NO10G02100, NO10G02100 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO10G02100 vs. NCBI_GenBank
Match: EWM25354.1 (lycopene beta cyclase [Nannochloropsis gaditana]) HSP 1 Score: 264.6 bits (675), Expect = 3.500e-67 Identity = 156/187 (83.42%), Postives = 164/187 (87.70%), Query Frame = 0 Query: 91 KDKYENEELIRFGLPEDVWFHVDDLSSAHVYLRQKPGEKLDDISPDLLLECASLVKANSIEGCKKKEVQVVYTRWRNLKKTKSMEAGQIGFHDQSKVRKIKVEKCNSIVNALNRTKEERFPDLQAEQEVRAAEYRAVQKSLKRGQXXXXXXXXXXXXXXXXXXSYESLMKDDRMESNKK--NVADVA 276 KDKYENEELIRFGLPEDVWFHVDDLSSAHVYLRQKPG+KLDDIS DLL EC+SLVKANSIEGCK KEV+VVYTRWRNLKKTKSMEAGQIGFHD SKVR IKV+KCNSIVNALN+TKEER+PDLQAEQE RA EYRA QK XXXXXXXXXXXXXXXXXX SLM D MESNKK + ADV+ Sbjct: 68 KDKYENEELIRFGLPEDVWFHVDDLSSAHVYLRQKPGQKLDDISSDLLHECSSLVKANSIEGCKMKEVKVVYTRWRNLKKTKSMEAGQIGFHDPSKVRTIKVQKCNSIVNALNKTKEERYPDLQAEQEARAVEYRAAQKXXXXXXXXXXXXXXXXXXXXXXXXXXXSLMNDGGMESNKKWGSTADVS 254
BLAST of NO10G02100 vs. NCBI_GenBank
Match: CBJ27536.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 210.3 bits (534), Expect = 7.800e-51 Identity = 100/148 (67.57%), Postives = 122/148 (82.43%), Query Frame = 0 Query: 82 TEGYVLYMGKDKYENEELIRFGLPEDVWFHVDDLSSAHVYLRQKPGEKLDDISPDLLLECASLVKANSIEGCKKKEVQVVYTRWRNLKKTKSMEAGQIGFHDQSKVRKIKVEKCNSIVNALNRTKEERFPDLQAEQEVRAAEYRAVQK 230 ++G++LYMGKDKYENE+LIR+G PEDVWFHVD+LSSAHVYLR GEKL ++ P LL+EC +LVKANSIEGCK+KEV VVYTRW+NL+K S EAGQ+G+ D+S+V K +VEK N+IVNALNRTK E P+L QE RA E+R QK Sbjct: 8 SDGHMLYMGKDKYENEDLIRYGFPEDVWFHVDNLSSAHVYLRMNRGEKLKELDPALLVECCTLVKANSIEGCKRKEVNVVYTRWQNLEKKASYEAGQVGYKDESRVFKCRVEKTNAIVNALNRTKREEHPNLAELQEERAKEHRREQK 155
BLAST of NO10G02100 vs. NCBI_GenBank
Match: XP_021972462.1 (coiled-coil domain-containing protein 25 [Helianthus annuus] >OTG19998.1 hypothetical protein HannXRQ_Chr07g0188141 [Helianthus annuus]) HSP 1 Score: 201.1 bits (510), Expect = 4.700e-48 Identity = 117/202 (57.92%), Postives = 148/202 (73.27%), Query Frame = 0 Query: 85 YVLYMGKDKYENEELIRFGLPEDVWFHVDDLSSAHVYLRQKPGEKLDDISPDLLLECASLVKANSIEGCKKKEVQVVYTRWRNLKKTKSMEAGQIGFHDQSKVRKIKVEK-CNSIVNALNRTKEERFPDLQAEQEVRAAEYRAVQKSLKRGQXXXXXXXXXXXXXXXXXXSYESLMKDDRMESNKKNVA---DVAELEEDFM 283 Y ++MG DK+ENEELI++G PED+WFHVD +SSAHVY+R + G+ +DDIS LL +CA LVKANSI+G K + VVYT W+NLKKT SM+ GQ+GFH+ VR ++VEK N +VN LNRTK ER PDL+AE+E A RA +K L R + XXXXXXXXXXXX SY++LM D+M SNK+ + + ELEEDFM Sbjct: 14 YTIFMGLDKFENEELIKYGFPEDIWFHVDKMSSAHVYVRLRKGQTIDDISEGLLEDCAQLVKANSIQGNKVNNIDVVYTPWQNLKKTPSMDVGQVGFHNNKSVRTVRVEKRINEVVNRLNRTKVERKPDLKAEREAVNAAERAERKQLLRDKKRXXXXXXXXXXXXAEVRSYKNLMVADKMTSNKEIASTQKSLQELEEDFM 215
