NO10G02180, NO10G02180 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO10G02180 vs. NCBI_GenBank
Match: EWM25356.1 (mitochondrial import inner membrane translocase subunit tim23 [Nannochloropsis gaditana]) HSP 1 Score: 331.3 bits (848), Expect = 2.100e-87 Identity = 160/180 (88.89%), Postives = 169/180 (93.89%), Query Frame = 0 Query: 18 DSDLPRIDLFGTGNVDLRTVAPLYGVTSEEEPDYLDYDIKGRGTVERMFLYSGSSYLTGILTGGVLGGRVGWKTAPSPRFWLRLNSVMNGAGKLGSKWGNNAGVFALMYSLSESALDHFETDQFLGGHQATNPVLAGAISGLLYKCTAAPRTAALALVLGGAGAGAFYVMRGQMERFYYR 198 D +LP+IDLFG GNVDLRTVAPLYGV SEEEPDYLDYDIKGRGTVERMFLYSGSSYLTGILTGG+LGGR GWKTAPSPRFWLRLNSVMNGAGKLGSKWGNNAGVFALMYSLSES LDHFETD+ LGGHQA NPVL+GAISGLLYK TAAPRTAALA VLGG GAG FYV+RGQ++RF+YR Sbjct: 80 DDNLPKIDLFGGGNVDLRTVAPLYGVASEEEPDYLDYDIKGRGTVERMFLYSGSSYLTGILTGGILGGRRGWKTAPSPRFWLRLNSVMNGAGKLGSKWGNNAGVFALMYSLSESLLDHFETDKVLGGHQAVNPVLSGAISGLLYKSTAAPRTAALASVLGGFGAGMFYVIRGQLDRFFYR 259
BLAST of NO10G02180 vs. NCBI_GenBank
Match: CBJ48753.1 (Mitochondrial import inner membrane translocase subunit TIM23 homolog [Ectocarpus siliculosus]) HSP 1 Score: 134.4 bits (337), Expect = 3.800e-28 Identity = 78/163 (47.85%), Postives = 102/163 (62.58%), Query Frame = 0 Query: 31 NVDLRTVAPLYGVTSE-EEPDYLDYDIKGRGTVERMFLYSGSSYLTGILTGGVLGGRVGWKTAPSPRFWLRLNSVMNGAGKLGSKWGNNAGVFALMYSLSESALDHFETDQF-----LGGHQATNPVLAGAISGLLYKCTAAPRTAALALVLGGAGAGAFYVM 188 NVDL + +YG ++ +EP+YLDY+IKGRG ERM +G+ Y+TGIL GG G R G+ AP+ R + LNS+MN AGK GS +GN V A Y+ +E+ LDHFE DQ G + NP+LAGA +GLLYK +A PR A +A V G G Y + Sbjct: 33 NVDL---SKMYGGAAQGKEPEYLDYNIKGRGFWERMPYNAGALYITGILGGGAAGVREGFAKAPNRRSRVLLNSIMNHAGKKGSFYGNTFAVLATYYTCAETLLDHFEVDQMGPVQQAGLGEIINPLLAGASTGLLYKSSAGPRLALMASVAGLGAVGVAYAV 192
BLAST of NO10G02180 vs. NCBI_GenBank
Match: XP_002180317.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC48508.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 131.3 bits (329), Expect = 3.200e-27 Identity = 73/175 (41.71%), Postives = 96/175 (54.86%), Query Frame = 0 Query: 18 DSDLPRIDLFGTGNVDLRTVAPLYGVTSEEEPDYLDYDIKGRGTVERMFLYSGSSYLTGILTGGVLGGRVGWKTAPSPRFWLRLNSVMNGAGKLGSKWGNNAGVFALMYSLSESALDHFETDQFLGGHQAT-------NPVLAGAISGLLYKCTAAPRTAALALVLGGAGAGAFY 186 D+ P D F T + L TVAP GV + PDYLDYD KGRG + MF +G SY+ G GGV G R G PS RF ++LNSV+N +G+ GS+ GN GVFA++YSL E DH++ ++ LG + +P ++G Y + PR AALA LG Y Sbjct: 11 DTGAPLPD-FRTSGIQLHTVAPALGVIGKNTPDYLDYDTKGRGIIVTMFANAGMSYVLGTTFGGVYGVRQGLVATPSNRFRVKLNSVLNHSGRYGSRAGNTLGVFAVLYSLYEGLADHYDLEETLGVRDISPAAASFVSPAFGAVMAGATYYGPSGPRVAALAGALGFGSVAVTY 184
