NO10G01960, NO10G01960 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO10G01960 vs. NCBI_GenBank
Match: EWM25404.1 (hypothetical protein Naga_100005g60 [Nannochloropsis gaditana]) HSP 1 Score: 546.2 bits (1406), Expect = 8.900e-152 Identity = 312/418 (74.64%), Postives = 342/418 (81.82%), Query Frame = 0 Query: 4 TALAAVKPEDLVIAPGGTNDDFTNEQELDYLEWLVRKYKRKGRLDEARELEADVRARQEYDVRAVTRLNDVFYQAFTEQDPKVMAELWLREPEVSCIHPGVAEVVVGYDRVMRVWKDILAPKRSWIKITPEDCRVVVRGNTAFAYCFERVVPDAAGSNLEQRLFATNVFVRRQGMWYIGHHHATLLKAPASDKPAQNQXXXXAALMQQLQQSLGLNGNKIINLGXXXXXXXXXXXXXXXXXXXXXXXAAQLGALERQLGAGESRKPRVRMLKDGKYQILSEXXXXXXXXXXXXGVQRDKALTRKTVRAIQQLFNDGRITIEQKRRLLNEIIQHSNHEVPSMVEIAYELLLRNDEEVVAPQSGGKSLPAGQKTGASTTNIAAPADGDASAAATSREEDILNEFLEQCRIIAQAGEEDDE 422 T++ AVKPEDLVI+PGG+NDDF+NEQELDYLEWLVRK+KRKGR++EAREL+ADVR RQEYDVRAVTRLN+VFYQAFT+QDPKVMAELWLREPEVSCIHPGVAEVVVGYDRVMRVWKDILAPKR+WI+ITPE+ +VVVRGNTAFAYCFERVVPDAAGSNLEQRLFATNVFVRRQGMW+I XXXX QSLGLNGNKIINLG XXXXX AAQLGALERQLGAGE RKPRVRMLKDGKYQILS+XXXXXXXXXXXX V RDKALTR+TVRAIQQLFN+GRI+IEQKRRLLNEIIQHSNHEVPSMVEIAYELLLR+D+ +P K+LPAGQK+ A+ + S A SR +DILNEFLEQCRIIA AGE+D+E Sbjct: 46 TSVCAVKPEDLVISPGGSNDDFSNEQELDYLEWLVRKFKRKGRMEEARELQADVRVRQEYDVRAVTRLNEVFYQAFTKQDPKVMAELWLREPEVSCIHPGVAEVVVGYDRVMRVWKDILAPKRAWIRITPENSQVVVRGNTAFAYCFERVVPDAAGSNLEQRLFATNVFVRRQGMWFIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSLGLNGNKIINLG-GLKGQNGAGNGXXXXXGSLDDLAAQLGALERQLGAGEPRKPRVRMLKDGKYQILSDXXXXXXXXXXXXXVHRDKALTRRTVRAIQQLFNEGRISIEQKRRLLNEIIQHSNHEVPSMVEIAYELLLRDDDAENSPGGESKTLPAGQKSEAAEGERTKGSKSATSGA--SRADDILNEFLEQCRIIASAGEDDEE 460
BLAST of NO10G01960 vs. NCBI_GenBank
Match: XP_005842167.1 (hypothetical protein GUITHDRAFT_149726 [Guillardia theta CCMP2712] >EKX55187.1 hypothetical protein GUITHDRAFT_149726 [Guillardia theta CCMP2712]) HSP 1 Score: 104.0 bits (258), Expect = 1.200e-18 Identity = 108/309 (34.95%), Postives = 154/309 (49.84%), Query Frame = 0 Query: 49 EARELEADVRARQEYDVRAVTRLNDVFYQAFTEQDPKVMAELWLREPEVSCIHPGVAEVVVGYDRVMRVWKDILAPKRSWIK---ITPEDCRVVVRGNTAFAYCFERVVPDAAGSNLEQRLFATNVFVRRQGMWYIGHHHATLLKAPASDKPAQNQXXXXAALMQQLQQSLGLNGNKIINLGXXXXXXXXXXXXXXXXXXXXXXXAAQLGALERQLGAGESRKPRVRMLKDGKYQILSEXXXXXXXXXXXXGVQRDKALTRKTVRAIQQLFNDGRITIEQKRRLLNEIIQHSN-HEVPSMVEIAYELLL 354 EA L ++ D AV + N FY AF+ ++ ++M +W P V CIHPG A+ ++GYD ++ +W+++ + K ITP + +V VRG +AF C E V + E+R+ ATNVF + G WY+ HHHA+ + Q A + + S G+ N XXXXXXXXXXXXXXXXXXXXX XXXXXX + + +T +TV A+++L +G IT +QKR LL ++++H E S VEIAYELL+ Sbjct: 131 EASTLRDELSRMHMDDTSAVLKTNSDFYNAFSTKNIELMGTVWHNSPHVQCIHPG-AKPLLGYDNIVNMWRNMFQARDKAFKSTAITPSNVKVHVRGTSAFVTCTEEV----SSPGTERRMLATNVFRKLGGRWYLVHHHASQASVRPASIEDLLQGNSGGARVIRFDASSLREGDGHANADEIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLNER----ELMEGVTERTVAALRKLAKEGHITRDQKRVLLTDVVEHHQAGECASEVEIAYELLV 430
BLAST of NO10G01960 vs. NCBI_GenBank
Match: PIA51797.1 (hypothetical protein AQUCO_01100576v1 [Aquilegia coerulea]) HSP 1 Score: 89.7 bits (221), Expect = 2.300e-14 Identity = 59/189 (31.22%), Postives = 89/189 (47.09%), Query Frame = 0 Query: 5 ALAAVKPEDL---VIAPGGTNDDFTNEQELDYLEWLVRKYKRKGRLDEARELEADVRARQEYDVRAVTRLNDVFYQAFTEQDPKVMAELWLREPEVSCIHPGVAEVVVGYDRVMRVWKDILAPKRSWIKITPEDCRVVVRGNTAFAYCFERVVPDAAGSNLEQRLFATNVFVRRQGMWYIGHHHATLLK 191 ++ VK ED +I G D+ T E+EL + +A ++ +R QE AV N FY F E D M LW + + C+HPGV+ + GYD VM W + A ++I +D + V+G+ + C E V G++ + FATNVF R G W+I HHA+ ++ Sbjct: 152 SVCCVKSEDSDGNLIGQGTILDEQTLERELQVA-------VEEENYAQAAKIRDSLRFLQEDSKAAVLAANARFYNCFREGDLAAMRALWAKRDNICCVHPGVSG-ISGYDYVMGSWDYVCAEYDFPLEIEVKDVEIFVKGDVGYVTCTETV--KTKGTSNWGKQFATNVFERINGQWFICIHHASFVE 330
BLAST of NO10G01960 vs. NCBI_GenBank
Match: PIA51796.1 (hypothetical protein AQUCO_01100576v1 [Aquilegia coerulea]) HSP 1 Score: 89.7 bits (221), Expect = 2.300e-14 Identity = 59/189 (31.22%), Postives = 89/189 (47.09%), Query Frame = 0 Query: 5 ALAAVKPEDL---VIAPGGTNDDFTNEQELDYLEWLVRKYKRKGRLDEARELEADVRARQEYDVRAVTRLNDVFYQAFTEQDPKVMAELWLREPEVSCIHPGVAEVVVGYDRVMRVWKDILAPKRSWIKITPEDCRVVVRGNTAFAYCFERVVPDAAGSNLEQRLFATNVFVRRQGMWYIGHHHATLLK 191 ++ VK ED +I G D+ T E+EL + +A ++ +R QE AV N FY F E D M LW + + C+HPGV+ + GYD VM W + A ++I +D + V+G+ + C E V G++ + FATNVF R G W+I HHA+ ++ Sbjct: 88 SVCCVKSEDSDGNLIGQGTILDEQTLERELQVA-------VEEENYAQAAKIRDSLRFLQEDSKAAVLAANARFYNCFREGDLAAMRALWAKRDNICCVHPGVSG-ISGYDYVMGSWDYVCAEYDFPLEIEVKDVEIFVKGDVGYVTCTETV--KTKGTSNWGKQFATNVFERINGQWFICIHHASFVE 266
BLAST of NO10G01960 vs. NCBI_GenBank
Match: CEM12155.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 89.4 bits (220), Expect = 3.000e-14 Identity = 56/176 (31.82%), Postives = 85/176 (48.30%), Query Frame = 0 Query: 21 TND-DFTNEQELDYLEWLVRKYKRKGRLDEARELEADVRARQEYDVRAVTRLNDVFYQAFTEQDPKVMAELWLREPEVSCIHPGVAEVVVGYDRVMRVWKDIL-APKRSWIK---ITPEDCRVVVRGNTAFAYCFERVVPDAAGSN----LEQRLFATNVFVRRQGMWYIGHHHAT 188 TND ++ E L LE +++ +GR EA L D+ + V N FY AF+ + + M +W+ + C HP + + GY+ +M WK + A R K I P + VRG TA+ C E V+ +G++ +RL ATNVF + G W + HHHA+ Sbjct: 138 TNDEEWRTEAALADLETRMKRASDEGRYTEAAALRDDISKLHTDEYLRVLEANRRFYAAFSSKSLQEMQAVWMNNNMILCFHPSSPKPISGYEAIMDSWKRLFHATNRDGEKQRVIQPHNIAARVRGTTAWVTCEEVVLKKVSGNSSPVPTGRRLIATNVFHKLDGKWLLVHHHAS 313
