NO10G02110, NO10G02110 (gene) Nannochloropsis oceanica

Overview
NameNO10G02110
Unique NameNO10G02110
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2922
Alignment locationchr10:580345..583266 +

Link to JBrowse

Properties
Property NameValue
DescriptionLycopene beta cyclase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:580345..583266 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036188FAD/NAD-bd_sf
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0009058biosynthetic process
GO:0006629lipid metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Homology
[Close]
BLAST of NO10G02110 vs. NCBI_GenBank
Match: EWM25354.1 (lycopene beta cyclase [Nannochloropsis gaditana])

HSP 1 Score: 770.0 bits (1987), Expect = 5.200e-219
Identity = 376/541 (69.50%), Postives = 436/541 (80.59%), Query Frame = 0 
Query:    7 WMRFLGTLCYCLLAYAWVPQGPLRQGKRAEGSSCRRARQQQPWRAS-FVSSILLPSSRPPLRTLSKQPLSVAMESGADLTTEGVTYDVAIIGGGPAGSVMAALLAQQHKLKVVMMDPKLDERWIPNYGVWLEEWQALEKLLGFSLESCLMKVWPNTDLFCGGSHGIPADERLRVKRPYGRVDRVALKQEFRSRALNGGAVLLSMAVDPSSVVHGEEGSQLRLSDGTRINTRLLLDCSGYQSTLVELDGVHNPGVQIAYGIECEVDVCPYEEDAMTLMDYRTNYVSSSSAEAEV--AREPTFMYAMPMGPSEDGQKQKVFFEETSLVARPPISFDECKRRMELRLKHLGATVLNVEEEEFCYIPMGGAIPTRSQRVVAFGGALGLVHASTGYQICRALAAAGPAAKTIAAELRKPSYDPDVAARAVYDTVWSRTTRLQRDFFIFGGEFLMVQNAENLRGFFDSFFRLPVGMWAGFLAGWPGLPNNEFHETWGRRLIFGIQFWLLSPLSLKIALAVAGVMNGGYPFIRCVTPFAELPLSFETE 545
            W+  + +  +C  +  WV +G + +  +      R    ++P +   F + ++  SS+      + Q  +      ++   + +  DVAI+GGGPAGSVMAALLAQQH+LKVVMMDPKLD+RWIPNYGVW+EEW+ALEKLLGFSL SCLMK WPNTDLFCGGSHGIP DERLR+KR YGRVDR ALK E R+RAL+GGA+LL+ A+D  SVVH EEGS LRL DGTR+  R LLDCSGYQS LV LDG H+PGVQIAYGIECEVD+CPY EDAMTLMDYRT+Y+ + +AE ++  AREPTFMYAMPMGP+ DG+K KVFFEETSLVARPP+SFDECK+RMELRLKHLGATVLNVEEEEFCYIPMGGAIP RSQRVVAFGGA+GLVHA+TGYQICR++AAAGP AK IA EL+K SY+PD AARAVYD+VW+RTTRLQRDF IFGGEFLM Q+A+NLRGFFDSFFRLP  MW GFLAGWPGLPNNE HETW +RL FGI  WLL+PLSLK+ALA AGV  GG PFIR VTP A+LP  FE E
Sbjct:  276 WLHIICSFMFCGASMGWVARGLVSKHDKPSCLVNRNPTARKPKQLPLFPAPVVSESSQTHFLRSNAQFSAKETIECSNSAMKPIVCDVAIVGGGPAGSVMAALLAQQHELKVVMMDPKLDQRWIPNYGVWVEEWEALEKLLGFSLRSCLMKTWPNTDLFCGGSHGIPVDERLRIKRAYGRVDRTALKNELRTRALDGGAILLAKALDAESVVHDEEGSLLRLDDGTRVRARFLLDCSGYQSRLVTLDGTHDPGVQIAYGIECEVDMCPYGEDAMTLMDYRTDYLDNQAAEVQMTAAREPTFMYAMPMGPTRDGKKTKVFFEETSLVARPPMSFDECKKRMELRLKHLGATVLNVEEEEFCYIPMGGAIPVRSQRVVAFGGAMGLVHAATGYQICRSMAAAGPTAKAIADELKKASYNPDAAARAVYDSVWTRTTRLQRDFVIFGGEFLMAQHADNLRGFFDSFFRLPSLMWTGFLAGWPGLPNNEQHETWDKRLEFGISLWLLAPLSLKLALAAAGVTKGGLPFIRSVTPLADLPSFFELE 816
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BLAST of NO10G02110 vs. NCBI_GenBank
Match: ATD53301.1 (lycopene beta-cyclase [Sargassum thunbergii])

HSP 1 Score: 514.6 bits (1324), Expect = 4.000e-142
Identity = 263/470 (55.96%), Postives = 325/470 (69.15%), Query Frame = 0 