BLAST of NO10G02100 vs. NCBI_GenBank
Match: XP_002516569.1 (PREDICTED: coiled-coil domain-containing protein 25 [Ricinus communis] >EEF45910.1 Coiled-coil domain-containing protein, putative [Ricinus communis]) HSP 1 Score: 199.9 bits (507), Expect = 1.100e-47 Identity = 107/202 (52.97%), Postives = 133/202 (65.84%), Query Frame = 0 Query: 85 YVLYMGKDKYENEELIRFGLPEDVWFHVDDLSSAHVYLRQKPGEKLDDISPDLLLECASLVKANSIEGCKKKEVQVVYTRWRNLKKTKSMEAGQIGFHDQSKVRKIKVEK-CNSIVNALNRTKEERFPDLQAEQEVRAAEYRAVQKSLKRGQXXXXXXXXXXXXXXXXXXSYESLMKDDRMESNKKNVAD---VAELEEDFM 283 Y ++MG DKYENEELIR+G PED+WFHVD +SSAHVYLR G+ +DDIS LL +CA LVKANSI+G K + VVYT W NLKKT SM+ GQ+GFH+ VR ++VEK N IVN LNRTK ER PDL+AE+E A RA +K R + SY+ LM ++M SNK+ ++ + ELEEDFM Sbjct: 14 YTIFMGLDKYENEELIRYGFPEDIWFHVDKMSSAHVYLRLNKGQTIDDISEGLLEDCAQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNSKMVRTVRVEKRINEIVNRLNRTKVERKPDLKAEREAVNAAERAERKLQLRDKKRREEMERLEKERQAEIRSYKGLMVSEKMTSNKQIASENKSLQELEEDFM 215
BLAST of NO10G02100 vs. NCBI_GenBank
Match: XP_021597713.1 (coiled-coil domain-containing protein 25 [Manihot esculenta] >OAY26673.1 hypothetical protein MANES_16G065900 [Manihot esculenta]) HSP 1 Score: 199.1 bits (505), Expect = 1.800e-47 Identity = 107/202 (52.97%), Postives = 133/202 (65.84%), Query Frame = 0 Query: 85 YVLYMGKDKYENEELIRFGLPEDVWFHVDDLSSAHVYLRQKPGEKLDDISPDLLLECASLVKANSIEGCKKKEVQVVYTRWRNLKKTKSMEAGQIGFHDQSKVRKIKVEK-CNSIVNALNRTKEERFPDLQAEQEVRAAEYRAVQKSLKRGQXXXXXXXXXXXXXXXXXXSYESLMKDDRMESNKKNVAD---VAELEEDFM 283 Y ++MG DKYENEELI++G PED+WFHVD +SSAHVYLR G+ +DDIS LL +CA LVKANSI+G K + VVYT W NLKKT SM+ GQ+GFH+ VR ++VEK N IVN LNRTK ER PDL+AE+E A RA +K R + SY+ LM ++M SNK+ A+ + ELEEDFM Sbjct: 14 YTIFMGLDKYENEELIKYGFPEDIWFHVDKMSSAHVYLRLHKGQTIDDISEGLLEDCAQLVKANSIQGNKVNNIDVVYTPWSNLKKTASMDVGQVGFHNPKMVRTVRVEKRINEIVNRLNRTKVERRPDLKAEKEAIHAAERAERKLQLRDKKRREEVERLEKERQAEIRSYKGLMVSEKMTSNKQIAAENKSLQELEEDFM 215
BLAST of NO10G02100 vs. NCBI_GenBank