BLAST of NO10G02180 vs. NCBI_GenBank
Match: GAY00899.1 (prohibitin-2 [Pythium insidiosum]) HSP 1 Score: 130.6 bits (327), Expect = 5.500e-27 Identity = 71/179 (39.66%), Postives = 108/179 (60.34%), Query Frame = 0 Query: 20 DLPRIDLFGTGNVDLRTVAPLYGVTSEEE-PDYLDYDIKGRGTVERMFLYSGSSYLTGILTGGVLGGRVGWKTAPSPRFWLRLNSVMNGAGKLGSKWGNNAGVFALMYSLSESALDHFETDQFLGGHQATNPVLAGAISGLLYKCTAAPRTAALALVLGGAGAGAFYVMRGQMERFYYR 198 D P + +G++DL +AP++GV +++ DYLDYD GR +E++ G++Y TGI+ GG+ G G+ +PSP+F +R+NS++NGAG GSK GN G A++Y E D E +++ Q T P+LA A +G+ YK TA P+ LA G GAG V++ ++ FY R Sbjct: 359 DFPVLPTIPSGSIDLGAIAPVFGVAYDDDVADYLDYDKAGRPFLEQVNASCGTAYFTGIIGGGLFGAAQGFARSPSPKFKIRMNSLLNGAGLRGSKAGNALGCLAMIYKGFEYVADTVELERYAKFDQVT-PILASAATGVFYKSTAGPKAMVLA---GALGAGLMTVVQFGVKPFYPR 533
BLAST of NO10G02180 vs. NCBI_GenBank
Match: CCA22599.1 (Mitochondrial Protein Translocase (MPT) Family puta [Albugo laibachii Nc14]) HSP 1 Score: 129.8 bits (325), Expect = 9.300e-27 Identity = 74/171 (43.27%), Postives = 103/171 (60.23%), Query Frame = 0 Query: 20 DLPRIDLFGTGNVDLRTVAPLYGVTSEEE--PDYLDYDIKGRGTVERMFLYSGSSYLTGILTGGVLGGRVGWKTAPSPRFWLRLNSVMNGAGKLGSKWGNNAGVFALMYSLSESALDHFETDQFLGGHQATNPVLAGAISGLLYKCTAAPRTAALALVLGGAGAGAFYVMR 189 + P + +G++D+ TVAP++GV ++ DYL+YD GR +E + GS+Y TGI+ GG+ G G + APSP+F +RLNSVMN A GSK GN G AL+Y E D E ++F+ Q T P+LA A +GL YK TA P+ LA GG GAGA +++ Sbjct: 49 EFPLLPSIPSGSIDIGTVAPVFGVAGFDDNGADYLEYDKAGRPFMELVQTSCGSAYFTGIIGGGLYGATQGLRKAPSPKFKIRLNSVMNQAALRGSKAGNALGCLALIYKGFEQLADTIELERFVKYDQVT-PILASAATGLFYKSTAGPKAMVLA---GGMGAGAMTLLQ 215
BLAST of NO10G02180 vs. NCBI_GenBank