Query:   75 SVAMESGADLTTEGVTYDVAIIGGGPAGSVMAALLAQQHKLKVVMMDPKLDERWIPNYGVWLEEWQALEKLLGFSLESCLMKVWPNTDLFCGGSHGIPADERLRVKRPYGRVDRVALKQEFRSRALNGGAVLLSMAVDPSSVVHGEEGSQLRLSDGTRINTRLLLDCSGYQSTLVELDGVHNPGVQIAYGIECEV--DVCPYEEDAMTLMDYRTNYVSSSSAEAEVARE----PTFMYAMPMGPSEDGQKQKVFFEETSLVARPPISFDECKRRMELRLKHLGATVLNVEEEEFCYIPMGGAIPTRSQRVVAFGGALGLVHASTGYQICRALAAAGPAAKTIAAELRKPSYD--PDVAARAVYDTVWSRTTRLQRDFFIFGGEFLMVQNAENLRGFFDSFFRLPVGMWAGFLAGWPGLPNNEFHETWGRRLIFGIQFWLLSPLSLKIALAVAGVMNG-GYPFIRCVTPFA 536
            S A   G     + V YD AI+G GPAG VMA LLA++H LKV ++DP L++RWIPNYGVWLEEW+AL+K L   L  CL + W  TD F GGS+G+P  ER R+KR YGRV R  ++   ++R  + G   +   VDP +V H  EG+ LRL DG RI+ RLL+DCSG++S LVE  GV NPGVQIAYG E EV     PY+E+AM  MDYRT+YV+ +   A+  RE    PTF+YAMP+G S +G ++K+FFEETSLVARPPISFD CK R++ RLKH G TV  V +EEFCYIPMGGA+P   QRVVAFGGA  LVHA+TGY   R LAAAG  A+ IA+EL K  +    + AAR  Y  +W    RLQRDF +FGGEFLM Q+A  LRGFFD FFRLP+ +WAGFL+G+P LP+NE H+ W  RL FG QF+L  P  +++ L  AGV+NG  Y  IR V+P A
Sbjct:   15 SAAGNGGNSERRKDVVYDAAIVGYGPAGGVMATLLAEKHGLKVCIIDPNLEKRWIPNYGVWLEEWEALDKDLQIGLGDCLERTWEVTDSFFGGSNGVPPGERCRIKRAYGRVSRDKMQANLKARLSSAGVAKIRGRVDPKTVEHSTEGTSLRLDDGERIDCRLLVDCSGHRSELVERSGVDNPGVQIAYGAEVEVLDGHAPYDENAMLFMDYRTDYVAETELSADELRELDEVPTFLYAMPLGKSPNG-RRKIFFEETSLVARPPISFDLCKERLDRRLKHHGITVAKVLDEEFCYIPMGGAMPKLDQRVVAFGGAAALVHAATGYMQVRMLAAAGGVARAIASELTKEDHPAASEAAARRAYQALWPAKARLQRDFHVFGGEFLMAQHAPILRGFFDGFFRLPLPLWAGFLSGYPNLPHNELHQDWQGRLGFGFQFFLKLPPLVQLQLMKAGVLNGWRYGLIRSVSPLA 483
[Close]
BLAST of NO10G02110 vs. NCBI_GenBank
Match: ATD53304.1 (lycopene beta-cyclase [Sargassum hemiphyllum var. chinense])

HSP 1 Score: 512.3 bits (1318), Expect = 2.000e-141
Identity = 264/480 (55.00%), Postives = 332/480 (69.17%), Query Frame = 0 
Query:   66 LRTLSKQPLSVAMESGADL-TTEGVTYDVAIIGGGPAGSVMAALLAQQHKLKVVMMDPKLDERWIPNYGVWLEEWQALEKLLGFSLESCLMKVWPNTDLFCGGSHGIPADERLRVKRPYGRVDRVALKQEFRSRALNGGAVLLSMAVDPSSVVHGEEGSQLRLSDGTRINTRLLLDCSGYQSTLVELDGVHNPGVQIAYGIECEV--DVCPYEEDAMTLMDYRTNYVSSSSAEAEVARE----PTFMYAMPMGPSEDGQKQKVFFEETSLVARPPISFDECKRRMELRLKHLGATVLNVEEEEFCYIPMGGAIPTRSQRVVAFGGALGLVHASTGYQICRALAAAGPAAKTIAAELRKPSYD--PDVAARAVYDTVWSRTTRLQRDFFIFGGEFLMVQNAENLRGFFDSFFRLPVGMWAGFLAGWPGLPNNEFHETWGRRLIFGIQFWLLSPLSLKIALAVAGVMNG-GYPFIRCVTPFA 536
            L  + +Q L  A  +G +  T + V YD AI+G GPAG VMA LLA++H LKV ++DP L++RWIPNYGVWLEEW+AL++ L   L  CL + W  TD F GGS+G+P  ER R+KR YGRV R  ++   ++R  + G   +   VDP +V H  EG+ LRL DG RI+ RLL+DCSG++S LV   GV NPGVQIAYG E EV     PY+E+AM  MDYRT+YV+ +   A+  RE    PTF+YAMP+G S +G ++K+FFEETSLVARPPISFD CK R++ RLKH G TV  V +EEFCYIPMGGA+P  +QRVVAFGGA  LVHA+TGY   R LAAAG  A+ IA+EL K  +    + AAR  Y  +W    RLQRDF +FGGEFLM Q+A  LRGFFD FFRLP+ +WAGFL+G+P LP+NE H+ W  RL FG QF+L  P  +++ L  AGV+NG  Y  IR V+P A
Sbjct:    5 LGDMMRQMLGSATGNGGNSETRKDVVYDAAIVGYGPAGGVMATLLAEKHGLKVCIIDPNLEKRWIPNYGVWLEEWEALDRDLQIGLGDCLERTWEVTDSFFGGSNGVPPGERCRIKRAYGRVSRDKMQANLKARLSSAGVAKIRGRVDPKTVEHSTEGTSLRLDDGERIDCRLLVDCSGHKSELVVRSGVDNPGVQIAYGAEVEVLDGHAPYDENAMLFMDYRTDYVAKTEISADELRELDEVPTFLYAMPLGKSPNG-RRKIFFEETSLVARPPISFDLCKERLDRRLKHHGITVAKVLDEEFCYIPMGGAMPKLNQRVVAFGGAAALVHAATGYMQVRMLAAAGGVARAIASELTKEGHPGASEAAARRAYQALWPAKARLQRDFHVFGGEFLMAQHAPILRGFFDGFFRLPLPLWAGFLSGYPNLPHNELHQDWQGRLGFGFQFFLKLPPLVQLQLMKAGVLNGWRYGLIRSVSPLA 483