BLAST of NO10G01960 vs. NCBI_GenBank
Match: WP_008944322.1 (DUF4440 domain-containing protein [Oceanibaculum indicum] >EKE76388.1 hypothetical protein P24_08574 [Oceanibaculum indicum P24]) HSP 1 Score: 89.0 bits (219), Expect = 3.900e-14 Identity = 48/130 (36.92%), Postives = 64/130 (49.23%), Query Frame = 0 Query: 72 NDVFYQAFTEQDPKVMAELWLREPEVSCIHPGVAEVVVGYDRVMRVWKDILAPKRSWIKITPEDCRVVVRGNTAFAYCFERVVPDAAGSNLEQRLFATNVFVRRQGMWYIGHHHATLLKAPASDKPAQNQ 202 N+ FY AF +D M LW R V+CIHPG V+ G + VM W+ IL + +TP D R V G + CFE E L ATN+FVR +G W + HH A P D+P +++ Sbjct: 11 NEAFYAAFAGRDYPAMEALWARRAPVACIHPGWG-VLEGREAVMESWRGILGNTGNAPSVTPRDARAFVLGEAGYVTCFEAFP--------EGFLIATNLFVREEGEWRLVHHQA----GPTRDQPPEDE 127
BLAST of NO10G01960 vs. NCBI_GenBank
Match: OEU22545.1 (hypothetical protein FRACYDRAFT_232703 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 89.0 bits (219), Expect = 3.900e-14 Identity = 85/346 (24.57%), Postives = 145/346 (41.91%), Query Frame = 0 Query: 22 NDDFTNEQELDYLEWLVRKYKRKGRLDEARELEADVRARQEYDVRAVTRLNDVFYQAFTEQDPKVMAELWLREPEVSCIHPGVAEVVVGYDRVMRVWKDILAP-----KRSWIKITPEDCRVVVRGNTAFAYCFERVVP------DAAGSNLEQRLFATNVFVRRQGMWYIGHHHATLLKAPASDKPAQNQXXXXAALMQQLQQS-LGLNGNKIINLG---XXXXXXXXXXXXXXXXXXXXXXXAAQLGALERQLGAGESRKPRVRMLKDGKYQILSEXXXXXXXXXXXXGVQRDKALTRKTVRAIQQLFNDGRITIEQKRRLLNEIIQHSNHEVPSMVEIAYELL 353 ++++ E+++ +E + K + A + A++ D V + N FY+AF+++D M LWL + CIHP + + G +M+ WK + +R+W I P + + V+ TA C E V S +L ATN+F + G WY+ +HH++ +D A + + ++ + S LGL N G LG L+ LG G P DG ++ R K++ K + A+++L N+GRI+ +QKR LL +II ++ S+VE+ Y+LL Sbjct: 141 SNEYQLEEQVSQIEEELYKAVKDQDFTTAAKRSAEISQLHVDDCGNVLQANSAFYRAFSDKDVGEMERLWLADRSCICIHPSFSP-LSGVRDIMKTWKRMFESSVGSFQRTW--IDPCEIHLTVKATTAIVTCEEHVYARRFVRGQRRKSERVNKLMATNIFRKVGGKWYMTYHHSSW----HADSEAAKRALKGRNIKKKSKPSILGLE-----NFGPVLGDESDKQNDDAGGPKIIASNLDFLKNLGGLDGMLGMG----PPGGGNTDGN-DLIPGTIISFSGKKNKKNKNRAKSVRSKCIDALRRLSNEGRISPKQKRVLLTDIISCTSRGEESLVEVGYKLL 469
BLAST of NO10G01960 vs. NCBI_GenBank
