NO10G01780, NO10G01780 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO10G01780 vs. NCBI_GenBank
Match: EWM25351.1 (Protein of unknown function DUF1003 [Nannochloropsis gaditana]) HSP 1 Score: 959.5 bits (2479), Expect = 8.000e-276 Identity = 559/1011 (55.29%), Postives = 657/1011 (64.99%), Query Frame = 0 Query: 1 MDGMQEEPFVSVRIPTAGQQLQASN---AQALRFRGGRGAA-PTHRPLIDQLLEDKSLHHHAEILRGLKQSLEEEKKDFLHLQEDVFRSFAEHELMEASFDRQFETKQTLSGRLADRMAEVGGSWRFVGFFAGFILIWCMINLLAGDAAWDPYPFILLNLCLSCLAAFQAPVIMMSQNRQVARDRGQSDYTARVNLRAELITRHINCKLDALISSAWKRLFESQALSTSILERLLETEQQHIKWRREASLNAHVRVRRNSKGILEELGDDEAPPSPVRRCPSQELIEAVLCPGAMLAVYDDDHGEGESITGVCLQRGVLGKQKQADMEAAAAEEEGRKPDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLAPPAAPALMASELPWLLETEEDAHTLYLMRTMLKAKGVSPQQLQQQQYDEECMVFEHRSSNLGDNFIGVVSHVRLESRDPSLATKGVVCCCGPVSRRGAMATTTTSAIPQRGRPVAASFVSAAVETASLVDTGGGAEPWFPFDLCYDLRFTEGAVLDSILAGDAILTLRNALDLPCMMAEGEIISMVLHPRGCPCSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLE------EKFLKLRSACPQAVFVSQGEVPPRFKPSLSKDREDRISQFWKRPLGRVTISYNPAPIFACITLRAGQMSVPRSVEFLSHHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSLPTPPYSFSPLSSTSESMVGSPPPAIPAXXXVTTPSLSSSSCDRGPLTRQSSGSMSLQKILAMNRASLTDRWQAPTKQEVSEANSNETRASSGRPQKQLYVIINPSAELLCNALAWGFFQAGEERAEGADDGSKGHRENAGTSTSGSISNSNFTNKEVPLRLGPRWEGVLPHNKWLQLPLIKNAGRYEIDLMVPIAGPAAVFFYSPQGRLRLRGFLRDDG 1002 MDG Q+EPFV V+I +A QQ ++N AQA+RFRGGRGA +HRPLIDQLLED SL HH EILRGLKQSLEEEKK++L LQEDVF SFAEHE+MEASFDRQFE KQ+ SGR+AD +AEVGGSWRFVGFFAGF+++W +IN+L+G +A+DPYPFILLNLCLSC++ FQAPVIMMSQNRQV RDRGQSDYTARVNLRAEL+TRHIN KLDALI+SAWKRLFESQALSTS+LERL++ EQQ + R+ A +H R SKG +E+ +++ PSP++R PSQE++EA+L PGA+L VY+ G G ++ G Q++ + A ++G+ PDT SLAPPAAPAL+A ELPWLLETEED HTLYLMRTML+AK Q +QQ+ +ECMVFEHRSS LGDNF+G+VSHVRLESRDPSLA+KGV+C P A Q GR V+ FV+AAVE ASLVDTGGGAE WFPFDLCYDL FT+GAVLDSILAGDAILTLRNALDLPCM AEGEIISMVLHPRGCPCSL + E LKLRSACPQAV VSQGEVPPRFKPSLSKDREDRISQFWKRPLGRVTISYNPAPIFAC+TLRAGQMSVPRSVEFL+H + LP + + LS TS + S A+P T + S S DR LT QSSG +SLQ+IL+ +RASL +RWQ+ KQE S + + ++ KQLY I+NPSAELLCNALAWGF Q EE EG++ +GH + + +G IS + KE+PLRL P WEG LPHN+W+QLPL + RYEIDL+VP+ GPAAVFF+SPQGRLRLRGFLRD+G Sbjct: 1 