[Close]
BLAST of NO10G02110 vs. NCBI_GenBank
Match: ATD53300.1 (lycopene beta-cyclase [Sargassum vachellianum])

HSP 1 Score: 505.8 bits (1301), Expect = 1.800e-139
Identity = 265/481 (55.09%), Postives = 333/481 (69.23%), Query Frame = 0 
Query:   66 LRTLSKQPL-SVAMESGADLTTEGVTYDVAIIGGGPAGSVMAALLAQQHKLKVVMMDPKLDERWIPNYGVWLEEWQALEKLLGFSLESCLMKVWPNTDLFCGGSHGIPADERLRVKRPYGRVDRVALKQEFRSRALNGGAVLLSMAVDPSSVVHGEEGSQLRLSDGTRINTRLLLDCSGYQSTLVELDGVHNPGVQIAYGIECEV--DVCPYEEDAMTLMDYRTNYVSSSSAEAEVARE----PTFMYAMPMGPSEDGQKQKVFFEETSLVARPPISFDECKRRMELRLKHLGATVLNVEEEEFCYIPMGGAIPTRSQRVVAFGGALGLVHASTGYQICRALAAAGPAAKTIAAELRKPSYD--PDVAARAVYDTVWSRTTRLQRDFFIFGGEFLMVQNAENLRGFFDSFFRLPVGMWAGFLAGWPGLPNNEFHETWGRRLIFGIQFWL-LSPLSLKIALAVAGVMNG-GYPFIRCVTPFA 536
            L  + KQ L S A   G     + V YDVAI+G GPAG VMA LLA++H L V ++DP L++RWIPNYGVWLEEW+AL++ L   L  CL + W  TD F GGS+G+P  ER R++R YGRV R  ++   ++R  + G   +   VDP +V H  EG+ LRL DG RI+ RLL+DCSG++S LVE  GV NPGVQIAYG E EV     PY+E+AM  MDYRT+YV  +   A+  RE    PTF+YAMP+G + +G ++K+FFEETSLVARPPISFD CK R++ RLKH G  V  V +EEFCYIPMGGA+P  +QRVVAFGGA  LVHA+TGY   R LAAAG  A+ IA+EL K  Y    + AAR  Y  +W    RLQRDF +FGGEFLM Q+A  LRGFFD FF+LP+ +WAGFL+G+P LP+NE H+ W  RL FG QF+L L+PL +++ L +AGV+NG  Y  IR V+P A
Sbjct:    5 LGDMMKQMLGSAAGNGGNSERRKDVVYDVAIVGYGPAGGVMATLLAEKHGLNVCIIDPSLEKRWIPNYGVWLEEWEALDRDLQIGLGDCLERTWEMTDSFFGGSNGVPPGERCRIQRAYGRVSRDKMQANLKARLSSAGGTKIRGRVDPKTVEHFTEGTSLRLDDGERIDCRLLVDCSGHRSELVERSGVDNPGVQIAYGAEVEVIDGHAPYDENAMLFMDYRTDYVVKTELSADELRELDEVPTFLYAMPLGKAANG-RRKIFFEETSLVARPPISFDLCKERLDRRLKHHGIKVAKVLDEEFCYIPMGGAMPKLNQRVVAFGGAASLVHAATGYMQVRMLAAAGGVARAIASELTKEGYPGASEAAARRAYRALWPAKARLQRDFHVFGGEFLMAQHAPILRGFFDGFFKLPLPLWAGFLSGYPNLPHNELHQDWQGRLGFGFQFFLKLAPL-VQLQLVMAGVLNGWRYGLIRSVSPLA 483
[Close]
BLAST of NO10G02110 vs. NCBI_GenBank
Match: ATD53297.1 (lycopene beta-cyclase [Punctaria latifolia])

HSP 1 Score: 497.3 bits (1279), Expect = 6.500e-137
Identity = 248/456 (54.39%), Postives = 318/456 (69.74%), Query Frame = 0 
Query:   89 VTYDVAIIGGGPAGSVMAALLAQQHKLKVVMMDPKLDERWIPNYGVWLEEWQALEKLLGFSLESCLMKVWPNTDLFCGGSHGIPADERLRVKRPYGRVDRVALKQEFRSRALNGGAVLLSMAVDPSSVVHGEEGSQLRLSDGTRINTRLLLDCSGYQSTLVELDGVHNPGVQIAYGIECEV--DVCPYEEDAMTLMDYRTNYVSSSSAEAEVARE----PTFMYAMPMGPSEDGQKQKVFFEETSLVARPPISFDECKRRMELRLKHLGATVLNVEEEEFCYIPMGGAIPTRSQRVVAFGGALGLVHASTGYQICRALAAAGPAAKTIAAELRKPS-YDPDVAARAVYDTVWSRTTRLQRDFFIFGGEFLMVQNAENLRGFFDSFFRLPVGMWAGFLAGWPGLPNNEFHETWGRRLIFGIQFWLLSPLSLKIALAVAGVMNG-GYPFIRCVTPFAE 537
            V YD AI+G GPAG VMA LLA++H LKV ++DP L++RWIPNYGVW+EEW++L+K L   L  CL + W  TD + GGSHG+PADER R+ RPY RV R  ++   +SR    G   ++  VD  ++ H  EG+ + L +G +I+ RLL+DCSG+ S LVE  G HNPGVQIAYG E EV     PY+E+AM  MDYRT+YV  +   AE A+     PTF+YAMPMG + +G+K K+FFEETSLVARPPISFD CK R+  RLKH G  V  V +EE CYIPMGGA+P  +QRVVAFGGA GLVHA+TGY   R LAA+GP ++ IAAEL+K      + AAR  Y  +W    +LQRDF +FGGEFLM Q A  LRGFF+ FF++P+ +WAGFL+G+P LP+NE H+TW +R  FG+QF+     +++  LA+AG ++G  Y  I  VTP AE
