NO10G02370, NO10G02370 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO10G02370 vs. NCBI_GenBank
Match: EWM25413.1 (cyclophilin [Nannochloropsis gaditana]) HSP 1 Score: 347.4 bits (890), Expect = 2.800e-92 Identity = 167/194 (86.08%), Postives = 178/194 (91.75%), Query Frame = 0 Query: 3 SKTFSFLAGMAALAVSAADDATKVTHKVFFDINVGDKPAGRIVFGLYGNTVPKTVENFRALCTGEKGMGKQGHELTYKGSKFHRVIPSFMLQGGDFTHGNGMGGESIYGAKFADENFTLKHSRPGLLSMANAGRDTNGSQFFITTVVTSWLDGRHVVFGEVLEGMDVVKMIEGLGSNDGTVKTPVVIADSGELK 197 +K+ +F+ GMA A+S ADD TKVTHKVFFDINV DKPAGRIVFGLYGNTVP+TVENFRALCTGEKG+G G L YKGSKFHRVIPSFMLQGGDFTH NGMGGESIYG +FADENF LKH+RPGLLSMANAGRDTNGSQFFITTVVTSWLDGRHVVFGEVLEGMDVVKMIEGLGS+DGTVK PV+IADSGELK Sbjct: 4 AKSLAFMLGMATFALSQADDLTKVTHKVFFDINVADKPAGRIVFGLYGNTVPRTVENFRALCTGEKGIGGAGRPLHYKGSKFHRVIPSFMLQGGDFTHNNGMGGESIYGGRFADENFKLKHTRPGLLSMANAGRDTNGSQFFITTVVTSWLDGRHVVFGEVLEGMDVVKMIEGLGSDDGTVKKPVIIADSGELK 197
BLAST of NO10G02370 vs. NCBI_GenBank
Match: XP_013631731.1 (PREDICTED: peptidyl-prolyl cis-trans isomerase CYP19-4 [Brassica oleracea var. oleracea] >XP_013672904.1 peptidyl-prolyl cis-trans isomerase CYP19-4 [Brassica napus] >CDY55458.1 BnaC04g54560D [Brassica napus]) HSP 1 Score: 285.4 bits (729), Expect = 1.300e-73 Identity = 138/191 (72.25%), Postives = 156/191 (81.68%), Query Frame = 0 Query: 6 FSFLAGMAALA-VSAADDATKVTHKVFFDINVGDKPAGRIVFGLYGNTVPKTVENFRALCTGEKGMGKQGHELTYKGSKFHRVIPSFMLQGGDFTHGNGMGGESIYGAKFADENFTLKHSRPGLLSMANAGRDTNGSQFFITTVVTSWLDGRHVVFGEVLEGMDVVKMIEGLGSNDGTVKTPVVIADSGEL 196 F L AALA + A +D ++THKV+FD+ + K AGR+V GL+G TVPKT ENFRALCTGEKG+GK G L YKGSKFHR+IPSFM+QGGDFTHGNGMGGESIYG KFADENF LKH+ PGLLSMAN+G DTNGSQFFITTV TSWLDGRHVVFG+V++GMDVV IE G GT K+ VVIADSGEL Sbjct: 9 FLTLLLFAALALIQAKEDLKEITHKVYFDVEIDGKEAGRVVIGLFGKTVPKTAENFRALCTGEKGVGKSGKPLHYKGSKFHRIIPSFMIQGGDFTHGNGMGGESIYGQKFADENFKLKHTGPGLLSMANSGEDTNGSQFFITTVTTSWLDGRHVVFGKVVQGMDVVYKIEAEGKQSGTPKSKVVIADSGEL 199
BLAST of NO10G02370 vs. NCBI_GenBank
Match: XP_004500254.1 (PREDICTED: peptidyl-prolyl cis-trans isomerase CYP20-1 [Cicer arietinum]) HSP 1 Score: 285.0 bits (728), Expect = 1.700e-73 Identity = 140/190 (73.68%), Postives = 153/190 (80.53%), Query Frame = 0 Query: 8 FLAGMAAL--AVSAADDATKVTHKVFFDINVGDKPAGRIVFGLYGNTVPKTVENFRALCTGEKGMGKQGHELTYKGSKFHRVIPSFMLQGGDFTHGNGMGGESIYGAKFADENFTLKHSRPGLLSMANAGRDTNGSQFFITTVVTSWLDGRHVVFGEVLEGMDVVKMIEGLGSNDGTVKTPVVIADSGEL 196 FL G AL A + +D +VTHKV+FD+ + K AGR+V GLYG TVPKT ENFRALCTGEKG GK G L YKGS FHR+IPSFM+QGGDFTHGNGMGGESIYG KFADENF LKH+ PGLLSMANAG DTNGSQFFITTV TSWLDGRHVVFG+VL GMDVV IE G+ GT K+ VVIADSGEL Sbjct: 13 FLFGTLALIQAKKSKEDLKEVTHKVYFDVEIDGKAAGRVVIGLYGKTVPKTAENFRALCTGEKGTGKNGKPLHYKGSSFHRIIPSFMIQGGDFTHGNGMGGESIYGEKFADENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKIEAEGNQSGTPKSKVVIADSGEL 202
