NO10G01680, NO10G01680 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO10G01680 vs. NCBI_GenBank
Match: EWM25379.1 (Protein of unknown function DUF1674 [Nannochloropsis gaditana]) HSP 1 Score: 112.8 bits (281), Expect = 9.300e-22 Identity = 55/93 (59.14%), Postives = 65/93 (69.89%), Query Frame = 0 Query: 63 DNVAAVKVTRATAVDKEEEDGKVVVADKHMITTIKKPACGPDPVEEHEDEMEEMFVMGPSGTMEWGGPTRGGQHKEPTRYGDWERKGRCSDFS 156 D A + A KE+E G ++ + +KK CG VEE EDEMEEMFVMGPSG +EWGGPTRGG+HKEPTR+GDWERKGRC+DFS Sbjct: 76 DEAQATSPGPSNARVKEDEGGVIIEVGTTSQSAVKKDTCG--EVEEAEDEMEEMFVMGPSGRVEWGGPTRGGRHKEPTRFGDWERKGRCTDFS 166
BLAST of NO10G01680 vs. NCBI_GenBank
Match: CBJ29905.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 75.1 bits (183), Expect = 2.200e-10 Identity = 43/87 (49.43%), Postives = 51/87 (58.62%), Query Frame = 0 Query: 68 VKVTRATAVDKEEEDGKVVVADKHMITTIKKPACGPDPVEEHEDEMEEMFVMGPSGTMEWGGPTRGGQHKEPTRYGDWERKGRCSDF 155 V T+A A D+ + G V K CG + ++EMEEM GP+G EWGGPTRGG EPTR+GDWERKGRCSDF Sbjct: 57 VTETKAGAGDRPGQQGPV-----------KLDLCGEIEDDVGDEEMEEMLQEGPAG-KEWGGPTRGGVLGEPTRFGDWERKGRCSDF 131
BLAST of NO10G01680 vs. NCBI_GenBank
Match: XP_008870640.1 (hypothetical protein H310_07118 [Aphanomyces invadans] >ETW00505.1 hypothetical protein H310_07118 [Aphanomyces invadans]) HSP 1 Score: 73.6 bits (179), Expect = 6.300e-10 Identity = 30/42 (71.43%), Postives = 38/42 (90.48%), Query Frame = 0 Query: 113 MEEMFVMGPSGTMEWGGPTRGGQHKEPTRYGDWERKGRCSDF 155 ME+M ++GP+GT EWGGP RGG++KEPTR+GDWE+KGRC DF Sbjct: 54 MEDMVMIGPAGT-EWGGPQRGGKYKEPTRFGDWEKKGRCCDF 94
BLAST of NO10G01680 vs. NCBI_GenBank
Match: CCI49539.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 71.2 bits (173), Expect = 3.100e-9 Identity = 38/87 (43.68%), Postives = 54/87 (62.07%), Query Frame = 0 Query: 74 TAVDKEEEDGKVVVADKHMITTIKKPACGPDPVE------EHEDEMEEMFVMGPSGTMEWGGPTRGGQHKEPTRYGDWERKGRCSDF 155 +AV K ++ ++ K + I KP + ++ E ED+ E++ GPSG E+GGPT+GG+ KEPTRYGDWER GRC+DF Sbjct: 21 SAVKKYSKNSSLLQYQKRYWSDITKPKVDSNTLQELDLDYESEDDEEDVLDSGPSGP-EYGGPTKGGKLKEPTRYGDWERNGRCTDF 106
BLAST of NO10G01680 vs. NCBI_GenBank
Match: GAX20160.1 (hypothetical protein FisN_17Lh111 [Fistulifera solaris]) HSP 1 Score: 71.2 bits (173), Expect = 3.100e-9 Identity = 39/66 (59.09%), Postives = 45/66 (68.18%), Query Frame = 0 Query: 95 TIKKPACGPDPVEEHEDEM--EEMFVMGPSG----TMEWGGPTRGGQHKEPTRYGDWERKGRCSDF 155 T+K ACG D E+ +DEM E+MFV TMEWGGP RGG+ EPTRYGDWERKGR +DF Sbjct: 59 TLKIEACG-DIKEDDDDEMEKEKMFVEPHESFEFRTMEWGGPRRGGRLPEPTRYGDWERKGRATDF 123
BLAST of NO10G01680 vs. NCBI_GenBank