MDGAQKEPFVRVKISSAAQQSSSNNPAHAQAIRFRGGRGAGQASHRPLIDQLLEDASLRHHGEILRGLKQSLEEEKKEYLRLQEDVFTSFAEHEVMEASFDRQFEAKQSFSGRVADAVAEVGGSWRFVGFFAGFMMLWVVINILSGPSAFDPYPFILLNLCLSCMSGFQAPVIMMSQNRQVLRDRGQSDYTARVNLRAELVTRHINAKLDALITSAWKRLFESQALSTSLLERLMDMEQQQLDLRKAAHF-SHAGSR--SKGKMEDPTEEDI-PSPLQRRPSQEVVEALLQPGALLEVYNQGEGSEGFERGSVMENGEDEGQEEG-LITKMAVQQGQVPDT-------------GASASPVSPSSLYKTPLVALSLAPPAAPALLALELPWLLETEEDEHTLYLMRTMLRAK--RAQGPEQQRDWDECMVFEHRSSKLGDNFMGIVSHVRLESRDPSLASKGVICRAEP-------------ADLQPGRRVSDRFVTAAVEIASLVDTGGGAEAWFPFDLCYDLHFTDGAVLDSILAGDAILTLRNALDLPCMTAEGEIISMVLHPRGCPCSLLEAEADVQDGMQQQQTSGRNTRVAVAGEPDGGISGRERRAETLLKLRSACPQAVLVSQGEVPPRFKPSLSKDREDRISQFWKRPLGRVTISYNPAPIFACVTLRAGQMSVPRSVEFLTHR-----------------IDNLPATATAALESSAAPTAALSAAGPGSGMLTNTVPKLGASTSIAGIAASDADSGNGKSIKHPLRRANSGGARTMAAFFGLPPGGSTGTNLSRTSLPL-DSSGKALPPPPHPTMTTSQSISGDRLTLTHQSSGHLSLQRILSHSRASLPERWQSGMKQEASGLSES---SNVSHTPKQLYCIVNPSAELLCNALAWGFAQEEEESLEGSE--VRGHLHHESRTVAGRISKN---KKEIPLRLDPLWEGPLPHNQWVQLPLREQGNRYEIDLLVPVVGPAAVFFFSPQGRLRLRGFLRDNG 952
BLAST of NO10G01780 vs. NCBI_GenBank
Match: ORY30509.1 (DUF1003-domain-containing protein [Rhizoclosmatium globosum]) HSP 1 Score: 182.2 bits (461), Expect = 8.000e-42 Identity = 161/619 (26.01%), Postives = 233/619 (37.64%), Query Frame = 0 Query: 68 LEEEKKDFLHLQEDVFRSFAEHELMEASFDRQFETKQTLSGRLADRMAEVGGSWRFVGFFAGFILIWCMINLLAGD-----AAWDPYPFILLNLCLSCLAAFQAPVIMMSQNRQVARDRGQSDYTARVNLRAELITRHINCKLDALISSAWKRLFESQALSTSILERLLETEQQHIKWRREASLNAHVRVRRNSKGILEELGDDEAPPSPVRRCPSQELIEAVLCPGAMLAVYDDDHGEGESITGVCLQRGVLGKQKQADMEAAAAEEEGRKPDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLAPPAAPALMASELPWLLETEEDAHTLYLMRTMLKAKGVSPQQLQQQQYDEECMVFEHRSSNLGDNFIGVVSHVRLESRDPSLATKGVVCCCGPVSRRGAMATTTTSAIPQRGRPVAASFVSAAVETASLVDTGGGAEPWFPFDLCYDLRFTE-GAVLDSILAGDAILTLRNALDLPCMMAEGEIISMVLHPRGCPCSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLEEKFLKLRSACPQAVFV-SQGEVPPRFKPSLSKDREDRISQFWKRPLGRVTISYNPAPIFACITLRAGQMSVPRSVEF 680 LE+++K+ LQ D ++ E+E E + +QFE T + AD +A GGSW+F+G F+ W N+L G WDPYPFILLNL LS +AA QAPVIMMSQNRQ DR Q D+ + + LR+E RH+N KLD L+S W+RL E Q T +L+ L HI A + ++ + S+ ++ + + PG V GES + + P T SL P +A + A E W +ET D H L+ L E ++F H ++ GDNF+G+V+ V++E R S + VV YDL F + A LD +LAG+ + LRN +D+ CM G + + +H +G QA V G++PPR+K + RED+I+ FWK L ++ +Y+P A +TL GQ V+F Sbjct: 132 LEQDQKELSRLQNDAMKNLGEYEQQEQHWQKQFEQGWTFGEKCADNVARFGGSWKFIGVLVAFLCFWAFTNVLLGQPWSTATPWDPYPFILLNLFLSMIAALQAPVIMMSQNRQSQIDRIQGDFVSTIILRSEHQVRHVNAKLDHLLSEQWRRLLEIQQTQTDLLQMLQYRHSTHIHHEDAAKVMSNTGFQATSQTDID----------------ASLFTDPRSTPGNPFGVI-----RGESFSSI--------------------------PGT--------------------------------MSLLPGSAMSRPA-ETHWSVETHPDDHVRMLLAVYFGLDHSHSPSL-------EDLLFAHWHTD-GDNFLGIVNGVKVEVRQASSVVRRVV---------------------------------------------------------YDLTFNDPSASLDDVLAGEGTVELRNDMDVKCMEQVGRYLRIEIHHKG--------------------------------------------------QAPTVYGNGDLPPRYKSTFVNKREDKITDFWKARLTKINFTYSPPHQVAVLTLAEGQFCERMRVDF 555
