NO10G01980, NO10G01980 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO10G01980 vs. NCBI_GenBank
Match: EWM25416.1 (Prolyl 4-hydroxylase, alpha subunit [Nannochloropsis gaditana]) HSP 1 Score: 688.0 bits (1774), Expect = 2.500e-194 Identity = 313/444 (70.50%), Postives = 361/444 (81.31%), Query Frame = 0 Query: 105 SRCHRSEAARSYGTLPFQFNRLFFSPNAGDCRFGNRNLKLVHRDPHVYEIADFLSETEYGHLEQVIEQHLGKFSNSYTDEDVDAQVVSGSRTSAFISLRKGGGSKMRSIESRASEIVGLAPENVEPLQLVGYRHMDRFDIHHDMGTYNKETGKVEAVSPRRLITFFVYLNTLPRGQGHTVFPKLEGGRFSVQPKRLKALLWCNVLPNGAPDPRLIHRADPVREEGHLKFGINIWITDKNLGALTLSTTHGVILDHNKVIPGKRTILAMIDPPCHVCKSRDRQQFLKACDNCDISYHRYCLLPEARPPPHNGPRRFWACPLCPGKRPRPGDFCEVCDGGDREHLIVLCDTCERGFHTTCLGMRKVPKESYYCDLCQAKREAKTRADKARRDGACQACGGVEEPHRILLCDGCDGEWHLACVGLKRVPRKDWYCRECAKEMKRRKK 549 +R RSEAARSY LPFQ RLFFS NAGD R NR LKL+HR+PHVY I DFLS TE+ +L +I+Q GKF SYTD VD QV + SRTS+FISLRKGG SK+R++E+RA+EIVGL PEN EPLQ+VGYRH D FD+HHDMGTYNK+TG VEAVSPRRL+TFFVYLN+LPRGQGHTVFPKL GGRFS++PKRL+ALLWCNVL +G+PDPRLIHR DP+R+EG +KF INIWITDKNL AL S + GV+LD +KVI GKRTILA IDPPC +C+S +Q K CD+CD+SYHR CL PE RP NGPRRFW CP CPGKRPRPGDFCEVC GGDREHLIVLCD+CERGFHTTCLG+RKVPKE+Y+CD C+AK + K R ++R +GAC CG ++ PH ILLCDGCDG WHL CVGL RVPR W+CR C K RR+K Sbjct: 69 TRGRRSEAARSYSILPFQIKRLFFSRNAGDIRLNNRLLKLLHRNPHVYAIDDFLSGTEFENLGHLIDQQFGKFRASYTDCTVDEQVRNASRTSSFISLRKGGDSKVRAVENRAAEIVGLPPENTEPLQIVGYRHNDFFDVHHDMGTYNKDTGAVEAVSPRRLVTFFVYLNSLPRGQGHTVFPKLNGGRFSIKPKRLRALLWCNVLEDGSPDPRLIHRGDPIRKEGFMKFAINIWITDKNLQALAFSNS-GVVLDPSKVISGKRTILASIDPPCCICRSHKQQNLFKTCDHCDLSYHRLCLSPEERPSAPNGPRRFWTCPRCPGKRPRPGDFCEVCGGGDREHLIVLCDSCERGFHTTCLGVRKVPKEAYFCDSCRAKEKVKARTIRSREEGACHMCGSIDRPHHILLCDGCDGGWHLQCVGLARVPRGSWFCRLCTKTASRRRK 511
BLAST of NO10G01980 vs. NCBI_GenBank
Match: CEL97705.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 162.9 bits (411), Expect = 2.800e-36 Identity = 102/261 (39.08%), Postives = 138/261 (52.87%), Query Frame = 0 Query: 122 QFNRLFFS--PNAGDCRFGNRNLKLVHRDPHVYEIADFLSETEYGHLEQVIEQHLGKFSNSYT-DEDVDAQVVSGSRTSAFISLRKGGGSKMRSIESRASEIVGLAPENVEPLQLVGYRHMDRFDIHHDMGTYNKETGKVE-------------------------------AVSPRRLITFFVYLNTLP-RGQGHTVFPKLEGGRFSVQPKRLKALLWCNVLPNGAPDPRLIHRADPVREEGHLKFGINIWITDKNLGAL 348 QF RLF++ P A + R R L+LVHR