Sbjct:   33 VLYDAAIVGYGPAGGVMATLLAEKHGLKVCIIDPNLEKRWIPNYGVWVEEWESLDKDLQIGLGDCLDRKWEVTDSYFGGSHGVPADERCRIDRPYARVSRDKMQANLKSRLAAAGVTKITGKVDAKTMEHSPEGTSVCLENGQQIDCRLLVDCSGHYSELVERVGEHNPGVQIAYGAEVEVKDGHAPYDENAMLFMDYRTDYVDKADLSAEEAKGLDEIPTFLYAMPMGTASNGRK-KIFFEETSLVARPPISFDLCKERLHRRLKHHGIEVTKVMDEELCYIPMGGAMPNLNQRVVAFGGASGLVHAATGYMHVRMLAASGPVSRAIAAELKKGGPGTSEAAARRAYQALWPAKAKLQRDFHVFGGEFLMAQQAPILRGFFNGFFKVPLPLWAGFLSGYPNLPHNEMHQTWQKRFNFGLQFFFKLAPAVQFQLALAGALSGWQYGLIAAVTPLAE 487
[Close]
BLAST of NO10G02110 vs. NCBI_GenBank
Match: ATD53295.1 (lycopene beta-cyclase [Petalonia fascia])

HSP 1 Score: 495.4 bits (1274), Expect = 2.500e-136
Identity = 250/464 (53.88%), Postives = 319/464 (68.75%), Query Frame = 0 
Query:   81 GADLTTEGVTYDVAIIGGGPAGSVMAALLAQQHKLKVVMMDPKLDERWIPNYGVWLEEWQALEKLLGFSLESCLMKVWPNTDLFCGGSHGIPADERLRVKRPYGRVDRVALKQEFRSRALNGGAVLLSMAVDPSSVVHGEEGSQLRLSDGTRINTRLLLDCSGYQSTLVELDGVHNPGVQIAYGIECEV--DVCPYEEDAMTLMDYRTNYVSSSSAEAEVARE----PTFMYAMPMGPSEDGQKQKVFFEETSLVARPPISFDECKRRMELRLKHLGATVLNVEEEEFCYIPMGGAIPTRSQRVVAFGGALGLVHASTGYQICRALAAAGPAAKTIAAELRKPS-YDPDVAARAVYDTVWSRTTRLQRDFFIFGGEFLMVQNAENLRGFFDSFFRLPVGMWAGFLAGWPGLPNNEFHETWGRRLIFGIQFWLLSPLSLKIALAVAGVMNG-GYPFIRCVTPFAE 537
            GA    + V YD AI+G GPAG VMA LLA++H LKV ++DP L++RWIPNYGVW+EEW++L++ L   L  CL + W  TD F GGSHG PADER R+ RPY RV R  ++   +SR    G   ++  VD  ++ H  EG+ + L DG +I+ RLL+DCSG+ S LVE  G HNPGVQIAYG E EV     PY+E+AM  MDYRT+YV  ++   E A+     PTF+YAMPMG + +GQ+ ++FFEETSLVARPPI FD CK R+  RL+H G  V  V +EE CYIPMGGA+P+ +QRVVAFGGA GLVHA+TGY   R LAAAGP ++ IAAEL+K      + AAR  Y  +W    +LQRDF +FGGEFLM Q A  LRGFF+ FF+LP+ +WAGFL+G+P LP+NE H+ W  R  FG QF+L    +++  LA+AG ++G  Y  IR VTP AE
Sbjct:   25 GAGANGKSVVYDTAIVGYGPAGGVMATLLAEKHGLKVCIIDPNLEKRWIPNYGVWVEEWESLDRDLQIGLGDCLDRKWEVTDSFFGGSHGTPADERCRIDRPYARVSRDKMQANLKSRLSAAGVTKIAGKVDAKTMEHSAEGTSVCLEDGQKIDCRLLVDCSGHYSELVERVGDHNPGVQIAYGAEVEVKDGHAPYDENAMLFMDYRTDYVDKATLSPEDAQGLDDIPTFLYAMPMGAAPNGQR-RIFFEETSLVARPPIEFDLCKERLYRRLEHHGIEVTKVMDEELCYIPMGGAMPSLTQRVVAFGGASGLVHAATGYMHVRMLAAAGPVSRAIAAELKKGGPGTSEAAARRAYQALWPSKAKLQRDFHVFGGEFLMAQKAPMLRGFFNGFFKLPLPLWAGFLSGYPNLPHNELHQDWQSRFKFGFQFFLKLAPAVQFQLALAGALSGWKYGLIRAVTPLAE 487
[Close]
BLAST of NO10G02110 vs. NCBI_GenBank
Match: ATD53303.1 (lycopene beta-cyclase [Dictyopteris undulata])

HSP 1 Score: 491.1 bits (1263), Expect = 4.700e-135
Identity = 244/454 (53.74%), Postives = 313/454 (68.94%), Query Frame = 0 
Query:   91 YDVAIIGGGPAGSVMAALLAQQHKLKVVMMDPKLDERWIPNYGVWLEEWQALEKLLGFSLESCLMKVWPNTDLFCGGSHGIPADERLRVKRPYGRVDRVALKQEFRSRALNGGAVLLSMAVDPSSVVHGEEGSQLRLSDGTRINTRLLLDCSGYQSTLVELDGVHNPGVQIAYGIECEVDVC--PYEEDAMTLMDYRTNYVSSSSAEAEVARE----PTFMYAMPMGPSEDGQKQKVFFEETSLVARPPISFDECKRRMELRLKHLGATVLNVEEEEFCYIPMGGAIPTRSQRVVAFGGALGLVHASTGYQICRALAAAGPAAKTIAAELRKPSYD-PDVAARAVYDTVWSRTTRLQRDFFIFGGEFLMVQNAENLRGFFDSFFRLPVGMWAGFLAGWPGLPNNEFHETWGRRLIFGIQFWLLSPLSLKIALAVAGVMNG-GYPFIRCVTPFAE 537