Match: XP_021674562.1 (coiled-coil domain-containing protein 25-like [Hevea brasiliensis]) HSP 1 Score: 199.1 bits (505), Expect = 1.800e-47 Identity = 107/202 (52.97%), Postives = 133/202 (65.84%), Query Frame = 0 Query: 85 YVLYMGKDKYENEELIRFGLPEDVWFHVDDLSSAHVYLRQKPGEKLDDISPDLLLECASLVKANSIEGCKKKEVQVVYTRWRNLKKTKSMEAGQIGFHDQSKVRKIKVEK-CNSIVNALNRTKEERFPDLQAEQEVRAAEYRAVQKSLKRGQXXXXXXXXXXXXXXXXXXSYESLMKDDRMESNKKNVAD---VAELEEDFM 283 Y ++MG DKYENEELI++G PED+WFHVD +SSAHVYLR G+ +DDIS LL +CA LVKANSI+G K + VVYT W NLKKT SM+ GQ+GFH+ VR ++VEK N IVN LNRTK ER PDL+AE+E A RA +K R + SY+ LM ++M SNK+ A+ + ELEEDFM Sbjct: 14 YTIFMGLDKYENEELIKYGFPEDIWFHVDKMSSAHVYLRLHKGQTIDDISEGLLEDCAQLVKANSIQGNKVNNIDVVYTPWSNLKKTASMDVGQVGFHNPKMVRTVRVEKRINEIVNRLNRTKVERRPDLKAEREAVNAAERAERKLQLRDKKRREEMERLEKERQAEIRSYKGLMVSEKMTSNKQIAAENKSLQELEEDFM 215
BLAST of NO10G02100 vs. NCBI_GenBank
Match: XP_012077446.1 (coiled-coil domain-containing protein 25 [Jatropha curcas] >KDP34211.1 hypothetical protein JCGZ_07782 [Jatropha curcas]) HSP 1 Score: 197.6 bits (501), Expect = 5.200e-47 Identity = 106/202 (52.48%), Postives = 134/202 (66.34%), Query Frame = 0 Query: 85 YVLYMGKDKYENEELIRFGLPEDVWFHVDDLSSAHVYLRQKPGEKLDDISPDLLLECASLVKANSIEGCKKKEVQVVYTRWRNLKKTKSMEAGQIGFHDQSKVRKIKVEK-CNSIVNALNRTKEERFPDLQAEQEVRAAEYRAVQKSLKRGQXXXXXXXXXXXXXXXXXXSYESLMKDDRMESNKKNVAD---VAELEEDFM 283 Y ++MG DKYENEELI++G PED+WFHVD +SSAHVYLR G+ +DDIS LL +CA LVKANSI+G K + VVYT W NLKKT SM+ GQ+GFH+ VR ++VEK N IVN LNRTK ER PDL+AE+E +A RA +K R + SY+ LM ++M SNK+ ++ + ELEEDFM Sbjct: 14 YTIFMGLDKYENEELIKYGFPEDIWFHVDKMSSAHVYLRLHKGQTIDDISEGLLEDCAQLVKANSIQGNKVNNIDVVYTPWSNLKKTASMDVGQVGFHNPKMVRIVRVEKRINEIVNRLNRTKVERKPDLKAEKEAVSAAERAERKLQLRVKKRREEIERLEKEKQAEIRSYKGLMVSEKMTSNKQIASENKSLQELEEDFM 215
BLAST of NO10G02100 vs. NCBI_GenBank
Match: XP_021662296.1 (coiled-coil domain-containing protein 25-like [Hevea brasiliensis]) HSP 1 Score: 197.6 bits (501), Expect = 5.200e-47 Identity = 106/202 (52.48%), Postives = 132/202 (65.35%), Query Frame = 0 Query: 85 YVLYMGKDKYENEELIRFGLPEDVWFHVDDLSSAHVYLRQKPGEKLDDISPDLLLECASLVKANSIEGCKKKEVQVVYTRWRNLKKTKSMEAGQIGFHDQSKVRKIKVEK-CNSIVNALNRTKEERFPDLQAEQEVRAAEYRAVQKSLKRGQXXXXXXXXXXXXXXXXXXSYESLMKDDRMESNKKNVAD---VAELEEDFM 283 Y ++MG DKYENEELI++G PED+WFHVD +SSAHVYLR G+ +DDIS LL +CA LVKANSI+G K + VVYT W NLKKT SM+ GQ+GFH+ VR +KVEK N +VN LNRTK ER PDL+AE+E + RA +K R + SY+ LM + M SNK+ A+ + ELEEDFM Sbjct: 14 YTIFMGLDKYENEELIKYGFPEDIWFHVDKMSSAHVYLRLHKGQTIDDISEGLLEDCAQLVKANSIQGNKVNNIDVVYTPWSNLKKTASMDVGQVGFHNPKMVRTVKVEKRINELVNRLNRTKVERKPDLKAEREAVNSAERAERKLQLRDKKRREEIERLEKERQAEIRSYKGLMVSENMTSNKQIAAENKSLQELEEDFM 215
BLAST of NO10G02100 vs. NCBI_GenBank