P++Y +FL+E+E ++ Q QH +F S+T D + + V RTS + L K G + +R+IE RA++ VGL ENVEPLQL+ Y FDIHHD G + V A PRR++T FVYL +LP G T FP L RF P+R +AL W N+ P+G DPR++H+A P +GH K G+N+WITD AL Sbjct: 25 QFKRLFYTSKPQAVE-RICGRTLELVHRTPNIYACDEFLTESELSYIAQYYSQHHDEFQRSFTQDLENEELVYDECRTSTYTHLPKCGSTVIRNIERRAADCVGLPHENVEPLQLLSYAPGQYFDIHHDAGRLEGDVDAVGLKLPGAASGGRSREDFQDSPPDIRVVMPDAFAEEPRRILTAFVYLTSLPDSAGGETDFP-LINQRF--HPRRGRALFWSNLFPDGTADPRVVHQARPTL-DGHRKMGMNVWITDTPQTAL 280
BLAST of NO10G01980 vs. NCBI_GenBank
Match: GBG29210.1 (Prolyl 4-hydroxylase subunit alpha-1 [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 149.8 bits (377), Expect = 2.500e-32 Identity = 93/217 (42.86%), Postives = 129/217 (59.45%), Query Frame = 0 Query: 142 LKLVHRDPHVYEIADFLSETEYGHLEQVIEQHLGKFS-----NSYTDEDVDAQVVSGSRTSAFISLRKGGGSKMRSIESRASEIVGLAPENVEPLQLVGYRHMDRFDIHHDMGTYNKETGKV--EAVSPRRLITFFVYLNTLPRGQGH-TVFPKLEGGRFSVQPKRLKALLWCNVLPNGAPDPRLIHRADPVREEGHLKFGINIWITDKNLGALTLS 351 ++ V +P +Y I +FL+E+E HL+QV GK S SY + +V S RTS F+SLRK G K+R+IESRA+E VGL +NVEPLQ+V Y++ F +HHD ++ E P RL+TFFVYLN+L QG T FP+L V+P+R A+L+CN+ G DPR+ H A+P + G KFG+N+WI+ + A T S Sbjct: 1 MERVCEEPPIYVIHNFLTESELVHLDQV---RSGKESASFGRKSYMMDKGGGRVFSEHRTSTFLSLRKMGDGKIRAIESRAAEYVGLPVDNVEPLQIVRYKNGQHFGLHHDCSEVLQDGSLALPEPGDPVRLVTFFVYLNSLEDDQGGCTSFPEL---GLRVRPERGAAVLFCNIDAKGNLDPRVKHEAEPT-QPGISKFGMNLWISSVSQLAYTQS 210
BLAST of NO10G01980 vs. NCBI_GenBank
Match: GAX19636.1 (hypothetical protein FisN_19Hh216 [Fistulifera solaris]) HSP 1 Score: 140.2 bits (352), Expect = 1.900e-29 Identity = 88/259 (33.98%), Postives = 132/259 (50.97%), Query Frame = 0 Query: 92 PEHHQGLPNPASLSRCHRSEAARSYGTLPFQFNRLFFS--PNAGDCRFGNRNLKLVHRDPHVYEIADFLSETEYGHLEQVIEQHLGKFSNSYTD-EDVDAQVVSGSRTSAFISLRKGGGSKMRSIESRASEIVGLAPENVEPLQLVGYRHMDRFDIHHDMGTYNKETGKVE-----AVSPRRLITFFVYLNTLPRGQGHTVFPKLEGGRFSVQPKRLKALLWCNVLPNGAPDPRLIHRADPVREEGHLKFGINIWITDK 343 P + Q + P S C+R + N LFFS P+ + + + VH +P++Y + +FL+ E HL + +F S+ D E+ + + RTS F+S K + +IE RA++++G+ P +E LQLV Y F IHHD+G Y++E VE SPRRL+T F YLN G G T FPK + VQP A+L+ NVL +G PD R +H +P +K+G+NIW ++ Sbjct: 54 PRNTQCIRFPPKTSLCYR------------RLNELFFSATPDTALSSY-KKPWRKVHAEPNIYVLENFLTTKEISHLMDFVATK--RFQRSFVDGENNTSSIDRWHRTSTFLSFAKQHDKTIATIEQRAADLLGIQPRALEALQLVRYEQGQFFGIHHDLGIYDEEEDTVELPPKTTWSPRRLVTLFCYLNDCSEG-GATYFPK---AQLRVQPVAGSAVLFSNVLSDGMPDVRTLHAGEPPTSTQCVKYGLNIWFCEE 293