            YDVA++G GPAG VMA LLA++H  KV ++DP L+++WIPNYGVW+EEW+AL++LL   L  CL + W  TD + GGSHG+P +ER R+ R YGRV R  ++   ++R    G   +   VD ++V H  EG+ + L DG  +  RLLLDC+G+ S LVE DGVHNPGVQIAYG E EV     PY+E AM  MDYRT+YVS     A+ A+E    PTF+YAMPMG   +G+K ++FFEETSLVARPPISFD CK R++ RL+H G  V  + +EE CYIPMGGA+P   QRVVAFGGA GLVHASTGY   R LAA+ P A  IA EL+K     P  AAR  Y  +W    +LQRDF +FGGEFLM Q+A  LRGFF+ FF++P+ +WAGFL+G+P LP NE H+ W  R  FG+QF+   P ++++ LA+AG  NG  +  ++ VTP AE
Sbjct:   37 YDVAVVGYGPAGGVMATLLAEKHGFKVCIVDPSLEKQWIPNYGVWVEEWEALDRLLQIGLGECLDRTWDVTDSYFGGSHGVPNEERCRINRAYGRVSRNKMQANLKARLDAAGVAKIKGKVDAATVKHASEGTTVCLDDGVELRCRLLLDCTGHYSELVEKDGVHNPGVQIAYGAEVEVKDGHEPYDEKAMLFMDYRTDYVSKDDLSAQEAKELEEVPTFLYAMPMGQGPEGRK-RIFFEETSLVARPPISFDLCKERLKRRLEHHGIEVTKLLDEELCYIPMGGALPKLDQRVVAFGGASGLVHASTGYMHVRMLAASFPVAHAIARELKKGGPGAPAAAARRAYQALWPAKAKLQRDFHVFGGEFLMAQHAPALRGFFNGFFKIPLPLWAGFLSGYPNLPYNERHQDWQGRFSFGVQFFFKLPPAVQLKLALAGAANGWKHGLLQAVTPLAE 489
[Close]
BLAST of NO10G02110 vs. NCBI_GenBank
Match: CBN78004.1 (Lycopene beta cyclase, chloroplast precursor [Ectocarpus siliculosus])

HSP 1 Score: 490.0 bits (1260), Expect = 1.000e-134
Identity = 245/456 (53.73%), Postives = 312/456 (68.42%), Query Frame = 0 
Query:   89 VTYDVAIIGGGPAGSVMAALLAQQHKLKVVMMDPKLDERWIPNYGVWLEEWQALEKLLGFSLESCLMKVWPNTDLFCGGSHGIPADERLRVKRPYGRVDRVALKQEFRSRALNGGAVLLSMAVDPSSVVHGEEGSQLRLSDGTRINTRLLLDCSGYQSTLVELDGVHNPGVQIAYGIECEV--DVCPYEEDAMTLMDYRTNYVSSSSAEAEVAR----EPTFMYAMPMGPSEDGQKQKVFFEETSLVARPPISFDECKRRMELRLKHLGATVLNVEEEEFCYIPMGGAIPTRSQRVVAFGGALGLVHASTGYQICRALAAAGPAAKTIAAELRKPS-YDPDVAARAVYDTVWSRTTRLQRDFFIFGGEFLMVQNAENLRGFFDSFFRLPVGMWAGFLAGWPGLPNNEFHETWGRRLIFGIQFWLLSPLSLKIALAVAGVMNG-GYPFIRCVTPFAE 537
            V YD AI+G GPAG VMA LLA++H LKV ++DP L++RWIPNYGVW+EEW+AL+K L   L  CL + W  TD F GGSHG PADER R+ RPY RV R  ++   +SR    G   +   VD  ++ H  +G+ + L DG +I+ RLL+DCSG+ S LVE  G HNPGVQIAYG E EV     PY+E+AM  MDYRT+Y   +    E  +     PTF+YAMPMG + +GQ+ ++FFEETSLVARPPISFD CK R+  RLKH G  V  V +EE CYIPMGGA+P+ +QRVVAFGGA GLVHA+TGY   R LAA+G  ++ IAAEL+K      + AAR  Y  +W    +LQRDF +FGGEFLM Q A  LRGFF+ FF+LP+ +WAGFL+G+P LP+NE H+ W  R  FG+QF+     +++  LA+AG ++G  Y  I+ VTP AE
Sbjct:   34 VVYDAAIVGYGPAGGVMATLLAEKHGLKVCIIDPNLEKRWIPNYGVWVEEWEALDKDLQIGLGDCLDRTWEVTDSFFGGSHGTPADERCRIDRPYARVSRDKMQANLKSRLSAAGVTKIKGKVDAKTLEHSADGTSVCLDDGQQIDCRLLVDCSGHYSELVERVGEHNPGVQIAYGAEVEVKDGHAPYDENAMLFMDYRTDYADKAELSPEEVKGLDDTPTFLYAMPMGAAPNGQR-RIFFEETSLVARPPISFDLCKERLYRRLKHHGIEVTKVMDEELCYIPMGGAMPSLTQRVVAFGGASGLVHAATGYMHVRMLAASGAVSRAIAAELKKDGPGTSEAAARRAYQALWPSKAKLQRDFHVFGGEFLMAQPASTLRGFFNGFFKLPLPLWAGFLSGYPNLPHNELHQDWQSRFKFGLQFFFKLAPAVQFQLALAGALSGWQYGLIKAVTPLAE 488
[Close]
BLAST of NO10G02110 vs. NCBI_GenBank
Match: ATD53296.1 (lycopene beta-cyclase [Scytosiphon lomentaria])