Match: EJK64388.1 (hypothetical protein THAOC_14881 [Thalassiosira oceanica]) HSP 1 Score: 127.5 bits (319), Expect = 4.600e-26 Identity = 76/181 (41.99%), Postives = 102/181 (56.35%), Query Frame = 0 Query: 18 DSDLPRIDLFGTGNVDLRTVAPLYGVTSE------EEPDYLDYDIKGRGTVERMFLYSGSSYLTGILTGGVLGGRVGWKTAPSPRFWLRLNSVMNGAGKLGSKWGNNAGVFALMYSLSESALDHFETDQFLGGHQATNPVLAGAISGLLYKCTAAPRTAALALVLGGAGAG---AFYVMRG 190 DS P D F N+ L+TVAP +G++S +PDYL+YD + RG MF SG SY+ G+ GG+ G R G PS RF ++LNS++N G+ GS GN G +++YSL E D ++ DQ+ G Q P+ AGA++G Y A PR AALA +G A G A Y M G Sbjct: 24 DSGAPLPD-FNASNIKLQTVAPAFGISSSSLPAGVSQPDYLEYD-QSRGVTTIMFTNSGISYMLGVTLGGLYGLREGLAKTPSSRFKVKLNSILNHCGRNGSVVGNMLGATSILYSLYEGLADTYDLDQYTGPIQPPAPLFAGAMTGATYYMRAGPRVAALAGSIGLASVGGTFAIYSMLG 202
BLAST of NO10G02180 vs. NCBI_GenBank
Match: XP_009531028.1 (hypothetical protein PHYSODRAFT_354995 [Phytophthora sojae] >EGZ13599.1 hypothetical protein PHYSODRAFT_354995 [Phytophthora sojae]) HSP 1 Score: 126.3 bits (316), Expect = 1.000e-25 Identity = 69/179 (38.55%), Postives = 105/179 (58.66%), Query Frame = 0 Query: 20 DLPRIDLFGTGNVDLRTVAPLYGVTS-EEEPDYLDYDIKGRGTVERMFLYSGSSYLTGILTGGVLGGRVGWKTAPSPRFWLRLNSVMNGAGKLGSKWGNNAGVFALMYSLSESALDHFETDQFLGGHQATNPVLAGAISGLLYKCTAAPRTAALALVLGGAGAGAFYVMRGQMERFYYR 198 + P + +G++D+ +AP++GV S +++ DYLDYD GR +E+M G++Y +GI+ GG G G+ +PS +F +R+NS+MNGA GSK GN G A++Y E D E + + Q T P+LA A +G+ YK TA P+ LA G GAG V++ ++ FY R Sbjct: 33 EFPVLPTIPSGSIDIGAIAPVFGVASYDDDADYLDYDKAGRPFMEQMSGSCGTAYFSGIIGGGAYGALTGFARSPSTKFKIRMNSLMNGAATRGSKAGNALGCLAMIYKAFEYVADSAEIENIVKFDQVT-PILASAATGVFYKSTAGPKAMVLA---GALGAGVMTVVQFGIKPFYPR 207
BLAST of NO10G02180 vs. NCBI_GenBank
Match: XP_024577951.1 (mitochondrial protein translocase family [Plasmopara halstedii] >CEG41582.1 mitochondrial protein translocase family [Plasmopara halstedii]) HSP 1 Score: 125.6 bits (314), Expect = 1.800e-25 Identity = 70/177 (39.55%), Postives = 105/177 (59.32%), Query Frame = 0 Query: 22 PRIDLFGTGNVDLRTVAPLYGV-TSEEEPDYLDYDIKGRGTVERMFLYSGSSYLTGILTGGVLGGRVGWKTAPSPRFWLRLNSVMNGAGKLGSKWGNNAGVFALMYSLSESALDHFETDQFLGGHQATNPVLAGAISGLLYKCTAAPRTAALALVLGGAGAGAFYVMRGQMERFYYR 198 P + +G++D+ +AP++GV T +++ DYLDYD GR +E+M G++Y +GI+ GG G G+ +PS +F +R+NS+MNGA GSK GN G A++Y E D E + + Q T P+LA A +G+ YK TA P+T LA G GAG V++ ++ FY R Sbjct: 35 PVLPTIPSGSIDIGAIAPVFGVSTYDDDADYLDYDKAGRPFMEQMSGSCGTAYFSGIIGGGAYGAVRGFTRSPSTKFKIRMNSIMNGAATRGSKAGNALGCLAMIYKAFEYVADSAEIENIVKFDQVT-PILASAATGVFYKSTAGPKTMILA---GAIGAGLMTVVQFGIKPFYPR 207