BLAST of NO10G02370 vs. NCBI_GenBank
Match: ESQ51499.1 (hypothetical protein EUTSA_v10016970mg [Eutrema salsugineum]) HSP 1 Score: 285.0 bits (728), Expect = 1.700e-73 Identity = 140/199 (70.35%), Postives = 160/199 (80.40%), Query Frame = 0 Query: 2 LSKTFSFLAG----MAALA-VSAADDATKVTHKVFFDINVGDKPAGRIVFGLYGNTVPKTVENFRALCTGEKGMGKQGHELTYKGSKFHRVIPSFMLQGGDFTHGNGMGGESIYGAKFADENFTLKHSRPGLLSMANAGRDTNGSQFFITTVVTSWLDGRHVVFGEVLEGMDVVKMIEGLGSNDGTVKTPVVIADSGEL 196 ++K S L G AALA + A +D ++THKV+FD+ + K AGR+V GL+G TVPKT ENFRALCTGEKG+GK G L YKGSKFHR+IPSFM+QGGDFTHGNGMGGESIYG KFADENF LKH+ PGLLSMAN+G DTNGSQFFITTV TSWLDGRHVVFG+V++GMDVV IE G GT K+ VVIADSGEL Sbjct: 113 MAKASSILLGTLLLFAALAFIQAKEDLKEITHKVYFDVEIEGKDAGRVVIGLFGKTVPKTAENFRALCTGEKGVGKSGKPLHYKGSKFHRIIPSFMIQGGDFTHGNGMGGESIYGQKFADENFKLKHTGPGLLSMANSGEDTNGSQFFITTVKTSWLDGRHVVFGKVVQGMDVVYKIEAEGKQSGTPKSKVVIADSGEL 311
BLAST of NO10G02370 vs. NCBI_GenBank
Match: XP_019578929.1 (PREDICTED: peptidyl-prolyl cis-trans isomerase CYP19-4 [Rhinolophus sinicus]) HSP 1 Score: 285.0 bits (728), Expect = 1.700e-73 Identity = 137/191 (71.73%), Postives = 156/191 (81.68%), Query Frame = 0 Query: 6 FSFLAGMAALA-VSAADDATKVTHKVFFDINVGDKPAGRIVFGLYGNTVPKTVENFRALCTGEKGMGKQGHELTYKGSKFHRVIPSFMLQGGDFTHGNGMGGESIYGAKFADENFTLKHSRPGLLSMANAGRDTNGSQFFITTVVTSWLDGRHVVFGEVLEGMDVVKMIEGLGSNDGTVKTPVVIADSGEL 196 F+ L AALA + A +D ++THKV+FD+ + K AGR+V GL+G TVPKT ENFRALCTGEKG+GK G L YKGSKFHR+IPSFM+QGGDFTHGNGMGGESIYG KFADENF LKH+ PG LSMAN+G DTNGSQFFITTV TSWLDGRHVVFG+V++GMDVV IE G GT K+ VVIADSGEL Sbjct: 9 FATLLLFAALALIQAKEDPKEITHKVYFDVEIDGKEAGRVVIGLFGKTVPKTAENFRALCTGEKGVGKSGKPLHYKGSKFHRIIPSFMIQGGDFTHGNGMGGESIYGQKFADENFKLKHTGPGFLSMANSGEDTNGSQFFITTVTTSWLDGRHVVFGKVVQGMDVVYKIEAEGKQSGTPKSKVVIADSGEL 199
BLAST of NO10G02370 vs. NCBI_GenBank
Match: XP_024003978.1 (peptidyl-prolyl cis-trans isomerase CYP19-4 [Eutrema salsugineum]) HSP 1 Score: 285.0 bits (728), Expect = 1.700e-73 Identity = 140/199 (70.35%), Postives = 160/199 (80.40%), Query Frame = 0 Query: 2 LSKTFSFLAG----MAALA-VSAADDATKVTHKVFFDINVGDKPAGRIVFGLYGNTVPKTVENFRALCTGEKGMGKQGHELTYKGSKFHRVIPSFMLQGGDFTHGNGMGGESIYGAKFADENFTLKHSRPGLLSMANAGRDTNGSQFFITTVVTSWLDGRHVVFGEVLEGMDVVKMIEGLGSNDGTVKTPVVIADSGEL 