BLAST of NO10G01780 vs. NCBI_GenBank
Match: WP_043776022.1 (DUF1003 domain-containing protein [Desulfomicrobium escambiense]) HSP 1 Score: 163.3 bits (412), Expect = 3.900e-36 Identity = 83/169 (49.11%), Postives = 116/169 (68.64%), Query Frame = 0 Query: 62 RGLKQSLEEEKKDFLHLQEDVFRSFAEHELMEASFDRQFETKQTLSGRLADRMAEVGGSWRFVGFFAGFILIWCMINLLAGDAAWDPYPFILLNLCLSCLAAFQAPVIMMSQNRQVARDRGQSDYTARVNLRAELITRHINCKLDALISSAWKRLFESQALSTSILERL 231 R L + LEEEK + L+EDV RS + +L+ ++ + ++ T+ RLADR+A+ GGSW+F+ FAG +++W N A+DPYPFILLNL LSCLAA QAPVIMMSQNRQ A+DR +S+ +VNL+AEL +H+N K+D L++ W+RL E Q L ++E L Sbjct: 60 RFLAEMLEEEKGELTRLEEDVLRSLRDQDLLSSNINEEYSESLTMGERLADRLADFGGSWKFILIFAGTLVVWICWNAYQAAQAFDPYPFILLNLVLSCLAALQAPVIMMSQNRQEAKDRLRSENDYQVNLKAELEIKHLNEKVDHLLTRQWQRLLEIQDLQVQLIEDL 228
BLAST of NO10G01780 vs. NCBI_GenBank
Match: WP_027715871.1 (DUF1003 domain-containing protein [Desulfuromonas sp. TF]) HSP 1 Score: 159.5 bits (402), Expect = 5.600e-35 Identity = 84/170 (49.41%), Postives = 114/170 (67.06%), Query Frame = 0 Query: 62 RGLKQSLEEEKKDFLHLQEDVFRSFAEHELMEASFDRQFETKQTLSGRLADRMAEVGGSWRFVGFFAGFILIWCMIN-LLAGDAAWDPYPFILLNLCLSCLAAFQAPVIMMSQNRQVARDRGQSDYTARVNLRAELITRHINCKLDALISSAWKRLFESQALSTSILERL 231 R ++ LE EK + L+++V S E + ++ D QFE K T RLADR+A++GGSW F+ FAGF+L+W +N + +DPYPFILLNL LSCLAA QAP+IMMSQNRQ ARDR +S+ RVNL+AEL RH+N K+D L+S W+RL E Q + ++ + Sbjct: 61 RHIQSLLEAEKGELTALEQEVLDSMMRQETLSSNIDAQFERKLTFGERLADRIADIGGSWSFILTFAGFLLLWVAVNSFVLLRRPFDPYPFILLNLILSCLAAIQAPIIMMSQNRQEARDRLRSENDYRVNLKAELEIRHLNEKIDHLLSRQWERLVEIQQVQLELMSEI 230
BLAST of NO10G01780 vs. NCBI_GenBank
Match: WP_002650159.1 (DUF1003 domain-containing protein [Blastopirellula marina] >EAQ82317.1 hypothetical protein DSM3645_01345 [Blastopirellula marina DSM 3645]) HSP 1 Score: 159.1 bits (401), Expect = 7.300e-35 Identity = 82/168 (48.81%), Postives = 117/168 (69.64%), Query Frame = 0 Query: 64 LKQSLEEEKKDFLHLQEDVFRSFAEHELMEASFDRQFETKQTLSGRLADRMAEVGGSWRFVGFFAGFILIWCMINLLA-GDAAWDPYPFILLNLCLSCLAAFQAPVIMMSQNRQVARDRGQSDYTARVNLRAELITRHINCKLDALISSAWKRLFESQALSTSILERL 231 ++QSLE E+ + L++ V S +HE++ + D +FE K++L RLADR+A GGSW F+ F +++W +N +A +DP+PFILLNL LSCLAA QAPVIMMSQNRQ A+DR ++++ RVNL+AEL RH++ KLD L++ W+RL E Q L T +LE + Sbjct: 62 VQQSLETERGELSVLEDQVVESLRQHEILAENPDEEFEEKKSLGQRLADRVASFGGSWTFILLFGAVLVVWIALNSIALLTKPFDPFPFILLNLVLSCLAAIQAPVIMMSQNRQEAKDRLRAEHDYRVNLKAELEIRHLHSKLDLLLTHQWQRLLEIQQLQTDLLEEI 229