Match: OQR99564.1 (hypothetical protein ACHHYP_05758 [Achlya hypogyna]) HSP 1 Score: 70.1 bits (170), Expect = 6.900e-9 Identity = 28/40 (70.00%), Postives = 36/40 (90.00%), Query Frame = 0 Query: 115 EMFVMGPSGTMEWGGPTRGGQHKEPTRYGDWERKGRCSDF 155 +M +GP+GT EWGGP+RGG++KEPTR+GDWE+KGRC DF Sbjct: 57 DMVTIGPAGT-EWGGPSRGGKYKEPTRFGDWEKKGRCMDF 95
BLAST of NO10G01680 vs. NCBI_GenBank
Match: CCA26607.1 (AlNc14C394G11311 [Albugo laibachii Nc14]) HSP 1 Score: 69.7 bits (169), Expect = 9.000e-9 Identity = 31/47 (65.96%), Postives = 37/47 (78.72%), Query Frame = 0 Query: 108 EHEDEMEEMFVMGPSGTMEWGGPTRGGQHKEPTRYGDWERKGRCSDF 155 E ED+ EE+ GPSG E+GGPT+GG+ EPTRYGDWER GRC+DF Sbjct: 62 ESEDDEEEILTSGPSGP-EYGGPTKGGKLPEPTRYGDWERNGRCTDF 107
BLAST of NO10G01680 vs. NCBI_GenBank
Match: XP_009826477.1 (hypothetical protein H257_03878 [Aphanomyces astaci] >ETV84785.1 hypothetical protein H257_03878 [Aphanomyces astaci]) HSP 1 Score: 69.3 bits (168), Expect = 1.200e-8 Identity = 28/40 (70.00%), Postives = 36/40 (90.00%), Query Frame = 0 Query: 115 EMFVMGPSGTMEWGGPTRGGQHKEPTRYGDWERKGRCSDF 155 +M V+GP+G +EWGGP RGG++KEPTR+GDWE+KGRC DF Sbjct: 52 DMVVIGPAG-VEWGGPQRGGKYKEPTRFGDWEKKGRCCDF 90
BLAST of NO10G01680 vs. NCBI_GenBank
Match: OWZ11198.1 (hypothetical protein PHMEG_00015815 [Phytophthora megakarya]) HSP 1 Score: 68.9 bits (167), Expect = 1.500e-8 Identity = 30/40 (75.00%), Postives = 36/40 (90.00%), Query Frame = 0 Query: 115 EMFVMGPSGTMEWGGPTRGGQHKEPTRYGDWERKGRCSDF 155 +M +GPSG +E+GGPTRGG+ KEPTR+GDWERKGRCSDF Sbjct: 58 DMVAIGPSG-VEYGGPTRGGKLKEPTRFGDWERKGRCSDF 96
BLAST of NO10G01680 vs. NCBI_GenBank
Match: XP_002903726.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY54781.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 68.6 bits (166), Expect = 2.000e-8 Identity = 33/65 (50.77%), Postives = 46/65 (70.77%), Query Frame = 0 Query: 91 HMITTIKKPACGPDPVEEHE-DEMEEMFVMGPSGTMEWGGPTRGGQHKEPTRYGDWERKGRCSDF 155 H+ T P + +++ + ++ EE +GP G +E+GGPTRGG+ KEPTR+GDWERKGRCSDF Sbjct: 34 HITNTPAAPRSDGENLDDLDGNDAEETVAIGPLG-VEYGGPTRGGKLKEPTRFGDWERKGRCSDF 97 The following BLAST results are available for this feature:
BLAST of NO10G01680 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO10G01680 ID=NO10G01680|Name=NO10G01680|organism=Nannochloropsis oceanica|type=gene|length=468bpback to top protein sequence of NO10G01680.1 >NO10G01680.1-protein ID=NO10G01680.1-protein|Name=NO10G01680.1|organism=Nannochloropsis oceanica|type=polypeptide|length=156bpback to top Synonyms
Publications
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