196 ++K S L G AALA + A +D ++THKV+FD+ + K AGR+V GL+G TVPKT ENFRALCTGEKG+GK G L YKGSKFHR+IPSFM+QGGDFTHGNGMGGESIYG KFADENF LKH+ PGLLSMAN+G DTNGSQFFITTV TSWLDGRHVVFG+V++GMDVV IE G GT K+ VVIADSGEL Sbjct: 1 MAKASSILLGTLLLFAALAFIQAKEDLKEITHKVYFDVEIEGKDAGRVVIGLFGKTVPKTAENFRALCTGEKGVGKSGKPLHYKGSKFHRIIPSFMIQGGDFTHGNGMGGESIYGQKFADENFKLKHTGPGLLSMANSGEDTNGSQFFITTVKTSWLDGRHVVFGKVVQGMDVVYKIEAEGKQSGTPKSKVVIADSGEL 199
BLAST of NO10G02370 vs. NCBI_GenBank
Match: XP_018439091.1 (PREDICTED: peptidyl-prolyl cis-trans isomerase CYP19-4 [Raphanus sativus]) HSP 1 Score: 284.3 bits (726), Expect = 3.000e-73 Identity = 136/184 (73.91%), Postives = 153/184 (83.15%), Query Frame = 0 Query: 13 AALA-VSAADDATKVTHKVFFDINVGDKPAGRIVFGLYGNTVPKTVENFRALCTGEKGMGKQGHELTYKGSKFHRVIPSFMLQGGDFTHGNGMGGESIYGAKFADENFTLKHSRPGLLSMANAGRDTNGSQFFITTVVTSWLDGRHVVFGEVLEGMDVVKMIEGLGSNDGTVKTPVVIADSGEL 196 AALA V A +D ++THKV+FD+ + K AGR+V GL+G TVPKT ENFRALCTGEKG+GK G L YKGSKFHR+IPSFM+QGGDFTHGNGMGGESIYG KFADENF LKH+ PG LSMAN+G DTNGSQFFITTV TSWLDGRHVVFG+V++GMDVV IE G GT K+ VVIADSGEL Sbjct: 16 AALALVQAKEDPKEITHKVYFDVEIDGKEAGRVVIGLFGKTVPKTAENFRALCTGEKGVGKSGKPLHYKGSKFHRIIPSFMIQGGDFTHGNGMGGESIYGQKFADENFKLKHTGPGFLSMANSGEDTNGSQFFITTVTTSWLDGRHVVFGKVVQGMDVVYKIEAEGKQSGTPKSKVVIADSGEL 199
BLAST of NO10G02370 vs. NCBI_GenBank
Match: XP_009144343.1 (PREDICTED: peptidyl-prolyl cis-trans isomerase CYP19-4 [Brassica rapa] >XP_013730402.1 peptidyl-prolyl cis-trans isomerase CYP19-4 [Brassica napus] >CDY58941.1 BnaAnng15590D [Brassica napus]) HSP 1 Score: 283.9 bits (725), Expect = 3.900e-73 Identity = 133/189 (70.37%), Postives = 153/189 (80.95%), Query Frame = 0 Query: 7 SFLAGMAALAVSAADDATKVTHKVFFDINVGDKPAGRIVFGLYGNTVPKTVENFRALCTGEKGMGKQGHELTYKGSKFHRVIPSFMLQGGDFTHGNGMGGESIYGAKFADENFTLKHSRPGLLSMANAGRDTNGSQFFITTVVTSWLDGRHVVFGEVLEGMDVVKMIEGLGSNDGTVKTPVVIADSGEL 196 + L + + A +D ++THKV+FD+ + K AGR+V GL+G TVPKT ENFRALCTGEKG+GK G L YKGSKFHR+IPSFM+QGGDFTHGNGMGGESIYG KFADENF LKH+ PGLLSMAN+G DTNGSQFFITTV TSWLDGRHVVFG+V++GMDVV IE G GT K+ VVIADSGEL Sbjct: 11 TLLLSASLALIQAKEDLKEITHKVYFDVEIDGKEAGRVVIGLFGKTVPKTAENFRALCTGEKGVGKSGKPLHYKGSKFHRIIPSFMIQGGDFTHGNGMGGESIYGQKFADENFKLKHTGPGLLSMANSGEDTNGSQFFITTVTTSWLDGRHVVFGKVVQGMDVVYKIEAEGKQSGTPKSKVVIADSGEL 199
BLAST of NO10G02370 vs. NCBI_GenBank
