NO10G01660, NO10G01660 (gene) Nannochloropsis oceanica

Overview
NameNO10G01660
Unique NameNO10G01660
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2785
Alignment locationchr10:469898..472682 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:469898..472682 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO10G01660 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL052nonsL052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR004ncniR004Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR015ngnoR015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001038NSK001038Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO10G01660.1NO10G01660.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|629723gene_4049Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO10G01660.1NO10G01660.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO10G01660 ID=NO10G01660|Name=NO10G01660|organism=Nannochloropsis oceanica|type=gene|length=2785bp
CATTTCTTTCTGCACACCATGTCGCTCTGCCCAACCGACAAACAAGGGCA
CGCCTTGGTTGCCAGGCGCAACCTTTGCCAGCTGTTCGAGGCTCACCCCT
GTCTGCAGCAGCCGCGATACCATAAATTGGGATTGCGCATCACTCTTCCT
TCTACGGAGCAATCGCAATCACGATCCGAAAGGTTTGAATCTCAGgtacg
atttctcggtttcttgccctcttttgctccccctgaccttccttccccgg
cccctcgccccttcattacctccttccctcttccccttccaagAGGTCAA
CTGGAACCAGGTTTCGCGGCCGCCGTTCGCACGGCGACGAAGAATATGTC
TTCCTTGGCGATGATGAGAAGGAGGGGTGTGCTAGCGGCAGCGACATAGA
CGACGAAGAGGACGCCACCAGCAGCATCAGCAGTGGACGGGACTCCATGT
TCTATGGAGGCAGCGCTGGTAGCGAGGAGGGGGACGAGCTGCAGCACGAG
CAGCTTGGAGAGAGCGTACCAGGCATCGGTTCATTCTACGTCAAGCGGGA
CCAGGTTCTGCGGCGGCGGCGGCGGGACTTCGTGAAGCTCAAGCGGTCGC
AAAAGgtaggaggtacggatggagggcacattcaaacgagattatgtgcc
catgtcttcgtctctttcgttttcgcctgcgtccccgcaaaatagcgaat
cgttcgctctattcatccttacctaatggtccttcctctcctagGCCAAA
ATCGTCAAGACGGCCTATTCCGTGATCGAGGCAGTGTGCGAGACCTTTTT
CCCGGGGGAGCGCATGGAGCTCCTCGACGCAATCACTAGTGCTCATAAAA
CCTACCGCCGCCGGCACCAAAATAGCCTACTCTTCGGTGGCACTCTTAAC
GCAACAACTAGCAGTAGGTTCGGCGGCGGCGGCAGCAGCAGCAGCAGTAG
CAGCAGCAGCAGCAGCAGCAGCAGCAGCTGCTGCGCCACCTCCATGGTGT
CGGGCAAGAAGCAGCAGAATGCCTCCCCCCCCTGCACTCCTCCCAACCCC
GCAATTTTACGTGCCCCCAGCACCCGTCGCACACGCGCCAGCAGCCTCCC
TATGCCCATGGCGGGAGATACACGTAATCCCGACCCTGAAGCTGCTTCTT
TGTCTTCCCCTTCTCTGATCGGCCATGCCATGACGCATAGTACTGCCTCT
GCTGCTGGGAGCACCACCTCGTCCATGTCTCTGACCTCTTTGGGGTGGCA
CCGTCAGTTTGGGGGGTTGTTACATTCCCCAGCTAATTCTTCTTCATCTT
