NO10G01650, NO10G01650 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO10G01650 vs. NCBI_GenBank
Match: EWM25436.1 (hypothetical protein Naga_100005g87 [Nannochloropsis gaditana]) HSP 1 Score: 320.9 bits (821), Expect = 4.600e-84 Identity = 168/259 (64.86%), Postives = 187/259 (72.20%), Query Frame = 0 Query: 32 VMVNANDKTRPFTRLQST-----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFNQPLRPNEKVKFLQKMAKGNVDPMELFTRGVNSKGFQVLLKNVEIQHRILEEMPLLAAFDGFRQIMGRRLNDEQTAEGFTRGVQNILTFAKEAFVKIKDPQQTVNTIAKMAADPNPAIQDLFRRAQAGDSKAVEELQDVFNDLHFPGVNVRVLREVAENHTFDKLLAMPEIMRFIDRDETLSKLFRSDIKETF 280 ++V ANDK RPFTRLQST GF+QPLRPN+KV FLQK+AKGNVDP+ELFTRGV SK FQ +LKNVEIQHRIL+EMPLLAAFDGFRQI GRRL+ +T EGF GVQN++ FAK AF+K+KDPQQT TIAKMAADPNPAIQ LFRRAQ GD AVEELQDVFNDLHFPGV++RVLREV NHTF+KLL+MPEIMRFIDR+E S FRSDIKETF Sbjct: 48 MIVKANDKARPFTRLQSTTGNVVDTHGQQLDHNEQQRNQETLDDRNGKERQQAKRKRRLQQAASGFDQPLRPNDKVAFLQKIAKGNVDPLELFTRGVKSKAFQAVLKNVEIQHRILKEMPLLAAFDGFRQITGRRLSARETMEGFAIGVQNVIDFAKVAFIKVKDPQQTAATIAKMAADPNPAIQSLFRRAQEGDPAAVEELQDVFNDLHFPGVDMRVLREVRRNHTFEKLLSMPEIMRFIDRNEFASNFFRSDIKETF 306
BLAST of NO10G01650 vs. NCBI_GenBank
Match: EWM22205.1 (hypothetical protein Naga_100291g6 [Nannochloropsis gaditana]) HSP 1 Score: 160.2 bits (404), Expect = 1.000e-35 Identity = 115/255 (45.10%), Postives = 166/255 (65.10%), Query Frame = 0 Query: 20 VLVMLIVLVGAAVMVNANDK-TRPFTRLQSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFNQPLRPNEKVKFLQKMAKGNVDPMELFTRGVNSKGFQVLLKNVEIQHRILEEMPLLAAFDGFRQIM-GRRLNDEQTAEGFTRGVQNILTFAKEAFV-KIKDPQQTVNTIAKMAADPNPAIQDLFRRAQAGDSKAVEELQDVFNDLHFPGVNVRVLREVAENHTFDKLLAMPEIMRFIDRDETLSKLF 272 +LV+L V +G V +D+ +RPF+RLQS XXXXXXXXXXXXXXXXXXXXXXXXX +P+ + +L + K +P+++F +N+KGF+ +L N +IQHR+L++ PLL A GF I RRL+ E+T F+ G+ +L A +AF K+ +P + T+AKMAA +P IQ+LF+RA+AG+ AVEELQD F + H+ G++ + RE+++ H DK MPE+M FI +D +L+K F Sbjct: 12 LLVILAVFMGCTVHAQEHDRSSRPFSRLQSXXXXXXXXXXXXXXXXXXXXXXXXXXF--------------TKPSSRAGYLLNLTKNTFNPVQVFKDAMNTKGFKAILDNPDIQHRVLKDFPLLGALTGFSTIKDNRRLSAEETKNSFSTGMNTLLNLADDAFFNKVNEPDKVSATLAKMAASSDPGIQNLFKRARAGEQGAVEELQDEFVNQHYSGMDGKAFREISKQHNGDKFKQMPEMMHFIQKDASLAKAF 252
BLAST of NO10G01650 vs. NCBI_GenBank
