCCCGGCGAGCGGATCCGCCTCCGCATCTACCGCAACCACA
AAAACTACTCAGAAGCTGATCTAGTCGAAGTCATAGAAGCTTCTCCAGCC
CGTGTTGAGCCCGTTTGTTCTTTGTTTGGGAGGTGTGGGGGTTGTCAATA
CCAACATATGAGTATAACTGCCCAGAGAGATTGGAAACAACAGCATGTCG
TTGACGTGCTTGCCCGGACAGGAAACATCACGAATGTGGCCGTGCAGAAA
GTAATTGGGACAGATGACGTGTTGGGGTACCGCAGTAAGATTACCCCCCA
CCACGAAAAACCTCGTGGGGGAGAAATCAAAGATATTGGCTTCCTTAAGC
TCGGTTCTCGAGCCTTAGTCGACGTCGAGCAATGCGCCATCGCCACTCCA
GCAATCAATGCCCGATTGATGGGACTTCGAGAAGAGGTCCGTGCACGAGC
CCGCGCTGCGGCAGCGGAGGAGACTCCCAAGAAACCGAAGGGGGCAACAT
TGTTCTTGAGAGAAACGCAGGAGGGGGTGGTGACTGACCCGAGGGTAGAA
GTGTCGGATAAAATCAGGGGGTTGACGTTTAAATACACGGCGGGCAGTTT
CTTTCAAAATAATCCGTTTATGTTGCCGGAGATGGTTGGATACGTGACAG
GAAAGGCGAGGGAAGGAGGAATGAGGTTTTTGGTGGACGCTTACTGTGGG
GGGGGGTTGTTTTGTCTCTCAGCAAGTAAGGATTTCGAGGCGTGTTATGG
GGTGGAGATAAGTGAGTTGGCTATACTAAGTGCAAGGAGGAACGCCGACT
TAAACGAGATTACGAATTGTCACTTTCGCGCGGGGGATGCGAGTGATATA
TTCGCGGGGATAAAGCATATACGAGGTCAGGAAACGGTAATGATCATAGA
CCCCCCCCGCAAAGGGTGTGATGAAGACTTTTTGACGCAGCTTTGTGCGT
TTCGACCGGCAAGGATTGTGTACGTAAGTTGTGACCCAGCCACGCAAGCG
AGAGACGCGCAGGTGCTTGTAAGGAGTGGATATGAAATCGAGGAGCTCCA
GCCTTTTGATTTGTTCCCTCAGACGAGGCATATTGAGAATGTGATTGTAT
TCGCTGACGCTCGGTTAAGTGGGCCGGGACACGGCCCTGCAGCGCCAGCA
GCGGCAGAATGA
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protein sequence of NO10G02390.1

>NO10G02390.1-protein ID=NO10G02390.1-protein|Name=NO10G02390.1|organism=Nannochloropsis oceanica|type=polypeptide|length=554bp
MLLSILRGIAARRNPVSRAAFVFLHPSPSQSITITSTVSAASYTRPSLPM
RRTNGGRIKSTVVPLTQRDEEDADNAAPAQPKQKKQQARKQKPWQGPFLY
HEELELTVDSLTNLGLGICRTSLPLQSSPTFTSDSNSSSSPIPPPPPVER
ERSAAPVAPESWVIMVPGVIPGERIRLRIYRNHKNYSEADLVEVIEASPA
RVEPVCSLFGRCGGCQYQHMSITAQRDWKQQHVVDVLARTGNITNVAVQK
VIGTDDVLGYRSKITPHHEKPRGGEIKDIGFLKLGSRALVDVEQCAIATP
AINARLMGLREEVRARARAAAAEETPKKPKGATLFLRETQEGVVTDPRVE
VSDKIRGLTFKYTAGSFFQNNPFMLPEMVGYVTGKAREGGMRFLVDAYCG
GGLFCLSASKDFEACYGVEISELAILSARRNADLNEITNCHFRAGDASDI
FAGIKHIRGQETVMIIDPPRKGCDEDFLTQLCAFRPARIVYVSCDPATQA
RDAQVLVRSGYEIEELQPFDLFPQTRHIENVIVFADARLSGPGHGPAAPA
AAE*
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Synonyms
Publications