HSP 1 Score: 490.0 bits (1260), Expect = 1.000e-134
Identity = 246/456 (53.95%), Postives = 313/456 (68.64%), Query Frame = 0 
Query:   89 VTYDVAIIGGGPAGSVMAALLAQQHKLKVVMMDPKLDERWIPNYGVWLEEWQALEKLLGFSLESCLMKVWPNTDLFCGGSHGIPADERLRVKRPYGRVDRVALKQEFRSRALNGGAVLLSMAVDPSSVVHGEEGSQLRLSDGTRINTRLLLDCSGYQSTLVELDGVHNPGVQIAYGIECEV--DVCPYEEDAMTLMDYRTNYVSSSSAEAEVARE----PTFMYAMPMGPSEDGQKQKVFFEETSLVARPPISFDECKRRMELRLKHLGATVLNVEEEEFCYIPMGGAIPTRSQRVVAFGGALGLVHASTGYQICRALAAAGPAAKTIAAELRKPS-YDPDVAARAVYDTVWSRTTRLQRDFFIFGGEFLMVQNAENLRGFFDSFFRLPVGMWAGFLAGWPGLPNNEFHETWGRRLIFGIQFWLLSPLSLKIALAVAGVMNG-GYPFIRCVTPFAE 537
            V YD AI+G GPAG VMA LL+++H LKV ++DP L++RWIPNYGVW+EEW++L+  L   L  CL + W  TD F GGSHG PADER R+ RPY RV R  ++   ++R    G   ++  VD  ++ H  EG+ + L DG +I+ RLL+DCSG+ S LVE  G HNPGVQIAYG E EV     PY+E+AM  MDYRT+YV  S    E A+     PTF+YAMPMG + +GQ+ ++FFEETSLVARPPI FD CK R+  RL+H G  V  V +EE CYIPMGGA+P+ +QRVVAFGGA GLVHA+TGY   R LAAAGP ++ IAAEL+K      + AAR  Y  +W    +LQRDF +FGGEFLM Q A  LRGFF+ FF+LP+ +WAGFL+G+P LP+NE H+ W  R  FG QF+     +++  LA+AG ++G  Y  IR VTP AE
Sbjct:   33 VVYDAAIVGYGPAGGVMATLLSEKHGLKVCIIDPNLEKRWIPNYGVWVEEWESLDNDLQIGLGDCLDRKWEVTDSFFGGSHGTPADERCRIDRPYARVSRDKMQANLKARLSAAGVTKIAGKVDAKTMEHSAEGTSVCLEDGQQIDCRLLVDCSGHYSELVERVGDHNPGVQIAYGAEVEVKDGHAPYDENAMLFMDYRTDYVDKSKLSPEEAQGLDDIPTFLYAMPMGAAPNGQR-RIFFEETSLVARPPIDFDLCKERLYRRLEHHGIEVTKVMDEELCYIPMGGAMPSLTQRVVAFGGASGLVHAATGYMHVRMLAAAGPVSRAIAAELKKGGPGTSEAAARRAYQALWPSKAKLQRDFHVFGGEFLMAQKAPTLRGFFNGFFKLPLPLWAGFLSGYPNLPHNELHQDWQSRFKFGFQFFFKLAPAVQFQLALAGALSGWQYGLIRAVTPLAE 487
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BLAST of NO10G02110 vs. NCBI_GenBank
Match: ATD53299.1 (lycopene beta-cyclase [Undaria pinnatifida])

HSP 1 Score: 485.7 bits (1249), Expect = 2.000e-133
Identity = 250/469 (53.30%), Postives = 316/469 (67.38%), Query Frame = 0 
Query:   89 VTYDVAIIGGGPAGSVMAALLAQQHKLKVVMMDPKLDERWIPNYGVWLEEWQALEKLLGFSLESCLMKVWPNTDLFCGGSHGIPADERLRVKRPYGRVDRVALKQEFRSRALNGGAVLLSMAVDPSSVVHGEEGSQLRLSDGTRINTRLLLDCSGYQSTLVELDGVHNPGVQIAYGIECEV--DVCPYEEDAMTLMDYRTNYVSSSSAEA-----EVAREPTFMYAMPMGPSEDGQKQKVFFEETSLVARPPISFDECKRRMELRLKHLGATVLNVEEEEFCYIPMGGAIPTRSQRVVAFGGALGLVHASTGYQICRALAAAGPAAKTIAAELRKPSYD-PDVAARAVYDTVWSRTTRLQRDFFIFGGEFLMVQNAENLRGFFDSFFRLPVGMWAGFLAGWPGLPNNEFHETWGRRLIFGIQFWLLSPLSLKIALAVAGVMNG-GYPFIRCVTPFAEL----PLSFETE 545
            V YD AI+G GPAG VMA LLA++H LKV ++DP L++RWIPNYGVW+EEW+AL+K L   L  CL   W  TD F GGSHG+PADER R+ R Y RV R  ++   ++R    G   ++  VD  +V H  EG+ + L DG  IN RL++D SG+ S LVE  G HNPGVQIAYG E EV     PY+E+AM  MDYRT+YV   S  +     E+   PTF+YAMPMG + +G ++++FFEETSLVARPPISFD CK R+  R+KH G  V  V +EEFCYIPMGGA+P  +QRVVAFGGA GLVHA+TGY   R LAA+G  A+ IA+EL+K     P  AAR  Y  +W    +LQRDF +FGGEFLM Q A  LRGFF+ FF+LP  +WAGFL+G+P LP NE H+TW  R  FG+QF+L    +++  LA+AG +NG  Y  I  V+P A +     L F++E