Match: PIA51795.1 (hypothetical protein AQUCO_01100576v1 [Aquilegia coerulea]) HSP 1 Score: 88.2 bits (217), Expect = 6.600e-14 Identity = 48/142 (33.80%), Postives = 72/142 (50.70%), Query Frame = 0 Query: 49 EARELEADVRARQEYDVRAVTRLNDVFYQAFTEQDPKVMAELWLREPEVSCIHPGVAEVVVGYDRVMRVWKDILAPKRSWIKITPEDCRVVVRGNTAFAYCFERVVPDAAGSNLEQRLFATNVFVRRQGMWYIGHHHATLLK 191 +A ++ +R QE AV N FY F E D M LW + + C+HPGV+ + GYD VM W + A ++I +D + V+G+ + C E V G++ + FATNVF R G W+I HHA+ ++ Sbjct: 163 QAAKIRDSLRFLQEDSKAAVLAANARFYNCFREGDLAAMRALWAKRDNICCVHPGVSG-ISGYDYVMGSWDYVCAEYDFPLEIEVKDVEIFVKGDVGYVTCTETV--KTKGTSNWGKQFATNVFERINGQWFICIHHASFVE 301
BLAST of NO10G01960 vs. NCBI_GenBank
Match: WP_012974861.1 (DUF4440 domain-containing protein [Azospirillum lipoferum] >BAI72935.1 hypothetical protein AZL_022970 [Azospirillum sp. B510]) HSP 1 Score: 87.0 bits (214), Expect = 1.500e-13 Identity = 50/126 (39.68%), Postives = 67/126 (53.17%), Query Frame = 0 Query: 71 LNDVFYQAFTEQDPKVMAELWLREPEVSCIHPGVAEVVVGYDRVMRVWKDIL-APKRSWIKITPEDCRVVVRGNTAFAYCFERVVPDAAGSNLEQRLFATNVFVRRQGMWYIGHHHATLLKAPASD 196 LN FY+AFT +D M LW VSCIHPG + G D V+ W+D+L AP S I + + RV + G+TA C E ++ DA L ATN+F R +G W + HH A + P +D Sbjct: 13 LNQAFYRAFTNRDAAAMEALWAETLPVSCIHPGWT-ALFGRDAVLTSWRDVLRAP--SGIAVQARNERVTLHGDTALVVC-EEMLGDAV-------LAATNLFAREKGSWRLAHHQAGPIAPPRAD 127
BLAST of NO10G01960 vs. NCBI_GenBank
Match: WP_067560347.1 (DUF4440 domain-containing protein [Oceanibaculum pacificum] >KZC97642.1 DUF4440 domain-containing protein [Oceanibaculum pacificum]) HSP 1 Score: 85.9 bits (211), Expect = 3.300e-13 Identity = 49/145 (33.79%), Postives = 72/145 (49.66%), Query Frame = 0 Query: 64 DVRAVTRLNDVFYQAFTEQDPKVMAELWLREPEVSCIHPGVAEVVVGYDRVMRVWKDILAPKRSWIKITPEDCRVVVRGNTAFAYCFERVVPDAAGSNLEQRLFATNVFVRRQGMWYIGHHHATLLKAPASDKPAQNQXXXXAAL 209 D A+ N+ FY AF +D M ++W + V+CIHPG ++ G + VM+VW+ ILA + I ITP + + G+ F CFE S E L ATN+FV+ W + HH A P D+P + + A+ Sbjct: 3 DRTALLFANEAFYAAFATRDMGAMEDIWAKRAPVACIHPGWG-LLEGREAVMQVWRSILAGNNAPI-ITPRGAKAFLYGDAGFVTCFE--------SLPEGFLIATNLFVKEDAAWRLVHHQA----GPTQDQPPEEEETAGRAM 133 The following BLAST results are available for this feature:
BLAST of NO10G01960 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO10G01960 ID=NO10G01960|Name=NO10G01960|organism=Nannochloropsis oceanica|type=gene|length=1380bpback to top protein sequence of NO10G01960.1 >NO10G01960.1-protein ID=NO10G01960.1-protein|Name=NO10G01960.1|organism=Nannochloropsis oceanica|type=polypeptide|length=422bpback to top Synonyms
Publications
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