BLAST of NO10G01980 vs. NCBI_GenBank
Match: XP_002184687.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC43746.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 125.9 bits (315), Expect = 3.800e-25 Identity = 84/207 (40.58%), Postives = 115/207 (55.56%), Query Frame = 0 Query: 145 VHRDPHVYEIADFLSETEYGHLEQVIEQHLGKFSNSYTD---EDVDAQVVSGSRTSAFISLRKGGGSKMRSIESRASEIVGL-APENVEPLQLVGYRHMDRFDIHHDMGTYNKETGKV-----EAVSPRRLITFFVYLNTLPRGQGHTVFPKLEGGRFSVQPKRLKALLWCNVLPNGAPDPRLIHRADPVREEGHLKFGINIWITDK 343 VH P++Y I DFL+ TE +L I GKF SY D ++ V RTS F+S K SK+ SIE++A+ I+G + VEPLQLV Y F HHDMG ++ G V S RRL+T F YLN + +G G T F E V PK +A+++ NVLP+G PD R +H +PV + +K+G+NIWI ++ Sbjct: 2 VHSSPNIYIIEDFLTPTELDYLRSKI--CAGKFQRSYVDAIESGGNSIVDKEHRTSTFLSFGKQQDSKVASIEAKAATILGCWSSRIVEPLQLVRYLPGQFFGEHHDMGDLQQD-GTVALPPKSLFSKRRLVTLFCYLNKVEKG-GATGFRYCE---LKVPPKPGRAVMFSNVLPDGMPDSRTVHSGEPVLD--GVKYGLNIWICEE 199
BLAST of NO10G01980 vs. NCBI_GenBank
Match: OEU13405.1 (hypothetical protein FRACYDRAFT_189308 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 115.2 bits (287), Expect = 6.700e-22 Identity = 71/204 (34.80%), Postives = 109/204 (53.43%), Query Frame = 0 Query: 151 VYEIADFLSETEYGHLEQVI-----EQHLGKFSNSYTDEDVDAQVVSGSRTSAFISLRKGGGSKMRSIESRASEIVGLAPENVEPLQLVGYRHMDRFDIHHDMGT-YNKETGKV---EAVSPRRLITFFVYLNTLPRGQGH-TVFPKL-EGGRFSVQPKRLKALLWCNVLPNGAPDPRLIHRADPV-REEGHLKFGINIWITDK 343 +Y I +FL+E E + ++ I E+ + Y V RTS F S +K SK+ ++E R + ++G +E LQLV Y+ + F IHHD+G + +T ++ + S RRL+T F YLNTL +G T FP + V+PKR +A+LW N+ G PDP+ IH + V E G K+G+NIW+ ++ Sbjct: 78 IYVIDNFLTEAELVYFDRKIATIPFERSFVDNAECYDKRQPATLVDDSHRTSTFYSFKKSHDSKISALERRIATMLGCWVHQIEALQLVRYQPGEFFGIHHDLGNLLDDDTVQLPPKDHGSKRRLVTLFCYLNTLQDDEGGCTYFPNVGSDSHLRVKPKRGRAVLWSNIGIGGKPDPKTIHAGETVISEAGTKKYGLNIWVCEE 281
BLAST of NO10G01980 vs. NCBI_GenBank