Sbjct:   35 VVYDAAIVGYGPAGGVMATLLAEKHGLKVCIIDPNLEKRWIPNYGVWVEEWEALDKDLQIGLGDCLDLTWEVTDSFFGGSHGVPADERCRINRAYARVSRDKMQANLKARLAAAGVDKITGRVDAKTVEHSAEGTTMCLDDGKLINCRLVVDSSGHFSELVERVGEHNPGVQIAYGAEVEVKDGHAPYDENAMLFMDYRTDYVDDKSELSEKELRELDEIPTFLYAMPMGEAPNG-RRRIFFEETSLVARPPISFDLCKERLYRRMKHHGIEVTKVMDEEFCYIPMGGAMPVLTQRVVAFGGASGLVHAATGYMHVRMLAASGGVARAIASELKKEGPGAPQAAARRAYQALWPAKAKLQRDFHVFGGEFLMAQQAPVLRGFFNGFFKLPTSLWAGFLSGYPNLPYNELHQTWQGRFGFGVQFFLKLAPAVQFQLALAGALNGWQYGLISAVSPLAAVEDAKDLQFDSE 502
The following BLAST results are available for this feature:
BLAST of NO10G02110 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM25354.15.200e-21969.50lycopene beta cyclase [Nannochloropsis gaditana][more]
ATD53301.14.000e-14255.96lycopene beta-cyclase [Sargassum thunbergii][more]
ATD53304.12.000e-14155.00lycopene beta-cyclase [Sargassum hemiphyllum var. ... [more]
ATD53300.11.800e-13955.09lycopene beta-cyclase [Sargassum vachellianum][more]
ATD53297.16.500e-13754.39lycopene beta-cyclase [Punctaria latifolia][more]
ATD53295.12.500e-13653.88lycopene beta-cyclase [Petalonia fascia][more]
ATD53303.14.700e-13553.74lycopene beta-cyclase [Dictyopteris undulata][more]
CBN78004.11.000e-13453.73Lycopene beta cyclase, chloroplast precursor [Ecto... [more]
ATD53296.11.000e-13453.95lycopene beta-cyclase [Scytosiphon lomentaria][more]
ATD53299.12.000e-13353.30lycopene beta-cyclase [Undaria pinnatifida][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL052nonsL052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR004ncniR004Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR015ngnoR015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001080NSK001080Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO10G02110.1NO10G02110.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|527076gene_4002Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO10G02110.1NO10G02110.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO10G02110 ID=NO10G02110|Name=NO10G02110|organism=Nannochloropsis oceanica|type=gene|length=2922bp
ACAACATAGACAGTCAGGGACAATATGGTGTCCTCGGCCAGCTGGATGCG
CTTCCTAGGTACCCTGTGCTACTGCCTGCTTGCGTATGCTTGGGTCCCGC
AAGGTCCATTACGACAGGGGAAGCGAGCGGAGGGCTCGTCATGTAGGAGG
GCAAGGCAGCAGCAGCCTTGGAGAGCGTCCTTTGTCAGTAGTATCTTGCT
TCCCTCGTCGAGACCACCTCTACGCACTCTGTCCAAACAGCCCTTGAGCG
TTGCAATGGAGAGCGGAGCAGATTTGACGACGGAGGGTGTCACCTACGAT
GTGGCTATAATTGGTGGGGGGCCAGCTGGATCTGTTATGGCGGCCTTGCT
GGCGCAGCAGCACAAGCTCAAAGTCGTGATGATGGACCCCAAGCTCGATG
AGCGATGGATTCCCAATTACGGCGTGTGGTTAGAAGAATGGCAAGgtatg
tacgtggggaaagggaatgatggtggactgttgagggggctgcaagagga
ggagtaaaactatcaaatttgtcttctccttgggccttggtcatccgtgc
tccctccgtctcacttttccgtttactttcatacttcttagCTCTGGAGA
AGCTTTTAGGGTTTAGCCTGGAAAGTTGTCTCATGAAGGTGTGGCCCAAC
ACTGACCTGTTCTGCGGAGGCAGTCATGGTATCCCCGCTGATGAGCGACT
GCGGGTGAAGCGGCCATATGGGAGGGTCGATCGCGTGgtaagagaaagtg
agaggacattcaagaaatttgtggatgtagtttcgcatgtcgtcaagcta
tgatgtcaatgttagccctcccttcttgtcgccgtctcatagggaggcct
tctaattctcctaccactacacccaacattccaccttcaaccaaaaccct
gcagGCCCTTAAACAAGAATTCCGATCCCGCGCTTTGAACGGCGGGGCCG