GTCTTTCGTTCGAGCAGGCACAAGGAAAATGCCGGGCGTTAAGCATGAAC
ATGAAATTGGAGGGGGAAATGGAAACGACGAAGAAGTCTTCTTCTATTTC
CTCCTTTCCTTCCATCGTCGCAAGCGCGCCTTTCCCCTCTTCTCCCTCCT
CTTCCTCCATGGGCTCTTTCTCCCAAACGTCTGCACAGCCGATACAGTCC
TATATCGTGCCATCTTGTCGCGATAATGCTGCTGCTGCCACTGCAGCTGG
TAGGATGTTGATCCCTCCCGCTCCTTCCTGGTCGCCTCCTCGCACTAGCG
TCTCGCCCCAGTTTTCCTCGCCCTCCCCCTCCCTCCCACTTTCTTCTTCT
CCATCCATGGGTGTCCAGGACAGAGCAACCTGGCAGGAGGACAGAAGCGT
ACCTGAGGAAGCCTGGATTTTACACGGCTTACGCTTCGCCGCGGGTGCTG
GTGGAATTATCGAGTGTTAGAGGGGAGGGAGACAGGGAGGGACGGACAGA
CAGCGGACACACATCCTAGTAGCGTGTCGCTGCAGTGAACTTTGAGATTT
GGCGCTACGGTGAAGGCAGGAGGGTTGATAGGAAGGATTCGGTCCATTTG
TGGTGTTGTGTGAAAAGTAGAATTATAGGGTGTCGATGCTAGTCGTTGGG
AAAGGAGAAGGGATATGTGAATGACTGCTCGGTGTGAAAGGGAATAAGAG
CTTAATTGGATTCCCAGCCGTAGTGTTAGTTAGCGTAGTAATGGCACCTA
GACAATCATAACCGACGAGCACTGGACGGAAGACGACAGGCGATAATAGA
TTATCCCAGAAGGTAAAAAAGGCAGGTACATGTACTCTTATTTTTTGTGA
TTCAAAGTTTGTAGGCATCAGGCTAGAGGAAACAGTGGTCACCGTGCTCG
CCCTTCTCTGGAAGTATTATGACGATGAGAAGTGACATGTCCTCTTGGAG
AACTAGGAAACAAACAGTGTGGCTACCTTGCAATAGGCTATTGAGTTTTA
TTAGAAGAGAGAGGAGGATGTTAGGGACAAACCTCGTAGAAATGGGGTCG
CTAGGATAGCAAAAGGCCTGGGATGAAATGGTTACCGTGCAAAGAGAAAT
AGACAGGCAACAGATAGGAGCGTACACAATAATAATCTTAAAGCGTGTGT
TTGAGAGAAAAGATGTCAGCAGCGGCACTACAGGAGAAAAACATAGGACA
CAGAAGCAAGCGAAAGAGGTACACAGATAAGGACATGCATGGGTACTTTA
GTATCGACGTATGGGGGACGGGAAAGAACAAGGGGAAGGAAAAAAGAGAT
GGAAGTGGGGGAAAGAAGCGGGAGAGATTATACACCAAGCGGGGATGGGA
AAGTAAGAGGAAAACATCAAGAATGTCAAGTGCATCCAAAGGAGAAAATC
GTCTATGTTAGTTTCGATACACTTATTCTATGAAAGAAATGGTCCCCAAT
ATTAGAAATACCATTTGCCGGCCGGGCCCATCAAG
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protein sequence of NO10G01660.1

>NO10G01660.1-protein ID=NO10G01660.1-protein|Name=NO10G01660.1|organism=Nannochloropsis oceanica|type=polypeptide|length=505bp
MSLCPTDKQGHALVARRNLCQLFEAHPCLQQPRYHKLGLRITLPSTEQSQ
SRSERFESQRSTGTRFRGRRSHGDEEYVFLGDDEKEGCASGSDIDDEEDA
TSSISSGRDSMFYGGSAGSEEGDELQHEQLGESVPGIGSFYVKRDQVLRR
RRRDFVKLKRSQKAKIVKTAYSVIEAVCETFFPGERMELLDAITSAHKTY
RRRHQNSLLFGGTLNATTSSRFGGGGSSSSSSSSSSSSSSSCCATSMVSG
KKQQNASPPCTPPNPAILRAPSTRRTRASSLPMPMAGDTRNPDPEAASLS
SPSLIGHAMTHSTASAAGSTTSSMSLTSLGWHRQFGGLLHSPANSSSSCL
SFEQAQGKCRALSMNMKLEGEMETTKKSSSISSFPSIVASAPFPSSPSSS
SMGSFSQTSAQPIQSYIVPSCRDNAAAATAAGRMLIPPAPSWSPPRTSVS
PQFSSPSPSLPLSSSPSMGVQDRATWQEDRSVPEEAWILHGLRFAAGAGG
IIEC*
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Synonyms
Publications