BLAST of NO10G02180 vs. NCBI_GenBank
Match: XP_002903138.1 (Mitochondrial Protein Translocase (MPT) Family [Phytophthora infestans T30-4] >EEY55562.1 Mitochondrial Protein Translocase (MPT) Family [Phytophthora infestans T30-4]) HSP 1 Score: 124.8 bits (312), Expect = 3.000e-25 Identity = 68/179 (37.99%), Postives = 106/179 (59.22%), Query Frame = 0 Query: 20 DLPRIDLFGTGNVDLRTVAPLYGVTS-EEEPDYLDYDIKGRGTVERMFLYSGSSYLTGILTGGVLGGRVGWKTAPSPRFWLRLNSVMNGAGKLGSKWGNNAGVFALMYSLSESALDHFETDQFLGGHQATNPVLAGAISGLLYKCTAAPRTAALALVLGGAGAGAFYVMRGQMERFYYR 198 + P + +G++D+ ++AP++GV + +++ DYLDYD GR +E+M G++Y +GI+ GG G G+ +PS +F +R+NS+MNGA GSK GN G A++Y E D E + + Q T P+LA A +G+ YK TA P+ LA G GAG V++ ++ FY R Sbjct: 31 EFPVLPTIPSGSIDIGSIAPVFGVAAYDDDADYLDYDKTGRPFMEQMSGSCGTAYFSGIIGGGAYGALKGFSRSPSTKFKIRMNSLMNGAATRGSKAGNALGCLAMVYKAFEYVADSAEIENIVKFDQVT-PILASAATGVFYKSTAGPKAMVLA---GALGAGLMTVVQFGIKPFYPR 205
BLAST of NO10G02180 vs. NCBI_GenBank
Match: GBG25151.1 (Mitochondrial import inner membrane translocase subunit Tim23 [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 124.8 bits (312), Expect = 3.000e-25 Identity = 68/169 (40.24%), Postives = 98/169 (57.99%), Query Frame = 0 Query: 30 GNVDLRTVAPLYGV-------TSEEEPDYLDYDIKGRGTVERMFLYSGSSYLTGILTGGVLGGRVGWKTAPSPRFWLRLNSVMNGAGKLGSKWGNNAGVFALMYSLSESALDHFETDQFLGGHQATNPVLAGAISGLLYKCTAAPRTAALALVLGGAGAGAFYVMRGQM 192 G V+ T++P++G T +P+YL Y+ K ERM SG +YL GI GG G G TAPS +F +R+NS++N +G+ GS++GN G A+MYS E+A + + ++GG + NPVLA ++GLLYKCT P+T ALA ++GG R M Sbjct: 668 GAVNPSTLSPMFGAGAQGGVGTGAYKPEYLHYEPK--AWHERMCYNSGIAYLGGIGVGGAYGVVNGLMTAPSSKFKIRVNSILNKSGRYGSRFGNALGAVAMMYSCIEAATETMHIEDYVGGDEIVNPVLAATLTGLLYKCTQGPKTMALAGIIGGTAVAGLTTARSFM 834 The following BLAST results are available for this feature:
BLAST of NO10G02180 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO10G02180 ID=NO10G02180|Name=NO10G02180|organism=Nannochloropsis oceanica|type=gene|length=1061bpback to top protein sequence of NO10G02180.1 >NO10G02180.1-protein ID=NO10G02180.1-protein|Name=NO10G02180.1|organism=Nannochloropsis oceanica|type=polypeptide|length=198bpback to top Synonyms
Publications
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