BLAST of NO10G01780 vs. NCBI_GenBank
Match: OGP58916.1 (hypothetical protein A2V67_20760 [Deltaproteobacteria bacterium RBG_13_61_14]) HSP 1 Score: 155.6 bits (392), Expect = 8.100e-34 Identity = 84/172 (48.84%), Postives = 115/172 (66.86%), Query Frame = 0 Query: 68 LEEEKKDFLHLQEDVFRSFAEHELMEASFDRQFETKQTLSGRLADRMAEVGGSWRFVGFFAGFILIWCMINLLA-GDAAWDPYPFILLNLCLSCLAAFQAPVIMMSQNRQVARDRGQSDYTARVNLRAELITRHINCKLDALISSAWKRLFESQALSTSILERLLETEQQHI 239 LE EK + L+E+V S E E++ + + +F+ K TL + ADR+AE GGSW F+G FAG IL+W +IN +A +DPYP+ILLNL LSCLAA QAPVIMMSQNRQ ARDR +++ VNL+AEL R +N KLD L++ W+RL E Q + ++E + ++ I Sbjct: 59 LETEKGELSALEEEVVSSMKEPEIISKNVNLEFDRKLTLGEQAADRIAEFGGSWGFIGIFAGVILVWIIINSIALAMRPFDPYPYILLNLVLSCLAAMQAPVIMMSQNRQEARDRLGAEHDYAVNLKAELEIRQLNAKLDQLLNHQWQRLLEIQRIQMELMEAHVRKDRSGI 230
BLAST of NO10G01780 vs. NCBI_GenBank
Match: WP_077022888.1 (DUF1003 domain-containing protein [Fuerstia marisgermanicae] >APZ91079.1 putative membrane protein [Fuerstia marisgermanicae]) HSP 1 Score: 154.8 bits (390), Expect = 1.400e-33 Identity = 79/164 (48.17%), Postives = 110/164 (67.07%), Query Frame = 0 Query: 68 LEEEKKDFLHLQEDVFRSFAEHELMEASFDRQFETKQTLSGRLADRMAEVGGSWRFVGFFAGFILIWCMINLLAG-DAAWDPYPFILLNLCLSCLAAFQAPVIMMSQNRQVARDRGQSDYTARVNLRAELITRHINCKLDALISSAWKRLFESQALSTSILERL 231 L EEK + L+ DV S EHE++ + + + + + T+ RLAD +A GGSW F+ FF G +++W +N +A ++DPYPFILLNL LSCLAA QAPVIMMSQNRQ +DR +++ RVNL++EL RH++ KLD L++ W RL E Q + T +LE L Sbjct: 61 LTEEKGELTSLERDVVESLREHEILSQNLNTEIDDESTVGQRLADHVASFGGSWTFILFFGGVLVVWITVNSIAMLGKSFDPYPFILLNLVLSCLAALQAPVIMMSQNRQEIKDRLRAENDYRVNLKSELEIRHLHSKLDLLLTHQWHRLLEIQQVQTDLLEEL 224
BLAST of NO10G01780 vs. NCBI_GenBank
Match: WP_088872619.1 (DUF1003 domain-containing protein [Nitrospirillum amazonense] >ASG21972.1 hypothetical protein Y958_11845 [Nitrospirillum amazonense CBAmc]) HSP 1 Score: 154.5 bits (389), Expect = 1.800e-33 Identity = 78/165 (47.27%), Postives = 110/165 (66.67%), Query Frame = 0 Query: 64 LKQSLEEEKKDFLHLQEDVFRSFAEHELMEASFDRQFETKQTLSGRLADRMAEVGGSWRFVGFFAGFILIWCMINLLAGDAAWDPYPFILLNLCLSCLAAFQAPVIMMSQNRQVARDRGQSDYTARVNLRAELITRHINCKLDALISSAWKRLFESQALSTSILE 229 +++ L++EK + L V S A HE + + + + ++TL R++D +A GGSW F+ F GF++IW +I+ GD ++DPYPFILLNL LSCLAA QAP+IMMSQ RQ A+DR +S+ RVNL+AEL RH++ K+D LI WKRL E Q L I++ Sbjct: 63 VEELLQQEKGELTELDRQVAESIATHETLAENIEEGYAEERTLGERMSDHLASFGGSWTFILTFGGFLIIWMIISSFQGDKSFDPYPFILLNLILSCLAAIQAPIIMMSQKRQEAKDRLRSENDYRVNLKAELEIRHLHEKIDYLIQRQWKRLTEIQQLQLEIMQ 227