Match: EWM23494.1 (hypothetical protein Naga_100198g11 [Nannochloropsis gaditana]) HSP 1 Score: 152.9 bits (385), Expect = 1.700e-33 Identity = 78/188 (41.49%), Postives = 119/188 (63.30%), Query Frame = 0 Query: 85 GFNQPLRPNEKVKFLQKMAKGNVDPMELFTRGVNSKGFQVLLKNVEIQHRILEEMPLLAAFDGFRQIMGRRLNDEQTAEGFTRGVQNILTFAKEAFVKIKDPQQTVNTIAKMAADPNPAIQDLFRRAQAGDSKAVEELQDVFNDLHFPGVNVRVLREVAENHTFDKLLAMPEIMRFIDRDETLSKLFR 273 G P+ K F QK+ K +D +ELF SK F+ +L+NVEIQHRI+E +P+L A GFR+ GRRL D++T GF++GV+N+L K + +P IA+++ +P IQDLF+ A D +V EL+++ +PGV++ +L++V + TFDKLL +PE+ RFID+D +S++FR Sbjct: 121 GLFDPVGSPGKSAFFQKVKKDGIDSVELFETLFKSKAFESILENVEIQHRIIEGVPILGAVSGFREARGRRLTDQETTAGFSKGVRNLLEMFKTSAKHALNPTLMNERIAELSKSDDPEIQDLFKGASENDEASVLELKNLAARDLYPGVDLEILQDVMNSLTFDKLLDIPEMARFIDQDPYISRVFR 308
BLAST of NO10G01650 vs. NCBI_GenBank
Match: XP_005854196.1 (hypothetical protein NGA_0186800 [Nannochloropsis gaditana CCMP526] >EKU22160.1 hypothetical protein NGA_0186800 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 147.1 bits (370), Expect = 9.100e-32 Identity = 118/285 (41.40%), Postives = 167/285 (58.60%), Query Frame = 0 Query: 20 VLVMLIVLVGAAVMVNANDK-TRPFTRLQSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFNQPLRPNEKVKFLQKMAKGNVDPMELFTRGVNSKGFQVLLKNVEIQHRILEEMPLLAAFDGFR---------------QIMGRRL------------NDE----QTAEGFTRGVQNILTFAKEAFV-KIKDPQQTVNTIAKMAADPNPAIQDLFRRAQAGDSKAVEELQDVFNDLHFPGVNVRVLREVAENHTFDKLLAMPEIMRFIDRDETLSKLF 272 +LV+L V +G V +D+ +RPF+RLQS XXXXXXXXXXXXXXXXXXXXXXXXX +P+ + +L + K +P+++F +N+KGF+ +L N +IQHR+L++ PLL A GF QI G+R NDE QT F+ G+ +L A +AF K+ +P + T+AKMAA +P IQ+LF+RA+AG+ AVEELQD F + H+ G++ + RE+ + H DK MPE+M FI +D +L+K F Sbjct: 12 LLVVLAVFMGCTVHAQEHDRSSRPFSRLQSXXXXXXXXXXXXXXXXXXXXXXXXXXF--------------TKPSSRAGYLLNLTKNTFNPVQVFKDAMNTKGFKAILDNPDIQHRVLKDFPLLGALTGFSTIKDNRRLSAEEVRWQIRGKRRRKREGNLIYGRGNDETLNAQTKNSFSTGMNTLLNLADDAFFNKVNEPDKVSATLAKMAASSDPGIQNLFKRARAGEQGAVEELQDEFVNQHYSGMDGKAFREITKQHNGDKFKQMPEMMHFIQKDASLAKAF 282
BLAST of NO10G01650 vs. NCBI_GenBank
Match: EWM24107.1 (hypothetical protein Naga_100286g4 [Nannochloropsis gaditana]) HSP 1 Score: 126.7 bits (317), Expect = 1.300e-25 Identity = 64/174 (36.78%), Postives = 101/174 (58.05%), Query Frame = 0 Query: 91 RPNEKVKFLQKMAKGNVDPMELFTRGVNSKGFQVLLKNVEIQHRILEEMPLLAAFDGFRQIMGRRLNDEQTAEGFTRGVQNILTFAKEAFVKIKDPQQTVNTIAKMAADPNPAIQDLFRRAQAGDSKAVEELQDVFNDLHFPGVNVRVLREVAENHTFDKLLAMPEIMRFIDRD 265 +P+ ++ +Q K +D M+LF S G + +L +VE QH+I+E +PLLAAFDGF++I GRRL+D T GFT G+ +IL + +KDP + ++++ A+ I + F A AGD A++ + + N +PGVN VL+ V+ + K+ EIMR I+ D Sbjct: 52 KPDAELTMMQDTWKNGLDIMKLFETSFASPGMKAILDDVETQHKIMENLPLLAAFDGFKEITGRRLDDAGTTAGFTAGLNSILKTLPDMLKTMKDPSISTRALSELLAEDANNISEAFAAASAGDGGAMDTVNEALNKKLYPGVNTDVLKTVSASDPLSKVTGNNEIMRLINDD 225