Match: XP_004990501.1 (hypothetical protein PTSG_12777 [Salpingoeca rosetta] >EGD77613.1 hypothetical protein PTSG_12777 [Salpingoeca rosetta]) HSP 1 Score: 110.5 bits (275), Expect = 1.700e-20 Identity = 103/410 (25.12%), Postives = 142/410 (34.63%), Query Frame = 0 Query: 106 RCHRSEAARSYGTLPFQFNRLFFSPNAGDCRFGNRNLKLVHRDPHVYEIADFLSETEYGHLEQVIEQHLGKFSNSYTDEDVDAQVVSGSRTSAFISLRKGGGSKMRSIESRASEIVGLAPENVEPLQLVGYRHMDRFDIHHDMGTY---NKE--------------------------------------------------------------------------------------------------------------------------------------------------------------------------TG-KVEAVSPRRLITFFVYLNTLPRGQGHTVFPKLEGGRFSVQPKRLKALLWCNVLPNGAPDPRLIHRADPVREEGHLKFGINIWITD 342 R + A+ YGT P Q R CR R L +H +P+++ + DFL+ E HL ++ + S+T+ ++ +QV+S RTS F+ L KG +R IE RA+E+ GL +EP Q+V Y+H +F +HHD GT N++ TG +VE PRRL TFFVYLN+LP GQGHT FP LEG SVQP+ A+L+ NV G D R +HRA PV + H K G+N+W+TD Sbjct: 32 RLPHTAASLFYGTQPDQIVR---------CR---RKLHRIHAEPNIFFVEDFLTRHEVEHLSSFVKGM--RLQRSFTESELGSQVISQERTSTFMWLSKGEDEIIRRIERRAAEMTGLTQSCIEPFQIVSYKHGQQFKLHHDAGTLLMGNEQDDDLCVDDDCRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRLRSSSVWPSIAAHQARESPSAASHTNTSPSSTSLLSSPLRRAADGNRNHSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLVPTGARVEVQPPRRLATFFVYLNSLPHGQGHTEFPWLEGTP-SVQPRSGCAVLFPNVERGGHVDIRTVHRAMPVTGD-HRKLGLNVWLTD 425
BLAST of NO10G01980 vs. NCBI_GenBank
Match: XP_001742698.1 (hypothetical protein, partial [Monosiga brevicollis MX1] >EDQ92936.1 predicted protein, partial [Monosiga brevicollis MX1]) HSP 1 Score: 109.8 bits (273), Expect = 2.800e-20 Identity = 60/146 (41.10%), Postives = 85/146 (58.22%), Query Frame = 0 Query: 183 DEDVDAQVVSGSRTSAFISLRKGGGSKMRSIESRASEIVGLAPENVEPLQLVGYRHMDRFDIHHDMGTYNKETGKVEAVSPRRLITFFVYLNTLPRGQ---GHTVFPKLEGGRFSVQPKRLKALLWCNVLPNGAPDPRLIHRADPV 326 D D+ V S RTS F L K S + IE RA++++G +EPLQ+V Y+ +F +HHD GT + G VE V+P R T FVYLNT+P + G+T FP+L VQPKR +A+++ N+ +G +P IH A P+ Sbjct: 1 DNDLGQPVTSAYRTSKFTWLEKSADSLVAQIERRAADLLGTEALCIEPLQVVSYQQGQQFKLHHDAGTLLERDGGVELVTPLRTATIFVYLNTIPATRSCAGYTHFPRL---GLKVQPKRGRAVVFPNLRADGTVEPATIHAALPM 143
BLAST of NO10G01980 vs. NCBI_GenBank
Match: ETO03661.1 (hypothetical protein RFI_33741 [Reticulomyxa filosa]) HSP 1 Score: 95.9 bits (237), Expect = 4.200e-16 Identity = 95/376 (25.27%), Postives = 125/376 (33.24%), Query Frame = 0 Query: 136 