BLAST of NO10G01780 vs. NCBI_GenBank
Match: WP_040845743.1 (DUF1003 domain-containing protein, partial [Nitrospirillum amazonense]) HSP 1 Score: 154.1 bits (388), Expect = 2.300e-33 Identity = 77/165 (46.67%), Postives = 110/165 (66.67%), Query Frame = 0 Query: 64 LKQSLEEEKKDFLHLQEDVFRSFAEHELMEASFDRQFETKQTLSGRLADRMAEVGGSWRFVGFFAGFILIWCMINLLAGDAAWDPYPFILLNLCLSCLAAFQAPVIMMSQNRQVARDRGQSDYTARVNLRAELITRHINCKLDALISSAWKRLFESQALSTSILE 229 +++ L++EK + L V S A HE + + + + ++TL R++D +A GGSW F+ F GF+++W +I+ GD ++DPYPFILLNL LSCLAA QAP+IMMSQ RQ A+DR +S+ RVNL+AEL RH++ K+D LI WKRL E Q L I++ Sbjct: 43 VEELLQQEKGELTELDRQVAESIATHETLAENIEEGYAEERTLGERMSDHLASFGGSWTFILTFGGFLIVWMIISSFQGDKSFDPYPFILLNLILSCLAAIQAPIIMMSQKRQEAKDRLRSENDYRVNLKAELEIRHLHEKIDYLIQRQWKRLTEIQQLQLEIMQ 207
BLAST of NO10G01780 vs. NCBI_GenBank
Match: PIS01040.1 (hypothetical protein COT84_04355 [Chlamydiae bacterium CG10_big_fil_rev_8_21_14_0_10_35_9]) HSP 1 Score: 153.7 bits (387), Expect = 3.100e-33 Identity = 84/181 (46.41%), Postives = 114/181 (62.98%), Query Frame = 0 Query: 64 LKQSLEEEKKDFLHLQEDVFRSFAEHELMEASFDRQFETKQTLSGRLADRMAEVGGSWRFVGFFAGFILIWCMINLLAGDA-AWDPYPFILLNLCLSCLAAFQAPVIMMSQNRQVARDRGQSDYTARVNLRAELITRHINCKLDALISSAWKRLFESQALSTSILERLLETEQQHIKWRRE 244 ++ L E+K + L+ +V +SF EHE++ +++FE T RLAD++A+ GGSW+F+ F IL W IN ++ +DPYP+ILLNL LSCLAA QAP+IMMSQNRQ ARD+ QSDY NL+AEL R ++ KLD + W RL E Q + + E LL EQ H K + E Sbjct: 41 IQDLLIEDKGELSQLENEVLQSFEEHEILAEDMNKKFEKNLTFGERLADKIAKFGGSWKFISIFISIILSWMTINTVSAFIHPFDPYPYILLNLFLSCLAAIQAPIIMMSQNRQAARDKLQSDYEYTTNLKAELEIRQLHSKLDQFMKKHWYRLLEIQQIQIDLAEDLL--EQNHKKTKDE 219 The following BLAST results are available for this feature:
BLAST of NO10G01780 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO10G01780 ID=NO10G01780|Name=NO10G01780|organism=Nannochloropsis oceanica|type=gene|length=3678bpback to top protein sequence of NO10G01780.1 >NO10G01780.1-protein ID=NO10G01780.1-protein|Name=NO10G01780.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1004bpback to top Synonyms
Publications
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