BLAST of NO10G01650 vs. NCBI_GenBank
Match: XP_005853961.1 (hypothetical protein NGA_0461700 [Nannochloropsis gaditana CCMP526] >EKU22395.1 hypothetical protein NGA_0461700 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 126.3 bits (316), Expect = 1.700e-25 Identity = 64/174 (36.78%), Postives = 101/174 (58.05%), Query Frame = 0 Query: 91 RPNEKVKFLQKMAKGNVDPMELFTRGVNSKGFQVLLKNVEIQHRILEEMPLLAAFDGFRQIMGRRLNDEQTAEGFTRGVQNILTFAKEAFVKIKDPQQTVNTIAKMAADPNPAIQDLFRRAQAGDSKAVEELQDVFNDLHFPGVNVRVLREVAENHTFDKLLAMPEIMRFIDRD 265 +P+ ++ +Q K +D M+LF S G + +L +VE QH+I+E +PLLAAFDGF++I GRRL+D T GFT G+ +IL + +KDP + ++++ A+ I + F A AGD A++ + + N +PGVN VL+ V+ + K+ EIMR I+ D Sbjct: 52 KPDGELTMMQDTWKNGLDIMKLFETSFASPGMKAILDDVETQHKIMENLPLLAAFDGFKEITGRRLDDAGTTAGFTAGLNSILKTLPDMLKTMKDPSISTRALSELLAEDANNISEAFAAASAGDGGAMDTVNEALNKKLYPGVNTDVLKTVSASDPLSKVTGNNEIMRLINDD 225
BLAST of NO10G01650 vs. NCBI_GenBank
Match: XP_005854240.1 (hypothetical protein NGA_0024302 [Nannochloropsis gaditana CCMP526] >EKU22120.1 hypothetical protein NGA_0024302 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 91.3 bits (225), Expect = 5.900e-15 Identity = 47/101 (46.53%), Postives = 64/101 (63.37%), Query Frame = 0 Query: 85 GFNQPLRPNEKVKFLQKMAKGNVDPMELFTRGVNSKGFQVLLKNVEIQHRILEEMPLLAAFDGFRQIMGRRLNDEQTAEGFTRGVQNIL----TFAKEAFV 182 G P+ K F QK+ K +D +ELF SK F+ +L+NVEIQHRI+E +P+L A GFR+ GRRL D++T GF++GV+N+L T AK A V Sbjct: 67 GLFDPVGSPGKSAFFQKVKKDGIDSVELFETLFKSKAFESILENVEIQHRIIEGVPILGAVSGFREARGRRLTDQETTAGFSKGVRNLLEMFKTSAKHALV 167 The following BLAST results are available for this feature:
BLAST of NO10G01650 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 7
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO10G01650 ID=NO10G01650|Name=NO10G01650|organism=Nannochloropsis oceanica|type=gene|length=1814bpback to top protein sequence of NO10G01650.1 >NO10G01650.1-protein ID=NO10G01650.1-protein|Name=NO10G01650.1|organism=Nannochloropsis oceanica|type=polypeptide|length=318bpback to top protein sequence of NO10G01650.2 >NO10G01650.2-protein ID=NO10G01650.2-protein|Name=NO10G01650.2|organism=Nannochloropsis oceanica|type=polypeptide|length=314bpback to top Synonyms
Publications
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