Match: XP_020885477.1 (peptidyl-prolyl cis-trans isomerase CYP19-4 [Arabidopsis lyrata subsp. lyrata] >EFH57336.1 cyclophilin [Arabidopsis lyrata subsp. lyrata]) HSP 1 Score: 283.1 bits (723), Expect = 6.600e-73 Identity = 135/188 (71.81%), Postives = 153/188 (81.38%), Query Frame = 0 Query: 8 FLAGMAALAVSAADDATKVTHKVFFDINVGDKPAGRIVFGLYGNTVPKTVENFRALCTGEKGMGKQGHELTYKGSKFHRVIPSFMLQGGDFTHGNGMGGESIYGAKFADENFTLKHSRPGLLSMANAGRDTNGSQFFITTVVTSWLDGRHVVFGEVLEGMDVVKMIEGLGSNDGTVKTPVVIADSGEL 196 FL G AL + A +D ++THKV+FD+ + K AGR+V GL+G VPKT ENFRALCTGEKG+GK G L YKGSKFHR+IPSFM+QGGDFTHGNGMGGESIYG KF DENF LKH+ PGLLSMAN+G DTNGSQFFITTV TSWLDGRHVVFG+V++GMDVV IE G GT K+ VVIADSGEL Sbjct: 13 FLFGAIAL-IQAKEDLKEITHKVYFDVEIDGKSAGRVVIGLFGKAVPKTAENFRALCTGEKGVGKSGKPLHYKGSKFHRIIPSFMIQGGDFTHGNGMGGESIYGQKFEDENFKLKHTGPGLLSMANSGEDTNGSQFFITTVTTSWLDGRHVVFGKVVQGMDVVYKIEAEGKQSGTPKSKVVIADSGEL 199
BLAST of NO10G02370 vs. NCBI_GenBank
Match: NP_180557.1 (cyclophilin 5 [Arabidopsis thaliana] >NP_001318316.1 cyclophilin 5 [Arabidopsis thaliana] >Q8LDP4.2 RecName: Full=Peptidyl-prolyl cis-trans isomerase CYP19-4; Short=PPIase CYP19-4; AltName: Full=Cyclophilin of 19 kDa 4; AltName: Full=Cyclophilin-5; AltName: Full=Rotamase CYP19-4; Flags: Precursor >AAC31856.1 cyclophilin [Arabidopsis thaliana] >AAK96784.1 cyclophilin [Arabidopsis thaliana] >AAN15387.1 cyclophilin [Arabidopsis thaliana] >AEC08327.1 cyclophilin 5 [Arabidopsis thaliana] >ANM62829.1 cyclophilin 5 [Arabidopsis thaliana]) HSP 1 Score: 283.1 bits (723), Expect = 6.600e-73 Identity = 135/188 (71.81%), Postives = 154/188 (81.91%), Query Frame = 0 Query: 8 FLAGMAALAVSAADDATKVTHKVFFDINVGDKPAGRIVFGLYGNTVPKTVENFRALCTGEKGMGKQGHELTYKGSKFHRVIPSFMLQGGDFTHGNGMGGESIYGAKFADENFTLKHSRPGLLSMANAGRDTNGSQFFITTVVTSWLDGRHVVFGEVLEGMDVVKMIEGLGSNDGTVKTPVVIADSGEL 196 FL G A ++ A +D +VTHKV+FD+ + K AGR+V GL+G VPKT ENFRALCTGEKG+GK G L YKGSKFHR+IPSFM+QGGDFTHGNGMGGESIYG KFADENF LKH+ PG+LSMAN+G DTNGSQFFITTV TSWLDGRHVVFG+V++GMDVV IE G GT K+ VVIADSGEL Sbjct: 13 FLFG-AIASIQAKEDLKEVTHKVYFDVEIDGKSAGRVVIGLFGKAVPKTAENFRALCTGEKGVGKSGKPLHYKGSKFHRIIPSFMIQGGDFTHGNGMGGESIYGQKFADENFKLKHTGPGVLSMANSGEDTNGSQFFITTVTTSWLDGRHVVFGKVVQGMDVVYKIEAEGKQSGTPKSKVVIADSGEL 199 The following BLAST results are available for this feature:
BLAST of NO10G02370 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO10G02370 ID=NO10G02370|Name=NO10G02370|organism=Nannochloropsis oceanica|type=gene|length=3149bpback to top protein sequence of NO10G02370.1 >NO10G02370.1-protein ID=NO10G02370.1-protein|Name=NO10G02370.1|organism=Nannochloropsis oceanica|type=polypeptide|length=197bpback to top Synonyms
Publications
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