RFGNRNLKLVHRDPHVYEIADFLSETEYGHLEQVIEQHLGKFSNSYTDE------DVDAQVVSGSRTSAFISLRKGGGSKMRSIESRASEIVGLAPENVEPLQLVGYRHMDRFDIHHDMGTY-----------------------------------------------------------------------------------------------------------------------------------------NKETGK----------------------VEAVSPRRLITFFVYLNTLPRGQGHTVFPKLEGGRFSVQPKRLKALLWCNVLPN--GAPDPRLIHRADPVR-EEGHLKFGINIWITDKN 344 R +R L+ VH +P+VY I +FL+E E HL+ ++ F S+T E D+ + S RTS FI + S R I R S++ G ENVEP QLV Y+ F +HHD GT NK+ K V+ V PRRL + FVYLN + G G T FP L R SV+P+ KA+ WCNV PN A D RL+H+A+ V + +K G+NIWITD N Sbjct: 152 RVRSRILECVHVNPNVYVIENFLTEKETLHLQSIVRARKHDFKKSFTQEKQNDKVDLCLFIYSEERTSTFIYVSNLQDSITRRITQRVSDLTGFPIENVEPFQLVKYKRGQCFSLHHDAGTLIPMAHPLPSXXXXXXXXXPLWRCSNACSIMEDLHFADEHGEKFVCISDDDMTDDKCDHGKQEDNNASTRSDKAKIDLIQTCPTVPKPIFIDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXAHDNNIDCMMKERSTNGNKKNDKSDDDVAGTVSKATDDPHTTSYHVKIVKPRRLFSIFVYLNDVAAG-GETEFPLL---RLSVKPQTAKAVFWCNVFPNNVNAGDFRLMHQANAVAGDHAAVKIGMNIWITDSN 523
BLAST of NO10G01980 vs. NCBI_GenBank
Match: GAX13429.1 (hypoxia-inducible factor prolyl 4-hydroxylase [Fistulifera solaris]) HSP 1 Score: 92.0 bits (227), Expect = 6.100e-15 Identity = 67/203 (33.00%), Postives = 101/203 (49.75%), Query Frame = 0 Query: 139 NRNLKLVHRDPHVYEIADFLSETEYGHLEQVIEQHLGKFSNSYT-DEDVDAQVVSGSRTSAFISLRKGGGSKMRSIESRASEIVGL--APENVEPLQLVGYRHMDRFDIHHDMGTYNKETGKVEAVSPRRLITFFVYLNTLPRGQGHTVFPKLEGGRFSVQPKRLKALLWCNVLPNGAPDPRLIHRADPVREEGHLKFGINIW 339 N L ++ P V+EI DFLS TE HL Q +Q K + S DE+ D G+R+S + + + + +I RA ++ L P+ EPLQ+V YR + + +H D G + A P R T +YLN++ G G T FP G V+P+ KA+L+ P+G D + +H A PV + K+ N+W Sbjct: 197 NLTLTVLSCAPRVFEIRDFLSSTEVEHLWQFAQQK--KLTQSQIGDENTDDYASKGTRSSYNSWIGRHESALVETIYRRAYNVLQLPHTPDVTEPLQVVRYRFREAYRVHADFGYPDPS----HAEQPTRFATLLLYLNSVTMG-GETSFPLGSHGDLRVRPEAGKAVLFYLQTPDGNMDEKSLHEALPVIKGE--KWLANLW 390 The following BLAST results are available for this feature:
BLAST of NO10G01980 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO10G01980 ID=NO10G01980|Name=NO10G01980|organism=Nannochloropsis oceanica|type=gene|length=2059bpback to top protein sequence of NO10G01980.1 >NO10G01980.1-protein ID=NO10G01980.1-protein|Name=NO10G01980.1|organism=Nannochloropsis oceanica|type=polypeptide|length=558bpback to top Synonyms
Publications
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