TGCTACTTTCCATGGCAGTAGATCCCTCCTCAGTCGTACATGGCGAAGAA
GGGTCGCAGCTTCGACTCTCAGACGGAACTCGAATTAATACTCGGCTGTT
GCTTGACTGCTCCGGCTATCAGTCTACCTTGGTCGAGCTGGACGGCGTGC
ATAATCCGGGGGTGCAGgtatctatgactgggagggagggagaagggacg
gaagggaaggaattagaaacagacgggggaagttgggtttgttttccctg
cttgaggtgactgctgactcaaatttctaataattgcagATCGCCTATGG
TATTGAGTGCGAGGTTGATGTGTGCCCTTACGAAGAGGACGCAATGACTC
TCATGGATTATCGCACCAACTACGTAAGCAGCTCAAGCGCCGAGgtaatg
gcaaaaaaaagggggggataagggagggaaggaggaagggagttatccac
ctaccaaaaaataatctcgacaacacctccattcaaatgttcccatattt
tcccatcccctccctttgttctctcctctcttcaacaagGCGGAAGTTGC
TCGTGAGCCCACCTTCATGTACGCCATGCCCATGGGCCCGTCCGAGGACG
GCCAAAAACAAAAAGTCTTCTTCGAGGAAACCTCTCTCGTCGCCCGGCCC
CCCATCAGCTTCGACGAATGCAAACGCCGCATGGAACTCCGTTTGAAGCA
CCTGGGTGCCACGGTGCTCAATGTGGAGGAGGAGGAATTCTGCTACATTC
CCATGGGGGGAGCGATTCCCACCCGGTCTCAGAGAGTCGTGGCCTTTGGA
GGTGCCCTTGGCCTGGTGCATGCCTCGACGGGGTATCAGATATGTAGGGC
CTTGGCCGCTGCAGGGCCGGCGGCCAAGACAATTGCGGCGGAGgttggtt
gcgggggaagggagggaggaaggattttgcagagaggtgactttgacggg
tgcgaatgtggttgtctcctcatccaatgaacggaggtgggagaaagctt
ttgcgtgctttcttaactttcttctggaatctttcatacctttctcacgt
tctttttactctcatagCTGCGCAAGCCTTCCTATGACCCAGACGTGGCC
GCCCGGGCTGTCTACGACACGGTCTGGAGCCGCACCACCCGTTTGCAGgt
aagacgaagggataataaaaggcggcattcagctgctgtcaatgtcgctg
gcgcaggataggatttttgctctcttcctcatgctgatttgtcgtggagt
tcttcatgtctttcatctcttatttgcgcacgcgtatgttagtctttctc
tcaccctcctgcaacttctcctcctacccccttacttacccacaaatagC
GAGACTTCTTCATTTTTGGTGGCGAGTTTTTGATGGTTCAAAATGCCGAG
AATCTGCGGGGGTTCTTCGATTCCTTTTTCCGATTGCCTGTGGGGATGTG
GGCGgtaagcatttgagcacttggctttgctacgggggaagagatggagg
aatggttggttgtaaattagggtcagacattgccatttgtcggcccggga
ctgtgccctttctgttccctttttctgttttcaatcgtacagtagtttta
caccgcgccttttaacatcctttttctcttctcgtctcctcttctgtcaa
acagGGTTTCTTGGCCGGGTGGCCCGGCCTTCCCAACAATGAATTTCACG
AAACCTGGGGTAGACGCTTGATTTTTGGGATTCAGTTCTGGCTCTTGTCC
CCGCTCTCTCTCAAGATCGCGCTGGCAGTGGCTGGGGTTATGAATGGAGG
GTATCCATTTATTCGGTGTGTCACGCCTTTTGCTGAACTACCCTTGAGTT
TCGAGACTGAAGCGGCGGCGGAAGCAGCGGGAGCAGCAGAAGCAGCAGCA
GCAGCAGCAGCAGCAGCAGCAGCAGAGAGGTCAAGGAAAGTCGAAGGTGT
TAGTAGAGGTGAAGTGGCATGA
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protein sequence of NO10G02110.1

>NO10G02110.1-protein ID=NO10G02110.1-protein|Name=NO10G02110.1|organism=Nannochloropsis oceanica|type=polypeptide|length=581bp
MVSSASWMRFLGTLCYCLLAYAWVPQGPLRQGKRAEGSSCRRARQQQPWR
ASFVSSILLPSSRPPLRTLSKQPLSVAMESGADLTTEGVTYDVAIIGGGP
AGSVMAALLAQQHKLKVVMMDPKLDERWIPNYGVWLEEWQALEKLLGFSL
ESCLMKVWPNTDLFCGGSHGIPADERLRVKRPYGRVDRVALKQEFRSRAL
NGGAVLLSMAVDPSSVVHGEEGSQLRLSDGTRINTRLLLDCSGYQSTLVE
LDGVHNPGVQIAYGIECEVDVCPYEEDAMTLMDYRTNYVSSSSAEAEVAR
EPTFMYAMPMGPSEDGQKQKVFFEETSLVARPPISFDECKRRMELRLKHL
GATVLNVEEEEFCYIPMGGAIPTRSQRVVAFGGALGLVHASTGYQICRAL
AAAGPAAKTIAAELRKPSYDPDVAARAVYDTVWSRTTRLQRDFFIFGGEF
LMVQNAENLRGFFDSFFRLPVGMWAGFLAGWPGLPNNEFHETWGRRLIFG
IQFWLLSPLSLKIALAVAGVMNGGYPFIRCVTPFAELPLSFETEAAAEAA
GAAEAAAAAAAAAAAERSRKVEGVSRGEVA*
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Synonyms
Publications