Match: EJK77213.1 (hypothetical protein THAOC_00969 [Thalassiosira oceanica]) HSP 1 Score: 197.2 bits (500), Expect = 6.800e-47 Identity = 118/203 (58.13%), Postives = 146/203 (71.92%), Query Frame = 0 Query: 85 YVLYMGKDKYENEELIRFGLPEDVWFHVDDLSSAHVYLRQKPGEKLDDISPDLLLECASLVKANSIEGCKKKEVQVVYTRWRNLKKTKSMEAGQIGFHDQSKVRKIKVEKCNSIVNALNRTKEERFPDLQAEQEVRAAEYRAVQKSLKRGQXXXXXXXXXXXXXXXXXXSYESLMKDDRMESNKKNVADV-----AELEEDFM 283 Y +YMGKDK+ENE LI++GLPEDVWFHVDDLSSAHVYLR KPG+ LDDI + L++C SL KANSI+GCKK V +VYTRW+NLKKT M GQ+G+H + VR+ + EK N +V L +TK+E FPDL EQ R E + ++K+ R +XXXXXXXXXXXXXXXXXX E + D+M SN A V + E+DFM Sbjct: 12 YTIYMGKDKHENETLIKYGLPEDVWFHVDDLSSAHVYLRLKPGQTLDDIPEEALIDCCSLCKANSIQGCKKSTVYIVYTRWKNLKKTSGMVDGQVGYHRPNNVRRRQTEKNNPVVRQLEKTKKELFPDLAQEQAARMREIQELKKAHMRAEXXXXXXXXXXXXXXXXXXXXERIFSQDKMTSNADMNATVDDSAAVDYEDDFM 214
BLAST of NO10G02100 vs. NCBI_GenBank
Match: XP_005698878.2 (PREDICTED: coiled-coil domain-containing protein 25-like [Capra hircus]) HSP 1 Score: 196.8 bits (499), Expect = 8.900e-47 Identity = 102/198 (51.52%), Postives = 128/198 (64.65%), Query Frame = 0 Query: 72 ILVFVHSVHHTEGYVLYMGKDKYENEELIRFGLPEDVWFHVDDLSSAHVYLRQKPGEKLDDISPDLLLECASLVKANSIEGCKKKEVQVVYTRWRNLKKTKSMEAGQIGFHDQSKVRKIKV-EKCNSIVNALNRTKEERFPDLQAEQEVRAAEYRAVQKSLKRGQXXXXXXXXXXXXXXXXXXSYESLMKDDRMESNK 269 + F S ++ Y +YMGKDKYENE+LI++G PED+WFHVD LSSAHVYLR GEK++DI ++L++CA LVKANSI+GCK V VVYT W NLKKT M+ GQIGFH Q VR + V EK N I+N L +TK ERFPDL+AE+ R E R +K+ +G SY SL K + M SN+ Sbjct: 2 VFYFTSSSVNSSAYTIYMGKDKYENEDLIKYGWPEDIWFHVDKLSSAHVYLRLHKGEKIEDIPKEVLMDCAHLVKANSIQGCKVNNVNVVYTPWSNLKKTADMDVGQIGFHGQKDVRIVTVEEKVNEILNRLEKTKMERFPDLEAEKACRDHEERNEKKAQIQGMKRREKEAMKKKWEMDELRSYSSLTKGETMSSNQ 199 The following BLAST results are available for this feature:
BLAST of NO10G02100 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO10G02100 ID=NO10G02100|Name=NO10G02100|organism=Nannochloropsis oceanica|type=gene|length=1646bpback to top protein sequence of NO10G02100.1 >NO10G02100.1-protein ID=NO10G02100.1-protein|Name=NO10G02100.1|organism=Nannochloropsis oceanica|type=polypeptide|length=241bpback to top protein sequence of NO10G02100.2 >NO10G02100.2-protein ID=NO10G02100.2-protein|Name=NO10G02100.2|organism=Nannochloropsis oceanica|type=polypeptide|length=283bpback to top protein sequence of NO10G02100.3 >NO10G02100.3-protein ID=NO10G02100.3-protein|Name=NO10G02100.3|organism=Nannochloropsis oceanica|type=polypeptide|length=215bpback to top Synonyms
Publications
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